New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 781222	60 (0.770)	9 (0.120)	7/554	5.6	12.5%	noncoding (76/76 nt)	lysY	tRNA‑Lys
	?	NC_000913	2521485 =	70 (0.960)					intergenic (+157/+108)	lysV/xapR	tRNA‑Lys/DNA‑binding transcriptional activator XapR
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

ATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCG‑‑CAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTT‑AACATC‑AAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGA‑GTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGAC  >  NC_000913/780927‑781514                                                                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                                                                          aTCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCG‑‑CAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGttt                                                                                                                                                                                                                                                                                                       >  1:71541/1‑300 (MQ=255)           gATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCCCTCCTGACGGTGGGCTCGACGGAAGCCCTTTGTAGTATCCAGCG‑‑CCGTATCGGGTGATTAGCTCAGCTAGGAGAGCACCCCCCCCACCAGGCGGAGGTAGGCGGTGCGATCACGTCATCACCAAATAGGCGGGTGGTTAGTTTGGTTGGTAGAGGAGTTGACTTTTGAGCAATTGGTTGCAGGTTCGACTCCTGCATGACCCACCAGTTTT‑AAAATC‑aaa                                                                                                                                                                                                                                                                                           >  2:515807/1‑300 (MQ=16)             tGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCG‑‑CCGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCAGTCATCAACCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCCGTTTT‑AACATC‑AAACt                                                                                                                                                                                                                                                                                         >  2:1165/1‑300 (MQ=255)                          ggATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCG‑‑CAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTAGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCCATTTC‑AACATC‑AAACTCAAATGTTAAGc                                                                                                                                                                                                                                                                             >  1:313924/1‑299 (MQ=255)                          ggATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGAACCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCG‑‑CAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTT‑AACATC‑AAACTCAGATGGTAAGc                                                                                                                                                                                                                                                                             >  1:325703/1‑299 (MQ=255)                                       tCAGCAACGGCCCTTAGTGCGAGCGAAGCGAGTCATTCTGCACGACCCACCACTAATGACGTTTGGTTCGGTGGGAGTAGGTTGTAGTATCCAGCG‑‑CAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTT‑AACATC‑AAACTCAGATGTTAAGCGTGAAGGATAACGt                                                                                                                                                                                                                                                               <  1:254310/300‑1 (MQ=255)                                                                    gaGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCG‑‑CAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAAtttcaaaacccacctcaaa                                                                                                                                                                                                                                                                                       >  1:404042/1‑233 (MQ=255)                                                                    gaGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATACAGCG‑‑CAGTATCGGGTGATTAGCTCCGCTGAGAGAGCACCTACCTTACAAGGAGGGGGTAGGCGGTTCGATCCAGTCATCACCCACCCCTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGAACCAACAGTTTT‑AACATC‑CAACCCAGATGTTAAGCGTGAAGGATAACGTTGCGCAAGCAACGGca                                                                                                                                                                                                                                               >  1:551716/1‑286 (MQ=18)                                                                    gaGTCATCCTGCACGACCCACCACTAATGACGGTGGATTCGGTGGAAGTAGTTCGTAGTATCCAGCG‑‑CAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTT‑AAAATC‑AAACTCAGATGTTAATCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGGAGGgc                                                                                                                                                                                                                                       >  2:312495/1‑295 (MQ=255)                                                                         aTCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCG‑‑CAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGAACCACCAGTTTT‑AACATC‑AAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCAAGCACCGGCACATAGGGCGag‑cgaag‑c                                                                                                                                                                                                                            >  1:388320/1‑299 (MQ=255)                                                                         aTCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCG‑‑CAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAATCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTT‑AAAATC‑aaccccagccgttaa                                                                                                                                                                                                                                                                               >  2:106343/1‑237 (MQ=18)                                                                         aTCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGAAAGTAGTTTGTCGTATCCAGCG‑‑CAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTACCTTCCAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCGACCACCAATCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAACTTC‑AACATC‑accacc                                                                                                                                                                                                                                                                                        >  2:335689/1‑236 (MQ=17)                                                                                   aCCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCG‑‑CAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACccaccaa                                                                                                                                                                                                                                                                                                          <  2:339665/215‑2 (MQ=255)                                                                                   aCCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCG‑‑CAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCATTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTT‑AACATC‑AAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCt                                                                                                                                                                                                                  >  2:287932/1‑299 (MQ=255)                                                                                   aCCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCG‑‑CAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCCCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACccaccaa                                                                                                                                                                                                                                                                                                          >  1:339665/1‑214 (MQ=255)                                                                                       accacTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCG‑‑CAGTAGCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCTTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTT‑AACATC‑GAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCAc                                                                                                                                                                                                              <  1:616032/299‑1 (MQ=255)                                                                                        ccacTAATGACGGTGGGTTCGGTGGAGGTAGTTTGTAGTATCCAGCG‑‑CAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTT‑AACATC‑AAACTCAGACGTTAAGCGTGAAGGATAACGTTGAGCAAGCAAAGGCCCGCAGGACGAG‑CGAAG‑CGCGTCATCCCGCACGa                                                                                                                                                                                                            >  2:545348/1‑300 (MQ=17)                                                                                          acTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCG‑‑CAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCTTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTT‑AACATC‑AAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGAc                                                                                                                                                                                                           <  1:478307/299‑1 (MQ=255)                                                                                            taatacctctttttgcgttGGAAGTAGTGGTTAGTATCCAGCG‑‑CAGTATCGGGTGATTAGCTCAGCTGGGAAAGCACCTCCCTTACAAGGAGGGGGTTGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTT‑AACATC‑AAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCAc                                                                                                                                                                                                              <  2:617135/276‑1 (MQ=14)                                                                                                    gTGGGTTCGGGGGAAGTAGTTTGTAGTATCCAGCG‑‑CAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAATCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTT‑AACATC‑AAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCAc                                                                                                                                                                                                              <  1:41700/286‑1 (MQ=255)                                                                                                      gggTTCGGTGGAAGTAGTTTGTAGTATCCAGCG‑‑CAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAAtttcaaaagccaacccaga                                                                                                                                                                                                                                                                                       >  2:419259/1‑199 (MQ=255)                                                                                                        gttccgtataaGTAGTTTGGGGTATTCAGCG‑‑CGGTGGTGGGGGATTAGATCAGCTGGGAGGAAAACTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGGCAGCAACCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTT‑AACATC‑AAATTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCAACCTTAAAg                                                                                                                                                                                            <  1:313703/291‑1 (MQ=14)                                                                                                            ggTGGAAGTAGTTTGTAGTATCCAGCG‑‑CAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTT‑AACATC‑AAACTCAGATGTTAAGCGTGAAGAATAACGTTGCGCCAGCAACGGCCCGt                                                                                                                                                                                                                                            >  2:361139/1‑250 (MQ=255)                                                                                                                ggagtgagttGTAGTATCCAGCG‑‑TAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGTAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTT‑AACATC‑AAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGccc                                                                                                                                                                                    <  1:327630/292‑1 (MQ=255)                                                                                                                 aaGTAGTTTGTAGTATCCAGCG‑‑CAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTA‑AAGGTGGTTACT‑GGTAGAGAA‑CGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACccaccatcctgaatgattaaggc                                                                                                                                                                                    <  1:596633/300‑18 (MQ=11)                                                                                                                  agtgggttGTAGTATCCAGCG‑‑TAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAg                                                                                                                                                                                                                                                                                                          <  1:95225/178‑1 (MQ=2)                                                                                                                     agtTTGTAGTATCCAGCG‑‑CAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTT‑AACATC‑AAACTCAGATGTTCAGCGTGAAGGATAAAGTTGTGCAAGCAACGGCCCGTAGGGAGAG‑CGGGG‑CGAGTCATTCTGAACGAACCACAAATTTTAAAGAGTGGcacagagt                                                                                                                                                                               >  2:49587/1‑293 (MQ=14)                                                                                                                     agtTTGTAGTATCCAGCG‑‑CAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTT‑AACATC‑AAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGA‑Gt                                                                                                                                                                              >  1:484117/1‑300 (MQ=255)                                                                                                                     agtTTGTAGTATCCAGCG‑‑CAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTT‑AACATC‑AAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCACGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGA‑Gt                                                                                                                                                                              >  1:484214/1‑300 (MQ=255)                                                                                                                          gtagtaTCCAGCGTAGAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTACCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTGAACATC‑AAACTCAGATGTTAAGCGTGAAGGATACCGTTGCGCCAGCAACGGCCCGTAGGGCGag‑cgaag‑cgaaggtc                                                                                                                                                                                                                     >  1:206490/1‑255 (MQ=14)                                                                                                                          gtagtaTCCAGCG‑‑CAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTT‑AACATC‑AAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTAATCCTGCACGAACCACCAATCTTAAAGATTGGCACCGA‑GTaaaaa                                                                                                                                                                         >  1:554810/1‑300 (MQ=255)                                                                                                                          gtagtaTCCAGCG‑‑CAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTT‑AAAATC‑AAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCCGCACGACCCACCAATCTTAAAGATTGGCAACGA‑GTagaaa                                                                                                                                                                         >  2:6300/1‑300 (MQ=255)                                                                                                                                    gcg‑‑cAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTT‑AACATC‑AAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGA‑GTAAAAATCTTTCAGGt                                                                                                                                                               >  2:569851/1‑300 (MQ=255)                                                                                                                                    gcg‑‑cAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCAACCAGTTTT‑AACATC‑AAACTCAGACGTTAAGCGTGAAGGATACCGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑TGAAG‑CGAGTCATCCTGCACGACCCACCACTCTTa                                                                                                                                                                                               >  2:393619/1‑269 (MQ=255)                                                                                                                                           gTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGtgtcaacacacaccccaga                                                                                                                                                                                                                                                                                       >  2:608793/1‑162 (MQ=11)                                                                                                                                           gTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGAACCACCAGTTTT‑AACATC‑AAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGA‑GTAAAAATCTTTCAGGTAacac                                                                                                                                                          >  1:54331/1‑300 (MQ=255)                                                                                                                                            tATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACNACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTT‑AACATC‑AAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGA‑GTAAAAATCTTTCAGGTAACAcc                                                                                                                                                         <  1:441273/300‑1 (MQ=255)                                                                                                                                            tATCGGGTGATGAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGATGGGTTCGGCGGTTCGATCCCGTCATCACCCACCACTCGTTTCGTTAGCTCAGTTGGTAGAGCACTTGACTTTTAATCAGTTGGTCGCAGCTTCGAATCCTGCACGACCCGCTAGTTTT‑AACACC‑AAACTCAGAGGTTAAGCGTGAGGGATAACGGTGCGCCAGAAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGA‑GTAAAAATCTTTCAGGTAACAcc                                                                                                                                                         <  2:500758/300‑1 (MQ=17)                                                                                                                                                   tGATTAGCTCAGCTGGGAGAGCACCTCCCCTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCATCCACCACTCTGGTCGTTAGCTCAGTTGTTAGAGCAGTTGACTTTTGATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTT‑AACATC‑AAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGA‑GTAAAAATCTTTCAGGTAACACCCGTATgg                                                                                                                                                  <  2:289856/300‑1 (MQ=255)                                                                                                                                                    gATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTT‑AACATC‑AAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGA‑GTAAAAATCTTTCAGGTAACACCCGTATggg                                                                                                                                                 <  1:569851/300‑1 (MQ=255)                                                                                                                                                             aGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTT‑AACATC‑AAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGA‑GTAAAAATCTTTCAGGTAACACCCGTAt                                                                                                                                                    <  2:573723/288‑1 (MQ=255)                                                                                                                                                             aGCTGGGAGAGCAACTCCCTTAAAAGGAGGGGGTCTGTGGTTCGATCCCTTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGTTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTT‑AACATC‑AAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGA‑GTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGc                                                                                                                                         <  1:248465/299‑1 (MQ=255)                                                                                                                                                                         aCCTCCCTTACAAGGAGGGGGTCGGCGGTTCGCTCCCTTCATCACCCACCAC‑CGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTT‑AACATC‑AAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGA‑GTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGc                                                                                                                           <  2:383451/300‑1 (MQ=255)                                                                                                                                                                            tCCCCTACGAGGAGGGGGTCGGCGGTTCGATCCCTTCACCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAACCCTGCACGACCCACCAGGTGT‑AACATC‑AAACTCAGGTGGTAAGAGTGAACGGGAACGTTGAGACAGAAACGGCCCGTAGGGCGAG‑CGGAG‑CGAGTCAATCTGTAAGAGCAACCACCCTGAAAGAATGGCCCCGATGAAAAAACCTTTC‑GGTAACCCCCCGATGGGTCGTTAGCTCAGTTGGTAGAGc                                                                                                                           <  1:14158/298‑1 (MQ=9)                                                                                                                                                                                         gggtgtctgcggTTCGATCCCTTCATCACCCACCACTCTGTTCGTTAGCTCAGTTGTTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTT‑AACATC‑AAATGCAGGTGGTAAGATGGAGGGAGGACGTTGAGACAGCAACAGTACGTAGGGAGAG‑TGAAA‑TGAGTCAACCTGTGAGACCAACCAACCTGAAAGGGGGGCCTCGG‑CGAAAAAGTTCTCAGGTAACACACGGATGGGTCGTTAGCTCAGTTGTTAGAGc                                                                                                                           <  1:14165/277‑1 (MQ=2)                                                                                                                                                                                         gggggTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTT‑AACATC‑AAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGA‑GTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATc                                                                                                            <  1:287932/300‑1 (MQ=255)                                                                                                                                                                                                             cGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTT‑AACATC‑AAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGACCAGC‑GTAACCCTTTTTCCGGTCACACCCGTATGGGTAGTTAGCTCAGTTGGTAGAGCAGTTGACCTTTAATTAGTTGGTCGCAGGTTCGAAt                                                                                        >  2:584302/1‑300 (MQ=18)                                                                                                                                                                                                             cGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTT‑AACATC‑AAACTCAGATGTTAAGCGTGAAGGACAACGTTGCGCAAGCAACGGCCCGTAGGgc                                                                                                                                                                                                                                       >  2:498001/1‑160 (MQ=255)                                                                                                                                                                                                             cGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTT‑AACATC‑AAACTCAGATGCTAAGCGTGAAGGATAACGTTGCGCAAGCAACGGCCAGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCACCGA‑GTAAAAATCTTTCCGGTACCCCCCTTATGGGTAGTTAGCTCAGTTGGTCGAACAGTCAACTTCTAATCAATTGGTCGCAGGTTCGAAt                                                                                        >  2:584259/1‑300 (MQ=18)                                                                                                                                                                                                               tcatcaCCCACCGCTCTGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGTTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTT‑AACATC‑AAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGA‑GTAAAAATCTTTCATGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTCCGAATcc                                                                                      <  1:47003/300‑1 (MQ=255)                                                                                                                                                                                                                 accaaccaacacccGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTT‑AACATC‑AAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAggg                                                                                                                                                                                                                                        <  1:333250/142‑1 (MQ=255)                                                                                                                                                                                                                    acccaccACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTC‑AACATC‑aaccccaga                                                                                                                                                                                                                                                                                     >  2:527898/1‑100 (MQ=11)                                                                                                                                                                                                                    aaccaacaatCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGGCCCACCAGTTTT‑AACATC‑AAACGCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCAATCTTAAAg                                                                                                                                                                                            <  1:416844/185‑1 (MQ=255)                                                                                                                                                                                                                        accacTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTT‑AACATC‑AAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGA‑GTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGAc                                                                              <  1:137614/299‑1 (MQ=255)                                                                                                                                                                                                                        aacaatCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTT‑AACATC‑AAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGA‑GTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGc                                                                                                                           <  1:14286/249‑1 (MQ=255)                                                                                                                                                                                                                           acTCTGGTCGTTAGCTTAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTT‑AACATC‑AAACTCAGATGTTAAGCGTGAAGGATGACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGATTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGA‑GTAAAAATCTTTCAGGTAACACCCGTATGGTTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGAc                                                                              <  2:206490/296‑1 (MQ=255)                                                                                                                                                                                                                                   cGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTT‑AACATC‑AAACTCAGATGTTCAGCGTGAAGGATACCGTTACGCAAGCAACGGCCCATAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCAAGA‑GTAAAGATCTTTCAGGTAACACCCGTATGGGNCGTTAGCTCAGTTGGTCGAGCAGTTGACTTTTACTCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTaa                                                                  >  1:125400/1‑300 (MQ=25)                                                                                                                                                                                                                                      tAGCTCAGTTGTTAGAGCAGTCGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTT‑AACATC‑AAACTCAGATNTTAAGCGTTAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCAAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGA‑GTGGAAATCTTTCAGTTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAgg                                                               <  2:484214/300‑1 (MQ=255)                                                                                                                                                                                                                                       aGCTCAGTTGTTAGAGCAGTTGACTTTTAATCAATTGTTCGCAGGTTCGGATCCTGCACGACCCACCAGTTTT‑AACATC‑AAACTCAGATNTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGACCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCAATCTTAAAGATGGGCCCCGA‑GGAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAgg                                                               <  2:484117/299‑1 (MQ=255)                                                                                                                                                                                                                                               tGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTT‑AACATC‑AAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCATAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGAccacccaa                                                                                                                                                                                                    >  2:306912/1‑153 (MQ=255)                                                                                                                                                                                                                                                                                                   aCCCACCAGTTTT‑AACATC‑AAACTCAGATGTTAAGCGTTAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGA‑GTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTag                                                  <  2:543037/252‑1 (MQ=255)                                                                                                                                                                                                                                                                                                   aCCCACCAGTTTT‑AACATC‑AAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGA‑GTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTag                                                  <  2:543030/252‑1 (MQ=255)                                                                                                                                                                                                                                                                                                   aCCCACCAGTTTT‑AACATC‑AAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGA‑GTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTag                                                  >  1:543030/1‑252 (MQ=255)                                                                                                                                                                                                                                                                                                   aCCCACCAGTTTT‑AACATC‑AAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGA‑GTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTag                                                  >  1:543037/1‑252 (MQ=255)                                                                                                                                                                                                                                                                                                   aCCCACCAGTTTT‑AACATC‑AAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGA‑GTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGAc  >  1:588019/1‑300 (MQ=255)                                                                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                                                                          ATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCG‑‑CAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTT‑AACATC‑AAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGA‑GTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGAC  >  NC_000913/780927‑781514

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.