New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_012971	550553 =	0 (0.000)	53 (0.550)	28/588	2.2	100%	pseudogene (4/364 nt)	ECD_RS02680	prophage tail fiber N‑terminal domain‑containing protein
	?	NC_012971	= 788130	0 (0.000)					pseudogene (6/1155 nt)	ECD_RS23105	prophage tail fiber N‑terminal domain‑containing protein

TCGTTGTTGATATTGCTTATGAAGGCTCCGGCAGTGGCGACTGGCGTACTGACGGATTCATCGTTGGGGTCGGTTATAAATTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGAACCGGTGGGCTTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGAGTCCTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACCATTCAGCTGAAAGCCAGACGTAACAGCACCACGGTGGTGGTGAACACGGTGGGCTCAGAGAATCCGGATGAAGCCGGGCGTTACAGCATGGATGTGGAGTACGGTCAGTACAGTGTCATCCTGCAGGTTGACGGTTTTCCACCATCGCACGCCGGGACCATCACCGTGTATGAAGATTCACAACCGGGGACGCTGAATGATTTTCTCTGTGCCATGACGGAGGATGATGCCCG  >  NC_012971/787975‑788420                                                                                                                                                            |                                                                                                                                                                                                                                                                                                   tggccattgaccttgcttatgaaggtTCCGGCAGTGGTGACTGGCGCACTGACGGTTTCATCGTGGGGGTCGGTTATAAATTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAgcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctctgaaaatccggatgaagccgggcgttac                                                                                                                                                    >  2:22090‑M2/13‑156 (MQ=255)   gccatttaccttgcgtatgaagGTTCCGGCAGTGGTGACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAATTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAgcagtaaaaanctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctctgaaaatccggatgaagccgggcgttacag                                                                                                                                                  >  2:575062‑M2/11‑154 (MQ=255)      attgaccttgcttatgAAGGTTCCGGCAGTGGTGACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAATTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAgcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctctgaaaatccggatgaagccgggcgttacagcat                                                                                                                                               >  1:79686‑M2/8‑151 (MQ=255)                 ttATGAAGGTTCCGGCAGTGGTGACTGGCGCACGGACGGTTTCATCGTGGGTGTCGGTTATAAATTCTGATTAGCCANGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAgcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcactacggtactggtgaacacggtagcctctgaaaatccggatgaagccgggcgttacagcatggatgtcgag                                                                                                                                     >  1:154344‑M2/1‑140 (MQ=255)                          ttcCGGCAGTGGTGACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAATTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAgcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccaaggtactggtgaacacggtagcatatgaaaatccggatgaagccgggcgttacagcatggatgtcgagtatggcaagt                                                                                                                           <  2:755412‑M2/299‑170 (MQ=255)                              ggCAGTGGTGACTTGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAATTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCNCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAgcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctctgaaaatccggatgaagccgggcgttacagcatggatgtcgagtatggccagtac                                                                                                                         >  2:627309‑M2/1‑127 (MQ=255)                              ggCAGTGGTGACTTGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAATTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAgcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctctgaaaatccggatgaagccgggcgttacagcatggatgtcgagtatggccagtac                                                                                                                         >  2:805674‑M2/1‑127 (MQ=255)                              ggCAGTGGTGACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAATTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAgcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctctgaaaatccggatgaagccgggcgttacagcatggatgtcgagtatggccagtac                                                                                                                         >  2:805424‑M2/1‑127 (MQ=255)                              ggCAGTGGTGACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAATTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAgcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctctgaaaatccggatgaagccgggcgttacagcatggatgtcgagtatggccagtac                                                                                                                         >  1:72106‑M2/1‑127 (MQ=255)                              ggCAGTGGTGACTGGCGCACTGACGGGTTCAGCGTGGGTGTCGGTGATAAATTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCNCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAgcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctctgaaaatccggatgaagccgggcgttacagcatggatgtcgagtatggccagtac                                                                                                                         >  2:627299‑M2/1‑127 (MQ=255)                                 aGTGGTGACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAATTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAgcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctctgaaaatccggatgaagccgggcgttacagcatggatgtcgagtatggccagtacagcgt                                                                                                                    >  2:702314‑M2/1‑124 (MQ=255)                                  gtggtgACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAATTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAgcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctctgaaaatccggatgaagcagggcgttacagcatggatgtcgagtatggcaagtacagcgtc                                                                                                                   <  2:95022‑M2/300‑178 (MQ=255)                                      tgaCTGGCGCACTGACTGTTTCATCGTGGGTGTCGGTTATAAATTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAgcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccantacagaactgcactattcaactgaaggcaaagngtaacagcaccacggtactggtgaacacggtagcctctgaaaatccggatgaagccgggcgttacagcatggatgtcgagtatggccagtacagcgtcaccc                                                                                                               >  2:616661‑M2/2‑119 (MQ=255)                                               cacTGACGGTTTCATCGTGGGTGTCGGTTATAAATTCTGATTAGCAAGGTAACACAGTGTTATGACGGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAgcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaataccgaactgcactcttcaactgaaggcaaagagtaacagcaccacggtactggtgaacacggtagcctctgaaaatccggatgaagccgggcgttacagcatggatgtcgagtatggccagtacagcgtcaacatgctggtt                                                                                                       <  2:175014‑M2/298‑190 (MQ=255)                                                   gACGGTTTCATCGTGGGTGTCGGTTATAAATTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAgcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctctgaaaatccggatgaagccgggcgttacagcatggatgtcgagtatggccagtacagcgt                                                                                                                    >  1:542656‑M2/1‑106 (MQ=255)                                                         ttCATCGTGGGTGTCGGTTATAAATTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAgcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctctgaaantccggatgaagccgggcgttacagcatggatgtcgagtatggccagtacagcgtcaccctgctggttgaaggttttcc                                                                                            <  1:170990‑M2/300‑201 (MQ=255)                                                                       cGGTTATAAATTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAgcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctctgaaaatccggatgaagccgggcgttacagcatggatgtcgagtatggccagtacagcgtcaacctgctggttgaaggttttccgccttcacatgca                                                                               <  2:646520‑M2/299‑214 (MQ=255)                                                                                 ttCTGATGATCCGGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAgcagtaaaaatctcaggtgtgcttaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctctgaaaatccggatgaagccgggcgttacagcatggatgtcgagtatggccagtacaacgtcaccctgctggttgaaggttttccgccttcacatgccggaaccattac                                                                    >  2:375969‑M2/1‑76 (MQ=255)                                                                                    tGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAgcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctctgaaaatccggatgaagccgggcgttacagcatggatgtcgagtatggccagtacagcgtcaccctgctggttgaaggttttccgccttcacatgccggaaccattaccg                                                                  >  1:242031‑M2/1‑73 (MQ=255)                                                                                     gATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGATTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAgcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctctgaaaatccggatgaagccgggcgttacagcatggatgtcgagtatggccagtacagcgtaaccctgctggttgaaggttttccgccttcacatgccggaaccattaccgtc                                                                >  1:665674‑M2/1‑72 (MQ=255)                                                                                          gCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAgcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctctgaaaatccggatgaagccgggcgttacagcatggatgtcgagtatggccagtacagcgtcaccctgctggttgaaggttttccgccttcacatgccggaaccattaccgtctatga                                                           <  1:695551‑M2/300‑234 (MQ=255)                                                                                             aGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGGGTGGATATGGCAgcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctctgaaaatccggatgaagccgggcgttacagcatggatgtcgagtatggccagtacagcgtcaccctgctggttgaaggttttccgccttcacatgccggaaccattaccgtctatgaa                                                          >  1:751072‑M2/1‑64 (MQ=255)                                                                                             aGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAgcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctctgaaaatccggatgaagccgggcgttacagcatggatgtcgagtatggccagtacagcgtcaccctgcttgttgaaggttttccgccttcacatgccggaaccattaccgtctatgaa                                                          <  1:319081‑M2/298‑235 (MQ=255)                                                                                             aGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAgcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctctgaaaatccggatgaagccgggcgttacagcatggatgtcgagtatggccagtacagcgtcaccctgctggttgaaggttttccgccttcacatgccggaaccattaccgtctatgaagg                                                        >  1:549778‑M2/1‑64 (MQ=255)                                                                                             aGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAgcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctctgaaaatccggatgaagccgggcgttacagcatggatgtcgagtatggccagtacagcgtcaccctgctggttgaaggttttccgccttcacatgccggaaccattaccgtctatgaa                                                          >  1:649036‑M2/1‑64 (MQ=255)                                                                                             aGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAgcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctctgaaaatccggatgaagccgggcgttacagcatggatgtcgagtatggccagtacagcgtcaccctgctggttgaaggttttccgccttcacatgccggaaccattaccgtctatgaa                                                          >  2:44941‑M2/1‑64 (MQ=255)                                                                                               gTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAgcagtaaaaatctaaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgacggcaaagcgtaacagcaccagggtactggtgaacacggtagcctctgaaaatccggatgaagccgggcgttacagcatggatgtcgagtatggccagtacagcgtcaccctgctggttgaaggttttccgccttcacatgccggaaccattaacgtatatgaaggtt                                                      <  2:206416‑M2/300‑239 (MQ=255)                                                                                                      aGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAgcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctctgaaaatccggatgaagccgggcgttacagcatggatgtcgagtatggccagtacagcgtcaccctgctggttgaaggttttccgccttcacatgccggaaccattaccgtctatgaaggttccagacc                                               >  1:89806‑M2/1‑55 (MQ=255)                                                                                                      aGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAgcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctctgaaaatccggatgaagccgggcgttacagcatggatgtcgagtatggccagtacagcgtcaccctgctggttgaaggttttccgccttcacatgccggaaccattaccgtctatgaaggttccagac                                                >  1:101413‑M2/1‑55 (MQ=255)                                                                                                       gtgtTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAgcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctctgaaaatccggatgaagccgggcgttacagcatggatgtcgagtatggccagtacagcgtcaccctgctggttgaaggttttccgccttcacatgccggaaccattaacgtctatgaaggttccagacct                                              <  1:99502‑M2/300‑247 (MQ=255)                                                                                                       gtgtTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAgcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctctgaaaatccggatgaagcagggcgttacagcatggatgtcgagtatggccagtacagcgtcaccctgctggttgaaggttttccgacttcacatgccggaaccattaccgtctatgaaggttccagacct                                              <  2:10682‑M2/300‑247 (MQ=255)                                                                                                          ttATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAgcagtaaaaatctcaggtgtgctgaaagatggtggggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctctgaaaatccggatgaagccgggcgttacagcatggatgtcgagtatggccagtacagcgtcaccctgctggttgaaggttttccgccttcacatgccggaaccattaccgtctatgaaggttccagacctggta                                           >  1:201264‑M2/1‑51 (MQ=255)                                                                                                                      gaagatatcgtaccggggccgtcagctccgaatatggcagcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctctgaaaatccggatgaagccgggcgttacagcatggatgtcgagtatggccagtacagcgtcaccctgctggttgaaggttttccgccttcacatgccggaaccattaccgtctatgaaggttccagacctggtacgctgaatg                                 >  1:535885‑M2/30‑39 (MQ=255)                                                                                                                         gatatcgtaccggggccgtcagctccgaatatggcagcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctctgaaaatccggatgaagccgggcgttacagcatggatgtcgagtatggccagtacagcgtcaccctgctggttgaaggttttccgccttcacatgccggaaccattaccgtctatgaaggttccagacctggtacgctgaatgatttt                            <  1:617557‑M2/274‑265 (MQ=255)                                                                                                                          atatcgtaccggggccgtcagctccgaatatggcagcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctctgaaaatccggatgaagccgggcgttacagcatggatgtcgagtatggccagtacagcgtcaccctgctggttgaaggttttccgccttcacatgccggaaccattaccgtctatgaaggttccagacctggtacgctgaatgattttc                           <  1:11122‑M2/275‑266 (MQ=255)                                                                                                                           tatcgtaccggggccgtcagctccgaatatggcagcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctctgaaaatccggatgaagccgggcgttacagcatggatgtcgagtatggccagtacagcgtcaccctgctggttgaaggttttccgccttcacatgccggaac                                                                          >  1:72330‑M2/25‑34 (MQ=255)                                                                                                                           tatcgtaccggggccgtcagctccgaatatggcagcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcatctgaaaatccggatgaagccgggcgttacagcatggatgtcgagtatggccagtacagcgtcaccctgctggttgaaggttttccgccttcacatgccggaac                                                                          <  2:72330‑M2/228‑219 (MQ=255)                                                                                                                             tcgtaccggggccgtcagctccgaatatggcagcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcgctattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctctgaaaatccggatgaagccgggcgttacagcatggatgtcgagtatggccagtacagcgtcaccctgctggttgaaggttttccgccttcacatgccggaaccattaccgtctatgaaggttccagacctggtacgctgaatgattttctcg                        >  1:417302‑M2/23‑32 (MQ=255)                                                                                                                             tcgtaccggggccgtcagctccgaatatggcagcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctctgaaaatccggatgaagccgggcgttacagcatggatgtcgagtatggccagtacagcgtcaccctgctggttgaaggttttccgccttcacatgccggaaccattaccgtctatgaaggttccagacctggtacgctgaatgattttctcg                        >  1:417190‑M2/23‑32 (MQ=255)                                                                                                                               gtaccggggccgtcagctccgaatatggcagcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctctgaaaatccggatgaagccgggcgttacagcatggatgtcgagtatggccagtacagcgtcaccctgctggttgaaggttttccgccttcacatgccggaaccattaccgtctatgaaggttccagacctggtacgccgaatgattttctcggt                      <  1:227137‑M2/280‑271 (MQ=255)                                                                                                                                 acctgtgccgtcagctccgaatatggcagcattaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcttaacagcaccacggtactggtgaacacggtagcctctgaaaatccggatgaagccgggcgttacagcatggatttcgagtatggccagtacagcgtcaccctgctggttgaaggttttccgcctccacatgccggaaccattaccgtctatgaaggttccagacctggtacgctgaatgattttctcggtgc                    >  2:167036‑M2/19‑28 (MQ=255)                                                                                                                                    ggggccgtcagctccgaatatggcagcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctctgaaaatccggatgaagccgggcgttacagcatggatgtcgagtatggccagtacagcgtcaccctgctggttgaaggttttccgccttcacatgccggaaccattaccgtctatgaaggttccagacctggtacgctgaatgattttctcggtgccat                 <  2:73696‑M2/285‑276 (MQ=255)                                                                                                                                      ggccgtcagctccgaatatggcagcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctctgaaaatccggatgaagccgggcgttacagcatggatgtcgagtatggccagtacagcgtcaccctgctggttgaaggttttccgccttcacatgccggaaccattaccgtctatgaaggttccagacctggtacgctgaatgattttctcggtgccatga               >  1:483654‑M2/14‑23 (MQ=255)                                                                                                                                              gctccgaatatGGCAgcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctctgaaaatcggatgaagccgggcgttacagcatggatgtcgagtatggccagtacagcgtcaccctgctggttgaaggttttccgccttcacatgccggaaccattaccgtctatgaaggttccagacctggtacgctgaatgattttctcggtgccatgaaggaagat        <  2:783454‑M2/294‑285 (MQ=255)                                                                                                                                              gctccgaatatGGCAgcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctctgaaaatccggatgaagccgggcgttacagcatggatgtcgagtatggccagtacagcgtcaccctgctggttgaaggttttccgccttcacatgccggaaccattaccgtctatgaaggttccagacctggtacgctgaatgattttctcggtgccatgacggaagat       >  1:793356‑M2/6‑15 (MQ=255)                                                                                                                                                 gTGGATATGGCAgcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctctgaaaatccggatgaagccgggcgttacagcatggatgtcgagtatggccagtacagcgtcaccctgctggttgaaggttttccgccttcacatgccggaaccattaccgtctatgaaggttccagacctggtacgctgaatgattttctaggtgccatgacggaagatgat    <  2:796282‑M2/300‑289 (MQ=255)                                                                                                                                                   ggatatggCAgcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctctgaaaatccggatgaagccgggcgttacagcatggatgtcgagtatggccagtacagcgtcaccctgctggttgaaggttttccgccttcacatgccggaaccattaccgtctatgaaggttccagacctggtacgctgaatgattttctcggtgccatgacggaagatgatgt  <  2:506929‑M2/298‑291 (MQ=255)                                                                                                                                                   ggatatggCAgcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctctgaaaatccggatgaagccgggcgttacagcatggatgtcgagtatggccagtacagcgtcaccctgctggttgaaggttttccgccttcacatgccggaaccattaccgtctatgaaggttccagacctggtacgctgaatgattttctcggtgccatgacggaagatgatgt  <  1:133670‑M2/298‑291 (MQ=255)                                                                                                                                                   ggatatggCAgcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctctgaaaatccggatgaagccgggcgttacagcatggatgtcgagtatggccagtacagcgtcaccctgctggttgaaggttttccgccttcacatgccggaaccattaccgtctatgaaggttccagacctggtacgctgaatgattttctcggtgccatgaaggaagatgatgt  <  1:134478‑M2/298‑291 (MQ=255)                                                                                                                                                   ggatatggCAgcagtaaaaatctaaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctctgaaaatccggatgaagccgggcgttacagcatggatgtcgagtatggccagtacagcgtcaccctgctggttgaaggttttccgccttcacatgccggaaccattaccgtctatgaaggttccagacctggtacgctgcatgattttctcggtgccatgacggaagataatgt  <  2:344570‑M2/298‑291 (MQ=255)                                                                                                                                                   gAATATGGCAgcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctatgaaaatccggatgaagccgggcgttacagcatggatgtcgagtatggccagtacagcgtcaccctgctggttgaaggttttccgccttcacatgccggaaccattaccgtctatgaaggttccagacctggtacgctgaatgattttctcggtgccatgacggaagatgatgt  <  2:189752‑M2/300‑291 (MQ=255)                                                                                                                                                   gAATATGGCAgcagtaaaaatctaaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctatgaaaatccggatgaagccgggcgttacagcatggatgtcgagtatggccagtacagcgtcaccctgctggttgaaggttttccgccttcacatgccggaaccattaccgtctatgaaggttccagacctggtacgctgaatgattttctcggtgccatgaaggaagatgatgt  <  2:186811‑M2/300‑291 (MQ=255)                                                                                                                                                   gAATAGGGCAgcattaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacgggattgtactatttaatggaaggcaaagcgtaacagcaccacggtactggtgaacacggtagcctccgaaaatccggatgaagccgggcgttacagcatggaggtcgagtatggccagtacagcgtcaccctgctggttgaaggttttccgccttcacatgccggaaccattaccgtctatgaaggttccagacctggtacgctgaatgattttctcggtgccatgacggaagatgatgt  >  2:699105‑M2/1‑10 (MQ=255)                                                                                                                                                            |                                                                                                                                                                                                                                                                                                   TCGTTGTTGATATTGCTTATGAAGGCTCCGGCAGTGGCGACTGGCGTACTGACGGATTCATCGTTGGGGTCGGTTATAAATTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGAACCGGTGGGCTTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGAGTCCTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACCATTCAGCTGAAAGCCAGACGTAACAGCACCACGGTGGTGGTGAACACGGTGGGCTCAGAGAATCCGGATGAAGCCGGGCGTTACAGCATGGATGTGGAGTACGGTCAGTACAGTGTCATCCTGCAGGTTGACGGTTTTCCACCATCGCACGCCGGGACCATCACCGTGTATGAAGATTCACAACCGGGGACGCTGAATGATTTTCTCTGTGCCATGACGGAGGATGATGCCCG  >  NC_012971/787975‑788420

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.