Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,304,5750GA65.9% 31.0 / 32.5 45intergenic (+182/+533)eco/mqoserine protease inhibitor ecotin/malate:quinone oxidoreductase
Reads supporting (aligned to +/- strand):  ref base G (3/12);  new base A (15/14);  total (18/27)
Fisher's exact test for biased strand distribution p-value = 5.68e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

GCGTTACAACAGCAAGCTGCCGATCGTGGTGTATACGCCAGACAATGTAGATGTGAAGTACCGCGTCTGGAAGGCGGAAGAGAAAATTGACAACGCGGTAGTTCGCTAAACTGCCGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCT‑GGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCATCCGACATCTAACGCCCAAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCC  >  NC_000913/2304285‑2304867
                                                                                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                                                                                     
gcGTTACAACAGCAAGCTGCCGATCGTGGTGTATACGCCAGACAATGTAGATGTGAAGTACCGCGTCTGGAAGGCGGAAGAGAAAATTGACAACGCGGTAGTTCGCTAAACTGCCGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCATCCGACATCTAACGCCCAAGCCGGtt                                                                                                                                                                                                                                                                                               >  1:777705/1‑299 (MQ=255)
        acaGCAAGCTGCCGATCGTGGTGTATACGCCAGACAATGTAGATGTGAAGTACCGCGTCTGGAAGGCGGAAGAGAAAATTGACAACGCGGTAGTTCGCTAAACTGCCGTGAAGTGAGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGTGACGCTGGCGCGTCTTATCAGACCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTCACGCCGCCTCCGACATCTAACTCCCAAGCCGGTTGTCTGaagt                                                                                                                                                                                                                                                                                      >  2:623801/1‑297 (MQ=18)
          aGCAAGCTGCCGATCGTGGTGTATACGCCAGACAATGTAGATGTGAAGTACCGCGTCTGGAAGGCGGAAGAGAAAATTGACAACGCGGTAGTTCGCTAAACTGCCGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCATCCGACATCTAACGCCCAAGCCGGTTGCCTGATGCGa                                                                                                                                                                                                                                                                                    <  1:276448/300‑1 (MQ=255)
           gCAAGCTGCCGATCGTGGTGTATACGCCAGACAATGTAGATTTGAAGTACCGCGTCTGGAAGGCGGAAGAGAAAATTGACAACGCGGTAGTTCGCTAAACTGCCGTGAAGTGCGGCACCCCTTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCATCCGACATCTAACGCCCAAGCCGGTTGCCTGATGCGa                                                                                                                                                                                                                                                                                    <  1:276007/299‑1 (MQ=18)
                         gtggtgTATACGCCAGACAATGTAGATGTGAAGTACCGCGTCTGGAAGGCGGAAGAGAAAATTGACAACGCGGTAGTTCGCTAAACTGCCGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGNAGGTCGGATAAGGCGGTTACGCCGCATCCGACATCTAACGCCCAAGCCGGTTGCCTGATGCGACGCT‑GGCGCGTCTTa                                                                                                                                                                                                                                                                    >  1:215570/1‑300 (MQ=255)
                         gtggtgTATACGCCAGACAATGTAGATGTGAAGTACCGCGTCTGGAAGGCGGAAGAGAAAATTGACAACGCGGTAGTTCGCTAAACTGCCGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCACGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCATCCGACATCTAACGCACAAGCCGGTTGCCTGATGCGACGCT‑GGCGCGTCTTa                                                                                                                                                                                                                                                                    >  2:172799/1‑300 (MQ=17)
                         gtggtgTATACGCCAGACAATGTAGATGTGAAGTACCGCGTCTGGAAGGCGGAAGAGAAAATTGACAACGCGGTAGTTCGCTAAACTGCCGTGAAGTGCGGCACCCAGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCATCCGAAATCTAACGCCCAAGCCGGTTGCCTGATGCGACGCT‑GGCGCGTCtt                                                                                                                                                                                                                                                                     >  2:170745/1‑299 (MQ=17)
                            gtgtATACGCCAGACAATGTAGATGTGAAGTACCGCGTCTGGAAGGCTGAAGAGATAATTGACAACGCGGTAGTTCGCTAAACTGCCGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCATCCGACATCTAACGCCCAAGCCGGTTGCCTGATGCGACGCT‑GGCGCGTCTTATCa                                                                                                                                                                                                                                                                 >  1:245216/1‑300 (MQ=17)
                              gtATACGCCAGACAATGTAGATGTGAAGTACCGCGTCTGGAAGGCGGAAGAGAAAATTGACAACGCGGTAGTTCGCTAAACTGCCGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGANATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGATGTGAAGTGCTCAACCCAGTAGGTCGGATAAGGCGGTTACGCCGCATCCGACATCTAACGCCCAAGCCGGTTGCCTGATGCGACGCT‑GGCGCGTCTTATc                                                                                                                                                                                                                                                                  >  2:691906/1‑297 (MQ=17)
                              gtATACGCCAGACAATGTAGATGTGAAGTACCGCGTCTGGAAGGCGGAAGAGAAAATTGACAACGCGGTAGTTCGCTAAACTGCCGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCATCCGACATCTAACGCCCAAGCCGGTTGCCTGATGCGACGCT‑GGCGCGTCTTATCa                                                                                                                                                                                                                                                                 >  1:791181/1‑298 (MQ=255)
                              gtATACGCCAGACAATGTAGATGTGAAGTACCGCGTCTGGAAGGCGGAAGAGAAAATTGACAACGCGGTAGTTCGCTAAACTGCAGTGAAGTGCGGCACCCCNTAGGTCAGACAAGGCGGTCACGCCGCATCCGANATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTAAACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCATCCGAAATCTAACGCACAAGCCGGTTGCCTGATGCGACGCT‑GGCGCGTATTa                                                                                                                                                                                                                                                                    >  2:735927/1‑295 (MQ=17)
                               tataCGCCAGACAATGTAGATGTGAAGTACCGCGTCCGGAAGGCGGAAGAGAAAATTGACAACGCGGTAGTTCGCTAAACTGCCGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCATCCGACATCTAACGCCCAAGCCGGTTGCCTGATGCGACGCT‑GGCGCGTCTTATCAGGc                                                                                                                                                                                                                                                              <  1:328237/300‑1 (MQ=17)
                               tataCGCCAGACAATGTAGATGTGAAGTACCGCGTCCGGAAGGCAGAAGAGAAAATTGACAACGCGGTAGTTCGCTAAACTGCCGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCATCCGACATCTAACGCCCAAGCCGGTTGCCTGATGCGACGCT‑GGCGCGTCTTATCAGGc                                                                                                                                                                                                                                                              <  1:328299/300‑1 (MQ=17)
                                   cGCCAGACAATGTAGATGTGAAGTACCGCGTCTGGAAGGCGGAAGAGAAAATTGACAACGCGGTAGTTCGCTAAACTGCCGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATNAGGCGGTTACGCCGCATCCGACATCTAACGCCCAAGCCGGTTGCCTGATGCGACGCT‑GGCGCGTCTTATCAGGCCTac                                                                                                                                                                                                                                                          >  1:199187/1‑300 (MQ=255)
                                       ataCAATGTAGATTTTAAGTACCTCGTCTGGAATGCGGAAGAGAAAATGGACAACGCGGTAGTTCGCTAAACTGCCGTGAAGTGCGGCATCCTGTAGTTCAGACAAGGCGGTCATGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCGTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTTGGATGAGGCGGTTACGCCGCATCCGACAGCTAACGCCCAAGCCGGTTGCCTGATGCGACGCT‑GGCGCGTCTGATCAGGCCTacac                                                                                                                                                                                                                                                        <  2:132983/296‑1 (MQ=14)
                                       aaacgatttaaatggtaaGTAACGCGTCTGGAAGGCGGAAGAGAAAATTGACAACGCGGTAGTTCGCTAAACTGCCGTTAAGTTCGGCACCCCCTAGTTCAGACAAGGCAGTCACGCCACATCCGACATCCAACTCCCGATCCGGTTGCATGATGCGACGCTGGCGCGTCTTATCAGGTCTACACCGCTGTGAAGTGCTCCACCCCGGAGGGCGGATAAGGCGGTGACGCCGCATCCGACATCTAACGCCCAAGCCGGTTGCCTGATGCGACGCT‑GGCGCGTCGTATCAGGCCTacac                                                                                                                                                                                                                                                        <  2:519354/282‑1 (MQ=14)
                                       aGACAATGTAGATGTGAAGTACCGCGTCTGGAAGGCGGAAGAGAAAATTGACAACGCGGTAGTTCGCTAAACTGCCNTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCATCCGACATCTAACGCCCAAGCCGGTTGCCTGATGCGACGCT‑GGCGCGTCTTATCAGGCCTacac                                                                                                                                                                                                                                                        <  1:709945/298‑1 (MQ=255)
                                       aGACAATGTAGATGTGAAGTACCGCGTCTGGAAGGCGGAAGAGAAAATTGACAACGCGGTAGTTCGCTAAACTGCCGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCATCCGACATCTAACGCCCAAGCCGGTTGCCTGATGCGACGCT‑GGCGCGTCTTATCAGGCCTacac                                                                                                                                                                                                                                                        <  1:136924/298‑1 (MQ=255)
                                       aGACAATGTAGATGTGAAGTACCGCGTCTGGAAGGCGGAAGAGAAAATTGACAACGCGGTAGTTCGCTAAACTGCCGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCATCCGACATCTAACGCCCAAGCCGGTTGCCTGATGCGACGCT‑GGCGCGTCTTATCAGGCCTACAcc                                                                                                                                                                                                                                                       <  1:665976/299‑1 (MQ=255)
                                       aGACAAGGGAGATGTGAAGTACCGCGTCTGTAAGGCGGGAGAGAAAATTGACAGCGCGGTAGTTCGCTAAACTGCCGTGAAGTGCGACACCCCGTAGGTCAGACAAGGCGGTCACGCCACATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCATCCGACATCTAACGCCCAAGCCGGTTGCCTGATGCGACGCT‑GGCGCGTCTTATCAGGCCTacac                                                                                                                                                                                                                                                        <  2:145803/298‑1 (MQ=14)
                                            aTGTAGATGTGAAGTACCGCGTCTGGAAGGCGGAAGAGAAAATTGACAACGCGGTAGTTCGCTAAACTGCCGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCATCCGACATCTAACGCCCAAGCCGGTTGCCTGATGCGACGCT‑GGCGCGTCTTATCAgaatcataccgctct                                                                                                                                                                                                                                                  >  2:397376/1‑285 (MQ=14)
                                            aTGTAGATGTGAAGTACCGCGTCTGGAAGGCGGAAGAGAAAATTGACAACGCGGTAGTTCGCTAAACTGCCGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCATCCGACATCTAACGCCCAAGCCGGTTGCCTGATGCGACGCT‑GGCGCGTCTTATCAGGCCTACACCg                                                                                                                                                                                                                                                      >  1:138897/1‑295 (MQ=255)
                                               tAGATGTGAAGTACCGCGTCTGGAAGGCGGAAGAGAAAATTGACAACGCGGTAGTTCGCTAAACTGCCGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCATCCGACATCTAACGCCCAAGCCGGTTGCCTGATGCGACGCT‑GGCGCGTCTTATCAGGCCTACACCGCTGTGAAg                                                                                                                                                                                                                                              <  2:687412/300‑1 (MQ=255)
                                                aaattggAAGTACCGCGGCGGGAGGGTGGCCGAGAAAATGGACAGCGCGGTGGTTCGCTAAACTGCCGTGAAGGCCGGAACCCCTTAGGTTAGATAAGGCGGTCATGCAGCATCCGACATCCAGCTCCCGAGCTGGTGGCCGGAGGCGAAGTTGGCGCGCCTGGGCAGGCCTACACCGCTGTGAAGTCCTTCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCATCCGACATCTAACGCCCAAGCCGGTTGCCTGATGCGACGCCCGTCGCGTCTTATCAGGCCTACACCGCTGTGAAg                                                                                                                                                                                                                                              <  2:328290/294‑1 (MQ=2)
                                                 gATGTGAAGTACCGCGTCTGGAAGGCGGAAGAGAAAATTGACAACGCGGTAGTTCGCTAAACTGCCGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGTGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCAGTAGGTCGGATAAGGCGGTTACGCCGCATCCGACATCTAACGCCCAAGCCGGTTGCATGATGCGAAGCT‑GGAGCGTCTTATCAGGCCTACACCGCTGTGAAGt                                                                                                                                                                                                                                             >  2:75926/1‑299 (MQ=14)
                                                 gATGTGAAGTACCGCGTCTGGAAGGCGGAAGAGAAAATTGACAACGCGGTAGTTCGCTAAACTGCCGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGACCTACACCGCTGTGGAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCATCCGAAATCTAACGCCCAAGCCGGTTGCCTGATGCGACGCT‑GGCGCGTCTTATCAGGCCTAAACCGCTGTGAAGt                                                                                                                                                                                                                                             >  1:167709/1‑299 (MQ=14)
                                                               cgTCTGGAAGGCGGAAGAGAAAATTGACAACGCGGTAGTTCGCTAAACTGCCGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCATCCGACATCTAACGCCCAAGCCGGTTGCCTGATGCGACGCT‑GGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTa                                                                                                                                                                                                                                >  1:735480/1‑298 (MQ=255)
                                                                              aggggaaaTTGACAACGCGGTAGTTCGCTAAACTGCCGTGAAGTGCGGCACCCCCTAGGTCAGACAAGGCAGTCACGCCACATCCGACATCCAACACCCTAGCCAATTGCCTGATGCGACGCTGGCGCTTCTTACCAGGCCTACACCGCTGGGAAGTGCTCCACTCCCTAGGTCGGAGGAGGCGGTTACGCCGCATCCGACATCTAACGCCCAAGCCGGTTGCCTGATGCGACGCT‑GGCGCGTCTTATCAGGACTACACCGCTGTGa                                                                                                                                                                                                                                                <  2:97151/262‑1 (MQ=11)
                                                                                   aaaTTGACAACGCGGTAGTTCGCTAAACTGCCGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCATCCGACATCTAACGCCCAAGCCGGTTGCCTGATGCGACGCT‑GGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTTGGATAAGGCGGTTAcgcc                                                                                                                                                                                                          <  1:807732/300‑1 (MQ=255)
                                                                                                                                                                                                          acaacgcggtggttcgctaaactgccgtgAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCTAGCCGGTTGCCTGATGCGACGCT‑GGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCATCCGACATCTAACGCCCAAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTTGGATAAGGCGGTTACGCCACATcc                                                                                   <  1:782461/274‑1 (MQ=11)
                                                                                                                                                                                                                       tcgctaaactgccgtgAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCT‑GGCGCGTCTTATCAGGCCTACACCGCTTTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCATCCGACATCTAACGCCCAAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCGACATCCAACGTc                                                                      <  1:170745/287‑1 (MQ=255)
                                                                                                                                                                                                                       tcgctaaactgccgtgAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCT‑GGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCATCCGACATCTAACGCCCAAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCGACATCCAACGTc                                                                      <  1:172799/287‑1 (MQ=255)
                                                                                                                                                                                                                               ctgccgtgAAGTGCTGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCT‑GGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCATCCGACATCTAACGCCCAAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCGACATCCAACGTCCGAGcc                                                                >  1:927824/6‑298 (MQ=255)
                                                                                                                                                                                                                                                     gTAGTTCAGATAAGGCGGTCATGCTACATCCGTTATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCT‑GGCGCGTCTTATCAGGCCTACACCGCTGTTAAGTGCTCCACCCCGTAGGTCGGATAATGCGGTTACGCCGCATCCGACATCTAACGTCCAAGCCGGTTGCCTGATGCGACACTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTTCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGgcg                                         <  2:673626/299‑1 (MQ=11)
                                                                                                                                                                                                                                                                       tCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCT‑GGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCATCCGACATCTAACACCCAAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTacac                      <  1:234421/300‑1 (MQ=255)
                                                                                                                                                                                                                                                                       tCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCT‑GGCGCGTCTGATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCATCCGACATCTAACGCCCAAGCCGGTTGCCTGATGCGACGCTNGCGCGTCTTATCAGGCCTACACCGCTGTGAAGNGCTCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTacac                      <  2:735480/300‑1 (MQ=255)
                                                                                                                                                                                                                                                                         aCGCCGCATCCGACATCCAATTCCCGAGCCGGTTGCCTGATGCTACGCT‑GGTGCGTCTTATCGGGCCTACGCCGCTGTGAAGTGCTCCACCCCGTAATTCGGATAAGGCGGTTACGCCGCATCCGACATCTAACACCCAAGCCGTTTGCCTGATTCGACGCTGGCGCTTCTTATCATGCCTACGCCGCTGTGAAGTGCTCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCGACATCCAACTTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCGGATCAGGCCTacac                      <  2:19220/298‑1 (MQ=11)
                                                                                                                                                                                                                                                                                aTCCGACATCCAACGCCCGAGCCGGGTGCCTGATGCGACGCT‑GGCGCGTCTTAGCAGGCCTACACCGCTNTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCATCCGACATCTAACGCCCAAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGt                                                                                                            <  2:702291/205‑1 (MQ=14)
                                                                                                                                                                                                                                                                                 tCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCT‑GGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCATCCGACATCTAACGCCCAAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAg            <  1:490358/300‑1 (MQ=255)
                                                                                                                                                                                                                                                                                      cATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCT‑GGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATaa                                                                                                                                                                                                                      <  1:172882/93‑1 (MQ=34)
                                                                                                                                                                                                                                                                                      cATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCT‑GGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATaa                                                                                                                                                                                                                      >  2:172882/1‑93 (MQ=34)
                                                                                                                                                                                                                                                                                        tCCAACGCCCGAGCCGGTTGCCTGATGCGACGCT‑GGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGATCACGCCGCATCCGACATCTAACGCCCAAGCCGGTTGCCTGATGTGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCGACGTCCAAc                                                                         >  2:329163/1‑232 (MQ=255)
                                                                                                                                                                                                                                                                                           aaCGCCCGAGCCGGTTGTCTGATGCGACGCT‑GGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCTTAGTTCGGATAAGGCGGTTACGCCGCATACGACATCTAACGCCCAAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCAccc  <  1:974665/300‑1 (MQ=255)
                                                                                                                                                                                                                                                                                           aaCGCCCGAGCCGGTTGCCTGATGCGACGCT‑GGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGTTCGGATAAGGCGGTTACGCCGCATCCGACATCTAACGCCCAAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCAccc  <  1:975061/300‑1 (MQ=255)
                                                                                                                                                                                                                                                                                            aCGCCCGAGCCGATTGCCTGATGTGACGCT‑GGCGCGTCTTATCAGGCCTACACCGCTGTTAAGTGCTCCACCCCGTAGTTTGGATAGGGCGGTTACGCCGCATCCGACATCTAACGCCCAAGCCGGTTGCCTGATGCGACGCTGGCGCTTCTTATCATGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTacat                      <  2:677712/279‑2 (MQ=14)
                                                                                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                                                                                     
GCGTTACAACAGCAAGCTGCCGATCGTGGTGTATACGCCAGACAATGTAGATGTGAAGTACCGCGTCTGGAAGGCGGAAGAGAAAATTGACAACGCGGTAGTTCGCTAAACTGCCGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCT‑GGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCATCCGACATCTAACGCCCAAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCC  >  NC_000913/2304285‑2304867

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑