mutation predictions | marginal predictions | summary statistics | genome diff | command line log
|
breseq version 0.39.0
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Predicted mutations | |||||
|---|---|---|---|---|---|
| evidence | position | mutation | annotation | gene | description |
| RA | 3,645 | G→A | W282* (TGG→TAG) | thrB → | homoserine kinase |
| RA | 71,170 | T→C | S262P (TCG→CCG) | araC → | DNA‑binding transcriptional dual regulator AraC |
| RA | 81,044 | C→T | L305L (CTG→CTA) | leuB ← | 3‑isopropylmalate dehydrogenase |
| RA | 81,102 | G→A | S286L (TCG→TTG) | leuB ← | 3‑isopropylmalate dehydrogenase |
| RA | 85,203 | C→T | P279L (CCG→CTG) | leuO → | DNA‑binding transcriptional dual regulator LeuO |
| RA | 154,182 | C→T | L415L (CTG→CTA) | htrE ← | putative fimbrial usher protein HtrE |
| RA | 156,068 | A→G | V45A (GTA→GCA) | yadV ← | putative fimbrial chaperone YadV |
| JC JC | 168,803 | IS1 (+) +9 bp | coding (1320‑1328/2244 nt) | fhuA → | ferrichrome outer membrane transporter/phage receptor |
| RA | 246,747 | G→T | S12S (TCG→TCT) | yafL → | NlpC/P60 family protein YafL |
| RA | 284,535 | T→G | A445A (GCT→GCG) | yagF → | D‑xylonate dehydratase |
| RA | 313,543 | G→A | intergenic (‑301/‑1748) | ykgR ← / → insE1 | putative membrane protein YkgR/IS3 element protein InsE |
| MC JC | 366,181 | Δ93 bp | coding (33‑125/3075 nt) | lacZ ← | beta‑galactosidase |
| RA | 367,573 | G→A | intergenic (‑63/+14) | lacI ← / ← mhpR | DNA‑binding transcriptional repressor LacI/DNA‑binding transcriptional activator MhpR |
| RA | 456,711 | C→G | P12R (CCC→CGC) | clpP → | ATP‑dependent Clp protease proteolytic subunit |
| RA | 463,184 | C→T | L424L (CTG→TTG) | ppiD → | periplasmic folding chaperone |
| RA | 472,849 | A→G | G84G (GGA→GGG) | glnK → | nitrogen regulatory protein PII‑2 |
| RA | 495,622 | C→T | T168I (ACC→ATC) | htpG → | chaperone protein HtpG |
| RA | 525,532 | T→C | C758R (TGC→CGC) | rhsD → | protein RhsD |
| RA | 525,576 | G→C | Q772H (CAG→CAC) | rhsD → | protein RhsD |
| RA | 525,585 | 3 bp→CGG | coding (2325‑2327/4281 nt) | rhsD → | protein RhsD |
| RA | 525,591 | C→T | H777H (CAC→CAT) | rhsD → | protein RhsD |
| RA | 525,594 | A→G | A778A (GCA→GCG) | rhsD → | protein RhsD |
| RA | 525,603 | G→A | E781E (GAG→GAA) | rhsD → | protein RhsD |
| RA | 525,636 | C→T | S792S (AGC→AGT) | rhsD → | protein RhsD |
| RA | 534,742 | G→A | G276D (GGT→GAT) | gcl → | glyoxylate carboligase |
| RA | 547,891 | C→T | L404L (CTC→CTT) | fdrA → | putative oxamate carbamoyltransferase FdrA |
| MC JC | 575,786 | Δ3,398 bp | IS5‑mediated | [nmpC]–borD | [nmpC], essD, rrrD, rzpD, rzoD, borD |
| RA | 582,597 | C→T | intergenic (+500/‑278) | tfaD → / → tfaX | putative tail fiber assembly protein TfaD/protein TfaX |
| RA | 694,941 | G→A | L5L (CTC→CTT) | miaB ← | isopentenyl‑adenosine A37 tRNA methylthiolase |
| RA | 696,470 | C→T | noncoding (35/75 nt) | glnX ← | tRNA‑Gln |
| RA | 780,624 | C→T | noncoding (71/76 nt) | lysT → | tRNA‑Lys |
| RA | 789,580 | C→A | E134* (GAA→TAA) | galK ← | galactokinase |
| RA | 790,832 | Δ1 bp | coding (198/1047 nt) | galT ← | galactose‑1‑phosphate uridylyltransferase |
| RA | 822,527 | C→T | E405K (GAA→AAA) | clsB ← | cardiolipin synthase B |
| RA | 854,560 | A→G | N305S (AAC→AGC) | ybiR → | putative transporter YbiR |
| RA | 883,396 | C→T | intergenic (‑8/‑277) | ybjG ← / → mdfA | undecaprenyl pyrophosphate phosphatase/multidrug efflux pump MdfA/Na(+):H(+) antiporter/K(+):H(+) antiporter |
| RA | 884,892 | C→T | S407F (TCT→TTT) | mdfA → | multidrug efflux pump MdfA/Na(+):H(+) antiporter/K(+):H(+) antiporter |
| RA | 905,283 | G→T | G124V (GGC→GTC) | amiD → | N‑acetylmuramoyl‑L‑alanine amidase D |
| RA | 908,169 | C→T | R38R (AGG→AGA) | ybjT ← | putative NAD(P)‑binding protein YbjT |
| RA | 909,990 | C→T | E354K (GAG→AAG) | poxB ← | pyruvate oxidase |
| RA | 922,954 | G→T | A14A (GCG→GCT) | clpS → | specificity factor for ClpA‑ClpP chaperone‑protease complex |
| RA | 930,086 | C→T | A293T (GCC→ACC) | cydD ← | glutathione/L‑cysteine ABC exporter subunit CydD |
| JC JC | 1,085,983 | IS1 (+) +8 bp | coding (992‑999/1065 nt) | phoH → | ATP‑binding protein PhoH |
| RA | 1,114,320 | C→T | A391T (GCA→ACA) | mdtG ← | efflux pump MdtG |
| RA | 1,123,823 | 2 bp→AG | coding (231‑232/648 nt) | grxB ← | reduced glutaredoxin 2 |
| RA | 1,147,792 | T→A | S58T (TCG→ACG) | plsX → | putative phosphate acyltransferase |
| RA | 1,169,836 | A→G | L180P (CTG→CCG) | ldtC ← | L,D‑transpeptidase LdtC |
| RA | 1,189,980 | A→G | T156T (ACT→ACC) | phoP ← | DNA‑binding transcriptional dual regulator PhoP |
| RA | 1,194,922 | G→A | T10T (ACC→ACT) | rluE ← | 23S rRNA pseudouridine(2457) synthase |
| RA | 1,196,220 | C→T | H366H (CAC→CAT) | icd → | isocitrate dehydrogenase |
| RA | 1,196,232 | C→T | T370T (ACC→ACT) | icd → | isocitrate dehydrogenase |
| RA | 1,196,245 | T→C | L375M (TTA→CTG) | icd → | isocitrate dehydrogenase |
| RA | 1,196,247 | A→G | L375M (TTA→CTG) | icd → | isocitrate dehydrogenase |
| RA | 1,196,277 | C→T | N385N (AAC→AAT) | icd → | isocitrate dehydrogenase |
| RA | 1,196,280 | G→C | A386A (GCG→GCC) | icd → | isocitrate dehydrogenase |
| RA | 1,196,283 | A→G | K387K (AAA→AAG) | icd → | isocitrate dehydrogenase |
| RA | 1,196,292 | C→T | T390T (ACC→ACT) | icd → | isocitrate dehydrogenase |
| RA | 1,253,002 | C→T | intergenic (+17/+83) | dhaR → / ← ycgV | DNA‑binding transcriptional dual regulator DhaR/putative autotransporter adhesin YcgV |
| RA | 1,253,551 | G→A | A801V (GCC→GTC) | ycgV ← | putative autotransporter adhesin YcgV |
| RA | 1,290,118 | G→A | E292K (GAA→AAA) | rssA → | putative patatin‑like phospholipase RssA |
| RA | 1,301,992 | A→T | N271Y (AAT→TAT) | oppA → | oligopeptide ABC transporter periplasmic binding protein |
| RA | 1,306,736 | T→G | S325A (TCC→GCC) | oppF → | murein tripeptide ABC transporter/oligopeptide ABC transporter ATP binding subunit OppF |
| RA | 1,308,684 | T→C | intergenic (‑39/‑104) | clsA ← / → yciY | cardiolipin synthase A/uncharacterized protein YciY |
| RA | 1,331,059 | 2 bp→AT | coding (12‑13/2598 nt) | topA → | DNA topoisomerase 1 |
| RA | 1,337,394 | A→G | S522G (AGC→GGC) | acnA → | aconitate hydratase 1 |
| RA | 1,358,859 | T→C | Y110C (TAT→TGT) | puuP ← | putrescine:H(+) symporter PuuP |
| RA | 1,386,348 | A→G | M280V (ATG→GTG) | ycjF → | DUF697 domain‑containing inner membrane protein YcjF |
| RA | 1,405,758 | G→A | intergenic (‑7/‑221) | mcaS ← / → smrA | small regulatory RNA McaS/DNA endonuclease SmrA |
| RA | 1,426,980 | A→G | N176S (AAT→AGT) | ynaA → | putative prophage tail length tape measure domain‑containing protein YnaA |
| RA | 1,428,150 | G→A | L193L (CTG→TTG) | insH5 ← | IS5 family transposase and trans‑activator |
| RA | 1,489,491 | G→A | L420L (CTG→CTA) | aldA → | aldehyde dehydrogenase A |
| RA | 1,494,958 | A→T | S38R (AGT→AGA) | ydcI ← | DNA‑binding transcriptional dual regulator YdcI |
| RA | 1,497,385 | 4 bp→CAA | coding (530‑533/1656 nt) | opgD → | glucans biosynthesis protein D |
| RA | 1,629,247 | C→T | I11I (ATC→ATT) | ydfZ → | putative selenoprotein YdfZ |
| RA | 1,643,679 | A→T | L209Q (CTG→CAG) | ydfU ← | protein YdfU |
| RA | 1,652,331 | T→C | intergenic (+2346/+397) | ydfD → / ← ynfP | lysis protein/protein YnfP |
| RA | 1,667,460 | G→A | Q369* (CAG→TAG) | mlc ← | DNA‑binding transcriptional repressor Mlc |
| RA | 1,726,446 | G→A | E142K (GAA→AAA) | nemR → | DNA‑binding transcriptional repressor NemR |
| RA | 1,748,841 | C→T | R240K (AGA→AAA) | ydhT ← | uncharacterized protein YdhT |
| RA | 1,751,024 | C→A | intergenic (‑11/+53) | ydhX ← / ← ydhW | putative 4Fe‑4S ferredoxin‑like protein YdhX/uncharacterized protein YdhW |
| RA | 1,848,300 | 2 bp→TT | coding (376‑377/552 nt) | ydjA ← | putative oxidoreductase YdjA |
| RA | 1,866,507 | G→A | intergenic (‑35/‑401) | mipA ← / → yeaG | MltA‑interacting protein/protein kinase YeaG |
| JC JC | 1,879,829 | Δ1 bp :: IS186 (+) +6 bp :: Δ1 bp | coding (115‑120/360 nt) | yeaR ← | DUF1971 domain‑containing protein YeaR |
| RA | 1,894,839 | T→C | L12P (CTC→CCC) | pabB → | aminodeoxychorismate synthase subunit 1 |
| RA | 1,962,172 | C→T | A67A (GCC→GCT) | yecT → | protein YecT |
| MC JC | 1,978,503 | Δ776 bp | insB5–insA5 | insB5, insA5 | |
| RA | 2,002,087 | C→T | noncoding (20/195 nt) | fliX ← | small RNA FliX |
| RA | 2,008,395 | C→T | A40V (GCT→GTT) | yedE → | putative selenium transporter YedE |
| RA | 2,010,068 | C→T | T83I (ACC→ATC) | yedK → | genome maintenance protein |
| RA | 2,023,559 | A→G | T223A (ACT→GCT) | fliR → | flagellar biosynthesis protein FliR |
| RA | 2,027,332 | T→A | E229V (GAA→GTA) | dgcQ ← | diguanylate cyclase DgcQ |
| RA | 2,029,550 | C→T | R4R (CGC→CGT) | yedA → | putative transporter YedA |
| RA | 2,031,160 | C→T | E386E (GAG→GAA) | dcm ← | DNA‑cytosine methyltransferase |
| RA | 2,032,183 | C→T | W45* (TGG→TGA) | dcm ← | DNA‑cytosine methyltransferase |
| RA | 2,033,648 | C→T | intergenic (‑227/‑1) | drpB ← / → rseX | cell division protein DrpB/small regulatory RNA RseX |
| RA | 2,040,433 | C→A | A319D (GCC→GAC) | msrP → | protein‑L‑methionine sulfoxide reductase catalytic subunit MsrP |
| RA | 2,041,278 | G→A | intergenic (+160/‑97) | msrQ → / → zinT | membrane‑bound flavocytochrome MsrQ/metal‑binding protein ZinT |
| RA | 2,046,403 | C→T | A489V (GCT→GTT) | yeeJ → | inverse autotransporter adhesin |
| RA | 2,052,885 | G→A | intergenic (+871/‑758) | yeeJ → / → shiA | inverse autotransporter adhesin/shikimate:H(+) symporter |
| RA | 2,072,022 | (G)5→4 | coding (484/3120 nt) | flu → | self recognizing antigen 43 (Ag43) autotransporter |
| RA | 2,142,598 | G→A | L117L (CTC→CTT) | udk ← | uridine/cytidine kinase |
| JC JC | 2,168,341 | IS5 (–) +4 bp | intergenic (‑35/‑368) | yegR ← / → yegS | uncharacterized protein YegR/lipid kinase YegS |
| RA | 2,171,384 | A→C | K285Q (AAG→CAG) | insF5 → | IS3 element protein InsF |
| MC JC | 2,171,429 | Δ5,958 bp | IS3‑mediated | [gatR]–gatY | [gatR], gatD, gatB, gatA, gatZ, gatY |
| RA | 2,233,609 | C→T | Q4* (CAG→TAG) | yeiS → | DUF2542 domain‑containing protein YeiS |
| RA | 2,242,247 | C→T | G241R (GGG→AGG) | yeiB ← | DUF418 domain‑containing protein YeiB |
| RA | 2,247,134 | A→C | Y467D (TAC→GAC) | lysP ← | lysine:H(+) symporter |
| RA | 2,264,241 | T→C | F127L (TTT→CTT) | setB → | sugar exporter SetB |
| RA | 2,281,855 | T→C | G408G (GGT→GGC) | radD → | putative DNA repair helicase RadD |
| RA | 2,281,954 | C→A | N441K (AAC→AAA) | radD → | putative DNA repair helicase RadD |
| RA | 2,350,932 | T→C | D27G (GAC→GGC) | glpQ ← | glycerophosphoryl diester phosphodiesterase GlpQ |
| RA | 2,402,846 | A→G | F334L (TTC→CTC) | nuoC ← | NADH:quinone oxidoreductase subunit CD |
| RA | 2,404,402 | G→A | S71L (TCG→TTG) | nuoB ← | NADH:quinone oxidoreductase subunit B |
| RA | 2,556,984 | G→A | T105I (ACC→ATC) | eutC ← | ethanolamine ammonia‑lyase subunit beta |
| MC JC | 2,558,699 | Δ6,790 bp | intZ–[eutA] | intZ, yffL, yffM, yffN, yffO, yffP, yffQ, yffR, yffS, [eutA] | |
| RA | 2,587,112 | C→T | A461V (GCA→GTA) | narQ → | sensor histidine kinase NarQ |
| RA | 2,609,473 | G→A | L329L (CTG→CTA) | hyfG → | hydrogenase 4 catalytic subunit HyfG |
| RA | 2,661,790 | G→A | S114S (AGC→AGT) | iscR ← | DNA‑binding transcriptional dual regulator IscR |
| RA | 2,681,850 | G→A | A299V (GCG→GTG) | yphG ← | DUF5107 domain‑containing protein YphG |
| RA | 2,774,947 | G→A | G544S (GGT→AGT) | yfjW → | uncharacterized protein YfjW |
| RA | 2,867,455 | G→A | Q33* (CAG→TAG) | rpoS ← | RNA polymerase sigma factor RpoS |
| RA | 2,880,635 | T→C | L138L (TTA→TTG) | casD ← | type I‑E CRISPR system Cascade subunit CasD |
| RA | 2,926,772 | C→A | G155G (GGC→GGA) | ppnN → | nucleotide 5'‑monophosphate nucleosidase |
| RA | 2,949,982 | G→A | T247T (ACG→ACA) | argA → | N‑acetylglutamate synthase |
| RA | 3,025,601 | (T)5→4 | coding (1251/1401 nt) | xanQ → | xanthine:H(+) symporter XanQ |
| RA | 3,070,858 | T→G | K129N (AAA→AAC) | fbaA ← | fructose‑bisphosphate aldolase class II |
| RA | 3,087,508 | C→T | P268L (CCA→CTA) | metK → | methionine adenosyltransferase |
| MC JC | 3,131,341 | Δ16,739 bp | IS5‑mediated | [yghQ]–[gpr] | 18 genes [yghQ], yghR, yghS, yghT, pitB, gss, yghU, hybG, hybF, hybE, hybD, hybC, hybB, hybA, hybO, yghW, yqhI, [gpr] |
| RA | 3,167,148 | G→A | H191Y (CAT→TAT) | ygiS ← | putative deoxycholate binding periplasmic protein |
| RA | 3,187,471 | C→A | pseudogene (40/2434 nt) | yqiG → | putative outer membrane usher protein YqiG |
| RA | 3,207,549 | Δ1 bp | coding (179/606 nt) | ttdB → | L(+)‑tartrate dehydratase subunit beta |
| RA | 3,253,635 | G→A | R194C (CGT→TGT) | yhaJ ← | DNA‑binding transcriptional activator YhaJ |
| RA | 3,279,276 | C→G | F121L (TTC→TTG) | kbaZ → | putative tagatose‑1,6‑bisphosphate aldolase 1 chaperone |
| RA | 3,296,481 | G→A | V25M (GTG→ATG) | dolP → | division and outer membrane stress‑associated lipid‑binding lipoprotein |
| RA | 3,388,041 | T→G | T50P (ACG→CCG) | aaeB ← | aromatic carboxylic acid efflux pump subunit AaeB |
| RA | 3,474,425 | T→G | K43T (AAA→ACA) | rpsL ← | 30S ribosomal subunit protein S12 |
| RA | 3,486,178 | A→G | H20R (CAC→CGC) | crp → | DNA‑binding transcriptional dual regulator CRP |
| RA | 3,511,420 | C→T | M1M (ATG→ATA) † | yhfY ← | PRD domain‑containing protein YhfY |
| RA | 3,511,466 | C→T | V293V (GTG→GTA) | yhfZ ← | putative DNA‑binding transcriptional regulator YhfZ |
| RA | 3,515,876 | C→T | G13D (GGC→GAC) | dam ← | DNA adenine methyltransferase |
| RA | 3,535,436 | C→T | V145I (GTA→ATA) | envZ ← | sensor histidine kinase EnvZ |
| RA | 3,560,455 | +G | intergenic (+589/+167) | rtcR → / ← glpG | DNA‑binding transcriptional activator RtcR/rhomboid protease GlpG |
| RA | 3,705,350 | C→T | W147* (TGG→TGA) | dppB ← | dipeptide ABC transporter membrane subunit DppB |
| RA | 3,748,508 | (A)8→7 | coding (1425/1497 nt) | lyxK → | L‑xylulose kinase |
| RA | 3,770,539 | C→T | V281M (GTG→ATG) | yibH ← | inner membrane protein YibH |
| RA | 3,773,173 | Δ1 bp | coding (893/1914 nt) | mtlA → | mannitol‑specific PTS enzyme IICBA component |
| RA | 3,773,176 | C→T | S299F (TCT→TTT) | mtlA → | mannitol‑specific PTS enzyme IICBA component |
| RA | 3,815,883 | +C | coding (667/687 nt) | rph ← | truncated RNase PH |
| RA | 3,841,587 | G→A | G51G (GGC→GGT) | nepI ← | purine ribonucleoside exporter |
| RA | 3,926,991 | G→A | L5L (CTG→TTG) | asnC ← | DNA‑binding transcriptional dual regulator AsnC |
| RA | 3,934,947 | A→G | E390E (GAA→GAG) | rbsA → | ribose ABC transporter ATP binding subunit |
| RA | 3,935,143 | C→T | P456S (CCA→TCA) | rbsA → | ribose ABC transporter ATP binding subunit |
| RA | 3,966,530 | 2 bp→TT | coding (114‑115/1260 nt) | rho → | transcription termination factor Rho |
| JC JC | 4,044,847 | IS5 (+) +4 bp | coding (649‑652/1431 nt) | yihF → | DUF945 domain‑containing protein YihF |
| RA | 4,083,569 | C→T | A752T (GCA→ACA) | fdoG ← | formate dehydrogenase O subunit alpha |
| JC JC | 4,124,494 | IS2 (+) +5 bp | intergenic (‑38/+114) | cytR ← / ← priA | DNA‑binding transcriptional repressor CytR/primosomal protein N' |
| RA | 4,164,738 | A→G | Q367R (CAA→CGA) | btuB → | cobalamin outer membrane transporter |
| RA | 4,223,638 | T→C | intergenic (‑10/‑190) | iclR ← / → metH | DNA‑binding transcriptional repressor IclR/cobalamin‑dependent methionine synthase |
| RA | 4,296,381 | +GC | intergenic (+587/+55) | gltP → / ← yjcO | glutamate/aspartate : H(+) symporter GltP/Sel1 repeat‑containing protein YjcO |
| RA | 4,322,288 | A→G | F45F (TTT→TTC) | phnF ← | putative transcriptional regulator PhnF |
| RA | 4,325,000 | C→T | G56S (GGC→AGC) | phnC ← | phosphonate/phosphate ABC transporter ATP binding subunit |
| RA | 4,325,644 | C→T | S33N (AGC→AAC) | yjdN ← | PF06983 family protein YjdN |
| RA | 4,331,890 | C→T | L463L (CTC→CTT) | proP → | osmolyte:H(+) symporter ProP |
| RA | 4,437,890 | C→T | Q62* (CAG→TAG) | ytfI → | protein YtfI |
| RA | 4,473,900 | C→T | G52R (GGA→AGA) | bdcA ← | c‑di‑GMP‑binding biofilm dispersal mediator protein |
| RA | 4,475,493 | T→C | F19F (TTT→TTC) | yjgL → | protein YjgL |
| RA | 4,476,605 | G→A | S390N (AGC→AAC) | yjgL → | protein YjgL |
| RA | 4,489,016 | C→T | E350K (GAA→AAA) | yjgR ← | DUF853 domain‑containing protein YjgR |
| RA | 4,510,238 | T→G | intergenic (+445/+452) | insO → / ← fecE | IS911B regulator fragment/ferric citrate ABC transporter ATP binding subunit |
| RA | 4,546,601 | C→T | I502I (ATC→ATT) | fimD → | type I fimbriae usher protein |
| RA | 4,620,453 | C→T | A284V (GCC→GTC) | deoB → | phosphopentomutase |
| Unassigned missing coverage evidence | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 525643 | 526517–525873 | 231–875 | 56 [54] | [54] 57 | rhsD | protein RhsD |
| * | * | ÷ | NC_000913 | 1196302 | 1211473 | 15172 | 57 [53] | [55] 57 | [icd]–mcrA | [icd],C0293,ymfD,ymfE,lit,intE,xisE,ymfH,ymfI,ymfJ,ymfK,ymfT,ymfL,ymfM,ymfN,ymfR,beeE,ymfQ,ycfK,tfaP,tfaE,pinE,mcrA |
| * | * | ÷ | NC_000913 | 3423817–3424234 | 3424462–3424238 | 5–646 | 56 [55] | [52] 57 | [rrlD] | [rrlD] |
| Unassigned new junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 244134 = | 222 (1.050) | 288 (1.420) | 210/430 | 0.0 | 56.9% | intergenic (+13/‑193) | gmhA/yafJ | D‑sedoheptulose 7‑phosphate isomerase/putative glutamine amidotransferase YafJ |
| ? | NC_000913 | = 377392 | 224 (1.110) | intergenic (+81/+143) | yaiL/frmB | DUF2058 domain‑containing protein YaiL/S‑formylglutathione hydrolase FrmB | |||||
| * | ? | NC_000913 | = 249545 | 291 (1.380) | 275 (1.350) | 195/434 | 0.0 | 48.6% | intergenic (+1411/‑1353) | rayT/dinB | REP‑associated tyrosine transposase/DNA polymerase IV |
| ? | NC_000913 | 373870 = | 299 (1.470) | coding (950/951 nt) coding (3/1014 nt) |
mhpF mhpE |
acetaldehyde dehydrogenase (acetylating) MhpF 4‑hydroxy‑2‑oxovalerate aldolase |
|||||
| * | ? | NC_000913 | = 257907 | 6 (0.030) | 190 (0.940) | 154/432 | 0.2 | 98.5% | intergenic (+8/+16) | crl/insB9 | RNA polymerase holoenzyme assembly factor Crl/IS1 family transposase B |
| ? | NC_000913 | 258684 = | 0 (0.000) | pseudogene (9/331 nt) | crl | RNA polymerase holoenzyme assembly factor Crl | |||||
| * | ? | NC_000913 | = 1299498 | 0 (0.000) | 89 (0.430) | 86/440 | 1.7 | 100% | intergenic (+253/‑69) | ychE/insH21 | MarC family putative inner membrane protein YchE/IS5 family transposase and trans‑activator |
| ? | NC_000913 | 1300698 = | 0 (0.000) | intergenic (+151/‑484) | insH21/oppA | IS5 family transposase and trans‑activator/oligopeptide ABC transporter periplasmic binding protein | |||||