Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
MC JC	NC_000913	3,708,467	Δ168 bp		[proK]	[proK]

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	3708467	3708634	168	40 [0]	[22] 62	[proK]	[proK]

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3708466	0 (0.000)	40 (0.710)	24/374	0.9	100%	intergenic (‑761/+150)	dppA/proK	dipeptide ABC transporter periplasmic binding protein/tRNA‑Pro
	?	NC_000913	3708635 =	0 (0.000)					noncoding (58/77 nt)	proK	tRNA‑Pro

CGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCTGCGGGCCGTTGCTGGCGCAACGTTCTCTCGCTTCGCTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGTCCCGAACGAAGTGCGCTACCAGGCTGCGCCAATCACCGAATGCGGGGCGCATCTTACTGCGCAGATACGCCCTCGTCAATCCCTTAATAGCAAAATGCCTTTTGATCGGCGAGAAAGTCAGCAGGCCGCTTAGTTAGCCGCTGCCTCTTTTGCCTGCGGGATGTGACACCAGTTGTTGTTTTCGTTAATTCCACCATCCGGTGAAGTATAGCCAAGACAACCCATGATGGTATCGTACAGCTCTACGTGACGGCGTGGCACTTTCATGTCGGCTTCTTT  >  NC_000913/3708357‑3708933                                                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                                                                                           aaaagagatactgatttctgtcacaaatccattaatggatagtgagatattgggcgcaaatttggcatggaaatgtgtgtcgtgtagttcgaataaggcggtcgcgccgcatccgacaagggccggcacatttgcctgatgcgacgctgacgcgtcttatcatgcctacgtcgagtcgaacctccctgcccccggaggttctcatcctcatgagctgcagatgcaaaaaagcctactcgttgagcaggcttttcgaatttggtcgttgatagaggattCGAACCTCCGACCCCTTCGTcc                                                                                                                                                                                                                                                                                       <  2:188146‑M2/22‑1 (MQ=255)                    gtcacaaatccgttaatggatagtgagatatggggcgcaaatttggcaggtaaatgtgtgtcgtgtaggtcgaataagncggtcgcgccgcatccgacaatggccggcacatttgcctgatgcgacgctgacgcgtcttatcaggcctacgtcgagtcgaacctccctgcccccggaggttctcatcctcatgagctgcagatgcaaaaaagcctgctcgttgagcaggcttttcgaatttggtcggtgatagaggattCGAACCTCCGACCCCTTCGTCCCGAACGAAGTGCGCTACCa                                                                                                                                                                                                                                                                    <  1:145184‑M2/41‑1 (MQ=255)                    gtcacaaatccgttaatggatagtgagatatggggcgcaaatttggcagggaaatgtgtgtcgtgtagttcgaataaggcggtcgcgccgcatccgacaatggccggcacatttgcctgatgcgacgctgacgcgtcttatcaggcctacgtcgagtcgaacctccctgcccccggaggttctcatcctcatgagctgcagatgcaaaaaagcctgctcgttgagcaggcttttcgaatttggtcggtgatagaggattCGAACCTCCGACCCCTTCGTCCCGAACTAAGTGCGCTACCa                                                                                                                                                                                                                                                                    <  1:93248‑M2/41‑1 (MQ=255)                    gtcacaaatccgttaatggatagtgagatatggggcgcaaatttggcagggaaatgtgtgtcgtgtaggtcgaataagncggtcgcgccgcatccgacaatggccggcacatttgcctgatgcgacgctgacgcgtcttatcaggcctacgtcgagtcgaacctccctgcccccggaggttctcatcctcatgagctgcagatgcaaaaaagcctgctcgttgagcaggcttttcgaatttggtcggtgatagaggattCGAACCTCCGACCCCTTCGTCCCGAACGAAGTGCGCTACCa                                                                                                                                                                                                                                                                    <  1:145475‑M2/41‑1 (MQ=255)                    gtcacaaatccgttaatggatagtgagatatggggcgcaaatttggcagggaaatgtgtgtcgtgtaggtcgaataaggcggtcgcgccgcatccgacaatggccggcacatttgcctgatgcgacgctgacgcgtcttatcaggcctacgtcgagtcgaacctncctgcccccggaggttctcatcctcatgagctncagatgcaaaaaagcctgctcgttgagcaggcttttcgaatttggtcggtgatagaggattCGAACCTCCGACCCCTTCGTCCCGAACGAAGTGCGCTACCa                                                                                                                                                                                                                                                                    <  2:547998‑M2/41‑1 (MQ=255)                    gtcacaaatccgttaatggatagtgagatatggggcgcaaatttggcagggaaatgtgtgtcgtgtaggtcgaataaggcggtcgcgccgcatccgacaatggccggcacatttgcctgatgcgacgctgacgcgtcttatcaggcctacgtcgagtcgaacctccctgcccccggaggttctcatcctcatgagctgcagatgcaaaaaagcctgctcgttgagcaggcttttcgaatttggtcggtgatagaggattCGAACCTCCGACCCCTTCGTCCCGAACGAAGTGCGCTACCa                                                                                                                                                                                                                                                                    <  2:485714‑M2/41‑1 (MQ=255)                     tcacaaatccgttaatggatagtgagatatggtgcgcaaatttggcagggaaatgtgtgtcgtgtaggtcgaataaggcggtcgcgccgcatccgacaatggccggcacatttgcctgatgcgacgctgacgcgtcttatcaggcctacgtcgagtcgaacctccctgcccccggaggttctcatcctcatgagctgcagatgcaaaaaagcctgctcgttgagcaggcttttcgaatttggtcggtgatagaggattCGAACCTCCGACCCCTTCGTCCCGAACGAAGTGCGCTACCAg                                                                                                                                                                                                                                                                   <  2:464000‑M2/42‑1 (MQ=255)                       acaaatccgttaatggatagtgagatatggggcgcaaatttggcagggaaatgtgtgtcgtgtaggtcgaataaggcggtcgcgccgcatccgacaatggccggcacatttgcctgatgcgacgctgacgcgtcttatcaggcctacgtcgagtcgaacctccctgcccccggaggttctcatcctcatgagctgcagatgcaaaaaagcctgctcgttgagcaggcttttcgaatttggtcggtgatagaggattCGAACCTCCGACCCCTTCGTCCCGAACGAAGTGCGCTACCAGGc                                                                                                                                                                                                                                                                 <  1:180941‑M2/44‑1 (MQ=255)                         aaatccgttaatggatagttagatatggggcgcaaatttggcagggaaatgtttgtcgtgtaggtcgaataaggcggtcgcgccgcatccgacaatggccggcacatttgcctgatgcgacgctgacgcgtcttatcaggcctacgtcgagtcgaacctccctgcccccggaggttctcatcctcatgagctgcagatgcaaaaaagcctgctcgttgagcaggcttttcgaatttggtcgttgatagaggattCGAACCTCCGACCCCTTCGTCCCGAACGAAGTGCGCTACCAGGCTg                                                                                                                                                                                                                                                               <  1:546762‑M2/46‑1 (MQ=255)                                ttaatggatagtgagatatggggcgcaaatttggcagggaaatgtgtgtcgtgtaggtcgaataaggcggtcgcgccgcatccgacaatggccggcacatttgcctgatgcgacgctgacgcgtcttatcaggcctacgtcgagtcgaacctccctgcccccggaggttctcatcctcatgagctgcagatgcaaaaaagcatgctcgtngagcaggcttttcgaatttggtcggtgatagaggattCGAACCTCCGCCCCCTTCGTCCCGAACGAAGTGTGCTACCAGGCTGCGCCAAt                                                                                                                                                                                                                                                        >  2:563372‑M2/248‑300 (MQ=255)                                     ggatagtgagatatggggcgcaaatttggcagggaaatgtgtgtcgtgtaggtcgaataaggcggtcgcgccgcatccgacaatggccggcacatttgcctgatgcgacgctgacgcgtcttatcaggcctacgtcgagtcgaacctccctgcccccggaggttctnatcctcatgagctgcagatgcaaaaaagcctgctcgttgagcaggcttttcgaatttggtcggtgatagaggattCGAACCTCCGACCCCTTCGTCCCGAACGAAGTGTGCTACCAGGCTGCGCCAAtcaac                                                                                                                                                                                                                                                    >  2:231181‑M2/243‑297 (MQ=255)                                     ggatagtgagatatggggcgcaaatttggcagggaaatgtgtgtcgtgtaggtcgaataaggcggtcgcgccgcatccgacaatggccggcacatttgcctgatgcgacgctgacgcgtcttatcaggcctacgtcgagtcgaacctccctgcccccggaggttctcatcctcatgagctgcagatgcaaaaaagcctgctcgttgagcaggcttttcgaatttggtcggtgatagaggattCGAACCTCCGAACCCTTCGTCCCGAACGAAGTGCGCTCCCAGGCTGCACCAATCAcc                                                                                                                                                                                                                                                    >  2:40312‑M2/243‑299 (MQ=255)                                     ggatagtgagatatggggcgcaaatttggcagggaaatgtgtgtcgtgtaggtcgaataaggcggccgcgccgcatccgacaatggccggcacatttgcctgatgcgacgctgacgcgtcctctcaggcctacgtcgagtcgaacctccctgcccccggaggttctnatcctcatgagctgcagatgcaaaaaagcctgctcgttgagcaggcttttcgagtttggtcggtgatagaggattCGAACCTCCGACCCCTTAGTCCAGAACGAAGTGTGCTAACAGGCTGCGCCAATCAcc                                                                                                                                                                                                                                                    >  2:232341‑M2/243‑299 (MQ=255)                                            gagatatggggcgcaaatttggcagggaaatgtgtgtcgtgtaggtcgaataaggcggtcgcgccgcatccgacaatggccggcacatttgcctgatgcgacgctgacgcgtcttatcaggcctacgtcgagtcgaacctccctgcccccggaggttctcatcctcatgagctgcagatgcaaaaaagcctgctcgttgagcaggcttttcgaatttggtcngtgatagaggattCGAACCTCCGACCCCTTCGTCCCGAACGAAGTGCGCTACCAGGCTGCGCCAATCAACGAATGc                                                                                                                                                                                                                                              >  1:520548‑M2/236‑298 (MQ=255)                                                          aaatttggcatgtaaatgtgtgtcgtgtagttcgaataaggcggtcgcgccgcatccgacaatggccggcacatttgcctgatgcgacgctgacgcgtcttatcaggcctacgtcgagtcgaacctccctgcccccgtaggttctcatcctcatgagctgcanatgcaaaaaagcctgctcgttgagcaggctttncgaatttggtcgttgatagaggattCGAACCTCCGACCCCTTCGTCCCGAACGAAGTGCGCTACCAGGCTGCGCCAATCACCGAATGCGGGGCGCATCTTAc                                                                                                                                                                                                                                <  2:544320‑M2/77‑1 (MQ=255)                                                          aaatttggcagggaaatgtgtgtcgtgtagttcgaataaggcggtcgcgccgcatcctacaatggccggcacatttgcctgatgcgacgctgacgcgtcttatcaggcctacttcgagtcgaacctccctgcccccggaggttctcatcctcatgagctgcagatgcaaagaagcctgctcgttgagcaggcttttcgaatttggtcggtgatagaggattCGAACCTCCGACCCCTTCGTCCCGAACGAAGTGCGCTACCAGGCTGCGCCAATCACCGAATGCGGGGCGCATCTTACTg                                                                                                                                                                                                                              <  2:76796‑M2/79‑1 (MQ=255)                                                                    gggaaatgtgtgtcgtgtaggtcgaataaggcggtcgcgccgcatccgacaatggccggcacatttgcctgatgcgacgctgacgcgtcttatcaggcctacgtcgagtcgaacctccctgcccccggaggttctcatcctcatgagctgcagatgcaaaaaagcctgctcgttgagcaggcttttcgaatttggtcggtgatagaggattCGAACCTCCGACCCCTTCGTCCCGAACGAAGTGCGCTACCAGGCTGCGCCAATCACCGAATGCGGGGCGCATCTTACTGCGCAGATAc                                                                                                                                                                                                                     >  2:158821‑M2/212‑299 (MQ=255)                                                                    gggaaaggtgtgtcgtggaggtcgaagaaggcggtcgcgccgcatccgacaatggccggcacatttgcctgatgcgacgctgacgcgtcttatcaggcctacgtcgagtcgaacctccctgcccccggaggttctcatcctcatgagctgcagatgcaaaaaagcctgctcgttgagcaggcttttcgaatttggtcggtgatagaggattCGAACCTCCGACCCCTTCGTCCCGAACGAAGTGCGCTACCAGGCTGCGCCAATCACCGAATGCGGGGCGCATCTTACTGCGCAGATa                                                                                                                                                                                                                      <  1:659531‑M2/87‑1 (MQ=255)                                                                      gaaatgtgtgtcgtgtaggtcgaataaggcggtcgcgccgcatccgacaatggccggcacatttgcctgatgcgacgctgacgcgtcttatcaggcctacgtcgagtcgaacctccctgcccccggaggttttcatcctcatgagctgcagatgcaaaaaagcctgctcgttgagcaggcttttcgaatttggtcggtgatagaggattCGAACCTCCGACCCCTTCGTCCAGAACGAAGTGCGCTAACAGGCTGCGCCAATCACCGAATGCGGGGCGCATCTTACTGCGCAGATACGcc                                                                                                                                                                                                                  >  2:149260‑M2/210‑300 (MQ=255)                                                                      gaaatgtgtgtcgtgtaggtcgaataaggcggtcgcgccgcatccgacaatggccggcacatttgcctgatgcgacgctgacgcgtcttatcaggcctacgtcgagtcgaacctccctgcccccggaggttctcatcctcatgagctgcagatgcaaaaaagcctgctcgttgagcaggcttttcgaatttggtcggtgatagaggattCGAACCTCCGACCCCTTCGTCCCGAACGAAGTGCGCTACCAGGCTGCGCCAATCACCGAATGCGGGGCGCATCTTACTGCGCAGATa                                                                                                                                                                                                                      >  2:712593‑M2/210‑296 (MQ=255)                                                                      gaaatgtgtgtcgtgtaggtcgaataaggcggtcgcgccgcatccgacaatggccggcacatttgcctgatgcgacgctgacgcgtcttatcaggcctacgtcgagtcgaacctccctgcccccggaggttctcatcctcatgagctgcagatgcaaaaaagcctgctcgttgagcaggcttttcgaatttggtcggtgatagaggattCGAACCTCCGACCCCTTCGTCCCGAACGAAGTGCGCTACCAGGCTGCGCCAATCACCGAATGCGGGGCGCATCTTACTGCGCAGATa                                                                                                                                                                                                                      <  1:712593‑M2/87‑1 (MQ=255)                                                                       aagtgtgtgtcgtttaggtcgaataaggcggtcgcgccgcatccgacaatggccggcacatttgcctgatgcgacgctgacgcgtcttatcagtcctacgtcgagtcgaacctccctgcccccggaggttctcatcctcatgagctgcagatgcaaaaaagcctgctcgttgagcaggcttttcgaatttgttcggtgatagaggattCGAACCTCCGACCCCTTCGTCCCGAACGAAGTGCGCTACCAGGCTGCGCCAATCACCGAATGCGGGGCGCATCTTACTGCGCAGATACGccc                                                                                                                                                                                                                 <  2:196588‑M2/92‑1 (MQ=255)                                                                               gtcgtgtaggtcgaataaggcggtcgcgccgcatccgacaatggccggcacatttgcctgatgcgacgctgacgcgtcttatcagtcctacgtcgagtcgaacctccctgcccccggaggttctcatcctcatgagctgcagatgcaaaaaagcctgctcgttgagcaggcttttcgaatttggtcggtgatagaggattCGAACCTCCGACCCCTTCGTCCCGAACGAAGTGCGCTACCAGGCTGCGCCAATCACCGAATGCGGGGCGCATCTTACTGCGCAGATACGCCCTCGTCAAt                                                                                                                                                                                                         <  1:356748‑M2/100‑1 (MQ=255)                                                                               gtcgtgtaggtcgaataaggcggtcgcgccgcatccgacaatggccggcacatttgcctgatgcgacgctgacgcgtcttatcaggcctacgtcgagtcgaacctccctgcccccggaggttctcatcctcatgagctgcagatgcaaaaaagcctgctcgttgagcaggcttttcgaatttggtcggtgatagaggattCGAACCTCCGACCCCTTCGTCCCGAACGAAGTGCGCTACCAGGCTGCGCCAATCACCGAACGCGGGGCGCATCTTACTGCGCAGATACGCCCTCGTCAAt                                                                                                                                                                                                         <  1:355455‑M2/100‑1 (MQ=255)                                                                                  gtgtaggtcgaataaggcggtcgcgccgcatccgacaatggccggcacatttgcctgatgcgacgctgacgcgtcttatcaggcctacgtcgagtcgaacctncccgcccccggaggttctcatcctcatgagctncagatgcaaaaaagcctgctcgttgagcaggcttttcgaatttggtcggtgataggggattCGAACCTCCGAACCCTTCGTCCAGAACGAAGTGCGCTACCAGGCTGCGCCAATCACCGAATGCGGGGCGCATCTTACTGCGCAGATACGCACTCGTCAATcc                                                                                                                                                                                                       >  2:548164‑M2/198‑299 (MQ=255)                                                                                           gaataaggcggtcgcgccgcatccgacaatggccggcacatttgcctgatgcgacgctgacgcgtcttatcaggcctacttcgagtcgaacctccctgccccctgaggttctcatcctcatgagctgcagatgcaaaaaagcctgctcgttgagcaggcttttcgaatttggtcggtgatataggattCGAACCTCCGACCCCTTCGTCCCGAACGAAGTGCGCTACCAGGCTGCGCCAATCACCGAATGCGGTGCGCATCTTACTGCGCAGATACGCCCTCGTCAATCCCTTAATAGc                                                                                                                                                                                              <  2:400552‑M2/111‑1 (MQ=255)                                                                                           gaataaggcggtcgcgccgcatccgacaatggccggcacatttgcctgatgcgacgctgacgcgtcttatcaggcctacgtcgagtcgaacctccctgcccccggaggttctcatcctcatgagctgcagatgcaaaaaagcctgctcgttgagcaggcttttcgantttggtcggtgatagaggattCGAACCTCCGACCCCTTCGTCCCGAACGAAGTGCGCTACCAGGCTGCGCCAATCACCGAATGCGGGGCGCATCTTACTGCGCAGATACGCCCTCGTCAATCCATTAATAGCa                                                                                                                                                                                             >  2:224458‑M2/189‑300 (MQ=255)                                                                                           gaataaggcggtcgcgccgcatccgacaatggccggcacatttgcctgatgcgacgctgacgcgtcttatcaggcctacgtcgagtcgaacctccctgcccccggaggttctcatcctcatgagctgcagatgcaaaaaagcctgctcgttgagcaggcttttcgantttggtcggtgatagaggattCGAACCTCCGACCCCTTCGTCCAGAACGAAGTGCGCTACCAGGCTGCGCCAATCAACGAATGCGGGGCGCATCTTACTGCGCAGATACGCCCTCGTCAATCCCTTAATAGCa                                                                                                                                                                                             >  2:224466‑M2/189‑300 (MQ=255)                                                                                                                         ggccggcacatttgcctgatgcgacgctgacgcgtcttatcaggcctacgtcgagtcgaacctccctgcccccggaggttctcatcctcatgagctgcagatgcaaaaaagcctgctcgttgagcaggcttttcgaatttggtcggtgatagaggattCGAACCTCCGACCCCTTCGTCCCGAACGAAGTGCGCTACCAGGCTGCGCCAATCACCGAATGCGGGGCGCATCTTACTGCGCAGATACGCCCTCGTCAATCCCTTAATAGCAAACTGCCTTTTGATCGGCGAGAAAGTca                                                                                                                                                                 >  2:260415‑M2/159‑298 (MQ=255)                                                                                                                             tgcacatttgcctgattcgacgctgacgcgtcttatcaggcctacgtcgagtcgaacctccctgccctcgtaggttctcatcttcatgagctgcagatgcaaaaaagcctgctcgttgagcaggcttttcgaatttggtcggcgatagaggattCGAACCTCCGACCCCTTCGTCCCGAACGAAGTGCGCTACCAGGCTGCGCCAATCACCGAATGCGGGGCACATCTTACTGCGCAGATACGCCCTCGTCAATCCCTTAATAGc                                                                                                                                                                                              <  2:400147‑M2/111‑1 (MQ=255)                                                                                                                                                acgctgacgcgtcttatcaggcctacgtcgagtcgaacctccctgcccccggaggttctaatcctaatgagctgcagatgcaaaaaagcctgctcgttgagcaggcttttcgaatttggtcggtgatagaggattCGAACCTCCGACCCCTTCGTCCCGAACGAAGTGCGCTACCAGGCTGCGCCAATCACCGAATGCGGGGCGCATCTTACTGCGCAGATACGCCCTCGTCAATCCCTTAATAGCAAAATGCCTTTTGATCGGCGAGAAAGTCAACAGGCAGATTAGCTAGACGCTGcc                                                                                                                                        >  2:382711‑M2/136‑300 (MQ=255)                                                                                                                                                         cgtcttatcaggcctacgtcgagtcgaacctccctgcccccggaggttctcatcctcatgagctgcagatgcaaaaaagcctgctcgttgagcaggtttttcgaatttggtcggtgatagaggattCGAACCTCCGACCCCTTCGTCCCGAACGAAGTGCGCTACCAGGCTGCGCCAATCACCGAATGCGGGGCGCATCTTACTGCGCAGATACGCCCTCGTCAATCCCTTAATAGCAAAATGCCTTTTGATCGGCGAGAAAGTCAGCAGGCCGCTTAGTTAGCCGCTGCCTCTTTTGcc                                                                                                                               >  1:414930‑M2/127‑300 (MQ=255)                                                                                                                                                         cgtcttatcaggcctacgtcgagtcgaacctccctgcccccggaggttctcatcctcatgagctgcagatgcaaaaaagcctgctcgttgagcaggcttttcgaatttggtcggtgatagaggattCGAACCTCCGACCCCTTCGTCCCGAACGAAGTGCGCTACCAGGCTGCGCCAATCACCGAATGCGGGGCGCATCTTACTGCGCAGATACGCCCTCGTCAATCCCTTAATAGCAAAATGCCTTTTGATCGGCGAGAAAGTCAGCAGGCCGCTTAGTTAGCCGCTGCCTCTTTTGcc                                                                                                                               >  1:462328‑M2/127‑300 (MQ=255)                                                                                                                                                                   ggcctacgtcgagtcgaacctccctgcccccggaggttctcatcctcatgagctgcagatgcaaaaaagcctgctcgttgagcaggcttttcgaatttggtcggtgatagaggattCGAACCTCCGACCCCTTCGTCCCGAACGAAGTGCGCTACCAGGCTGCGCCAATCACCGAATGCGGGGCGCATCTTACTGCGCAGATACGCCCTCGTCAATCCCTTNATAGCAAAATGCCTTTTGATCGGCGAGAAAGTCAGCAGGCCGCTTAGTTAGCCGCTGCCTCTTTTGCCTGCGGGAtgt                                                                                                                     >  1:164045‑M2/117‑300 (MQ=255)                                                                                                                                                                   ggcctacgtcgagtcgaacctccctgcccccggaggttctcatcctcatgagctgcagatgcaaaaaagcctgctcgttgagcaggcttttcgaatttggtcggtgatagaggattCGAACCTCCGACCCCTTCGTCCCGAACGAAGTGCGCTACCAGGCTGCGCCAATCACCGAATGCGGGGCGCATCTTACTGCGCAGATACGCCCTCGTCAATCCCTTAATAGCAAAATGCCTTTTGATCGGCGAGAAAGTCAGCAGGCCGCTTAGTTAGCCGCTGCCTCTTTTGCCTGCGGGAtgt                                                                                                                     >  1:295973‑M2/117‑300 (MQ=255)                                                                                                                                                                   ggcctacgtcgagtcgaacctccctgcccccggaggttctcatcctcatgagctgcagatgcaaaaaagcctgctcgttgagcaggcttttcgaatttggtcggtgatagaggattCGAACCTCCGACCCCTTCGTCCCGAACGAAGTGCGCTACCAGGCTGCGCCAATCACCGAATGCGGGGCGCATCTTACTGCGCAGATACGCCCTCGTCAATCCCTTAATAGCAAAATGCCTTTTGATCGGCGAGAAAGTCAGCAGGCCGCTTAGTTAGCCGCTGCCTCTTTTGCATGCGGGAtgt                                                                                                                     >  1:33521‑M2/117‑300 (MQ=255)                                                                                                                                                                   ggcctacgtcgagtcgaacctccctgcccccggaggttctcatcctcatgagctgcagatgcaaaaaagcctgctcgttgagcaggcttttcgaatttggtcggtgatagaggattCGAACCTCCGACCCCTTCGTCCCGAACGAAGTGCGCTACCAGGCTGCGCCAATCACCGAATGCGGGGCGCATCTTACTGCGAAGATACGCCCTCGTCAATCCCTTAATAGCAAAATGCCTTTTGATCGGCGAGGAAGTCAGCAGGCCGCTTAGTTAGCCGCTGCCTCTTTTGCCTGCGGGAtgt                                                                                                                     >  1:296455‑M2/117‑300 (MQ=255)                                                                                                                                                                   ggcctacgtcgagtcgaacctccctgcccccggaggttctcatcctcatgagctgcagatgcaaaaaagcctgctcgttgagcaggcttttcgaatttggtcggtgatagaggattCGAACCTCAGACCCCTTCGTCCCGAACGAAGTGCGCTACCAGGCTGAGCCAATCACCGAATGCGGGGCGCATCTTACTGCGCAGATACGCCCTNGTCAATCCCTTAATAGCAAAATGCCTTTTGATCGGCGAGAGAGTCAGTAGGTCGCTTAGTTAGCAGCTGCCTCTTTTGCCTGCGGGAtgt                                                                                                                     >  2:575555‑M2/117‑300 (MQ=255)                                                                                                                                                                        acgtcgagtcgaacctccctgcccccggaggttctcatcctcatgagctgcagatgcaaaaaagcctgctcgttgagcaggcttttcgaatttggtcggtgatagaggattCGAACCTCCGACCCCTTCGTCCCGAACGAAGTGCGCTACCAGGCTGCGCCAATCACCGAATGCGGGGCGCATCTTACTGCGCAGATACGCCCTCGTCAATCCCTTAATAGCAAAATGCCTTTTGATCGGCGAGAAAGTCAGCAGGCCGCTTAGTTAGCCGCTGCCTCTTTTGCCTGCGGGATGTGacac                                                                                                                <  1:494707‑M2/189‑1 (MQ=255)                                                                                                                                                                          gtcgagtcgaacctccctgcccacggaggttctcatcctcatgagctgcagatgcaaaaaagcctgctcgttgagcaggcttttcgaatttggtcggtgatagaggattCGAACCTCCGACCCCTTCGTCCCGAACGAAGTGCGCTACCAGGCTGCGCCAATCACCGAATGCGGGGCGCATCTTACTGCGCAGATACGCCCTCGTCAATCCCTTAATAGCAAAATGCCTTTTGATCGGCGAGAAAGTCAGCAGGCCGCTTAGTTAGCCGCTGCCTCTTTTGCCTGCGGGATGTGACAcc                                                                                                               <  1:186251‑M2/190‑1 (MQ=255)                                                                                                                                                                                            gCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGTCCCGAACGAAGTGCGCTACCAGGCTGCGCCAATCACCGAATGCGGGGCGCATCTTACTGCGCAGATACGCCCTCGTCAATCCCTTAATAGCAAAATGCCTTTTGATCGGCGAGAAAGTCAGCAGGCCGCTTAGTTAGCCGCTGCCTCTTTTGCCTGCGGGATGTGACACCAGTTGTTGTTTTCGTTAAt                                                                                            >  1:496061/1‑300 (MQ=255)                                                                                                                                                                                            gCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGTCCCGAACGAAGTGCGCTACCAGGCTGCGCCAATCACCGAATGCGGGGCGCATCTTACTGCGCAGATACGCCCTCGTCAATCCCTTAATAGCAAAATGCCTTTTGATCGGCGAGAAAGTCAGCAGGCCGCTTAGTTAGCCGCTGCCTATTTTGCATGCGGGATGTGACAACAGTTGTTGTTTTCGttcat                                                                                            >  2:687658/1‑297 (MQ=255)                                                                                                                                                                                            gCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGAACCCTTCGTCCCGAACGAAGTGCGCTAACAGGCTGCGCCAATCACCGAATGCGGGGCGCATCTTACTGCGCAGATAAGCCCTCGTCAATCCCTTAATAGCAAAATGCCTTTTGATCGGCGAGAAAGTCAGCAGGCCGCTTAGTTAGCCGCTGCCTCTTTTGCCTGCGGGATGTGACACCAGTTGTTGTTTTCGTTAAt                                                                                            >  2:176731/1‑300 (MQ=255)                                                                                                                                                                                              ccccGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGTCCCGAACGAAGTGCGCTACCAGGCTGCGCCAATCACCGAATGCGGGGCGCATCTTACTGCGCAGATACGCCCTCGTCAATCCCTTAATAGCAAAATGCCTTTTGATCGGCGANAAAGTCAGCAGGCCGCTTAGTTAGCCGCTGCCTCTTTTGCCTGCGGGATGTGACACCAGTTGTTGTTTTCGTTAATTc                                                                                          >  1:519333/1‑300 (MQ=255)                                                                                                                                                                                                  ggAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGTCCCGAACGAAGTGCGCTACCAGGCTGCGCCAATCACCGAATGCTGGGCGCATCTTACTGCGCAGATAAGCCCTCGTCAATCCCTTAATAGCAAAATGCCTTTTGATCGGCGAGAAAGTCAGCAGGCCGCTTAGTTAGCAGCTGCCTCTTTTGCCGGTGGGAtgtggtatcgggtgtgggtttcgtgggggatagt                                                                                      <  1:176731/300‑31 (MQ=38)                                                                                                                                                                                                     ggTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGTCCCGAACGAAGTGCGCTACCAGGCTGCGCCAATCACCGAATGCGGGGCGCATCTTACTGCGCAGATACGCCCTCGTCAATCCCTTAATAGCAAAATGCCTTTTGATCGGCGAGAAAGTCAGCAGGCCGCTTAGTTAGCCGCTGCCTCTTTTGCCTGCGGGATGTGACACCAgttgttgtt                                                                                                     <  1:510003/282‑1 (MQ=255)                                                                                                                                                                                                     ggTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGTCCCGAACGAAGTGCGCTACCAGGCTGCGCCAATCACCGAATGCGGGGCGCATCTTACTGCGCAGATACGCCCTCGTCAATCCCTTAATAGCAAAATGCCTTTTGATCGGCGAGAAAGTCAGCAGGCCGCTTAGTTAGCCGCTGCCTCTTTTGCCTGCGGGATGTGACACCAgttgttgtt                                                                                                     >  2:510003/1‑282 (MQ=255)                                                                                                                                                                                                            aTCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGTCCCGAACGAAGTGCGCTACCAGGCTGCGCCAATCACCGAATGCGGGGCGCATCTTACTGCGCAGATACGCCCTCGTCAATCCCTTAATAGCAAAATGCCTTTTGATCGGCGAGAAAGTCAGCAGGCCGCTTAGTTAGCCGCTGCCTCTTTTGCCTGCGGGATGTGACACCAGTTGTTGTTTTCGTTAATTCCACCATCCGGTGa                                                                             <  1:499548/299‑1 (MQ=255)                                                                                                                                                                                                            aTCCTCATGAGCGGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGTCCCGAACGAAGTGCGCTACCAGGCTGCGCCAATCACCGAATGCGGGGCGCATCTTACTGCGCAGATACGCCCTCGTCAATCCCTTAATAGCAAAATGCCTTTTGATCGGCTAGAAAGTCAGCAGGCCGCTTAGTTAGCCGCTGCCTCTTTTGCCTGCGGGATGTGACACCAGTTGTTGTTTTCGTTAATTCCACCATCCGGTGa                                                                             <  1:499569/299‑1 (MQ=255)                                                                                                                                                                                                                tCATGAGCTGCAGATGCAAAAAAGCCTACTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGATCCCTTCGTCCCGAACGAAGTGCGCTACCAGGCTGCGCCAATCACCGAATGCGGGGCGCATCTTACTGCGCAGATACGCCCTCGTCAATCCCTTAATAGCAAAATGCCTTTTGATCGTCGAGAAAGTCAGCAGGCCGCTTAGTTAGCCGCTGCCTCTTTTGCCTGCGGGATGTGACACCAGTTGTTGTTTTCGTTAATTCCACCATCCGGTGAAGtat                                                                        <  2:385851/300‑1 (MQ=255)                                                                                                                                                                                                                     aGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACNCCTTCGTCCCGAACGAAGTGCGCTACCAGGCTGCGCCAATCACCGAATGCTGGGCGCATCTTACTGCGCAGATACGCCCTCGTCAATCCCTTAATAGCAAAATGCCTTTTGATCGGCGAGAAAGTCAGCAGGCCGCTTAGTTAGCCGCTGCCTCTTTTGCCTGCGGGATGTGACACCAGTTGTTGTTTTCGTTAATTCCACCATCCGGTTAAGTATAGCCa                                                                   <  1:162444/300‑1 (MQ=255)                                                                                                                                                                                                                                    aaaGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCTACCCCTTCGTCCCGAACGAAGTGCGCTACCAGGCTGCGCCAATCACCGAATGCGGGGCGCATCTTACTGCGCAGATACGCCCTCGTCAATCCCTTAATAGCAAAATGCCTTTTGATCGGCGAGAAAGTCAGCAGGCCGCTTAGTTAGCCGCTGCCTCTTTTGCCTGCGGGATGTGACACCAGTTGTTGTTTTCGTTAATTCCACCATCCGGTGAAGTATAGCCAAGACAACCCatgatg                                                    <  2:322234/300‑1 (MQ=255)                                                                                                                                                                                                                                             tctttGAGCATGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGTCCCGAACGAAGTGCGCTACCAGGCTGCGCCAATCACCGAATGCGGGGCGCATCTTACTGCGCAGATACGCCCTCGTCAATCCCTTAATAGCAAAATGCCTTTNGATCGGCGAGAAAGTCAGCAGGCCGCTTAGTTNGCCGCTGCCTCTTTTGCCTGCGGGATGTGACACCAGTTGTTGTTTTCGTTAATTCCACCATCCGGTGAAGTATAGCCAAGACAACCCATGATGGTATCGTAc                                           <  2:553165/297‑1 (MQ=255)                                                                                                                                                                                                                                               gTTGAGCAGGCTTTTCGAATGTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGTCCCGAACGAAGTGCGCTACCAGGCTGCGCCAATCACCGAATGCGGGGCGCATCTTACTGCGCAGATACGCCCTCGTCAATCCCTTAATAGCAAAATGCCTTTTGATCGGCGAGAAAGTCAGCAGGCCGCTTAGTTAGCCGCTGCCTCTTTTGCCTGCGGGATGTGACACCAGTTGTTGTTTTCGTTAATTCCACCATCCGGTGAAGTATAGCCAAGACAACCCATGATGGTATCGTACAg                                         <  1:580024/300‑1 (MQ=255)                                                                                                                                                                                                                                                ttGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCAAACCTCCGACCCCTTCGTCCCGAACGAAGTGCGCTACCAGGCTGCGCCAATCACCGAATGCGGGGCGCATCTTACTGCGCAGATACGCCCTCGTCAATCCCTTAATAGCAAAATGCCTTTTGATCGGCGAGAAAGTCAGCAGGCCGCTTAGTTAGCCGCTGCCTCTTTTGCCTGCTGGATGTGACACCAGTTGTTGTTTTCGTTAATTCCACCATCCGGTGAAGTATAGCCAAGACAACCCATGATGGTATCGTACAGc                                        <  2:306508/300‑1 (MQ=255)                                                                                                                                                                                                                                                  gAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGTCCCGAACGAAGTGCGCTACCAGGCTGCGCCAATCACCGAATGCGGGGCGCATCTTACTGCGCAGATACGCCCTCGTCAATCCCTTAATAGCAAAATGCCTTTTGATCGGCGAGAAAGTCAGCAGGCCGCTTAGTTAGCCGCTGCCTCTTTTGCCTGCGGGATGTGACACCAGTTGTTGTTTTCGTTAATTCCACCATCCGGTGAAGTATAGCCAAGACAACCCATGATGGTATCGTACAGctc                                      >  1:427375/1‑300 (MQ=255)                                                                                                                                                                                                                                                       ggCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGTCCCGAACGAAGTGCGCTACCAGGCTGCGCCAATCACCGAATGCGGGGCGCATCTTACTGCGCAGATACGCCCTCGTCAATCCCTTAATAGCAAAATGCCTTTTGATCGGCGAGAAAGTCAGCAGGCCGCTTAGTTAGCCGCTGCCTCTTTTGCCTGCGGGATGTGACACCAGTTGTTGTTTTCGTTAATTCCACCATCCGGTGAAGTATAGCCAAGACAACCCATGATGGTATCGTACAGCTCTACGt                                 <  2:594909/300‑1 (MQ=255)                                                                                                                                                                                                                                                                          gTGATAGAGGATTCGANCCTCCGACCCCTTCGTCCCGAACGAAGTGCGCTACCAGGCTGCGCCAATCACCGAATGCGGGGCGCATCTTACTGCGCAGATACGCCCTCGTCAATCCCTTAATAGCAAAATGCCTTTTGATCGGCGAGAAAGTCAGCAGGCCGCTTAGTTAGCCGCTGCCTCTTTTGCCTGCGGGATGTGACACCAGTTGTTGTTTTCGTTAAGTCCACCATCCGGTGAAGTATAGCCAAGACAACCCATGATGGNATCGTACAGCTCTACGTGNCGGCGTGGCACTTTCAt              >  1:623494/1‑300 (MQ=255)                                                                                                                                                                                                                                                                          gTGATAGAGGATTCGAACCTCCGACCCCTTCGTCCCGAACGAAGTGCGCTACTAGGCTGCGCCAATCACCGAATGCGGGGCGCATCTTACTGCGCAGATACGCCCTCGTCAATCCATTAATAGCAAAATGCATTTTGATCGGCGAGAAAGTCAGCAGGCCGCTTAGTTAGCCGCTGCCTCTTTTGCCTGCGGGATGTGACACCAGTTGTTGTTTTCGTTAATTCCACCATCCGGTGAAGTATAGCCAAGACAACACATGATGGTATCGTACAGCTCTACGTGAAGGCGTGGAACTTTCAt              >  2:86056/1‑300 (MQ=255)                                                                                                                                                                                                                                                                          gTGATAGAGGATTCGAACCTCCGACCCCTTCGTCCCGAACGAAGTGCGCTACCAGGCTGCGCCAATCACCGAATGCGGGGCGCATCTTACTGCGCAGATACGCCCTCGTCAATCCCTTAATAGCAAAATGCCTTTTGATCGGCGAGAAAGTCAGCAGGCCGCTTAGTTAGCCGCTGCCTCTTTTGCCTGCGGGATGTGACACCAGTTGTTGTTTTCGTTAATTCCACCATCCGGTGAAGTATAGCCAAGACAACCCATGATGGTATCGTACAGCTCTACGTGACGGCGTGGCACTTTCAt              >  1:595170/1‑300 (MQ=255)                                                                                                                                                                                                                                                                          gTGATAGAGGATTCGAACCTCCGACCCCTTCGTCCCGAACGAAGTGCGCTACCAGGCTGCGCCAATCACCGAATGCGGGGCGCATCTTACTGCGCAGATACGCCCTCGTCAATCCATTAATAGCAAAATGCCTTTTGATCGGCGAGAAAGTCAGCAGGCCGCTTAGTTAGCCGCTGCCTCTTTTGCCTGCGGGATGTGACACCAGTTGTTGTTTTCGTTAATTCCACCATCCGGTGAAGTATAGCCAAGACAACCCATGATGGTATCGTACAGCTCTACGTGACGGCGTGGCCCTTTCAt              >  2:632687/1‑300 (MQ=255)                                                                                                                                                                                                                                                                                      tCGAACCTCCGACCCCTTCGTCCCGAACGAAGTGCGCTACCAGGCTGCGCCAATCACCGAATGCGGGGCGCATCTTACTGCGCAGATACGCCCTCGTCAATCCCTTAATAGCAAAATGCCTTTTGATCGGCGAGAAAGTCAGCAGGCCGCTTAGTTAGCCGCTGCCTCTTTTGCCTGCGGGATGTGACACCAGTTGTTGTTTTCGTTAATTCCACCATCCGGTGAAGTATAGCCAAGACAACCCATGATGGTATCGTACAGCTCTACGTGACGGCGTGGCACTTTCATGTCGGCTTCttt  <  2:164045/300‑1 (MQ=255)                                                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                                                                                           CGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCTGCGGGCCGTTGCTGGCGCAACGTTCTCTCGCTTCGCTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGTCCCGAACGAAGTGCGCTACCAGGCTGCGCCAATCACCGAATGCGGGGCGCATCTTACTGCGCAGATACGCCCTCGTCAATCCCTTAATAGCAAAATGCCTTTTGATCGGCGAGAAAGTCAGCAGGCCGCTTAGTTAGCCGCTGCCTCTTTTGCCTGCGGGATGTGACACCAGTTGTTGTTTTCGTTAATTCCACCATCCGGTGAAGTATAGCCAAGACAACCCATGATGGTATCGTACAGCTCTACGTGACGGCGTGGCACTTTCATGTCGGCTTCTTT  >  NC_000913/3708357‑3708933

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑