| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_012971 | 788,122 | A→G | intergenic (+62/‑3) | lom → / → ECD_RS23105 | outer membrane beta‑barrel protein Lom/prophage tail fiber N‑terminal domain‑containing protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_012971 | 788,122 | 0 | A | G | 91.7% | 115.0 / ‑3.2 | 36 | intergenic (+62/‑3) | lom/ECD_RS23105 | outer membrane beta‑barrel protein Lom/prophage tail fiber N‑terminal domain‑containing protein |
| Reads supporting (aligned to +/- strand): ref base A (1/2); new base G (22/11); total (23/13) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.39e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TCGTTGTTGATATTGCTTATGAAGGCTCCGGCAGTGGCGACTGGCGTACTGACGGATTCATCGTTGGGGTCGGTTATAAATTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGAACCGGTGGGCTTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGAGTCCTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACCATTCAGCTGAAAGCCAGACGTAACAGCACCACGGTGGTGGTGAACACGGTGGGCTCAGAGAATCCGGATGAAGCCGGGCGTTACAGCATGGATGTGGAGTACGGTCAGTACAGTGTCATCCTGCAGGTTGACGGTTTTCCACCATCGCACGCCGGGACCATCACCGTGTATGAAGATTCACAACCGGGGACGCTGAATGATTTTCTCTGTGCCATGACGGAGGATGATGCCCG > NC_012971/787975‑788420 | tggccattgaccttgcttatgaaggtTCCGGCAGTGGTGACTGGCGCACTGACGGTTTCATCGTGGGGGTCGGTTATAAATTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAgcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctctgaaaatccggatgaagccgggcgttac > 2:22090‑M2/13‑156 (MQ=255) gccatttaccttgcgtatgaagGTTCCGGCAGTGGTGACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAATTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAgcagtaaaaanctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctctgaaaatccggatgaagccgggcgttacag > 2:575062‑M2/11‑154 (MQ=255) attgaccttgcttatgAAGGTTCCGGCAGTGGTGACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAATTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAgcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctctgaaaatccggatgaagccgggcgttacagcat > 1:79686‑M2/8‑151 (MQ=255) ttATGAAGGTTCCGGCAGTGGTGACTGGCGCACGGACGGTTTCATCGTGGGTGTCGGTTATAAATTCTGATTAGCCANGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAgcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcactacggtactggtgaacacggtagcctctgaaaatccggatgaagccgggcgttacagcatggatgtcgag > 1:154344‑M2/1‑140 (MQ=255) ttcCGGCAGTGGTGACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAATTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAgcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccaaggtactggtgaacacggtagcatatgaaaatccggatgaagccgggcgttacagcatggatgtcgagtatggcaagt < 2:755412‑M2/299‑170 (MQ=255) ggCAGTGGTGACTTGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAATTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCNCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAgcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctctgaaaatccggatgaagccgggcgttacagcatggatgtcgagtatggccagtac > 2:627309‑M2/1‑127 (MQ=255) ggCAGTGGTGACTTGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAATTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAgcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctctgaaaatccggatgaagccgggcgttacagcatggatgtcgagtatggccagtac > 2:805674‑M2/1‑127 (MQ=255) ggCAGTGGTGACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAATTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAgcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctctgaaaatccggatgaagccgggcgttacagcatggatgtcgagtatggccagtac > 2:805424‑M2/1‑127 (MQ=255) ggCAGTGGTGACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAATTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAgcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctctgaaaatccggatgaagccgggcgttacagcatggatgtcgagtatggccagtac > 1:72106‑M2/1‑127 (MQ=255) ggCAGTGGTGACTGGCGCACTGACGGGTTCAGCGTGGGTGTCGGTGATAAATTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCNCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAgcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctctgaaaatccggatgaagccgggcgttacagcatggatgtcgagtatggccagtac > 2:627299‑M2/1‑127 (MQ=255) aGTGGTGACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAATTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAgcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctctgaaaatccggatgaagccgggcgttacagcatggatgtcgagtatggccagtacagcgt > 2:702314‑M2/1‑124 (MQ=255) gtggtgACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAATTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAgcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctctgaaaatccggatgaagcagggcgttacagcatggatgtcgagtatggcaagtacagcgtc < 2:95022‑M2/300‑178 (MQ=255) tgaCTGGCGCACTGACTGTTTCATCGTGGGTGTCGGTTATAAATTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAgcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccantacagaactgcactattcaactgaaggcaaagngtaacagcaccacggtactggtgaacacggtagcctctgaaaatccggatgaagccgggcgttacagcatggatgtcgagtatggccagtacagcgtcaccc > 2:616661‑M2/2‑119 (MQ=255) cacTGACGGTTTCATCGTGGGTGTCGGTTATAAATTCTGATTAGCAAGGTAACACAGTGTTATGACGGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAgcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaataccgaactgcactcttcaactgaaggcaaagagtaacagcaccacggtactggtgaacacggtagcctctgaaaatccggatgaagccgggcgttacagcatggatgtcgagtatggccagtacagcgtcaacatgctggtt < 2:175014‑M2/298‑190 (MQ=255) gACGGTTTCATCGTGGGTGTCGGTTATAAATTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAgcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctctgaaaatccggatgaagccgggcgttacagcatggatgtcgagtatggccagtacagcgt > 1:542656‑M2/1‑106 (MQ=255) ttCATCGTGGGTGTCGGTTATAAATTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAgcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctctgaaantccggatgaagccgggcgttacagcatggatgtcgagtatggccagtacagcgtcaccctgctggttgaaggttttcc < 1:170990‑M2/300‑201 (MQ=255) cGGTTATAAATTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAgcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctctgaaaatccggatgaagccgggcgttacagcatggatgtcgagtatggccagtacagcgtcaacctgctggttgaaggttttccgccttcacatgca < 2:646520‑M2/299‑214 (MQ=255) ttCTGATGATCCGGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAgcagtaaaaatctcaggtgtgcttaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctctgaaaatccggatgaagccgggcgttacagcatggatgtcgagtatggccagtacaacgtcaccctgctggttgaaggttttccgccttcacatgccggaaccattac > 2:375969‑M2/1‑76 (MQ=255) tGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAgcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctctgaaaatccggatgaagccgggcgttacagcatggatgtcgagtatggccagtacagcgtcaccctgctggttgaaggttttccgccttcacatgccggaaccattaccg > 1:242031‑M2/1‑73 (MQ=255) gATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGATTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAgcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctctgaaaatccggatgaagccgggcgttacagcatggatgtcgagtatggccagtacagcgtaaccctgctggttgaaggttttccgccttcacatgccggaaccattaccgtc > 1:665674‑M2/1‑72 (MQ=255) gCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAgcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctctgaaaatccggatgaagccgggcgttacagcatggatgtcgagtatggccagtacagcgtcaccctgctggttgaaggttttccgccttcacatgccggaaccattaccgtctatga < 1:695551‑M2/300‑234 (MQ=255) aGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGGGTGGATATGGCAgcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctctgaaaatccggatgaagccgggcgttacagcatggatgtcgagtatggccagtacagcgtcaccctgctggttgaaggttttccgccttcacatgccggaaccattaccgtctatgaa > 1:751072‑M2/1‑64 (MQ=255) aGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAgcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctctgaaaatccggatgaagccgggcgttacagcatggatgtcgagtatggccagtacagcgtcaccctgcttgttgaaggttttccgccttcacatgccggaaccattaccgtctatgaa < 1:319081‑M2/298‑235 (MQ=255) aGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAgcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctctgaaaatccggatgaagccgggcgttacagcatggatgtcgagtatggccagtacagcgtcaccctgctggttgaaggttttccgccttcacatgccggaaccattaccgtctatgaagg > 1:549778‑M2/1‑64 (MQ=255) aGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAgcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctctgaaaatccggatgaagccgggcgttacagcatggatgtcgagtatggccagtacagcgtcaccctgctggttgaaggttttccgccttcacatgccggaaccattaccgtctatgaa > 1:649036‑M2/1‑64 (MQ=255) aGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAgcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctctgaaaatccggatgaagccgggcgttacagcatggatgtcgagtatggccagtacagcgtcaccctgctggttgaaggttttccgccttcacatgccggaaccattaccgtctatgaa > 2:44941‑M2/1‑64 (MQ=255) gTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAgcagtaaaaatctaaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgacggcaaagcgtaacagcaccagggtactggtgaacacggtagcctctgaaaatccggatgaagccgggcgttacagcatggatgtcgagtatggccagtacagcgtcaccctgctggttgaaggttttccgccttcacatgccggaaccattaacgtatatgaaggtt < 2:206416‑M2/300‑239 (MQ=255) aGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAgcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctctgaaaatccggatgaagccgggcgttacagcatggatgtcgagtatggccagtacagcgtcaccctgctggttgaaggttttccgccttcacatgccggaaccattaccgtctatgaaggttccagacc > 1:89806‑M2/1‑55 (MQ=255) aGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAgcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctctgaaaatccggatgaagccgggcgttacagcatggatgtcgagtatggccagtacagcgtcaccctgctggttgaaggttttccgccttcacatgccggaaccattaccgtctatgaaggttccagac > 1:101413‑M2/1‑55 (MQ=255) gtgtTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAgcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctctgaaaatccggatgaagccgggcgttacagcatggatgtcgagtatggccagtacagcgtcaccctgctggttgaaggttttccgccttcacatgccggaaccattaacgtctatgaaggttccagacct < 1:99502‑M2/300‑247 (MQ=255) gtgtTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAgcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctctgaaaatccggatgaagcagggcgttacagcatggatgtcgagtatggccagtacagcgtcaccctgctggttgaaggttttccgacttcacatgccggaaccattaccgtctatgaaggttccagacct < 2:10682‑M2/300‑247 (MQ=255) ttATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAgcagtaaaaatctcaggtgtgctgaaagatggtggggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctctgaaaatccggatgaagccgggcgttacagcatggatgtcgagtatggccagtacagcgtcaccctgctggttgaaggttttccgccttcacatgccggaaccattaccgtctatgaaggttccagacctggta > 1:201264‑M2/1‑51 (MQ=255) gaagatatcgtaccggggccgtcagctccgaatatggcagcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctctgaaaatccggatgaagccgggcgttacagcatggatgtcgagtatggccagtacagcgtcaccctgctggttgaaggttttccgccttcacatgccggaaccattaccgtctatgaaggttccagacctggtacgctgaatg > 1:535885‑M2/30‑39 (MQ=255) gatatcgtaccggggccgtcagctccgaatatggcagcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctctgaaaatccggatgaagccgggcgttacagcatggatgtcgagtatggccagtacagcgtcaccctgctggttgaaggttttccgccttcacatgccggaaccattaccgtctatgaaggttccagacctggtacgctgaatgatttt < 1:617557‑M2/274‑265 (MQ=255) atatcgtaccggggccgtcagctccgaatatggcagcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctctgaaaatccggatgaagccgggcgttacagcatggatgtcgagtatggccagtacagcgtcaccctgctggttgaaggttttccgccttcacatgccggaaccattaccgtctatgaaggttccagacctggtacgctgaatgattttc < 1:11122‑M2/275‑266 (MQ=255) tatcgtaccggggccgtcagctccgaatatggcagcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctctgaaaatccggatgaagccgggcgttacagcatggatgtcgagtatggccagtacagcgtcaccctgctggttgaaggttttccgccttcacatgccggaac > 1:72330‑M2/25‑34 (MQ=255) tatcgtaccggggccgtcagctccgaatatggcagcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcatctgaaaatccggatgaagccgggcgttacagcatggatgtcgagtatggccagtacagcgtcaccctgctggttgaaggttttccgccttcacatgccggaac < 2:72330‑M2/228‑219 (MQ=255) tcgtaccggggccgtcagctccgaatatggcagcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcgctattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctctgaaaatccggatgaagccgggcgttacagcatggatgtcgagtatggccagtacagcgtcaccctgctggttgaaggttttccgccttcacatgccggaaccattaccgtctatgaaggttccagacctggtacgctgaatgattttctcg > 1:417302‑M2/23‑32 (MQ=255) tcgtaccggggccgtcagctccgaatatggcagcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctctgaaaatccggatgaagccgggcgttacagcatggatgtcgagtatggccagtacagcgtcaccctgctggttgaaggttttccgccttcacatgccggaaccattaccgtctatgaaggttccagacctggtacgctgaatgattttctcg > 1:417190‑M2/23‑32 (MQ=255) gtaccggggccgtcagctccgaatatggcagcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctctgaaaatccggatgaagccgggcgttacagcatggatgtcgagtatggccagtacagcgtcaccctgctggttgaaggttttccgccttcacatgccggaaccattaccgtctatgaaggttccagacctggtacgccgaatgattttctcggt < 1:227137‑M2/280‑271 (MQ=255) acctgtgccgtcagctccgaatatggcagcattaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcttaacagcaccacggtactggtgaacacggtagcctctgaaaatccggatgaagccgggcgttacagcatggatttcgagtatggccagtacagcgtcaccctgctggttgaaggttttccgcctccacatgccggaaccattaccgtctatgaaggttccagacctggtacgctgaatgattttctcggtgc > 2:167036‑M2/19‑28 (MQ=255) ggggccgtcagctccgaatatggcagcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctctgaaaatccggatgaagccgggcgttacagcatggatgtcgagtatggccagtacagcgtcaccctgctggttgaaggttttccgccttcacatgccggaaccattaccgtctatgaaggttccagacctggtacgctgaatgattttctcggtgccat < 2:73696‑M2/285‑276 (MQ=255) ggccgtcagctccgaatatggcagcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctctgaaaatccggatgaagccgggcgttacagcatggatgtcgagtatggccagtacagcgtcaccctgctggttgaaggttttccgccttcacatgccggaaccattaccgtctatgaaggttccagacctggtacgctgaatgattttctcggtgccatga > 1:483654‑M2/14‑23 (MQ=255) gctccgaatatGGCAgcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctctgaaaatcggatgaagccgggcgttacagcatggatgtcgagtatggccagtacagcgtcaccctgctggttgaaggttttccgccttcacatgccggaaccattaccgtctatgaaggttccagacctggtacgctgaatgattttctcggtgccatgaaggaagat < 2:783454‑M2/294‑285 (MQ=255) gctccgaatatGGCAgcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctctgaaaatccggatgaagccgggcgttacagcatggatgtcgagtatggccagtacagcgtcaccctgctggttgaaggttttccgccttcacatgccggaaccattaccgtctatgaaggttccagacctggtacgctgaatgattttctcggtgccatgacggaagat > 1:793356‑M2/6‑15 (MQ=255) gTGGATATGGCAgcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctctgaaaatccggatgaagccgggcgttacagcatggatgtcgagtatggccagtacagcgtcaccctgctggttgaaggttttccgccttcacatgccggaaccattaccgtctatgaaggttccagacctggtacgctgaatgattttctaggtgccatgacggaagatgat < 2:796282‑M2/300‑289 (MQ=255) gAATATGGCAgcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctatgaaaatccggatgaagccgggcgttacagcatggatgtcgagtatggccagtacagcgtcaccctgctggttgaaggttttccgccttcacatgccggaaccattaccgtctatgaaggttccagacctggtacgctgaatgattttctcggtgccatgacggaagatgatgt < 2:189752‑M2/300‑291 (MQ=255) gAATATGGCAgcagtaaaaatctaaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctatgaaaatccggatgaagccgggcgttacagcatggatgtcgagtatggccagtacagcgtcaccctgctggttgaaggttttccgccttcacatgccggaaccattaccgtctatgaaggttccagacctggtacgctgaatgattttctcggtgccatgaaggaagatgatgt < 2:186811‑M2/300‑291 (MQ=255) gAATAGGGCAgcattaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacgggattgtactatttaatggaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctccgaaaatccggatgaagccgggcgttacagcatggaggtcgagtatggccagtacagcgtcaccctgctggttgaaggttttccgccttcacatgccggaaccattaccgtctatgaaggttccagacctggtacgctgaatgattttctcggtgccatgacggaagatgatgt > 2:699105‑M2/1‑10 (MQ=255) | TCGTTGTTGATATTGCTTATGAAGGCTCCGGCAGTGGCGACTGGCGTACTGACGGATTCATCGTTGGGGTCGGTTATAAATTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGAACCGGTGGGCTTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGAGTCCTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACCATTCAGCTGAAAGCCAGACGTAACAGCACCACGGTGGTGGTGAACACGGTGGGCTCAGAGAATCCGGATGAAGCCGGGCGTTACAGCATGGATGTGGAGTACGGTCAGTACAGTGTCATCCTGCAGGTTGACGGTTTTCCACCATCGCACGCCGGGACCATCACCGTGTATGAAGATTCACAACCGGGGACGCTGAATGATTTTCTCTGTGCCATGACGGAGGATGATGCCCG > NC_012971/787975‑788420 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |