Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_012971	767940	788118	20179	86 [0]	[32] 33	ECD_RS03870–lom	ECD_RS03870,ECD_RS03875,ECD_RS03880,ECD_RS03885,ECD_RS03890,ECD_RS03895,ECD_RS03900,ECD_RS03905,ECD_RS03910,ECD_RS03915,ECD_RS03920,ECD_RS03925,ECD_RS03930,gpG,ECD_RS03940,ECD_RS03945,ECD_RS03950,ECD_RS03955,ECD_RS03960,ECD_RS03965,gpJ,lom

TCGTTGTTGATATTGCTTATGAAGGCTCCGGCAGTGGCGACTGGCGTACTGACGGATTCATCGTTGGGGTCGGTTATAAATTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGAACCGGTGGGCTTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGAGTCCTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACCATTCAGCTGAAAGCCAGACGTAACAGCACCACGGTGGTGGTGAACACGGTGGGCTCAGAGAATCCGGATGAAGCCGGGCGTTACAGCATGGATGTGGAGTACGGTCAGTACAGTGTCATCCTGCAGGTTGACGGTTTTCCACCATCGCACGCCGGGACCATCACCGTGTATGAAGATTCACAACCGGGGACGCTGAATGATTTTCTCTGTGCCATGACGGAGGATGATGCC  >  NC_012971/787975‑788418                                                                                                                                                 |                                                                                                                                                                                                                                                                                                            tggccattgaccttgcttatgaaggtTCCGGCAGTGGTGACTGGCGCACTGACGGTTTCATCGTGGGGGTCGGTTATAAATTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAgcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctctgaaaatccggatgaagccgggcgttac                                                                                                                                                  >  2:22090‑M2/13‑156 (MQ=255)   gccatttaccttgcgtatgaagGTTCCGGCAGTGGTGACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAATTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAgcagtaaaaanctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctctgaaaatccggatgaagccgggcgttacag                                                                                                                                                >  2:575062‑M2/11‑154 (MQ=255)      attgaccttgcttatgAAGGTTCCGGCAGTGGTGACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAATTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAgcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctctgaaaatccggatgaagccgggcgttacagcat                                                                                                                                             >  1:79686‑M2/8‑151 (MQ=255)                 ttATGAAGGTTCCGGCAGTGGTGACTGGCGCACGGACGGTTTCATCGTGGGTGTCGGTTATAAATTCTGATTAGCCANGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAgcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcactacggtactggtgaacacggtagcctctgaaaatccggatgaagccgggcgttacagcatggatgtcgag                                                                                                                                   >  1:154344‑M2/1‑140 (MQ=255)                          ttcCGGCAGTGGTGACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAATTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAgcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccaaggtactggtgaacacggtagcatatgaaaatccggatgaagccgggcgttacagcatggatgtcgagtatggcaagt                                                                                                                         <  2:755412‑M2/299‑170 (MQ=255)                              ggCAGTGGTGACTTGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAATTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCNCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAgcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctctgaaaatccggatgaagccgggcgttacagcatggatgtcgagtatggccagtac                                                                                                                       >  2:627309‑M2/1‑127 (MQ=255)                              ggCAGTGGTGACTTGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAATTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAgcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctctgaaaatccggatgaagccgggcgttacagcatggatgtcgagtatggccagtac                                                                                                                       >  2:805674‑M2/1‑127 (MQ=255)                              ggCAGTGGTGACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAATTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAgcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctctgaaaatccggatgaagccgggcgttacagcatggatgtcgagtatggccagtac                                                                                                                       >  2:805424‑M2/1‑127 (MQ=255)                              ggCAGTGGTGACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAATTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAgcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctctgaaaatccggatgaagccgggcgttacagcatggatgtcgagtatggccagtac                                                                                                                       >  1:72106‑M2/1‑127 (MQ=255)                              ggCAGTGGTGACTGGCGCACTGACGGGTTCAGCGTGGGTGTCGGTGATAAATTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCNCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAgcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctctgaaaatccggatgaagccgggcgttacagcatggatgtcgagtatggccagtac                                                                                                                       >  2:627299‑M2/1‑127 (MQ=255)                                 aGTGGTGACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAATTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAgcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctctgaaaatccggatgaagccgggcgttacagcatggatgtcgagtatggccagtacagcgt                                                                                                                  >  2:702314‑M2/1‑124 (MQ=255)                                  gtggtgACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAATTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAgcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctctgaaaatccggatgaagcagggcgttacagcatggatgtcgagtatggcaagtacagcgtc                                                                                                                 <  2:95022‑M2/300‑178 (MQ=255)                                      tgaCTGGCGCACTGACTGTTTCATCGTGGGTGTCGGTTATAAATTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAgcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccantacagaactgcactattcaactgaaggcaaagngtaacagcaccacggtactggtgaacacggtagcctctgaaaatccggatgaagccgggcgttacagcatggatgtcgagtatggccagtacagcgtcaccc                                                                                                             >  2:616661‑M2/2‑119 (MQ=255)                                               cacTGACGGTTTCATCGTGGGTGTCGGTTATAAATTCTGATTAGCAAGGTAACACAGTGTTATGACGGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAgcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaataccgaactgcactcttcaactgaaggcaaagagtaacagcaccacggtactggtgaacacggtagcctctgaaaatccggatgaagccgggcgttacagcatggatgtcgagtatggccagtacagcgtcaacatgctggtt                                                                                                     <  2:175014‑M2/298‑190 (MQ=255)                                                   gACGGTTTCATCGTGGGTGTCGGTTATAAATTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAgcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctctgaaaatccggatgaagccgggcgttacagcatggatgtcgagtatggccagtacagcgt                                                                                                                  >  1:542656‑M2/1‑106 (MQ=255)                                                         ttCATCGTGGGTGTCGGTTATAAATTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAgcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctctgaaantccggatgaagccgggcgttacagcatggatgtcgagtatggccagtacagcgtcaccctgctggttgaaggttttcc                                                                                          <  1:170990‑M2/300‑201 (MQ=255)                                                                       cGGTTATAAATTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAgcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctctgaaaatccggatgaagccgggcgttacagcatggatgtcgagtatggccagtacagcgtcaacctgctggttgaaggttttccgccttcacatgca                                                                             <  2:646520‑M2/299‑214 (MQ=255)                                                                                 ttCTGATGATCCGGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAgcagtaaaaatctcaggtgtgcttaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctctgaaaatccggatgaagccgggcgttacagcatggatgtcgagtatggccagtacaacgtcaccctgctggttgaaggttttccgccttcacatgccggaaccattac                                                                  >  2:375969‑M2/1‑76 (MQ=255)                                                                                    tGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAgcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctctgaaaatccggatgaagccgggcgttacagcatggatgtcgagtatggccagtacagcgtcaccctgctggttgaaggttttccgccttcacatgccggaaccattaccg                                                                >  1:242031‑M2/1‑73 (MQ=255)                                                                                     gATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGATTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAgcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctctgaaaatccggatgaagccgggcgttacagcatggatgtcgagtatggccagtacagcgtaaccctgctggttgaaggttttccgccttcacatgccggaaccattaccgtc                                                              >  1:665674‑M2/1‑72 (MQ=255)                                                                                          gCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAgcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctctgaaaatccggatgaagccgggcgttacagcatggatgtcgagtatggccagtacagcgtcaccctgctggttgaaggttttccgccttcacatgccggaaccattaccgtctatga                                                         <  1:695551‑M2/300‑234 (MQ=255)                                                                                             aGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGGGTGGATATGGCAgcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctctgaaaatccggatgaagccgggcgttacagcatggatgtcgagtatggccagtacagcgtcaccctgctggttgaaggttttccgccttcacatgccggaaccattaccgtctatgaa                                                        >  1:751072‑M2/1‑64 (MQ=255)                                                                                             aGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAgcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctctgaaaatccggatgaagccgggcgttacagcatggatgtcgagtatggccagtacagcgtcaccctgcttgttgaaggttttccgccttcacatgccggaaccattaccgtctatgaa                                                        <  1:319081‑M2/298‑235 (MQ=255)                                                                                             aGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAgcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctctgaaaatccggatgaagccgggcgttacagcatggatgtcgagtatggccagtacagcgtcaccctgctggttgaaggttttccgccttcacatgccggaaccattaccgtctatgaagg                                                      >  1:549778‑M2/1‑64 (MQ=255)                                                                                             aGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAgcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctctgaaaatccggatgaagccgggcgttacagcatggatgtcgagtatggccagtacagcgtcaccctgctggttgaaggttttccgccttcacatgccggaaccattaccgtctatgaa                                                        >  1:649036‑M2/1‑64 (MQ=255)                                                                                             aGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAgcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctctgaaaatccggatgaagccgggcgttacagcatggatgtcgagtatggccagtacagcgtcaccctgctggttgaaggttttccgccttcacatgccggaaccattaccgtctatgaa                                                        >  2:44941‑M2/1‑64 (MQ=255)                                                                                               gTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAgcagtaaaaatctaaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgacggcaaagcgtaacagcaccagggtactggtgaacacggtagcctctgaaaatccggatgaagccgggcgttacagcatggatgtcgagtatggccagtacagcgtcaccctgctggttgaaggttttccgccttcacatgccggaaccattaacgtatatgaaggtt                                                    <  2:206416‑M2/300‑239 (MQ=255)                                                                                                      aGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAgcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctctgaaaatccggatgaagccgggcgttacagcatggatgtcgagtatggccagtacagcgtcaccctgctggttgaaggttttccgccttcacatgccggaaccattaccgtctatgaaggttccagacc                                             >  1:89806‑M2/1‑55 (MQ=255)                                                                                                      aGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAgcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctctgaaaatccggatgaagccgggcgttacagcatggatgtcgagtatggccagtacagcgtcaccctgctggttgaaggttttccgccttcacatgccggaaccattaccgtctatgaaggttccagac                                              >  1:101413‑M2/1‑55 (MQ=255)                                                                                                       gtgtTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAgcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctctgaaaatccggatgaagccgggcgttacagcatggatgtcgagtatggccagtacagcgtcaccctgctggttgaaggttttccgccttcacatgccggaaccattaacgtctatgaaggttccagacct                                            <  1:99502‑M2/300‑247 (MQ=255)                                                                                                       gtgtTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAgcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctctgaaaatccggatgaagcagggcgttacagcatggatgtcgagtatggccagtacagcgtcaccctgctggttgaaggttttccgacttcacatgccggaaccattaccgtctatgaaggttccagacct                                            <  2:10682‑M2/300‑247 (MQ=255)                                                                                                          ttATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAgcagtaaaaatctcaggtgtgctgaaagatggtggggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctctgaaaatccggatgaagccgggcgttacagcatggatgtcgagtatggccagtacagcgtcaccctgctggttgaaggttttccgccttcacatgccggaaccattaccgtctatgaaggttccagacctggta                                         >  1:201264‑M2/1‑51 (MQ=255)                                                                                                                                                 gTGGATATGGCAgcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctctgaaaatccggatgaagccgggcgttacagcatggatgtcgagtatggccagtacagcgtcaccctgctggttgaaggttttccgccttcacatgccggaaccattaccgtctatgaaggttccagacctggtacgctgaatgattttctaggtgccatgacggaagatgat  <  2:796282‑M2/300‑289 (MQ=255)                                                                                                                                                 |                                                                                                                                                                                                                                                                                                            TCGTTGTTGATATTGCTTATGAAGGCTCCGGCAGTGGCGACTGGCGTACTGACGGATTCATCGTTGGGGTCGGTTATAAATTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGAACCGGTGGGCTTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGAGTCCTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACCATTCAGCTGAAAGCCAGACGTAACAGCACCACGGTGGTGGTGAACACGGTGGGCTCAGAGAATCCGGATGAAGCCGGGCGTTACAGCATGGATGTGGAGTACGGTCAGTACAGTGTCATCCTGCAGGTTGACGGTTTTCCACCATCGCACGCCGGGACCATCACCGTGTATGAAGATTCACAACCGGGGACGCTGAATGATTTTCTCTGTGCCATGACGGAGGATGATGCC  >  NC_012971/787975‑788418

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑