| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_012971 | = 3643247 | 112 (1.160) | 10 (0.110) | 8/534 | 6.1 | 9.0% | coding (1822/4851 nt) | ECD_RS18090 | YadA‑like family protein |
| ? | NC_012971 | 3643503 = | 102 (1.170) | coding (2078/4851 nt) | ECD_RS18090 | YadA‑like family protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
CAATACCACCAATATCACCAACCTGACGGATTCCGTTGGTGACCTTCAGGCTGATGCCCTGCTCTGGAACGAAACTAAAAAGGCATTCAGTGCAGCTCACGGCCAGGATACCACCAGCAAAATCACCAACGTTAAAGATGCCGACCTGACGGCTGACAGCACTGATGCTGTTAACGGCTCTCAGCTGAAAACCACCAACGATGCTGTGGCGACGAATACCACCAATATCGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_012971/3643015‑3643247‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtggcgacgaataccaccaatatcgccaCTAACACCACCAACATCTCTAATCTGACTGAGACGGTGACTAATCTTGGTGAGGATGCGCTGAAATGGGATAAGGACAATGGTGTCTTCACTGCAGCTCATGGCAACAATACCGCCAGCAAAATCACCAATATCCTGGACGGCACAGTCACTGCAACCAGTTCCGATGCCATTAACGGTAGCCAGCTTTATGACTTAAGCAGCAATATCGCCACCTACTTCGGCGGCAATGCTTCTGTGAATAC > NC_012971/3643503‑3643746 CAATACCACCAATATCACCAACCTGACGGATTCCGTTGGTGACCTTCAGGCTGATGCCCTGCTCTGGAACGAAACTAAAAAGGCATTCAGTGCAGCTCACGGCCAGGATACCACCAGCAAAATCACCAACGTTAAAGATGCCGACCTGACGGCTGACAGCACTGATGCTGTTAACGGCTCTCAGCTGAAAACCACCAACGATGCTGTGGCGACGAATACCACCAATATCGCCACTAACACCACCAACATCTCTAATCTGACTGAGGCGGTGACTAATCTTGGTGAGGATGCGCTGAAAT > 2:510194/1‑299 ACCAACCTGACGGATTCCGTTGGTGACCTTCAGGCTGATGCCCTGCTCTGGAACGAAACTAAAAAGGCATTCAGTGCAGCTCACGGCCAGGATACCACCAGCAAAATCACCAACGTTAAAGATGCCGACCTGACGGCTGACAGCACTGATGCTGTTAACGGCTCTCAGCTGAAAACCACCAACGATGCTGTGGCGACGAATACCACCAATATCGCCACTAACACCACCAACATCTCTAATCTGACTGAGACGGTGACTAATCTTGGTGAGGATGCGCTGAAATGGGATAAGGACAATGG < 1:510194/299‑1 CCTTCAGGCTGATGCCCTGCTCTGGAACGAAACTAAAAAGGCATTCAGTGCAGCTCACGGCCAGGATACCACCAGCAAAATCACCAACGTTAAAGATGCCGACCTGACGGCTGACAGCACTGATGCTGTTAACGGCTCTCAGCTGAAAACCACCAACGATGCTGTGGCGACGAATACCACCAATATCGCCACTAACACCAACAACATCTATAATCTGACTGAGACGGTGACTAATCTTGGTGAGGATGCGCTGAAATGGGATAAGGACAATGGTGTCTTCACTGCAGCTCATGGCAACAA > 2:111905/1‑300 CCTTCAGGCTGATGCCCTGCTCTGGAACGAAACTAAAAAGGCATTCAGTGCAGCTCACGGCCAGGATACCACCAGCAAAATCACCAACGTTAAAGATGC‑GACCTGACGACTGGCAGCACCGATGCCGTTAACGGCTCTCAGCTGAAAACCACCNACGATGCCGTGGCGACGAATACCACCAATATCGCCACTAACACCACCAACATCTCTAATCTGACTGAGACGGTGACTAATCTTGGTGAGGATGCGCTGAAATGGGATAAGGACAATGGTGTCTTCACTGCAGCTC < 2:594056/289‑1 CCTTCAGGCTGATGCCCTGCTCTGGAACGAAACTAAAAAGGCATTCAGTGCAGCTCACGGCCAGGATACCACCAGCAAAATCACCAACGTTAAAGATGC‑GACCTGACGACTGGCAGCACCGATGCCGTTAACGGCTCTCAGCTGAAAACCACCAACGATGCCGTGGCGACGAATACCACCAATATCGCCACTAACACCACCAACATCTCTAATCTGACTGANACGGTGACTAATCTTGGTGAGGATGCGCTGAAATGGGATAAGGACAATGGTGTCTTCACTGCAGCTC > 1:594056/1‑289 AAAAAGGTATTCACTGCAGCTCACGGCAATGAGACCACCAGCAAAATCACCAACGTTAAAGATGTCGACCTGACGGCTGGCAGCACTGATGCTGTTAACGGCTCTCAGCTGAAAACCACCAACGATGCCGTGGCGACGAATACCACCAATATCGCCACTAACACCACCAACATCTCTAATCTGACTTAGACGGTGACTAATCTTGGTGAGGATGCGCTGAAATGGGATAAGGACAATGG < 1:700372/239‑1 agGCACTGGTGCTGTTAACGGCTCTCAGCTGAAAACCACCAACGATGCTGTGGCGACGAATACCACCAATATCGCCACTAACACCACCAACATCTCTAATCTGACTTAGACGGTGACTAATCTTGGTGAGGATGCGCTGAAATGGGATAAGGACAATGGTGTCTTCACTGCAGCTCATGGCAACAATACCGCCAGCAAAATCACCAATATCCTGGACGGCACAGTCACTGCAACCAGTTCCGATGCCATTAACGGTAGCCAGCTTTATGACTTAAGC < 2:791374/275‑1 CACTGATGCTGTTAACGCCTCTCAGCTGAAAACCACCAACGATGCCGTGGCGACGAATACCACCAATATCGCCACTAACACCACCAACATCTCTAATCTGACTGAGACGGTGACTAATCTTGGTGAGGATGCGCTGAAATGGGATAAGGACAATGGTGTCTTCACTGCAGCTCATGGCAACAATACCGCCAGCAAAATCACCAATATCCTGGACGGCACAGTCACTGCAACCAGTTCCGATGCCATTAACGGTAGCCAGCTTTATGACTTAAGCAGCAATATCGCCACCT > 1:50045/1‑290 CACTGATGCTGTTAACGCCTCTCAGCTGAAAACCACCAACAATGCCGTGGCGACGAATACCACCAATATCGCCACTAACACCACCAACATCTCTAATCTGACTTAGACGGTGACTAATCTTGGTGAGGATGCGCTGAAATGGGATAAGGACAATGGTGTCTTCACTGCAGCTCATGGCAACAATACCGCCAGCAAAATCACCAATATCCTGGACGGCACAGTCACTGCAACCAGTTCCGATGCCATTAACGGTAGCCAGCTTTATGACTTAAGCAGCAATATCGCCACCT < 2:50045/290‑1 TCTCAGCTGAAAACCACCAACGATGCTGTGGCGACGAATACCACCAATATCGCCACTAACACCACCAACATCTCTAATCTGACTTAGACGGTGACTAATCTTGGTGAGGATGCGCTGAAATGGGATAAGGACAATGGTGTCTTCACTGCAGCTCATGGCAACAATACCGCCAGCAAAATCACCAATATCCTGGACGGCACAGTCACTGCAACCAGTTCCGATGCCATTAACGGTAGCCAGCTTTATGACTTAAGCAGCAATATCGCCACCTACTTCGGCGGCAATGCTTCTGTGAATAC < 1:111905/299‑1 CAATACCACCAATATCACCAACCTGACGGATTCCGTTGGTGACCTTCAGGCTGATGCCCTGCTCTGGAACGAAACTAAAAAGGCATTCAGTGCAGCTCACGGCCAGGATACCACCAGCAAAATCACCAACGTTAAAGATGCCGACCTGACGGCTGACAGCACTGATGCTGTTAACGGCTCTCAGCTGAAAACCACCAACGATGCTGTGGCGACGAATACCACCAATATCGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_012971/3643015‑3643247‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtggcgacgaataccaccaatatcgccaCTAACACCACCAACATCTCTAATCTGACTGAGACGGTGACTAATCTTGGTGAGGATGCGCTGAAATGGGATAAGGACAATGGTGTCTTCACTGCAGCTCATGGCAACAATACCGCCAGCAAAATCACCAATATCCTGGACGGCACAGTCACTGCAACCAGTTCCGATGCCATTAACGGTAGCCAGCTTTATGACTTAAGCAGCAATATCGCCACCTACTTCGGCGGCAATGCTTCTGTGAATAC > NC_012971/3643503‑3643746 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |