mutation predictions | marginal predictions | summary statistics | genome diff | command line log
|
breseq version 0.39.0
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Predicted mutations | |||||
|---|---|---|---|---|---|
| evidence | position | mutation | annotation | gene | description |
| RA | 1,903 | G→A | E523K (GAA→AAA) | thrA → | fused aspartate kinase/homoserine dehydrogenase 1 |
| RA | 10,696 | C→T | A221T (GCC→ACC) | yaaW ← | putative enzyme‑specific chaperone YaaW |
| RA | 23,501 | C→T | L371L (CTG→TTG) | ileS → | isoleucine‑‑tRNA ligase |
| RA | 31,683 | C→T | N289N (AAC→AAT) | carB → | carbamoyl‑phosphate synthetase large subunit |
| RA | 42,108 | G→A | intergenic (‑177/‑295) | caiT ← / → fixA | L‑carnitine:gamma‑butyrobetaine antiporter/putative electron transfer flavoprotein FixA |
| RA | 59,968 | C→T | V127I (GTC→ATC) | rluA ← | 23S rRNA pseudouridine(746) and tRNA pseudouridine(32) synthase |
| RA | 76,249 | G→A | Q351* (CAA→TAA) | sgrR ← | DNA‑binding transcriptional dual regulator SgrR |
| RA | 88,571 | G→A | V182M (GTG→ATG) | cra → | DNA‑binding transcriptional dual regulator Cra |
| RA | 113,695 | G→A | W84* (TGG→TGA) | guaC → | GMP reductase |
| RA | 156,068 | A→G | V45A (GTA→GCA) | yadV ← | putative fimbrial chaperone YadV |
| RA | 157,585 | C→T | D50N (GAT→AAT) | folK ← | 2‑amino‑4‑hydroxy‑6‑ hydroxymethyldihydropteridine diphosphokinase |
| RA | 224,625 | T→A | noncoding (855/1542 nt) | rrsH → | 16S ribosomal RNA |
| MC JC | 366,181 | Δ93 bp | coding (33‑125/3075 nt) | lacZ ← | beta‑galactosidase |
| MC JC | 402,391 | Δ723 bp | coding (645‑1367/1416 nt) | phoA → | alkaline phosphatase |
| RA | 466,148 | G→A | P389S (CCA→TCA) | ybaE ← | uncharacterized protein YbaE |
| RA | 469,271 | G→A | G134E (GGG→GAG) | mdlA → | ABC transporter family protein MdlA |
| RA | 480,295 | 2 bp→AA | coding (13‑14/219 nt) | hha ← | hemolysin expression‑modulating protein Hha |
| RA | 502,232 | G→A | T336I (ACC→ATC) | ybaL ← | putative transporter YbaL |
| RA | 662,269 | C→T | D4N (GAT→AAT) | lipB ← | lipoyl(octanoyl) transferase |
| RA | 696,470 | C→T | noncoding (35/75 nt) | glnX ← | tRNA‑Gln |
| RA | 784,677 | G→A | A49A (GCC→GCT) | zitB ← | Zn(2(+))/Cd(2(+))/Ni(2(+))/Cu(2(+)) exporter |
| RA | 881,531 | A→T | I269F (ATC→TTC) | dacC → | D‑alanyl‑D‑alanine carboxypeptidase DacC |
| RA | 1,015,891 | C→T | intergenic (+9/+61) | rmf → / ← fabA | ribosome modulation factor/beta‑hydroxyacyl‑acyl carrier protein dehydratase/isomerase |
| JC JC | 1,091,173 | IS5 (–) +4 bp | coding (1114‑1117/2424 nt) | pgaA ← | partially deacetylated poly‑beta‑1,6‑N‑acetyl‑D‑glucosamine export outer membrane porin |
| RA | 1,137,212 | C→T | R313R (CGC→CGT) | flgI → | flagellar P‑ring protein |
| RA | 1,138,130 | C→T | P254S (CCG→TCG) | flgJ → | putative peptidoglycan hydrolase FlgJ |
| RA | 1,147,196 | C→T | P135S (CCG→TCG) | yceD → | DUF177 domain‑containing protein YceD |
| RA | 1,156,913 | G→A | G46D (GGT→GAT) | ycfH → | putative metal‑dependent hydrolase YcfH |
| RA | 1,169,836 | A→G | L180P (CTG→CCG) | ldtC ← | L,D‑transpeptidase LdtC |
| RA | 1,174,883 | C→T | A95T (GCG→ACG) | ycfT ← | inner membrane protein YcfT |
| RA | 1,175,517 | A→G | T31A (ACC→GCC) | lolC → | lipoprotein release complex ‑ inner membrane subunit |
| RA | 1,188,861 | C→T | V306I (GTA→ATA) | phoQ ← | sensor histidine kinase PhoQ |
| RA | 1,189,980 | A→G | T156T (ACT→ACC) | phoP ← | DNA‑binding transcriptional dual regulator PhoP |
| RA | 1,191,644 | C→T | E115K (GAA→AAA) | purB ← | adenylosuccinate lyase |
| RA | 1,197,637 | C→T | G201S (GGT→AGT) | ymfE ← | uncharacterized protein YmfE |
| JC JC | 1,199,869 | IS3 (+) +3 bp | coding (936‑938/1128 nt) | intE ← | putative integrase |
| RA | 1,235,755 | C→T | S496N (AGC→AAC) | ycgB ← | PF04293 family protein YcgB |
| RA | 1,239,343 | C→T | T155T (ACC→ACT) | dadX → | alanine racemase 2 |
| RA | 1,250,264 | C→T | G192D (GGT→GAT) | dhaK ← | dihydroxyacetone kinase subunit K |
| RA | 1,257,135 | C→T | A226A (GCG→GCA) | ychF ← | redox‑responsive ATPase YchF |
| RA | 1,268,367 | C→T | S68F (TCT→TTT) | kdsA → | 3‑deoxy‑D‑manno‑octulosonate 8‑phosphate synthase |
| RA | 1,269,702 | C→T | intergenic (+313/+1) | rdlA → / ← ldrB | putative antisense regulatory RNA RdlA/small toxic polypeptide LdrB |
| RA | 1,282,627 | C→T | Q922* (CAG→TAG) | narG → | nitrate reductase A subunit alpha |
| RA | 1,290,669 | G→A | W143* (TGG→TAG) | rssB → | regulator of RpoS |
| JC JC | 1,301,050 | IS1 (+) +9 bp | intergenic (+503/‑124) | insH21 → / → oppA | IS5 family transposase and trans‑activator/oligopeptide ABC transporter periplasmic binding protein |
| RA | 1,301,992 | A→T | N271Y (AAT→TAT) | oppA → | oligopeptide ABC transporter periplasmic binding protein |
| RA | 1,306,736 | T→G | S325A (TCC→GCC) | oppF → | murein tripeptide ABC transporter/oligopeptide ABC transporter ATP binding subunit OppF |
| RA | 1,310,770 | A→G | H32H (CAT→CAC) | yciI ← | protein YciI |
| RA | 1,321,672 | C→T | T425T (ACG→ACA) | trpE ← | anthranilate synthase subunit TrpE |
| RA | 1,322,759 | G→A | A63V (GCT→GTT) | trpE ← | anthranilate synthase subunit TrpE |
| RA | 1,335,123 | C→T | intergenic (+294/‑25) | cysB → / → ymiA | DNA‑binding transcriptional dual regulator CysB/uncharacterized protein YmiA |
| RA | 1,336,353 | C→T | P175S (CCA→TCA) | acnA → | aconitate hydratase 1 |
| RA | 1,337,394 | A→G | S522G (AGC→GGC) | acnA → | aconitate hydratase 1 |
| RA | 1,358,859 | T→C | Y110C (TAT→TGT) | puuP ← | putrescine:H(+) symporter PuuP |
| RA | 1,384,652 | A→G | D179G (GAC→GGC) | ycjX → | DUF463 domain‑containing protein YcjX |
| RA | 1,387,908 | C→T | P397S (CCG→TCG) | tyrR → | DNA‑binding transcriptional dual regulator TyrR |
| RA | 1,395,566 | C→T | S119S (TCG→TCA) | ynaI ← | small conductance mechanosensitive channel YnaI |
| RA | 1,399,069 | C→T | G153D (GGC→GAC) | fnr ← | DNA‑binding transcriptional dual regulator FNR |
| JC JC | 1,399,590 | IS5 (+) +4 bp | intergenic (‑64/+128) | fnr ← / ← ogt | DNA‑binding transcriptional dual regulator FNR/methylated‑DNA‑‑[protein]‑cysteine S‑methyltransferase |
| RA | 1,401,893 | G→A | Q455* (CAA→TAA) | abgB ← | p‑aminobenzoyl‑glutamate hydrolase subunit B |
| RA | 1,405,569 | C→T | R277W (CGG→TGG) | abgR → | putative LysR‑type DNA‑binding transcriptional regulator AbgR |
| RA | 1,418,807 | C→T | T46I (ACT→ATT) | sieB → | phage superinfection exclusion protein |
| RA | 1,419,414 | C→T | G15S (GGT→AGT) | ydaG ← | uncharacterized protein YdaG |
| RA | 1,428,107 | C→T | G207D (GGT→GAT) | insH5 ← | IS5 family transposase and trans‑activator |
| RA | 1,430,310 | C→T | A421V (GCT→GTT) | stfR → | putative prophage side tail fiber protein StfR |
| RA | 1,441,765 | C→T | intergenic (‑22/+89) | hslJ ← / ← ldhA | lipoprotein implicated in Novobiocin resistance/D‑lactate dehydrogenase |
| RA | 1,453,992 | G→A | W22* (TGG→TGA) | paaA → | phenylacetyl‑CoA 1,2‑epoxidase, monooxygenase subunit |
| RA | 1,460,345 | C→T | A431V (GCC→GTC) | paaH → | 3‑hydroxyadipyl‑CoA dehydrogenase |
| RA | 1,491,105 | C→T | T68T (ACC→ACT) | cybB → | superoxide oxidase |
| RA | 1,501,974 | C→T | T138I (ACC→ATC) | tehB → | tellurite methyltransferase |
| RA | 1,514,985 | C→T | A75V (GCG→GTG) | ydcV → | putative ABC transporter membrane subunit YdcV |
| RA | 1,520,526 | C→T | R89C (CGC→TGC) | mcbR → | DNA‑binding transcriptional dual regulator McbR |
| RA | 1,531,318 | C→T | intergenic (‑814/‑498) | yncO ← / → ydcC | protein YncO/H repeat‑associated putative transposase YdcC |
| RA | 1,534,321 | C→T | P100S (CCA→TCA) | nhoA → | arylamine N‑acetyltransferase |
| RA | 1,536,304 | C→T | G105D (GGC→GAC) | narV ← | nitrate reductase Z subunit gamma |
| RA | 1,587,323 | C→T | A138T (GCC→ACC) | ydeQ ← | putative fimbrial adhesin protein YdeQ |
| RA | 1,597,364 | T→C | intergenic (‑4922/+1253) | hipB ← / ← lsrK | antitoxin/DNA‑binding transcriptional repressor HipB/autoinducer‑2 kinase |
| RA | 1,626,475 | C→T | R302R (CGG→CGA) | dcp ← | peptidyl‑dipeptidase Dcp |
| RA | 1,643,679 | A→T | L209Q (CTG→CAG) | ydfU ← | protein YdfU |
| RA | 1,652,331 | T→C | intergenic (+2346/+397) | ydfD → / ← ynfP | lysis protein/protein YnfP |
| RA | 1,715,661 | C→T | D77N (GAT→AAT) | pdxY ← | pyridoxal kinase 2 |
| RA | 1,738,631 | T→C | L263P (CTG→CCG) | purR → | DNA‑binding transcriptional repressor PurR |
| RA | 1,743,164 | C→T | E27K (GAG→AAG) | ribC ← | riboflavin synthase |
| RA | 1,776,100 | G→A | E172K (GAA→AAA) | ydiF → | putative acetate‑CoA transferase YdiF |
| RA | 1,786,965 | C→T | A50T (GCC→ACC) | ppsA ← | phosphoenolpyruvate synthetase |
| RA | 1,790,949 | C→T | G99D (GGC→GAC) | selO ← | protein adenylyltransferase SelO |
| RA | 1,791,057 | C→T | G63D (GGT→GAT) | selO ← | protein adenylyltransferase SelO |
| RA | 1,795,562 | C→T | D795N (GAT→AAT) | pheT ← | phenylalanine‑‑tRNA ligase subunit beta |
| RA | 1,798,171 | C→T | D258N (GAC→AAC) | pheS ← | phenylalanine‑‑tRNA ligase subunit alpha |
| RA | 1,812,346 | C→T | G263R (GGA→AGA) | ydjO ← | protein YdjO |
| RA | 1,828,654 | C→T | G361R (GGG→AGG) | astD ← | aldehyde dehydrogenase |
| RA | 1,844,146 | C→T | A242A (GCG→GCA) | ynjI ← | DUF1266 domain‑containing protein YnjI |
| RA | 1,847,969 | C→T | G14R (GGA→AGA) | selD ← | selenide, water dikinase |
| RA | 1,853,057 | C→T | G308D (GGC→GAC) | ydjE ← | putative transporter YdjE |
| RA | 1,853,977 | C→T | M1M (ATG→ATA) † | ydjE ← | putative transporter YdjE |
| RA | 1,866,420 | C→T | G18D (GGC→GAC) | mipA ← | MltA‑interacting protein |
| RA | 1,876,099 | C→T | L143L (CTG→TTG) | nimT → | 2‑nitroimidazole exporter |
| RA | 1,878,855 | C→T | A28V (GCT→GTT) | yoaK → | putative membrane protein YoaK |
| RA | 1,881,623 | C→T | E63K (GAA→AAA) | dmlR ← | DNA‑binding transcriptional regulator DmlR |
| RA | 1,894,839 | T→C | L12P (CTC→CCC) | pabB → | aminodeoxychorismate synthase subunit 1 |
| RA | 1,906,796 | C→T | V89M (GTG→ATG) | rlmA ← | 23S rRNA m(1)G745 methyltransferase |
| JC JC | 1,909,925 | IS5 (+) +4 bp | coding (172‑175/792 nt) | kdgR ← | DNA‑binding transcriptional repressor KdgR |
| RA | 1,940,095 | C→T | M33I (ATG→ATA) | lpxM ← | Lipid A biosynthesis myristoyltransferase |
| RA | 1,948,824 | C→T | A567T (GCA→ACA) | aspS ← | aspartate‑‑tRNA ligase |
| RA | 1,955,010 | G→A | D666D (GAC→GAT) | torZ ← | trimethylamine N‑oxide reductase 2 |
| RA | 1,969,982 | C→T | A335T (GCG→ACG) | tap ← | methyl‑accepting chemotaxis protein Tap |
| RA | 1,994,637 | A→G | Y24H (TAC→CAC) | uvrC ← | UvrABC excision nuclease subunit C |
| RA | 2,033,271 | C→T | V51M (GTG→ATG) | drpB ← | cell division protein DrpB |
| RA | 2,040,289 | C→T | A271V (GCG→GTG) | msrP → | protein‑L‑methionine sulfoxide reductase catalytic subunit MsrP |
| RA | 2,040,433 | C→A | A319D (GCC→GAC) | msrP → | protein‑L‑methionine sulfoxide reductase catalytic subunit MsrP |
| RA | 2,041,411 | G→A | G13S (GGT→AGT) | zinT → | metal‑binding protein ZinT |
| RA | 2,046,506 | G→T | V523V (GTG→GTT) | yeeJ → | inverse autotransporter adhesin |
| RA | 2,064,246 | C→T | E74E (GAG→GAA) | cobT ← | nicotinate‑nucleotide‑‑dimethylbenzimidazole phosphoribosyltransferase |
| RA | 2,064,616 | C→T | A203T (GCT→ACT) | cobS ← | cobalamin 5'‑phosphate synthase |
| RA | 2,080,405 | C→T | G63S (GGT→AGT) | yeeA ← | putative transporter YeeA |
| RA | 2,082,863 | C→T | T36T (ACC→ACT) | sbcB → | exodeoxyribonuclease I |
| RA | 2,083,929 | C→T | P392S (CCG→TCG) | sbcB → | exodeoxyribonuclease I |
| RA | 2,084,330 | C→T | A42T (GCA→ACA) | tsuB ← | putative thiosulfate sulfurtransferase |
| RA | 2,085,319 | G→A | A69A (GCC→GCT) | tsuA ← | thiosulfate transporter |
| RA | 2,086,634 | G→A | A143A (GCC→GCT) | plaP ← | putrescine:H(+) symporter PlaP |
| RA | 2,103,891 | G→A | P207S (CCA→TCA) | wbbK ← | putative glycosyltransferase WbbK |
| RA | 2,111,259 | Δ1 bp | coding (718/900 nt) | rfbD ← | dTDP‑4‑dehydrorhamnose reductase |
| RA | 2,122,908 | G→A | I24I (ATC→ATT) | cpsG ← | phosphomannomutase |
| RA | 2,134,498 | G→A | V385V (GTC→GTT) | wzc ← | protein‑tyrosine kinase Wzc |
| RA | 2,137,543 | G→A | intergenic (‑300/‑359) | wza ← / → yegH | outer membrane polysaccharide export protein Wza/inner membrane protein YegH |
| RA | 2,173,363 | Δ2 bp | intergenic (‑490/+918) | gatD ← / ← gatB | galactitol‑1‑phosphate 5‑dehydrogenase/galactitol‑specific PTS enzyme IIB component |
| RA | 2,173,448 | C→T | intergenic (‑575/+834) | gatD ← / ← gatB | galactitol‑1‑phosphate 5‑dehydrogenase/galactitol‑specific PTS enzyme IIB component |
| JC JC | 2,174,359 | IS5 (+) +4 bp | coding (205‑208/285 nt) | gatB ← | galactitol‑specific PTS enzyme IIB component |
| RA | 2,188,087 | T→C | T110A (ACG→GCG) | yehA ← | putative fimbrial adhesin YehA |
| RA | 2,329,209 | A→G | W197R (TGG→CGG) | yfaQ ← | tandem DUF2300 domain‑containing protein YfaQ |
| RA | 2,339,162 | C→T | D87N (GAC→AAC) | gyrA ← | DNA gyrase subunit A |
| RA | 2,384,808 | C→T | K305K (AAG→AAA) | yfbK ← | IPR002035/DUF3520 domain‑containing protein YfbK |
| RA | 2,410,419 | G→A | L312L (CTG→TTG) | yfbS ← | putative transporter YfbS |
| RA | 2,484,827 | C→T | L152F (CTT→TTT) | evgS → | sensor histidine kinase EvgS |
| RA | 2,510,609 | C→T | P327L (CCG→CTG) | yfeO → | putative transport protein YfeO |
| MC JC | 2,558,699 | Δ6,790 bp | intZ–[eutA] | intZ, yffL, yffM, yffN, yffO, yffP, yffQ, yffR, yffS, [eutA] | |
| RA | 2,587,112 | C→T | A461V (GCA→GTA) | narQ → | sensor histidine kinase NarQ |
| RA | 2,732,992 | G→A | I394I (ATC→ATT) I394I (ATC→ATT) |
clpB ← clpB ← |
chaperone protein ClpB chaperone protein ClpB |
| RA | 2,789,286 | G→A | G101D (GGT→GAT) | glaH → | glutarate dioxygenase GlaH |
| RA | 2,804,133 | C→T | S211F (TCT→TTT) | nrdF → | ribonucleoside‑diphosphate reductase 2 subunit beta |
| RA | 2,814,459 | Δ1 bp | coding (275/516 nt) | luxS ← | S‑ribosylhomocysteine lyase |
| RA | 2,814,461 | C→T | L91L (CTG→CTA) | luxS ← | S‑ribosylhomocysteine lyase |
| RA | 2,817,197 | G→A | R103C (CGC→TGC) | yqaB ← | fructose‑1‑phosphate phosphatase YqaB |
| RA | 2,823,288 | C→T | G161D (GGC→GAC) | recA ← | DNA recombination/repair protein RecA |
| RA | 2,867,454 | T→A | Q33L (CAG→CTG) | rpoS ← | RNA polymerase sigma factor RpoS |
| RA | 2,871,153 | T→G | N51T (AAC→ACC) | truD ← | tRNA pseudouridine(13) synthase |
| MC JC | 2,904,103 | Δ61 bp | intergenic (+729/+584) | ygcE → / ← queE | putative sugar kinase YgcE/putative 7‑carboxy‑7‑deazaguanine synthase QueE |
| RA | 2,926,543 | 2 bp→TT | coding (236‑237/1365 nt) | ppnN → | nucleotide 5'‑monophosphate nucleosidase |
| RA | 2,926,772 | C→A | G155G (GGC→GGA) | ppnN → | nucleotide 5'‑monophosphate nucleosidase |
| RA | 3,028,546 | G→A | A156V (GCC→GTC) | ygfS ← | putative electron transport protein YgfS |
| RA | 3,050,472 | G→A | L66L (CTG→TTG) | gcvT ← | aminomethyltransferase |
| RA | 3,061,916 | C→T | A356V (GCC→GTC) | scpA → | methylmalonyl‑CoA mutase |
| RA | 3,065,449 | G→A | L216L (TTG→TTA) | scpC → | propionyl‑CoA:succinate CoA transferase |
| RA | 3,065,861 | G→A | V354I (GTC→ATC) | scpC → | propionyl‑CoA:succinate CoA transferase |
| RA | 3,089,260 | T→C | V326A (GTG→GCG) | galP → | galactose:H(+) symporter |
| RA | 3,090,968 | G→A | E208K (GAG→AAG) | endA → | DNA‑specific endonuclease I |
| RA | 3,104,887 | G→A | S152N (AGC→AAC) | mltC → | membrane‑bound lytic murein transglycosylase C |
| RA | 3,120,786 | G→A | T165I (ACT→ATT) | glcA ← | glycolate/lactate:H(+) symporter GlcA |
| RA | 3,121,033 | T→C | I83V (ATT→GTT) | glcA ← | glycolate/lactate:H(+) symporter GlcA |
| RA | 3,127,981 | G→A | P14L (CCC→CTC) | glcD ← | glycolate dehydrogenase, putative FAD‑linked subunit |
| RA | 3,130,161 | G→A | L19F (CTT→TTT) | yghO ← | putative DNA‑binding transcriptional regulator YghO |
| RA | 3,132,077 | G→A | A111V (GCG→GTG) | yghQ ← | putative transport protein YghQ |
| RA | 3,133,175 | G→A | T13I (ACC→ATC) | yghR ← | putative ATP‑binding protein YghR |
| RA | 3,134,263 | G→A | A45T (GCC→ACC) | yghT → | putative ATP‑binding protein YghT |
| RA | 3,145,944 | G→A | L106L (CTC→CTT) | hybO ← | hydrogenase 2 small subunit |
| RA | 3,150,316 | G→A | E219K (GAG→AAG) | yghA → | NADP(+)‑dependent aldehyde reductase |
| RA | 3,162,216 | G→A | Q152* (CAG→TAG) | ftsP ← | cell division protein FtsP |
| RA | 3,176,625 | G→A | S70F (TCC→TTC) | cpdA ← | cAMP phosphodiesterase |
| RA | 3,179,383 | G→A | K423K (AAG→AAA) | tolC → | outer membrane channel TolC |
| RA | 3,186,297 | G→A | R37R (CGG→CGA) | insC5 → | IS2 insertion element repressor InsA |
| RA | 3,193,351 | G→A | G163E (GGG→GAG) | yqiK → | flotillin family inner membrane protein YqiK |
| RA | 3,204,617 | G→A | intergenic (‑28/‑77) | folB ← / → plsY | dihydroneopterin aldolase/putative glycerol‑3‑phosphate acyltransferase |
| RA | 3,207,549 | Δ1 bp | coding (179/606 nt) | ttdB → | L(+)‑tartrate dehydratase subunit beta |
| RA | 3,219,128 | G→A | intergenic (‑52/‑366) | aer ← / → patA | aerotaxis receptor/putrescine aminotransferase |
| RA | 3,224,895 | C→T | L755L (CTG→TTG) | ebgA → | evolved beta‑D‑galactosidase subunit alpha |
| RA | 3,227,339 | C→T | T369I (ACC→ATC) | ygjI → | putative transporter YgjI |
| RA | 3,240,423 | C→T | G160G (GGC→GGT) | sstT → | serine/threonine:Na(+) symporter |
| RA | 3,256,157 | C→T | Q165Q (CAG→CAA) | cyuA ← | putative L‑cysteine desulfidase CyuA |
| RA | 3,259,283 | G→A | H123Y (CAT→TAT) | tdcG ← | L‑serine deaminase III |
| RA | 3,270,497 | C→T | noncoding (96/377 nt) | rnpB ← | RNase P catalytic RNA component |
| RA | 3,275,902 | A→T | E207D (GAA→GAT) | garD → | GarD |
| RA | 3,292,312 | C→T | P324P (CCC→CCT) | yraK → | putative fimbrial adhesin YraK |
| RA | 3,304,647 | T→C | I391V (ATT→GTT) | mtr ← | tryptophan:H(+) symporter Mtr |
| RA | 3,329,743 | G→T | D261Y (GAT→TAT) | dacB → | peptidoglycan DD‑endopeptidase DacB |
| RA | 3,388,041 | T→G | T50P (ACG→CCG) | aaeB ← | aromatic carboxylic acid efflux pump subunit AaeB |
| RA | 3,506,393 | T→C | D315G (GAC→GGC) | yhfT ← | uncharacterized protein YhfT |
| RA | 3,518,501 | C→T | intergenic (‑15/+42) | aroB ← / ← aroK | 3‑dehydroquinate synthase/shikimate kinase 1 |
| RA | 3,524,184 | C→T | A438A (GCC→GCT) | mrcA → | peptidoglycan glycosyltransferase/peptidoglycan DD‑transpeptidase MrcA |
| RA | 3,558,291 | C→T | G8G (GGC→GGT) | rtcR → | DNA‑binding transcriptional activator RtcR |
| RA | 3,559,621 | C→T | P452S (CCC→TCC) | rtcR → | DNA‑binding transcriptional activator RtcR |
| RA | 3,560,119 | A→G | intergenic (+253/+503) | rtcR → / ← glpG | DNA‑binding transcriptional activator RtcR/rhomboid protease GlpG |
| RA | 3,560,455 | +G | intergenic (+589/+167) | rtcR → / ← glpG | DNA‑binding transcriptional activator RtcR/rhomboid protease GlpG |
| RA | 3,576,313 | A→G | V250A (GTG→GCG) | gntU ← | low‑affinity gluconate transporter |
| RA | 3,579,050 | G→A | A199V (GCC→GTC) | yhhW ← | quercetin 2,3‑dioxygenase |
| RA | 3,581,316 | G→A | G60E (GGA→GAA) | yhhY → | N‑acetyltransferase YhhY |
| RA | 3,581,850 | G→A | intergenic (+224/‑13) | yhhY → / → yhhZ | N‑acetyltransferase YhhY/putative endonuclease YhhZ |
| RA | 3,583,969 | G→A | W98* (TGG→TAG) | insB6 → | IS1 family protein InsB |
| RA | 3,585,517 | G→A | A436V (GCC→GTC) | ggt ← | glutathione hydrolase proenzyme |
| RA | 3,587,531 | G→A | L195F (CTC→TTC) | ugpQ ← | glycerophosphodiester phosphodiesterase UgpQ |
| RA | 3,588,787 | G→A | P132S (CCG→TCG) | ugpC ← | sn‑glycerol 3‑phosphate ABC transporter ATP binding subunit |
| RA | 3,589,956 | G→A | L24L (CTC→CTT) | ugpE ← | sn‑glycerol 3‑phosphate ABC transporter membrane subunit UgpE |
| RA | 3,590,251 | C→T | V221M (GTG→ATG) | ugpA ← | sn‑glycerol 3‑phosphate ABC transporter membrane subunit UgpA |
| RA | 3,618,836 | C→T | V83V (GTC→GTT) | nikR → | DNA‑binding transcriptional repressor NikR |
| RA | 3,621,090 | C→T | R633R (CGC→CGT) | rhsB → | rhs element protein RhsB |
| RA | 3,633,749 | C→T | intergenic (‑1159/‑1092) | yhiJ ← / → yhiM | DUF4049 domain‑containing protein YhiJ/inner membrane protein YhiM |
| RA | 3,647,677 | C→T | intergenic (+26/+28) | gor → / ← dinQ | glutathione reductase (NADPH)/membrane toxin DinQ |
| RA | 3,684,443 | C→T | K392K (AAG→AAA) | pdeK ← | c‑di‑GMP phosphodiesterase PdeK |
| RA | 3,707,947 | C→A | intergenic (‑242/+669) | dppA ← / ← proK | dipeptide ABC transporter periplasmic binding protein/tRNA‑Pro |
| RA | 3,713,979 | C→T | P110S (CCG→TCG) | yiaC → | peptidyl‑lysine N‑acetyltransferase YiaC |
| RA | 3,725,176 | T→G | E48A (GAG→GCG) | glyQ ← | glycine‑‑tRNA ligase subunit alpha |
| RA | 3,744,369 | C→T | A14A (GCC→GCT) | yiaM → | 2,3‑diketo‑L‑gulonate:Na(+) symporter ‑ membrane subunit |
| RA | 3,781,049 | C→T | intergenic (+32/‑166) | lldD → / → trmL | L‑lactate dehydrogenase/tRNA (cytidine/uridine‑2'‑O)‑ribose methyltransferase |
| RA | 3,803,453 | C→T | E229K (GAA→AAA) | waaB ← | UDP‑D‑galactose:(glucosyl)lipopolysaccharide‑1, 6‑D‑galactosyltransferase |
| RA | 3,803,945 | C→T | G65S (GGT→AGT) | waaB ← | UDP‑D‑galactose:(glucosyl)lipopolysaccharide‑1, 6‑D‑galactosyltransferase |
| RA | 3,809,942 | C→T | P40S (CCC→TCC) | coaD → | pantetheine‑phosphate adenylyltransferase |
| RA | 3,815,883 | +C | coding (667/687 nt) | rph ← | truncated RNase PH |
| RA | 3,827,026 | C→T | A606V (GCG→GTG) | recG → | ATP‑dependent DNA helicase RecG |
| RA | 3,829,385 | C→T | S147S (TCC→TCT) | xanP → | xanthine:H(+) symporter XanP |
| RA | 3,834,845 | C→T | S362N (AGT→AAT) | yicJ ← | putative xyloside transporter YicJ |
| RA | 3,850,507 | C→T | A74T (GCG→ACG) | uhpA ← | DNA‑binding transcriptional activator UhpA |
| RA | 3,870,464 | C→T | V423M (GTG→ATG) | dgoT ← | D‑galactonate:H(+) symporter |
| RA | 3,900,610 | C→T | W537* (TGG→TGA) | bglH ← | carbohydrate‑specific outer membrane porin, cryptic |
| RA | 3,904,907 | C→T | E231K (GAA→AAA) | bglF ← | beta‑glucoside specific PTS enzyme II/BglG kinase/BglG phosphatase |
| RA | 3,914,648 | C→T | A185T (GCG→ACG) | glmU ← | fused N‑acetylglucosamine‑1‑phosphate uridyltransferase and glucosamine‑1‑phosphate acetyltransferase |
| RA | 3,926,894 | C→T | G37E (GGG→GAG) | asnC ← | DNA‑binding transcriptional dual regulator AsnC |
| RA | 3,927,292 | T→C | D46D (GAT→GAC) | asnA → | asparagine synthetase A |
| RA | 3,937,909 | G→A | A206T (GCG→ACG) | rbsK → | ribokinase |
| RA | 3,937,997 | G→A | G235D (GGT→GAT) | rbsK → | ribokinase |
| RA | 3,938,441 | Δ1 bp | coding (215/993 nt) | rbsR → | DNA‑binding transcriptional dual regulator RbsR |
| RA | 3,941,874 | C→T | noncoding (67/1542 nt) | rrsC → | 16S ribosomal RNA |
| RA | 3,946,246 | G→A | noncoding (2543/2904 nt) | rrlC → | 23S ribosomal RNA |
| RA | 3,950,099 | C→T | intergenic (‑130/‑223) | yifB ← / → ilvL | putative magnesium chelatase YifB/ilvXGMEDA operon leader peptide |
| RA | 3,956,003 | G→A | D225N (GAT→AAT) | ilvA → | threonine deaminase |
| RA | 4,084,932 | G→T | F297L (TTC→TTA) | fdoG ← | formate dehydrogenase O subunit alpha |
| RA | 4,139,298 | G→A | A137A (GCC→GCT) | fsaB ← | fructose‑6‑phosphate aldolase 2 |
| RA | 4,160,157 | G→A | L212L (CTG→TTG) | sthA ← | soluble pyridine nucleotide transhydrogenase |
| RA | 4,171,728 | C→T | noncoding (92/120 nt) | rrfB → | 5S ribosomal RNA |
| RA | 4,171,781 | A→G | intergenic (+25/‑276) | rrfB → / → murB | 5S ribosomal RNA/UDP‑N‑acetylenolpyruvoylglucosamine reductase |
| RA | 4,175,827 | C→T | noncoding (74/76 nt) | thrT → | tRNA‑Thr |
| RA | 4,178,883 | C→T | A2V (GCT→GTT) | rplA → | 50S ribosomal subunit protein L1 |
| RA | 4,179,001 | C→T | S41S (AGC→AGT) | rplA → | 50S ribosomal subunit protein L1 |
| RA | 4,185,777 | C→T | S143F (TCC→TTC) | rpoC → | RNA polymerase subunit beta' |
| RA | 4,193,177 | C→T | E134K (GAG→AAG) | thiF ← | sulfur carrier protein ThiS adenylyltransferase |
| RA | 4,193,707 | A→G | G166G (GGT→GGC) | thiE ← | thiamine phosphate synthase |
| RA | 4,193,820 | C→T | G129R (GGA→AGA) | thiE ← | thiamine phosphate synthase |
| RA | 4,219,752 | C→T | S386F (TCC→TTC) | aceK → | isocitrate dehydrogenase kinase/phosphatase |
| RA | 4,222,743 | C→T | intergenic (‑256/+61) | arpA ← / ← iclR | regulator of acetyl CoA synthetase/DNA‑binding transcriptional repressor IclR |
| RA | 4,223,638 | T→C | intergenic (‑10/‑190) | iclR ← / → metH | DNA‑binding transcriptional repressor IclR/cobalamin‑dependent methionine synthase |
| RA | 4,224,483 | C→T | S219F (TCC→TTC) | metH → | cobalamin‑dependent methionine synthase |
| RA | 4,234,479 | C→T | A241V (GCG→GTG) | pgi → | glucose‑6‑phosphate isomerase |
| RA | 4,249,684 | C→T | A44V (GCT→GTT) | malM → | maltose regulon periplasmic protein |
| RA | 4,265,668 | C→T | T452I (ACC→ATC) | dnaB → | replicative DNA helicase |
| RA | 4,269,449 | C→T | C12C (TGC→TGT) | aphA → | acid phosphatase/phosphotransferase |
| RA | 4,271,130 | C→T | E914E (GAG→GAA) | uvrA ← | UvrABC excision nuclease subunit A |
| RA | 4,278,488 | C→T | P4S (CCA→TCA) | ghxP → | guanine/hypoxanthine transporter GhxP |
| RA | 4,282,536 | C→T | Q180Q (CAG→CAA) | yjcF ← | pentapeptide repeat‑containing protein YjcF |
| RA | 4,284,077 | C→T | A276T (GCG→ACG) | actP ← | acetate/glycolate:cation symporter |
| RA | 4,286,033 | C→T | A447T (GCG→ACG) | acs ← | acetyl‑CoA synthetase (AMP‑forming) |
| RA | 4,296,187 | C→T | intergenic (+393/+249) | gltP → / ← yjcO | glutamate/aspartate : H(+) symporter GltP/Sel1 repeat‑containing protein YjcO |
| RA | 4,296,300 | C→T | intergenic (+506/+136) | gltP → / ← yjcO | glutamate/aspartate : H(+) symporter GltP/Sel1 repeat‑containing protein YjcO |
| RA | 4,296,381 | +GC | intergenic (+587/+55) | gltP → / ← yjcO | glutamate/aspartate : H(+) symporter GltP/Sel1 repeat‑containing protein YjcO |
| RA | 4,297,469 | C→T | G633D (GGC→GAC) | fdhF ← | formate dehydrogenase H |
| RA | 4,298,199 | C→T | A390T (GCA→ACA) | fdhF ← | formate dehydrogenase H |
| RA | 4,301,071 | C→T | A670T (GCA→ACA) | mdtO ← | putative multidrug efflux pump subunit MdtO |
| RA | 4,303,755 | C→T | V119I (GTT→ATT) | mdtN ← | putative multidrug efflux pump membrane fusion protein |
| RA | 4,311,337 | C→T | A236T (GCA→ACA) | alsB ← | D‑allose ABC transporter periplasmic binding protein |
| RA | 4,320,079 | C→T | Q195Q (CAG→CAA) | phnI ← | carbon‑phosphorus lyase core complex subunit PhnI |
| RA | 4,320,785 | C→T | E155K (GAG→AAG) | phnH ← | carbon‑phosphorus lyase core complex subunit PhnH |
| RA | 4,322,605 | C→T | intergenic (‑183/+731) | phnF ← / ← phnD | putative transcriptional regulator PhnF/phosphonate/phosphate ABC transporter periplasmic binding protein |
| RA | 4,325,644 | C→T | S33N (AGC→AAC) | yjdN ← | PF06983 family protein YjdN |
| RA | 4,325,837 | C→T | intergenic (‑96/+562) | yjdN ← / ← yjdM | PF06983 family protein YjdN/zinc ribbon domain‑containing protein YjdM |
| RA | 4,332,310 | C→T | G321G (GGG→GGA) | basS ← | sensor histidine kinase BasS |
| RA | 4,337,864 | C→T | V22V (GTG→GTA) | adiY ← | DNA‑binding transcriptional activator AdiY |
| RA | 4,342,825 | C→T | N305N (AAC→AAT) | melA → | alpha‑galactosidase |
| RA | 4,349,259 | C→T | intergenic (‑515/+56) | dcuB ← / ← dcuR | anaerobic C4‑dicarboxylate transporter DcuB/DNA‑binding transcriptional activator DcuR |
| RA | 4,351,519 | C→T | T48T (ACG→ACA) | dcuS ← | sensor histidine kinase DcuS |
| RA | 4,351,590 | C→T | V25I (GTC→ATC) | dcuS ← | sensor histidine kinase DcuS |
| RA | 4,359,909 | C→T | W41* (TGG→TGA) | cadB ← | lysine:cadaverine antiporter |
| RA | 4,364,798 | C→T | G82D (GGC→GAC) | dsbD ← | thiol‑disulfide exchange protein DsbD |
| RA | 4,366,668 | C→T | A36T (GCC→ACC) | dcuA ← | C4‑dicarboxylate transporter DcuA |
| RA | 4,371,401 | C→T | A126V (GCT→GTT) | groL → | chaperonin GroEL |
| RA | 4,373,421 | C→T | A272T (GCG→ACG) | yjeJ ← | protein YjeJ |
| RA | 4,380,469 | C→T | E17K (GAA→AAA) | frdB ← | fumarate reductase iron‑sulfur protein |
| RA | 4,388,120 | C→T | A417A (GCG→GCA) | mscM ← | miniconductance mechanosensitive channel MscM |
| RA | 4,389,838 | C→T | V175M (GTG→ATG) | psd ← | phosphatidylserine decarboxylase proenzyme |
| RA | 4,401,607 | C→T | T312T (ACC→ACT) | hflX → | ribosome rescue factor HflX |
| RA | 4,403,010 | C→T | R325C (CGT→TGT) | hflK → | regulator of FtsH protease |
| RA | 4,407,045 | C→T | A131V (GCT→GTT) | rnr → | RNase R |
| RA | 4,414,625 | C→T | R117R (CGC→CGT) | aidB → | putative acyl‑CoA dehydrogenase AidB |
| RA | 4,418,862 | C→T | G255D (GGT→GAT) | ulaG ← | L‑ascorbate‑6‑phosphate lactonase |
| RA | 4,426,929 | C→T | C165Y (TGC→TAC) | yjfZ ← | DUF2686 domain‑containing protein YjfZ |
| RA | 4,433,459 | C→T | G189D (GGC→GAC) | qorB ← | NAD(P)H:quinone oxidoreductase |
| JC JC | 4,434,629 | IS1 (–) +8 bp | coding (1930‑1937/1944 nt) | cpdB ← | 2',3'‑cyclic‑nucleotide 2'‑phosphodiesterase/3'‑nucleotidase |
| RA | 4,435,124 | C→T | W481* (TGG→TAG) | cpdB ← | 2',3'‑cyclic‑nucleotide 2'‑phosphodiesterase/3'‑nucleotidase |
| RA | 4,435,750 | C→T | G272G (GGG→GGA) | cpdB ← | 2',3'‑cyclic‑nucleotide 2'‑phosphodiesterase/3'‑nucleotidase |
| RA | 4,451,280 | C→T | P75S (CCG→TCG) | ytfR → | galactofuranose ABC transporter putative ATP binding subunit |
| RA | 4,457,392 | C→T | E158E (GAG→GAA) | yjgA ← | putative ribosome biogenesis factor YjgA |
| RA | 4,482,901 | C→T | V313M (GTG→ATG) | valS ← | valine‑‑tRNA ligase |
| RA | 4,486,869 | T→A | L218M (TTG→ATG) | lptF → | lipopolysaccharide transport system protein LptF |
| RA | 4,487,022 | C→T | R269C (CGT→TGT) | lptF → | lipopolysaccharide transport system protein LptF |
| RA | 4,489,775 | C→T | V97M (GTG→ATG) | yjgR ← | DUF853 domain‑containing protein YjgR |
| RA | 4,494,499 | C→T | intergenic (‑93/‑124) | idnD ← / → idnK | L‑idonate 5‑dehydrogenase/D‑gluconate kinase, thermosensitive |
| RA | 4,501,500 | C→T | L81L (CTG→TTG) | yjgZ → | uncharacterized protein YjgZ |
| RA | 4,510,238 | T→G | intergenic (+445/+452) | insO → / ← fecE | IS911B regulator fragment/ferric citrate ABC transporter ATP binding subunit |
| RA | 4,517,355 | C→T | Q121Q (CAG→CAA) | fecR ← | ferric citrate regulator FecR |
| RA | 4,524,401 | C→T | G204S (GGC→AGC) | yjhH ← | putative 2‑dehydro‑3‑deoxy‑D‑pentonate aldolase |
| RA | 4,524,596 | C→T | D139N (GAT→AAT) | yjhH ← | putative 2‑dehydro‑3‑deoxy‑D‑pentonate aldolase |
| RA | 4,529,039 | C→T | G402D (GGT→GAT) | sgcC ← | putative PTS enzyme IIC component SgcC |
| RA | 4,530,797 | C→T | Q285Q (CAG→CAA) | sgcX ← | putative endoglucanase with Zn‑dependent exopeptidase domain |
| RA | 4,541,261 | C→T | A102V (GCT→GTT) | fimB → | Type 1 fimbriae regulatory protein FimB |
| JC JC | 4,542,042 | IS1 (+) +8 bp | coding (6‑13/597 nt) | fimE → | regulator for fimA |
| RA | 4,553,671 | C→T | F257F (TTC→TTT) | uxuB → | D‑mannonate oxidoreductase |
| RA | 4,564,385 | C→T | S102N (AGC→AAC) | yjiL ← | putative ATPase, activator of (R)‑hydroxyglutaryl‑CoA dehdratase |
| RA | 4,570,550 | C→T | S342N (AGC→AAC) | yjiR ← | fused putative DNA‑binding transcriptional regulator/putative aminotransferase YjiR |
| RA | 4,571,280 | C→T | E99K (GAG→AAG) | yjiR ← | fused putative DNA‑binding transcriptional regulator/putative aminotransferase YjiR |
| RA | 4,585,673 | C→T | W363* (TGG→TGA) | hsdR ← | type I restriction enzyme EcoKI endonuclease subunit |
| RA | 4,587,365 | C→T | S139S (AGC→AGT) | mrr → | Type IV methyl‑directed restriction enzyme EcoKMrr |
| RA | 4,604,517 | C→T | L120L (CTG→TTG) | bglJ → | DNA‑binding transcriptional regulator BglJ |
| RA | 4,630,295 | C→T | Q76Q (CAG→CAA) | ettA ← | energy‑dependent translational throttle protein EttA |
| RA | 4,636,925 | G→C | R77P (CGC→CCC) | creC → | sensory histidine kinase CreC |
| RA | 4,638,058 | C→T | L455L (CTG→TTG) | creC → | sensory histidine kinase CreC |
| RA | 4,638,240 | G→A | L21L (TTG→TTA) | creD → | putative inner membrane protein CreD |
| Unassigned missing coverage evidence | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 275509 | 359530 | 84022 | 108 [0] | [27] 28 | [mmuP]–[cynS] | [mmuP],mmuM,afuC,insB2,insA2,yagB,yagA,yagE,yagF,yagG,yagH,xynR,argF,argL,ykgS,insB3,insA3,yagJ,yagK,yagL,yagM,ykgV,yagN,intF,yagP,paoD,paoC,paoB,paoA,yagU,ykgJ,ecpE,ecpD,ecpC,ecpB,ecpA,matA,ykgL,ykgO,ykgM,ykgR,insE1,insF1,rclC,rclB,rclA,rclR,ykgE,ykgF,ykgG,ykgH,betA,betB,betI,betT,yahV,pdeL,yahB,yahC,yahD,yahE,yahF,yahG,yahH,yahI,yahJ,yahK,yahL,yahM,yahN,yahO,prpR,prpB,prpC,prpD,prpE,codB,codA,cynR,cynT,[cynS] |
| * | * | ÷ | NC_000913 | 372333 | 372748 | 416 | 28 [27] | [5] 113 | mhpD | 2‑hydroxypentadienoate hydratase |
| * | * | ÷ | NC_000913 | 565829 | 577187 | 11359 | 86 [0] | [1] 100 | [intD]–nmpC | [intD],renD,insE3,insF3,renD,emrE,ylcJ,ybcK,ybcL,ybcM,ylcH,ybcN,ninE,ybcO,rusA,ylcG,quuD,nmpC,insH2,nmpC |
| * | * | ÷ | NC_000913 | 3423857–3424435 | 3424435 | 1–579 | 28 [27] | [27] 28 | [rrlD] | [rrlD] |
| * | * | ÷ | NC_000913 | 3942234–3943395 | 3945374–3944045 | 651–3141 | 28 [27] | [27] 29 | [rrsC]–[rrlC] | [rrsC],gltU,[rrlC] |
| Unassigned new junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 257907 | 2 (0.010) | 121 (0.930) | 100/458 | 0.3 | 99.2% | intergenic (+8/+16) | crl/insB9 | RNA polymerase holoenzyme assembly factor Crl/IS1 family transposase B |
| ? | NC_000913 | 258684 = | 0 (0.000) | pseudogene (9/331 nt) | crl | RNA polymerase holoenzyme assembly factor Crl | |||||
| * | ? | NC_000913 | 273955 = | NA (NA) | 86 (0.640) | 79/474 | 0.7 | 100% | noncoding (1195/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | = 565828 | 0 (0.000) | coding (151/1164 nt) | intD | putative integrase | |||||
| * | ? | NC_000913 | = 275149 | NA (NA) | 99 (0.730) | 88/474 | 0.5 | 99.0% | noncoding (1/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | 577188 = | 1 (0.010) | intergenic (‑363/‑210) | nmpC/essD | putative outer membrane porin NmpC/putative phage lysis protein | |||||
| * | ? | NC_000913 | = 275508 | 0 (0.000) | 108 (0.840) | 93/454 | 0.4 | 100% | coding (184/1404 nt) | mmuP | S‑methyl‑L‑methionine transporter |
| ? | NC_000913 | 372749 = | 0 (0.000) | coding (635/810 nt) | mhpD | 2‑hydroxypentadienoate hydratase | |||||
| * | ? | NC_000913 | 1207790 = | 69 (0.510) | 37 (0.290) | 36/442 | 2.5 | 39.7% | coding (290/630 nt) | ycfK | protein StfP |
| ? | NC_000913 | 1209619 = | 48 (0.380) | intergenic (‑500/‑66) | tfaE/pinE | putative tail fiber assembly protein TfaE/site‑specific DNA recombinase | |||||
| * | ? | NC_000913 | = 1207805 | 61 (0.450) | 63 (0.500) | 57/442 | 1.3 | 54.6% | coding (305/630 nt) | ycfK | protein StfP |
| ? | NC_000913 | = 1209602 | 48 (0.380) | intergenic (‑483/‑83) | tfaE/pinE | putative tail fiber assembly protein TfaE/site‑specific DNA recombinase | |||||
| * | ? | NC_000913 | = 1299498 | 0 (0.000) | 62 (0.470) | 56/466 | 1.5 | 100% | intergenic (+253/‑69) | ychE/insH21 | MarC family putative inner membrane protein YchE/IS5 family transposase and trans‑activator |
| ? | NC_000913 | 1300698 = | 0 (0.000) | intergenic (+151/‑484) | insH21/oppA | IS5 family transposase and trans‑activator/oligopeptide ABC transporter periplasmic binding protein | |||||
| * | ? | NC_000913 | = 1978502 | 0 (0.000) | 55 (0.420) | 49/458 | 1.8 | 100% | intergenic (‑305/+16) | flhD/insB5 | DNA‑binding transcriptional dual regulator FlhD/IS1 family protein InsB |
| ? | NC_000913 | 1979279 = | 0 (0.000) | intergenic (‑64/‑474) | insA5/uspC | IS1 family protein InsA/universal stress protein C | |||||