Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_012971	550,663	G→A	pseudogene (114/364 nt)	ECD_RS02680 →	prophage tail fiber N‑terminal domain‑containing protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_012971	550,663	0	G	A	100.0%	218.1 / NA	66	pseudogene (114/364 nt)	ECD_RS02680	prophage tail fiber N‑terminal domain‑containing protein
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (46/20);  total (46/20)

TACGGGCGCCAGAAATGGCGCCTTTTTTATTTGTGGAGTGAATATG‑‑‑GCAGTACAGATTTCAGGTGTGCTGAAAGATGGTGCGGGAAAACCAATACAGAACTGCACTATTCAACTGAAGGCAAAGCGTAACAGCACCACGGTACTGGTGAACACGGTGGCCTCTGAAAATCCGGATGAAGCCGGGCGTTACAGCATGGATGTTGAGCATGGCCAGTACAGCGTCACCCTGCTGGTTGAAGGTTTTCCGCCTTCACATGCCGGAACCATTACCGTCTATGAAGGTTCCAGACCAGGTACGCTGAATGATTTTCTCGGTGCCATGACGGAAGATGATGTCATGCCGGAGGCATTGCGTCGTTTTGAGGCAATGGTGGAAGAAGCGGCACGCAACGCCGAAGCCGCCTCTCAGAGCGCAGCGGCGGCAAAGAAATCCGAAACTGCAGC  >  NC_012971/550507‑550950                                                                                                                                                                |                                                                                                                                                                                                                                                                                                atgacagcccgccggttcaggcgggcttttttGTGGAGTGGATATGGCAGCAGTAAAAATCTCAGGTGTGCTGAAAGATGGTGCGGGAAAACCAATACAGAACTGCACTATTCAACTGAAGGCAAAGCGTAACAGCACCACGGTACTGGTGAACACGGTAGCCTCTGAAAATCCGGATGAAGCCGGGCGTTACAGCATGGATGTCGAGTATGGCCAGTACAGCGTCACCCTGCTGGTTGAAGGTTTTCCGCCTTCACATGCCGGAACCATTACCGTCTATGAAGGTTCCAGACCTGGTAc                                                                                                                                                     <  1:768578/271‑1 (MQ=25)        cccgccggttcaggcgggcttttttGTGGAGTGGATATGGCAGCAGTAAAAATCTCAGGTGTGCTGAAAGATGGTGCGGGAAAACCAATACAGAACTGCACTATTCAACTGAAGGCAAAGCGTAACAGCACCACGGTACTGGTGAACACGGTAGCCTCTGAAAATCCGGATGAAGCCGGGCGTTACAGCATGGATGTCGAGTATGGCCAGTACAGCGTCACCCTGCTGGTTGAAGGTTTTCCGCCTTCACATGCCGGAACCATTACCGTCTATGAAGGTTCCAGACCTGGTACGc                                                                                                                                                   <  1:609414/273‑1 (MQ=25)        cccgccggttcaggcgggcttttttGTGGAGTGGATATGGCAGCAGTAAAAATCTCAGGTGTGCTGAAAGATGGTGCGGGAAAACCAATACAGAACTGCACTATTCAACTGAAGGCAAAGCGTAACAGCACCACGGTACTGGTGAACACGGTAGCCTCTGAAAATCCGGATGAAGCCGGGCGTTACAGCATGGATGTCGAGTATGGCCAGTACAGCGTCACCCTGCTGGTTGAAGGTTTTCCGCCTTCACATGCCGGAACCACTACCGTCTATGAAGGTTCCAGACCTGGTACGc                                                                                                                                                   <  1:203931/273‑1 (MQ=25)        cccgccggttcaggcgggcttttttGTGGAGTGGATATGGCAGCAGTAAAAATCTCAGGTGTGCTGAAAGATGGTGCGGGAAAACCAATACAGAACTGCACTATTCAACTGAAGGCAAAGCGTAACAGCACCACGGTACTGGTGAACACGGTAGCCTCTGAAAATCCGGATGAAGCCGGGCGTTACAGCATGGATGTCGAGTATGGCAAGTACAGCGTCACCCTGCTGGTTGAAGGTTTTCCGCCTTCACATGCCGGAACCATTACCGTCTATGAAGGTTCCAGACCTGGTACGc                                                                                                                                                   <  1:77083/273‑1 (MQ=25)                                        ggatatggcagcagtaaaaatctCAGGTGTGCTGAAAGATGGTGCGGGAAAACCAATACAGAGCTGCACTATTCAACTGAAGGCAAAGCGTAACAGCACCACGGTACTGGTGAACACGGTAGCCTCTGAAAATCCGGATGAAGCCGGGCGTTACAGCATGGATGTCGAGTATGGCCAGTACAGCGTCACCCTGCTGGTTGAAGGTTTTCCGCCTTCACATGCCGGAACCATTACCGTCTATGAAGGTTCCAGACCTGGTACGCTGAATGATTTTCTAGGTGCCATGAAGGaa                                                                                                                      >  2:71287/23‑292 (MQ=37)                                        ggatatggcagcagtaaaaatctCAGGTGTGCTGAAAGATGGTGCGGGAAAACCAATACAGAACTGCACTATTCAACTGAAGGCAAAGCGTAACAGCACCACGGTACTGGTGAACACGGTAGCCTCTGAAAATCCGGATGAAGCCGGGCGTTACAGCATGGATGTCNAGTATGGCCAGTACAGCGTCACCCTGCTGGTTGAAGGTTTTCCGCCTTCACATGCCGGAACCATTACCGTCTATGAAGGTTCCAGACCTGGTACGCTGAATGATTTTCTCGGTGCCATGCCGGAAGATGATGt                                                                                                              >  2:254064/23‑300 (MQ=37)                                        ggatatggcagcagtaaaaatctCAGGTGTGCTGAAAGATGGTGCGGGAAAACCAATACAGAACTGCACTATTCAACTGAAGGCAAAGCGTAACAGCACCACGGTACTGGTGAACACGGTAGCCTCTGAAAATCCGGATGAAGCCGGGCGTTACAGCATGGATGTCGAGTATGGCCAGTACAGCGTCACCCTGCTGGTTGAAGGTTTTCCGCCTTCACATGCCGGAACCATTACCGTCTATGAAGGTTCCAGACCTGGTACGCTGAATGATTTTCTCGGTGCCATGACGGAAGATGATGt                                                                                                              >  1:193918/23‑300 (MQ=37)                                        gaatatggcagcagtaaaaatctCAGGTGTGCTGAAAGATGGTGCGGGAAAACCAATACAGAACTGCACTATTCAACTGAAGGCAAAGCGTAACAGCACCACGGTACTGGTGAACACGGTAGCCTCTGAAAATCCNGATGAAGCAGGGCGTTACAGCATGGATGTCGAGTATGGCCAGTACAGCGTCACCCTGCTGGTTGAAGGTTTTCCGCCTTCACATGCCGGAACCATTACCGTCTATGAAGGTTCCAGACCTGGTACGCTGAATGATTTTCTAGGTGCCATGACGGAAGATGATGt                                                                                                              >  2:586926/23‑300 (MQ=255)                                        gaatatggcagcagtaaaaatctCAGGTGTGCTGAAAGATGGTGCGGGAAAACCAATACAGAACTGCACTATTCAACTGAAGGCAAAGCGTAACAGCACCACGGTACTGGTGAACACGGTAGCCTCTGAAAATCCGGATGAAGCCGGGCGTTACAGCATGGATGTCGAGTATGGCCAGTACAGCGTCACCCTGCTGGTTGAAGGTTTTCCGCCTTCACATGCCGGAACTATTACCGTCTATGAAGGTTCCAGACCTGGTACGCTGAATGATTTTCTCGGTGCCATGACGGAAGATGATGt                                                                                                              <  2:732903/278‑1 (MQ=37)                                          atatggcagcagtaaaaatctCAGGTGTGCTGAAAGATGGTGCGGGAAAACCAATACAGAACTGCACTATTCAACTGAAGGCAAAGCGTAACAGCACCACGGTACTGGTGAACACGGTAGCCTCTGAAAATCCGGATGAAGCCGGGCGTTACAGCATGGATGTCGAGTATGGCCAGTACAGCGTCACCCTGCTGGTTGAAGGTTTTCCGCCTTCACATGCCGGAACTATTACCGTCTATGAAGGTTCCAGACCTGGTACGCTGAATGATTTTCTCGGTGCCATGACGGAAGATGATGt                                                                                                              <  2:755783/278‑1 (MQ=37)                                                    aggaaaaatctCAGGTGTGTTTAAAGATGGTGCTGGAAAAACAATACGGAACTGCACTATTCAACTGAAGGCAAAGCGTAACAACACCACGGTACTGGTGAACACGGTAGCCTCTGAAAATCCGGAGGAAGCCGGGCGTTACAGCATGGATGTCGATTATGGCCAGTACAGCGTCACCCTGCTGGTTGAAGGTTTTCCGCCGTCACATGCCGGAACCATTACCTTCTATGAAGGTTCCAGACCTGGTACGCTGAATGATTTTCTCGGTGCCATGACGGAAGATGATGTCATGCCGGAGGc                                                                                                  <  2:112426/290‑1 (MQ=255)                                                     gtaaaaatctCAGGTGTGCTGAAAGATGGTGCGGGAAAACCAATACAGAACTGCACTATTCAACTGAAGGCAAAGCGTAACAGCACCACGGTACTGGTGAACACGGTAGCCTCTGAAAATCCGGATGAAGCCGGGCGTTACAGCATGGATGTCGAGTATGGCCAGTACAGCGTCAACCTGCTGGTTGAAGGTTTTCCGCCTTAACATGCCGGAACCATTACCGTCTATGAAGGTTCCAGACCTGGTACGCTGAATGATTTTCTAGGTGCCATGACGGAAGATGATGTCATGCAGGAGGCa                                                                                                 >  2:446561/10‑300 (MQ=37)                                                          aatctCAGGTGTGCTGAAAGATGGTGCGGGAAAACCAATGCAGAACTGCACTATTCAACTGAAGGCAAAGCGTAACAGCACCACGGTACTGGTGAACACGGTAGCCTCTGAAAATCCGGATGAAGCCGGGCGTTACAGCATGGATGTCGAGTATGGCCAGTACAGCGTCACCCTGCTGGTTGAAGGTTTTCCGCCTTCACATGCCGGAACCATTACCGTCTATGAAGGTTCCAGACCTGGTACGCTGAATGATTTTCTCGGTGCCATGACGGAAGATGATGTCATGCCGGAGGCATTGc                                                                                             >  1:451228/5‑299 (MQ=255)                                                          aatctCAGGTGTGCTGAAAGATGGTGCGGGAAAACCAATACAGAACTGCACTATTCAACTGAAGGCAAAGCGTAACAGCACCACGGTACTGGTGAACACGGTAGCCTCTGAAAATCCGGATGAAGCCGGGCGTTACAGCATGGATGTCGAGTATGGCCAGTACAGCGTCACCCTGCTGGTTGAAGGTTTTCCGCCTTCACATGCCGGAACCATTACCGTCTATGAAGGTTCCAGACCTGGTACGCTGAATGATTTTCTCGGTGCCATGACGGAAGATGATGTCATGCCGGAGGCATTGc                                                                                             >  1:451220/5‑299 (MQ=255)                                                            tctCAGGTGTGCTGAAAGATGGTGCGGGAAAACCAATACAGAACTGCACTATTCAACTGAAGGCAAAGCGTAACAGCACCACGGTACTGGTGAACACGGTAGCCTCTGACAATCCGGATGAAGCCGGGCGTTACAGCATGGATGTCGAGTATGGCCAGTACAGCGTCACCCTGCTGGTTGAAGGTTTTCCGCCTTCACATGCCGGAACCATTACCGTCTATGAAGGTTCCAGACCTGGTACGCTGAATGATTTTCTCGGTGCCATGACGGAAGATGATGTCATGCCGGAGGCATTGcgtc                                                                                          >  1:432627/3‑300 (MQ=255)                                                            tctCAGGTGTGCTGAAAGATGGTGCGGGAAAACCAATACAGAACTGCACTATTCAACTGAAGGCAAAGCGTAACAGCACCACGGTACTGGTGAACACGGTAGCCTCTGAAAATCCGGATGAAGCCGGGCGTTACAGCATGGATGTCGAGTATGGCCAGTACAGCGTCACCCTGCTGGTTGAAGGTTTTCCGCCTTCACATGCCGGAACCATTACCGTCTATGAAGGTTCCAGACCTGGTACGCTGAATGATTTTCTAGGTGCCATGACGGAAGATGATGTCATGCCGGAGGCATTGcgtc                                                                                          >  1:393875/3‑300 (MQ=255)                                                                    gtgCTGAAAGATGGTGCGGGAAAACCAATACAGAACTGCACTATTCAACTGAAGGCAAAGCGTAACAGCACCACGGTACTGGTGAACACGGTAGCCTCTGAAAATCCGGATGAAGCCGGGCGTTACAGCATGGATGTCGAGTATGGCCAGTACAGCGTCACCCTGCTGGTTGAAGGTTTTCCGCCTTCACATGCCGGAACCATTACCGTCTATGAAGGTTCCAGACCTGGTACGCTGAATGATTTTCTCGGTGCCATGACGGCAGATGATGTCATGCCGGAGGCATTGCGTCGTTTTGa                                                                                   >  2:46860/1‑299 (MQ=255)                                                                      gCTGAAAGATGGTGCGGGAAAACCAATACAGAACTGCACTATTCAACTGAAGGCAAAGCGTAACAGCACCACGGTACTGGTGAACACGGTAGCCTCTGAAAATCCGGATGAAGCCGGGCGTTACAGCATGGATGTCGAGTATGGCCAGTACAGCGTCACCCTGCTGGTTGCCGGTTTTCCGCCTTCACATGCCGGAACCATTACCGTCTATGAAGGTTCCAGACCTGGTACGCTGAATGATTTTCTAGGTGCCATGACGGAAGATGATGTCATGCCGGAGGCATTGCGTCGTTTTGAGGc                                                                                >  1:278721/1‑300 (MQ=255)                                                                      gCTGAAAGATGGTGCGGGAAAACCAATACAGAACTGCACTATTCAACTGAAGGCAAAGCGTAACAGCACCACGGTACTGGTGAACACGGTAGCCTCTGAAAATCCGGATGAAGCCGGGCGTTACAGCATGGATGTCGAGTATGGCCAGTACAGCGTCACCCTGCTGGTTGAAGGTTTTCCGCCTTCACATGCCGGAACCATTACCGTCTATGAAGGTTCCAGACCTGGTACGCTGAATGATTTTCTCGGTGCCATGACGGAAGATGATGTCATGCCGGAGGCATTGCGTCGTTTTGAGGc                                                                                <  1:593905/300‑1 (MQ=255)                                                                      gCTGAAAGATGGTGCGGGAAAACCAATACAGAACTGCACTATTCAACTGAAGGCAAAGCGTAACAGCACCACGGTACTGGTGAACACGGTAGCCTCTGAAAATCCGGATGAAGCCGGGCGTTACAGCATGGATGTCGAGTATGGCCAGTACAGCGTCACCCTGCTGGTTGAAGGTTTTCCGCCTTCACATGCCGGAACCATTACCGTCTATGAAGGTTCCAGACCTGGTACGCTGAATGATTTTCTAGGTGCCATGACGGAAGATGATGTCATGCCGGAGGCATTGCGTCGTTTTGAGGc                                                                                >  1:279421/1‑300 (MQ=255)                                                                      gCTGAAAGATGGTGCGGGAAAACCAATACAGAACTGCACTATTCAACTGAAGGCAAAGCGTAACAGCACCACGGTACTGGTGAACACGGTAGCCTCTGAAAATCAGGATGAAGCCGGGCGTTACAGCATGGATGTCGAGTATGGCCAGTACAGCGTCACCCTGCTGGTTGAAGGTTTTCCGCCTTCACATGCCGGAACCATTACCGTCTATGAAGGTTCCAGACCTGGTACGCTGAATGATTTTCTCGGTGCCATGACGGAAGATGATGTCATGCCGGAGGCATTGCGTCGTTTTGAGGc                                                                                <  1:79912/300‑1 (MQ=255)                                                                      gCTGAAAGATGGTGCGGGAAAACCAATACAGAACTGCACTATTCAACTGAAGGCAAAGCGTAACAGCACCACGGTACTGGTGAACACGGTAGCCTCTGAAAATCAGGATGAAGCCGGGCGTTAAAGCATGGATGTCGAGTATGGCCAGTACAGCGTCACCCTGCTGGTTGAAGGTTTTCCGCCTTCACATGCCGGAACCATTACCGTCTATGAAGGTTCCAGACCTGGTACGCTGAATGATTTTCTCGGTGCCATGACGGAAGATGATGTCATGCCGGAGGCATTGCGTCGTTTTGAGGc                                                                                <  1:79721/300‑1 (MQ=255)                                                                       cTGAAAGATGGTGCGGGAAAACCAATACAGAACTGCACTATTCAACTGAAGGCAAAGCGTAACAGCACCACGGTACTGGTGAACACGGTAGCCTCTGAAAATCCGGATGAAGCCGGGCGTTACAGCATGGATGTCGAGTATGGCCAGTACAGCGTCACCCTGCTGGTTGAAGGTTTTCCGCCTTCACATGCCGGAACCATTACCGTCTATGAAGGTTCCAGACCTGGTACGCTGAATGATTTTCTCGGTGCCATGACGGAAGATGATGTCATGCCGGAGGCATTGCGTCGTTTTGAGGCa                                                                               >  2:134601/1‑300 (MQ=255)                                                                        tGAAAGATGGTGCGGGAAAACCAATACAGAACTGCACTATTCAACGGAAGGCAAAGCGTAACAGCACCACGGTACTGGTGAACACGGNAGCCTCTGAAAATCCGGATGAAGCCGGGCGTTACAGCATGGATGTCGAGTATGGCCAGTACAGCGTCACCCTGCTGGTTGAAGGTTTTCCGCCTTCACATGCCGGAACCATTACCGTCTATGAAGGTTCCAGACCTGGTACGCTGAATGATTTTCTCGGTGCCATGACGGAAGATGATGTCATGCCGGAGGCATTGCGTCGTTTTGAgg                                                                                 <  2:620137/297‑1 (MQ=255)                                                                                 gTGCGGGAAAACCAATACAGAACTGCACTATTCAACTGAAGGCAAAGCGTAACAGCACCACGGTACTGGTGAACACGGTAGCCTCTGAAAATCCGGATGAAGCCGGGCGTTACAGCATGGATGTCGAGTATGGCCAGTACAGCGTCACCCTGCTGGTTGAAGGTTTTCCGCCTTCACATGCCGGAACCATTACCGTCTATGAAGGTTCCNGACCTGGTACGCTGAATGATTTTCTCGGTGCCATGACGGAAGATGATGTCATGCCGGAGGCATTGCGTCGTTTTGAGGCAATGGTGgaa                                                                      >  2:614452/1‑299 (MQ=255)                                                                                 gTGCGGGAAAACCAATACAGAACTGCACTATTCAACTGAAGGCAAAGCGTAACAGCACCACGGTACTGGTGAACACGGTAGCCTCTGAAAATCCGGATGAAGCCGGGCGTTACAGCATGGATGTCGAGTATGGCCAGTACAGCGTCACCCTGCTGGTTGAAGGTTTTCCGCCTTCACATGCCGGAACCATTACCGTCTATGAAGGTTCCNGACCTGGTACGCTGAATGATTTTCTCGGTGCCATGACGGAAGATGATGTCATGACGGAGGTATTGCGTCGTTCTGAGGCAACGGTGgaa                                                                      >  2:614445/1‑299 (MQ=37)                                                                                     gggAAAACCAATACAGAACTGCACTATTCAACTGAAGGCAAAGCGTAACAGCACCACGGTACTGGTGAACACGGTAGCCTCTGAAAATCCGGATGAAGCCGGGCGTTACAGCATGGATGTCGAGTATGGCCAGTACAGCGTCACCCTGCTGGTTGAAGGTTTTCCGCCTTCACATGCCGGAACCATTACCGTCTATGAAGGTTCCAGACCTGGTACGCTGAATGATTTTCTCGGTGCCATGACGGAAGATGATGTCATGCCGGAGGCATTGCGTCGTTTTGAGGCAATGGTGGAAGAAGc                                                                 >  1:771610/1‑300 (MQ=255)                                                                                          aaCCAATACAGAACTGCACTATTCAACTTAAGGCAAAGCGTAACAGCACCACGGTACTGTTGAACACGGTAGCCTCTGAAAATCCCGATGAAGCCGGGCGTTACAGCATGGATGTCGAGTATGGCCAGTACAGCGTCACCCTGGTGTTTGAATGTTTTCCGCCTCCACATGCCGGAACCATTATCGTCTATGAAGGTTCCAGACCTGGTACGCTGAATGATTTTCTCGGTGCCATGACGGAAGATGATGTCATGCCGGAGGCATTGCGTCGTTTTGAGGCAATGGTGGAAGAAGCAGCAc                                                            <  2:539894/300‑1 (MQ=255)                                                                                            ccAATACAGAACTGCACTATTCAACTGAAGGCAAAGCGTAACAGCACCACGGTACTGGTGAACACGGTAGCCTCTGAAAATCCGGATGAAGCCGGGCGTTACAGCATGGATGTCGAGTATGGCCAGTACAGCGTCACCCTGCTGGTTGAAGGTTTTCCGCCTTCACATGCCGGAACCATTACCGTCTATGAAGGTTCCAGACCTGGTACGCTGAATGACTTTCTCGGTGCCATGACGGAAGATGATGTCATGCCGGAGGCATTGCGTCGTTTTGAGGCAATGGTGGAAGAAGCAGCACGc                                                          >  1:255044/1‑300 (MQ=255)                                                                                               aTACAGAACTGCACTATTCAACTGAAGGCAAAGCGTAACAGCACCACGGTACTGGTGAACACGGTAGCCTCTGAAAATCCGGATGAAGCCGGGCGTTACAGCATGGATGTCGAGTATGGCCAGTACAGCGTCACCCTGCTGGTTGAAGGTTTTCCGCCTTCACATGCCGGAACCATTACCGTCTATGAAGGTTCCAGACCTGGTACGCTGAATGATTTTCTNGGTGCCATGACGGAAGATGATGTCATGCCGGAGGCATTGCGTCGTTTTGAGGCAATGGTGGAAGAAGCAGCACGCAAc                                                       >  1:563246/1‑300 (MQ=255)                                                                                                    gAACTGCACTATTCAACTGAAGGCAAAGCGTAACAGCACCACGGTACTGGTGAACACGGTAGCCTCTGAAAATCCGGATGAAGCCGGGCGTTACAGCATGGATGTCGAGTATGGCCAGTACAGCGTCACCCTGCTGGTTGAAGGTTTTCCGCCTTCACATGCCGGAACCATTACCGTCTATGAAGGTTCCAGACCTGGTACGCTGAATGATTTTCTCGGTGCCATGACGGAAGATGATGTCATGCCGGAGGCATTGCGTCGTTTTGAGGCAATGGTGGAAGAAGCAGCACGCAACGctga                                                  >  2:200576/1‑297 (MQ=255)                                                                                                    gAACTGCACTATTCAACTGAAGGCAAAGCGTAACAGCACCACGGTACTGGTGAACACGGTAGCCTCTGAAAATCCGGATGAAGCCGGGCGTTACAGCATGGATGTCGAGTATGGCCAGTACAGCGTCACCCTGCTGGTTGAAGGTTTTCCGCCTTCACATGCCGGAACCATTACCGTCTATGAAGGTTCCAGACCTGGTACGCTGAATGATTTTCTCGGTGCCATGAAGGAAGATGATGTCATGCCGGAGGCATTGCGTCGTTTTGAGGCAATGGTGGAAGAAGCAGCACGCAACGctga                                                  >  1:616924/1‑297 (MQ=255)                                                                                                    gAACTGCACTATTCAACTGAAGGCAAAGCGTAACAGCACCACGGTACTGGTGAACACGGTAGCCTCTGAAAATCCGGATGAAGCCGGGCGTTACAGCATGGATGTCGAGTATGGCCAGTACAGCGTCACCCTGCTGGTTGAAGGTTTTCCGCCTTCACATGCCGGAACCATTACCGTCTATGAAGGTTCCAGACCTGGTACGCTGAATGATTTTCTAGGTGCCATGACGGAAGATGATGTCATGCCGGAGGCATTGCGTCGTTTTGAGGCAATGGTGGAAGAAGCAGCACGCAACGctga                                                  >  1:17607/1‑297 (MQ=255)                                                                                                              aTTCAACTGAAGGCAAATCGTAACAGCACCACGGTACTGGTGAACACGGTAGCCTCTGAAAATCCGGATGAAGCCGGGCGTTACAGCATGGATGTCGAGTATGGCCAGTACAGCGTCACCCTGCTGGTTGAAGGTTTTCCGCCTTCACATGCCGGAACCATTACCGTCTATGAAGGTTCCAGACCTGGTACGCTGAATGATTTTCTCGGTGCCATGACGGAAGATGATGTCATGCCGGAGGCATTGCGTCGTTTTGAGGCAATGGTGGAAGAAGCAGCACGCAACGCTGAAGCCGCctct                                        >  1:339316/1‑300 (MQ=255)                                                                                                              aTTCAACTGAAGGCAAAGCGTAACAGCACCACGGTACTGGTGAACACGGTAGCCTCTGAAGATCCGGATGAAGCCGGGCGTTACAGCATGGATGTCGAGTATNGCCAGTACAGCGTCACCCTGCTGGTTGAAGGTNTTCCGCCTTCACATGCCGGAACCATTACCGTCTATGAAGGTTCCAGACCTGGTACGCTGAATGATTTTCTCGGTGCCATGACGGAAGATGATGTCATGCCGGAGGCATTGCGTCGTTTTGAGGCAATGGTGGAAGAAGCAGCACGCAACGCTGAAGCCGCctat                                        >  2:607326/1‑298 (MQ=255)                                                                                                              aTTCAACTGAAGGCAAAGCGTAACAGCACCACGGTACTGGTGAACACGGTAGCCTCTGAAAATCCGGATGAAGCCGGGCGTTACAGCATGGATGTCGAGTATGGCCAGTACAGCGTCACCCTGCTGGTTGAAGGTTTTCCGCCTTCACATGCCGGAACCATTACCGTCTATGAAGGTTCCAGACCTGGTCCGCTGAATGATTTTCTAGGTGCCATGACGGAAGATGATGTCATGCCGGAGGCATTGCGTCGTTTTGAGGCAATGGTGGAAGAAGCAGCACGCAACGCTGAAGCCGCatct                                        >  2:54468/1‑300 (MQ=38)                                                                                                              aTTCAACTGAAGGCAAAGCGTAACAGCACCACGGTACTGGTGAACACGGTAGCCTCTGAAAATCCGGATGAAGCCGGGCGTTACAGCATGGATGTCGAGTATGGCCAGTACAGCGTCACCCTGCTGGTTGAAGGTTTTCCGCCTTCACATGCCGGAACCATTACCGTCTATGAAGGTTCCAGACCTGGTACGCTGAATGATTTTCTCGGTGCCATGACGGAAGATGATGTCATGCCGGAGGCATTGCGTCGTTTTGAGGCAATGGTGGAAGAAGCAGCACGCAACGCTGAAGCCGCctct                                        >  2:305923/1‑300 (MQ=255)                                                                                                                  aaCTGAAGGCAAAGCGTAACAGCACCACGGTACTGGTGAACACGGTAGCCTCTGAAAATCCGGATGAAGCCGGGCGTTACAGCATGGATGTCGAGTATGGCCAGTACAGCGTCACCCTGCTGGTTGAAGGTTTTCCGCCTTCACATGCCGGAACCATTACCGTCTATGAAGGTTCCAGACCTGGTACGCTGAATGATTTTCTCGGTGCCATGACGGAAGATGATGTCATGCCGGAGGCATTGCGTCGTTTTGAGGCAATGGTGGAAGAAGCAGCACGCAACGCTGAAGCCGCCTCTCag                                     <  1:633018/299‑1 (MQ=255)                                                                                                                  aaCTGAAGGCAAAGCGNAACAGCACCACGGTACTGNTGAACACGGTAGCCTCTGAAAATCCGGATGAAGCCGGGCGTTACAGCATGGATGTCGAGTATGGCCAGTACAGCGTCACCCTGCTGGTTGAAGGTTTTCCGCCTTCACATGCCGGAACCATTACCGTCTATGAAGGTTCCAGACCTGGTACGCTGAATGATTTTCTAGGTGCCATGACGGAAGATGATGTCATGCCGGAGGCATTGCGTCGTTTTGAGGCAATGGTGGAAGAAGCAGCACGCAACGNTGAAGCCGCCTCTCag                                     <  1:669284/299‑1 (MQ=38)                                                                                                                     tGAAGGCAACGCGTAACAGCACCACGGTACTGGTGAACACGGTATCCTCGGAAAATCCGGATGAAGCCGGGCGTTACAGAATGAATGTCGAGTATGGCCAGTACAGCGTCACCCTGCTGGTTGAAGATTTTCCTCCTTCACATGCCGGAACCATTACCGTCTANGAAGGTTCCAGACCTGGTACGCTGAATGATTTNCTCGGTGCCATGACGGAAGATGATGTCATGCCGGAGGCATTGCGTCGTTTTGAGGCAATGGTGGAAGAAGCAGCACGCAACGCTGAAGCCGCCTCTCAGAgc                                  <  2:606705/299‑1 (MQ=255)                                                                                                                      gAAGGCAAAGCGTAACAGCACCACGGTACTGGTGAACACGGTAGCCTCTGAAAATCCGGATGAAGCCGTGCGTTACAGCATGGATGTCGAGTATGGCCAGTACAGCGTCACCCTGCTGGTGGAAGGTTTTCCGCCTTCACATGCCGGAACCATTACCGTCTATGAAGGTTCCAGACCTGGTACGCTGAATGATTTTCTCGGTGCCATGACGGAAGATGATGTCATGCCGGAGGCATTGCGTCGTTTTGAGGCAATGGTGGAAGAAGCAGCACGCAACGCTGAAGCCGCCTCTCAGAgcgc                                <  2:493818/300‑1 (MQ=255)                                                                                                                      gAAGGCAAAGCGTAACAGCACCACGGTACTGGTGAACACGGTAGCCTCTGAAAATCCGGATGAAGCCGGGCGTTACAGCATGGATGTCGAGTATGGCCAGTACAGCGTCACCCTGCTGGTTGAGGGTTTTCCGCCTTCACATGCCGGAACCATTACCGTCTATGAAGGTTCCAGACCTGGTACGCTGAATGATTTTCTCGGTGCCATGACGGAAGATGATGTCATGCCGGAGGCATTGCGTCGTTTTGAGGCAATGGTGGAAGAAGCAGCACGCAACGCTGAAGCCGCCTCTCAGAgcgc                                <  2:493821/300‑1 (MQ=255)                                                                                                                      gAAGGCAAAGCGTAACAGCACCACGGTACTGGTGAACACGGTAGCCTCTGAAAATCCGGATGAAGCCGGGCGTTACAGCATGGATGTCGAGTATGGCCAGTACAGCGTCACCCTGCTGGTTGAAGGTTTTCCGCCTTCACATGCCGGAACCATTACCGTCTATGAAGGTTCCAGACCTGGTACGCTGAATGATTTTCTCGGTGCCATGACGGAAGATGATGTCATGCCGGAGGCATTGCGTCGTTTTGAGGCAATGGTGGAAGAAGCAGCACGCAACGCTGAAGCCGCCTCTCAGAgcgc                                <  2:494166/300‑1 (MQ=255)                                                                                                                         ggCAAAGCGTAACAGCACCACGGTACTGGTGAACACGGTAGCCTCTGAAAATCCGGATGAAGCCGGGCGTTACAGCATGGATGTCGAGTATGGCCAGTACAGCGTCACCCTGCTGGTTGAAGGTTTTCCGCCTTCACATGCCGGAACCATTACCGTCTATGAAGGTTCCAGACCTGGTACGCTGAATGATTTTCTCGGTGCCATGACGGAAGATGATGTCATGCCGTAGGCATTGCGTCGTTTTGAGGCAATGGTGGAAGAAGCAGCACGCAACGCTGAAGCCGCCTCTCAGAGCGCAgc                             <  1:779696/300‑1 (MQ=255)                                                                                                                         ggCAAAGCGTAACAGCACCACGGTACTGGTGAACACGGTAGCCTCTGAAAATCCGGATGAAGCCGGGCGTTACAGCATGGATGTCGAGTATGGCCAGTACAGCGTCACCCTGCTGGTTGAAGGTTTTCCGCCTTCACATGCCGGAACCATTACCGTCTATGAAGGTTCCAGACCTGGTACGCTGAATGATTTTCTCGGTGCCATGACGGAAGATGATGTCATGCCGGAGGCATTGCGTCGTTTTGAGGCAATGGTGGAAGAAGCAGCACGCAACGCTGAAGCCGCCTCTCAGAGCGCAgc                             <  1:779707/300‑1 (MQ=255)                                                                                                                             aaGCGTAACAGCACCACGGTACTGGTGAACACGGTAGCCTCTGAAAATCCGGATGAAGCCGGGCGTTACAGCATGGATGTCGAGTATGGCCAGTACAGCGTCACCCTGCTGGTTGAAGGTTTTCCGCCTTCACATGCCGGAACCATTACCGTCTATGAAGGTTCCAGACCTGGTACGCTGAATGATTTTCTCGGTGCCATGACGGAAGATGATGTCATGCCGGAGGCATTGCGTCGTTTTGAGGCAATGGTGGAAGAAGCAGCACGCAACGCTGAAGCCGCCTCTCAGAGCGCAgcggca                         >  1:684145/1‑299 (MQ=255)                                                                                                                               gCGTAACAGCACCACGGTACTGGTGAACACGGTAGCCTCTGAAAATCCGGATGAAGCCGGGCGTTACAGCATGGATGTCGAGTATGGCCAGTACAGCGTCACCCTGCTGGTTGAAGGTTTTCCGCCTTCACATGCCGGAACCATTACCGTCTATGAAGGTTCCAGACCTGGTACGCTGAATGATTTTCTCGGTGCCATGACGGAAGATGATGTCATGCCGGAGGCATTGCGTCGTTTTGAGGCAATGGTGGAAGAAGCAGCACGCAACGCTGAAGCAGCCTATCAGAGCGCAgc                             >  2:317022/1‑294 (MQ=38)                                                                                                                               gCGTAACAGCACCACGGTACTGGTGAACACGGTAGCCTCTGAAAATCCGGATGAAGCCGGGCGTTACAGCATGGATGTCGAGTATGGCCAGTACAGCGTCACCCTGCTGGTTGAAGGTTTTCCGCCTTCACATGCCGGAACCATTACCGTCTATGAAGGTTCCAGACCTGGTACGCTGAATGATTTTCTCGGTGCCATGAAGGAAGATGATGTCATGCCGGAGGCATTGCGTCGTTTTGAGGCAATGGTGGAAGAAGCAGCACGCAACGCTGAAGCAGCCTATCAGAGCGCAgcggcagc                       >  2:718311/1‑297 (MQ=38)                                                                                                                                     cAGCACCACGGTACTGGTGAACACGGTAGCCTCTGAAAATCCGGATGAAGCCGGGCGTTACAGCATGGATGTCGAGTATGGCCAGTACAGCGTCACCCTGCTGGTTGAAGGTTTTCCGCCTTCACATGCCGGAACCATTACCGTCTATGAAGGTTCCAGACCTGGTACGCTGAATGATTTTCTCGGTGCCATGACGGAAGATGATGTCATGCCGGAGGCATTGCGTCGTTTTGAGGCAATGGTGGAAGAAGCAGCACGCAACGCTGAAGCCGCCTCTCAGAGCGCAGCGGCAGCAAAGaa                 >  1:267999/1‑300 (MQ=255)                                                                                                                                     cAGCACCACGGTACTGGTGAACACGGTAGCCTCTGAAAATCCGGATGAAGCCGGGCGTTACAGCATGGATGTCGAGTATGGCCAGTACAGCGTCACCCTGCTGGTTGAAGGTTTTCCGCCTTCACATGCCGGAACCATTACCGTCTATGAAGGTTCCAGACCTGGTACGCTGAATGATTTTCTCGGTGCCATGACGGAAGATGATGTCATGCCGGAGGCATTGCGTCGTTTTGAGGCAATGGTGGAAGAAGCAGCACGCAACGCTGAAGCCGCCTCTCAGAGCGCAGCGGCAGCAAAGaa                 >  2:561387/1‑300 (MQ=255)                                                                                                                                     cAGCACCACGGTACTGGTGAACACGGTAGCCTCTGAAAATCCGGATGAAGCCGGGCGTTACAGCATGGATGTCGAGTATGGCCAGTACAGCGTCAACCTGCTGGTTGAAGGTTTTCCGCCTTCACATGCCGGAACCATTACCGTCTATGAAGGTTCCAGACCTGGTACGCTGAATGATTTTCTCGGTGCCATGACGGAAGATGATGTCATGCCGGAGGCATTGCGTCGTTTTGAGGCAATGGTGGAAGAAGCAGCACGCAACGCTGAAGCCGCCTATCAGAGCGCAGCGGCAGCAAAGaa                 >  2:669428/1‑300 (MQ=38)                                                                                                                                       gCACCACGGTACTGGTGAACACGGTAGCCTCTGAAAATCCGGATGAAGCCGGGCGTTACAGCATGGATGTCGAGTATGGCCAGTACAGCGTCACCCTGCTGGTTGAAGGTTTTCCGCCTTCACATGCCGGAACCATTACCGTCTATGAAGGTTCCAGACCTGGTACGCTGAATGATTTTCTCGGTGCCATGACGGAAGATGATGTCATGCCGGAGGCATTGCGTCGTTTTGAGGCAATGGTGGAAGAAGCAGCACGCAACGCTGAAGCCGCCTCTCAGAGCGCAGCGGCAGCAAAGAAAt               >  1:450001/1‑300 (MQ=255)                                                                                                                                       gCACCACGGTACTGGTGAACACGGTAGCCTCTGAAAATCCGGATGAAGCCGGGCGTTACAGCATGGATGTCGAGTATGGCCAGTACAGCGTCACCCTGCTGGTTGAAGGTTTTCCGCCTTCACATGCAGGAACCATTACCGTCTATGAAGGTTCCAGACCTGGTACNCTGAATGATTTTCTCGGTGCCATGAAGGAAGATGATGTCATGCAGGAGGCATTGCGTCGTTTTGAGGCAATGGTGGAAGAAGCAGCACGCAACGCTGAAGCCGCCTATCAGAGCGCAGTGGCAGCAAAGAAAt               >  2:250917/1‑300 (MQ=38)                                                                                                                                          ccacGGTACTGGTGAACACGGTAGCCTCTGAAAATCCGGATGAAGCCGGGCGTTACAGCATGGATGTCGAGTATGGCCAGTACAGCGTCACCCTGCTGGTTGAAGGTTTTCCGCCTTCACATGCCGGAACCATTACCGTCTATGAAGGTTCCAGACCTGGTACGCTGAATGATTTTCTCGGTGCCATGACGGAAGATGATGTCATGCCGGAGGCATTGCGTCGTTTTGAGGCAATGGTGGAAGAAGCAGCACGCAACGCTGAAGCCGCCTCTCAGAGCGCAGCGGCAGCAAAGAAATca             >  1:129310/1‑298 (MQ=255)                                                                                                                                          ccacGGTACTGGTGAACACGGTAGCCTCTGAAAATCCGGATGAAGCCGGGCGTTACAGCATGGATGTCGAGTATGGCCAGTACAGCGTCACCCTGCTGGTTGAAGGTTTTCCGCCTTCACATGCCGGAACCATTACCGTCTATGAAGGTTCCAGACCTGGTACGCTGAATGATTTTCTCGGTGCCATGACGGAAGATGATGTCATGCCGGAGGCATTGCGTCGTTTTGAGGCAATGGTGGAAGAAGCAGCACGCAACGCTGAAGCCGCCTCTAAGAGCGCAGCGGCAGCAAAGAAATca             >  2:160066/1‑298 (MQ=38)                                                                                                                                               gTACTGGTGAACACGGTAGCCTCTGAAAATCCGGATGAAGCCTGGCGTTACAGCATGGATGTCGAGTATGGCCAGTACAGCGTCACCCTGCTGGTTGAAGGTTTTCCGCCTTCACATGCCGGAACCATTACCGTCTATGAAGGTTCCAGACCTGGTACGCTGAATGATTTTCTCGGTGCCATGACGGAAGATGATGTCATGCCGGAGGCATTGCGTCGTTTTGAGGCAATGGTGGAAGAAGCAGCACGCAACGCTGAAGCCGCCTCTCAGAGCGCAGCGGCAGCAAAGAAATCAGAAAca       >  1:720753/1‑299 (MQ=255)                                                                                                                                               gTACTGGTGAACACGGTAGCCTCTGAAAATCCGGATGAAGCCGGGCGTTACAGCATGGATGTCGAGTATGGCCAGTACAGCGTCACCCTGCTGGTTGAAGGTTTTCCGCCTTCACATGCCGGAACCATTACCGTCTATGAAGGTTCCAGACCTGGTACGCTGAATGATTTTCTCGGTGCCATGACGGAAGATGATGTCATGCCGGAGGCATTGCGTCGTTTTGAGGCAATGGTGGAAGAAGCAGCACGCAACGCTGAAGCCGCCTCTCAGAGCGCAGCGGCAGCAAAGAAATCAGAAAca       >  2:477730/1‑299 (MQ=38)                                                                                                                                               gTACTGGTGAACACGGTAGCCTCTGAAAATCCGGATGAAGCCGGGCGTTACAGCATGGATGTCGAGTATGGCCAGTACAGCGTCACCCTGCTGGTTGAAGGTTTTCCGCCTTCACATGCCGGAACCATTACCGTCTATGAAGGTTCCAGACCTGGTACGCTGAATGATTTTCTCGGTGCCATGACGGAAGATGATGTCATGCAGGAGGCATTGCGTCGTTTTGAGGCAATGGTGGAAGAAGCAGCACGCAACGCTGAAGCCGCCTCTCAGAGCGCAGCGGCAGCAAAGAAATCAGAAAca       >  2:196336/1‑299 (MQ=38)                                                                                                                                               gTACTGGTGAACACGGTAGCCTCTGAAAATCCGGATGAAGCCGGGCGTTACAGCATGGATGTCGAGTATGGCCAGTACAGCGTCACCCTGCTGGTTGAAGGTTTTCCGCCTTCACATGCCGGAACCATTACCGTCTATGAAGGTTCCAGACCTGGTACGCTGAATGATTTTCTCGGTGCCATGAAGGAAGATGATGTCATGCCGGAGGCATTGCGTCGTTTTGAGGCAATGGTGGAAGAAGCAGCACGCAACGCTGAAGCCGCCTCTCAGAGCGCAGCGGCAGCAAAGAGATCAGAAAca       >  2:703213/1‑299 (MQ=38)                                                                                                                                               gTACTGGTGAACACGGTAGCCTCTGAAAATCCGGATGAAGCCGGGCGTTACAGCATGGATGTCGAGTATGGCCAGTACAGCGTCACCCTGCTGGTTGAAGGTTTTCCGCCTTCACATGCCGGAACCATTACCGTCTATGAAGGTTCCAGACCTGGTACGCTGAATGATTTTCTAGGTGCCATGACGGAAGATGATGTCATGCAGGAGGCATTGCGTCGTTTTGAGGCAATGGTGGAAGAAGCAGCACGCAAAGCTGAAGCCGCCTCTCAGAGCGCAGCGGCAGCAAAGAAATCAGAAAca       >  2:159308/1‑299 (MQ=38)                                                                                                                                               gTACTGGTGAACACGGTAGCCTCTGAAAATCCGGATGAAGCCGGGCGTTACAGCATGGATGTCGAGTATGGCCAGTACAGCGTCACCCTGCTGGTTGAAGGTTTTCCGCCTTCACATGCCGGAACCATTACCGTCTATGAAGGTTCCAGACCTGGTACGCTGAATGATTTTCTAGGTGCCATGAAGGAAGATGATGTCATGCCGGAGGCATTGCGTCGTTTTGAGGCAATGGTGGAAGAAGCAGCACGCAACGCTGAAGCCGCCTCTCAGCGCGCAGCGGCAGCAGAGAAATCAGAAAca       >  2:193370/1‑299 (MQ=38)                                                                                                                                                  cTGGTGAACACGGTAGCCTCTGAAAATCCGGATGAAGCAGGGCGTTACAGCATGGATGTCGAGTATGGCCAGTACAGCGTCACCCTGCTGGTTGAAGGTTTTCCGCCTTCACATGCCGGAACCATTACCGTCTATGAAGGTTCCCGACCTGGTACGCTGAATGATTTTCTCGGTGCCATGAAGGAAGATGATGTAATGAAGGAGGCATTGCGTCGTTTTGAGGAAATGGTGGCAGAAGCAGCACGCAACGCTGCAGCCGCATCTAAGAGCGCAgcagcagcagaaaaatcaaaaaaaaca    >  2:185059/1‑275 (MQ=255)                                                                                                                                                    ggttaaCACGGTAGCCTCTGAAAATCCGGATGAAGCCGGGCGTTACAGCATGGATGTCGAGTATGGCCAGTACAGCGTCACCCTGCTGGTTGAAGGTTTTCCGCCTTCACATGCCGGAACCATTACCGTCTATGAAGGTTCCAGACCTGGTACGCTGAATGATTTTCTCGGTGCCATGACGGAAGATGATGTCATGCCGGAGGCATTGCGTCGTTTTGAGGCAATGGTGGAAGAAGCAGCACGCAACGCTGAAGCCGCCTCTCAGAGCGCAGCGGCAGCAAAGAAATCAGAAACagcagc  >  1:556910/5‑300 (MQ=38)                                                                                                                                                    ggTGAACACGGTAGCCTCTGAAAATCCGGATGAAGCCGGGCGTTACAGCATGGATGTCGAGTATGGCCAGTACAGCGTCACCCTGCTGGTTGAAGGTTTTCCGCCTTCACATGCCGGAACCATTACCGTCTATGAAGGTTCCAGACCTGGTACGCTGAATGATTTTCTCGGTGCCATGACGGAAGATGATGTCATGCCGGAGGCATTGCGTCGTTTTGAGGCAATGGTGGAAGAAGCAGCACGCAACGCTGAAGCCGCCTCTCAGAGCGCAGCGGCAGCAAAGAAATCAGAAACagcagc  >  1:653683/1‑300 (MQ=38)                                                                                                                                                    ggTGAACACGGTAGCCTCTGAAAATCCGGATGAAGCCGGGCGTTACAGCATGGATGTCGAGTATGGCCAGTACAGCGTCACCCTGCTGGTTGAAGGTTTTCCGCCTTCACATGCCGGAACCATTACCGTCTATGAAGGTTCCAGACCTGGTACGCTGAATGATTTTCTCGGTGCCATGACGGAAGATGATGTCATGCAGGAGGCATTGCGTCGTTTTGAGGCAATGGTGGAAGAAGCAGCACGCAACGCTGAAGCCGCCTCTCAGAGCGCAGCGGCAGCAAAGAAATCAGAAAcagc     >  2:478587/1‑294 (MQ=38)                                                                                                                                                    ggTGAACACGGTAGCCNCTGAAAATCCGGATGAAGCCGGGCGTTACAGCATGGATGTCGAGTATGGCCAGTACAGCGTCACCCTGCTGGTTGAAGGTTTTCCGCCTTCACATGCCGGAACCATTACCGTCTATGAAGGTTCCAGACCTGGTACGCTGAATGATTTTCTAGGTGCCATGACGGAAGATGATGTCATGCCGGAGGCATTGCGTCGTTTTGAGGCAATGGTGGAAGAAGCAGCACGCAACGCTGAAGCCGCCTCTCNGAGCGCAgttgcagtaaangaaatcagaaacgggcc  >  1:659572/1‑272 (MQ=37)                                                                                                                                                                |                                                                                                                                                                                                                                                                                                TACGGGCGCCAGAAATGGCGCCTTTTTTATTTGTGGAGTGAATATG‑‑‑GCAGTACAGATTTCAGGTGTGCTGAAAGATGGTGCGGGAAAACCAATACAGAACTGCACTATTCAACTGAAGGCAAAGCGTAACAGCACCACGGTACTGGTGAACACGGTGGCCTCTGAAAATCCGGATGAAGCCGGGCGTTACAGCATGGATGTTGAGCATGGCCAGTACAGCGTCACCCTGCTGGTTGAAGGTTTTCCGCCTTCACATGCCGGAACCATTACCGTCTATGAAGGTTCCAGACCAGGTACGCTGAATGATTTTCTCGGTGCCATGACGGAAGATGATGTCATGCCGGAGGCATTGCGTCGTTTTGAGGCAATGGTGGAAGAAGCGGCACGCAACGCCGAAGCCGCCTCTCAGAGCGCAGCGGCGGCAAAGAAATCCGAAACTGCAGC  >  NC_012971/550507‑550950

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑