Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
MC JC	NC_000913	696,831	Δ109 bp		[glnU]	[glnU]

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	696831	696939	109	57 [0]	[37] 94	[glnU]	[glnU]

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 696830	0 (0.000)	57 (0.620)	41/436	0.7	100%	noncoding (1/75 nt)	glnW	tRNA‑Gln
	?	NC_000913	696940 =	0 (0.000)					intergenic (‑1/+23)	glnU/leuW	tRNA‑Gln/tRNA‑Leu

AAATTGGCTGGGGTACGAGGATTCGAACCTCGGAATGCCGGAATCAGAATCCGGTGCCTTACCGCTTGGCGATACCCCAACAAATTGGTTTTGAATTTGCCGAACATATTCGATACATTCAGAATTTGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCAATAACCGGGCGGTGAACCGCTTACTCGAAGAAGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCATCCGTACAACGCTTTCTGGTGAATGGTGCGGGAGGCGAGACTTGAACTCGCACACCTTGCGGCGCCAGAACCTAAATCTGGTGCGTCTACCAATTTCGCCACTCCCGCAAAA  >  NC_000913/696538‑697051                                                                                                                                                                                                                                                                                                     |                                                                                                                                                                                                                              aaaTTGGCTTGGGTACGATGATTCGAACCTCGGAGTGTCGGAATCAGAATCCGGTGCCTTACCGCTTGGCGATACCCCAACAAATTGGTTTTGAATTTGCCGAACATATTCGATACATTCAGAATTTGGTTGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCAtccgtac                                                                                                                                                                                                                        <  2:567852‑M1/300‑8 (MQ=255)      ggcttggggacgagagtgcgaacctcggaatgccggaATCAGAATCCGGGGCCTTACCGCTTGGCGAGACCCCAAAAAAGTGGTTTTGAATTGGTTGAGCATATTCGATACATTCAGAATTTGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGATTGATATGCTCTAACCAACTGAGCGACTTAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCAtccgtacaacgc                                                                                                                                                                                                                   <  2:27506‑M1/282‑13 (MQ=255)      ggCTTGGGTACTAGGATGCGAACCTCGGAATGCCGGAATCAGAATCCGGTGTCTTACCGCTTGTCGATACCCCAACAAATTGGTTTTGAATTTGCCGAACATATTCGATACATTCAGAATTTGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCGAACCAACTGAGCTACGTAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGGATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCAtccgtacaacgc                                                                                                                                                                                                                   <  2:1000405‑M1/300‑13 (MQ=255)          ggggTACGAGGATTCGAACCTCGGAATGCCGGAATCAGAATCCGGTGCCTTACCGCTTGGCGATACCCCAACAAATTGGTTTTGAATTTGCCGAACATATTCGATACATTCAGAATTTGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACAGGTGCCTTACCGCTTGGCGATACCCCAtccgcaaaacgctttc                                                                                                                                                                                                               >  1:699860‑M1/1‑284 (MQ=255)           gggTACGAGGATTCGAACCTCGGAATGCCGGAATCAGAATCCGGTGCCTTACCGCTTGGCGATACCCCAACAAATTGGTTTTGAATTTGCCGAACATATTCGATACATTCAGAATTTGGTGGCTACGACGGGATTNGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAACCCGGTGCCTTACCGCTTGGCGATACCCCAtccgtacaacgcggtct                                                                                                                                                                                                              >  2:770174‑M1/1‑283 (MQ=255)           gggTACGAGGATTCGAACCTCGGAATGCCGGAATCAGAATCCGGTGCCTTACCGCTTGGCGATACCCCAACAAATTGGTTTTGAATTTGCCGAACATATTCGATACATTCAGAATTTGGTGGCTACGACGGGATTNGAACCTGTGACCCCATCATTATGAGTGATGTACTCTAACCAACTGAGCTACGTAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCATTAACGATTGGCGGTATCCCAtc                                                                                                                                                                                                                             >  2:770018‑M1/1‑283 (MQ=255)           gggTACGAGGATTCGAACCTCGGAATGCCGGAATCAGAATCCGGTGCCTTACCGCTTGGCGATACCCCAACAAATTGGTTTTGAATTTGCCGAACATATTCGATACATTCAGAATTTGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTCTTCGATGACTGGGGTACCTGGATTCGACCCATGGCATGCCGGTATCACCACCCGGTGCCTTCCCGCTTAACGATACCCCAtccgcacaccactttct                                                                                                                                                                                                              >  1:973518‑M1/1‑283 (MQ=255)             gtactgtgattcgaaCCGAGGAATGAAGGAATCAGAATCCGGTGCCTTACCACTGGGCGAGACCCCAACAAATTGGTTTTGAATTTGCCGAACGTATTCGATACATCCAGAATTTGTTGGCTACGACGGGAGTNGAACCTGTGACCCCATAATTATGAGTGATGTGCTCGAACCAACTGAGCTACGTAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCAtccgtacaacgctttctgg                                                                                                                                                                                                            <  2:325815‑M1/293‑20 (MQ=255)                          aaCCTCGGAATGCCGGAATCAGAATCCGGTTCCTTACCGCTTGGCGATACCCCAACAAATTGGTTTTGAATTTGCCGAACATATTCGATACATTCAGAATTTGGTTGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCAtccgtacaacgctttctggtgaatgg                                                                                                                                                                                                     <  2:924121‑M1/294‑27 (MQ=255)                           aCCTCGGAATGCCGGAATCAAAATCCGGTGCCTTACCGTTTGTCGATACCCCAACAAATTGTTTTTGAATTTTCCGAACATATTCGATACATTCAGAATTTGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACATAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCAtccgtacaacgctttctggtgaatggtgcggga                                                                                                                                                                                              <  2:449239‑M1/300‑34 (MQ=255)                                 gAATGCCGGAATCAGAATCCGGTGCCTTACCGCTTGGCGATACCCCAACAAATTGGTTTTGAATTTGCCGAACATATTCGATACATTCAGAATTTGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCAtccgtacaacgctttctggtgaatggtgcgggaggcgag                                                                                                                                                                                        <  1:575096‑M1/300‑40 (MQ=255)                                    tGCCGGAATCAGAATCCGGTGCCTTACCGCTTGGCGATACCCCAACAAATTGGTTTTGAATTTGCCGAACATATTCGATACATTCAGAATTTGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCAtccgtacaacgctttctggtgaatggtgcgggaggcgagact                                                                                                                                                                                     <  1:508876‑M1/300‑43 (MQ=255)                                         gAATCAGAATCCGGTGCCTTACCGCTTGGCGATACCCCAACAAATTGGTTTTGAATTTGCCGAACATATTCGATACATTCAGAATTTGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTCACCCACTACACTACGTAACCAGATTGTCTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCAAtccgtaaaaagctttctggtgaatggtgcgggaggcgagacttgcac                                                                                                                                                                                >  2:413689‑M1/1‑253 (MQ=255)                                                 aTCCGGTGCCTTACCGCTTTGCGATACCCCAACAAATTGGTTTTGAATTTGCCGAACATATTCGATACATTCAGAATTTGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCAtccgtacaacgctttctggtgaatggtgcgggaggcgagacttgaactcgcacac                                                                                                                                                                        <  1:179831‑M1/300‑56 (MQ=255)                                                 aTCCGGTGCCTTACCGCTTGGCGATACCCCAACAAATTGGTTTTGAATTTGCCGAACATATTCGATACATTCAGAATTTGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCAtccgtacaacgctttctggtgaatggtgcgggaggcgagacttgaactcgcacac                                                                                                                                                                        <  1:179497‑M1/300‑56 (MQ=255)                                                     ggTGCCTTACCGCTTTGCGATACCCCAACAAATTGGTTTTGAATTTGCCGAACATAGTCGATACATTCAGAATTTGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCAtccgtacaacgctttctggtgaatggtgcgggaggcgagacttgaactcgcacacct                                                                                                                                                                      <  2:309029‑M1/298‑58 (MQ=255)                                                     ggTGCCTTACCGCTTGTCGATACCCCAACAAATTGGTTTTGAATTTGCCGAACATATTCGATACATTCAGAATTTGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCAtccgtacaacgctttctggtgaatggtgcgggaggcgagacttgaactcgcacacct                                                                                                                                                                      <  1:563330‑M1/298‑58 (MQ=255)                                                     ggTGCCTTACCGCTTGGCGATACCCCAACAAATTGGTTTTGAATTTGCCGAACATATTCGATACATTCAGAATTTGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCAtccgtacaacgctttctggtgaatggtgcgggaggcgagacttgaactcgcacacct                                                                                                                                                                      <  1:568956‑M1/298‑58 (MQ=255)                                                      gTGCCTTACCGCTTGGCGATACCCCAACAAATTGGTTTTGAATTTGCCGAACATATTCGATACATTCAGAATTTGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCAtccgtacaacgctttctggtgaatggtgcgggaggcgagacttgaactcgcacaccttgc                                                                                                                                                                   >  1:942516‑M1/1‑240 (MQ=255)                                                           ttACCGCTTGGCGATNCCCCAACAAATTGGTTTTNAATTTGCCGAACATATTCGATACATTCAGAATTTGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCAtccgtacaacgctttctggtgaatggtgcgggaggcgagacttgaantcgcacaccttgcggc                                                                                                                                                                <  1:864399‑M1/298‑64 (MQ=255)                                                                 cTTGGCGATACCCCAACAAATTGGTTTTGAATTTGCCGAACATATTCGATACATTCAGAATTTGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCAtccgtacaacgctttctggtgaatggtgcgggaggcgagacttgaactcgcacaccttgcggcgccagaac                                                                                                                                                        >  1:943844‑M1/1‑229 (MQ=255)                                                                     gCGATACCCCAACAAATTGGTTTTGAATTTGCCGAACATATTCGATACATTCAGAATTTGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCAtccgtacaacgctttctggtgaatggtgcgggaggcgagacttgaactcgcacaccttgcggcgccagaacctaa                                                                                                                                                    >  1:51455‑M1/1‑225 (MQ=255)                                                                       gATACCCCAACAAATTGGTTTTGAATTTGCCGAACATATTCGATACATTCAGAATTTGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGATTGATGTGCTCTAACCAACTGAGCTACGTAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCAtccgtacaacgctttctggtgaatggtggggaggcgagacttgaactcgcacaccttgcggcgccagaacctaaatc                                                                                                                                                  <  1:568367‑M1/300‑78 (MQ=255)                                                                        aTACCCCAACAAAGTGGGTTTGAATGTGCCGAGCAGATTCGATACATTCAGAATTTGGTGGCTGCGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCAtccgtacaacgctttctggtgaatggtgcgggaggcgagacttgaactcgcacacct                                                                                                                                                                      <  2:309810‑M1/279‑58 (MQ=255)                                                                               aacaaATTGGTTTTGAATTTGCCGAACATATTCGATACATTCAGAATTTGGTGGCTACGACGGGATTCGAACCTGTNACCCCATCATTATGATTGATGTGCTCTAACCAACTGAGCTACGTAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCAtccgtacaacgctttctggtgaatggtgcgggaggcgagacttgaactcgcacaccttgcggcgccagaacctaaatctggtg                                                                                                                                            <  1:209663‑M1/298‑84 (MQ=255)                                                                               aacaaATTGGTTTTGAATTTGCCGAACATATTCGATACATTCAGAATTTGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCAtccgtacaacgctttctggtgaatggtgcgggaggcgagacttgaactcgcacaccttgcggcgccagaacctaaatctggtg                                                                                                                                            <  2:942516‑M1/298‑84 (MQ=255)                                                                                             gAATTCGCCTAACATATTCGATACATTCAGAATTTGGTGGCTGCGACTTGATTCGAGCCGGTGACCCCATCATTATGAGTGAGGTGCTCTAACCAACTGAGCTACGTAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCAtccgtacaacgctttctggtgaatggtgcgggaggcgagacttgaactcgcacacct                                                                                                                                                                      <  2:309863‑M1/258‑58 (MQ=255)                                                                                                           tatTCGATACATTCAGAATTTGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCACAAACCGGTGCCTTACCGCTTGGCGATACCACCtccgtacaacgatttctggtgaatggtgcggggggcgagacttgaactcgcacaccttgcggagcaaggaaataaatctggtgcgtctaccaatttcgccactaccgcaaa                                                                                                                >  2:353693‑M1/1‑187 (MQ=255)                                                                                                                     aTTCAGAATTTGGTGGCTACGACTGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCAtccgtacaacgctttctggtgaatggtgcgggaggcgagacttgaactcgcacaccttgcggcgccagaacctaaatctggtgcgtctaccaatttcgccactcccgcaaaaaaagatggt                                                                                                      >  1:971178‑M1/1‑177 (MQ=255)                                                                                                                                   ggCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAAACAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCAtccgtacaacgctttctggtgaatggtgcgagaggcgagacttgaactcgcacaccttgcggcgccagaacctaaatctggtgcgtctaccaatttcgcacctcccgcaaaaaaagatggcggctacgacgggatt                                                                                       >  2:23281‑M1/1‑163 (MQ=255)                                                                                                                                         ggcgggATGCGAACCTGTGACCCCATCATTATGAGGGATAGGCTCGAACCAACTGAGTTACGTGGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCAtccgtacaacgctttctggtgaatggtgcgggaggcgagacttgaactcgcacaccttgcggcgccagaacctaaatctggtgcgtctaccaatttcgccactcccgcaaaaaaagatggtggctacgacgggattcgaacc                                                                                 <  2:191732‑M1/297‑143 (MQ=255)                                                                                                                                         gacgGGATTCGAACCTGTGACCCCATCGTTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCAtccgtacaacgctttctggtgaatggtgcgggagtcgagacttgaactcgcacaccttgcggcgccagaacctaaatctggggcgtctaccaatttcgccactcccgcaaaaaaagatggtggctacgacgggattcgaacc                                                                                 <  1:1018882‑M1/299‑143 (MQ=255)                                                                                                                                               aTTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAGATTGTTTCTTCGATGNCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCAtccgtacaacgctttctggtgaatggtgcgggaggcgagacttgaactcgcacaccttgcggcgccagaacctaaatctggtgcgtctaccaatttcgccactcccgcaaaaaaagatggtggctacgacgggattcgaacctgtgacc                                                                          <  1:770018‑M1/300‑150 (MQ=255)                                                                                                                                               aTTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCAtccgtacaacgctttctggtgaatggtgcgggaggcgagacttgaactcgcacaccttgcggcgccagaacctaaatctggtgcgtctaccaatttcgccactcccgcaaaaaaagatggtggctacgacgggattcgaacctgtgacc                                                                          >  1:598646‑M1/1‑151 (MQ=255)                                                                                                                                               aTTCGAACCTGTGACCCCATCATTAGGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCAtccgtacaacgctttctggtgaatggtgcggtaggctagacttgaactcgcacaccttgcggcgccagaacctaaatctggtgcgtctaccaatttcgccactcccgcaaaaaaagatggtggctacgacgggattcgaacctgtgacc                                                                          <  1:572896‑M1/300‑150 (MQ=255)                                                                                                                                                   gAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCCTACCGCTTGGCGATACCCCAtccgtacaacgctttctggtgaatggtgcgggaggcgagacttgaactcgcacaccttgcggcgccagaacctaaatctggtgcgtctaccaatttcgccactcccgcaaaaaaagatggtggctacgacgggattcgaacctgtgacc                                                                          <  1:408990‑M1/296‑150 (MQ=255)                                                                                                                                                      ccTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCAtccgtacaacgctttctggtgaatggtgcgggaggcgagacttgaactcgcacaccttgcggcgccagaacctaaatctggtgcgtctaccaatttcgccactcccgcaaagaaagatggtggctacgacgagattcgaacctgtgaccccatcat                                                                   >  2:924025‑M1/1‑144 (MQ=255)                                                                                                                                                      ccTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCAtccgtacaacgctttctggtgaatggtgcgggaggcgagacttgaactcgcacaccttgcggcgccagaacctaaatctggtgcgtctaccaatttcgccactcccgcaaaaaaagatggtggctacgacgggattcgaacctgtgaccaaatcat                                                                   >  2:699250‑M1/1‑144 (MQ=255)                                                                                                                                                         gtgACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCAtccgtacaacgctttctggtgaatggtgcgggaggcgagacttgaactcgcacaccttgcggcgccagaacctaaatctggtgcgtctaccaatttcgccactcccgcaaaaaaagatggtggctacgacgggattcgaacctgtgaccccatcattat                                                                >  1:612915‑M1/1‑141 (MQ=255)                                                                                                                                                                 atcatTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCAtccgtacaacgctttctggtgaatggtgcgggaggcgagacttgaactcgcacaccttgcggcgccagaacctaaatctggtgcgtctaccaatttcgccactcccgcaaaaaaagatggtggctacgacgggattcgaacctgtgaccccatcattatgagtgat                                                         >  1:967565‑M1/1‑133 (MQ=255)                                                                                                                                                                 atcatTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAGATTGTTTCTGCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCAtccgtacaacgctttctggtgaatggtgcggtaggcgagacttgaactcgcacaccttgcggcgccagaacctaaatctggtgcgtctaccaatttcgccactcccgcaaaaaaagatggtggctacgacgggattcgaacctgtgaccccatcattatgagt                                                            <  2:860383‑M1/296‑164 (MQ=255)                                                                                                                                                                   catTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCAtccgtacaacgctttctggtgaatggtgcgggaggcgagacttgaactcgcacaccttgcggcgccagaacctaaatctggtgcgtctaccaatttcgccactcccgcaaaaaa                                                                                                             >  2:127658‑M1/1‑131 (MQ=255)                                                                                                                                                                    agtattattggtgtgctctaactaacGGGGCTACGTAGTCAGAGTGTTGCTTCGATGGCTGGGGTACCTGTATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCAtccgtacaacgctttctggtgaatggtgctggaggcgagacttgaattcgcacaccttgctgcgccagaacctaaatctggtgcgtctaccaatttcgccactcccgcaaaaaaagatggtggctacgacgggattcgaacctgtgaccccatcattatgagtgatgtgc                                                     <  2:58141‑M1/289‑171 (MQ=255)                                                                                                                                                                      tATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCAtccgtacaacgctttctggtgaatggtgcgggaggcgagacttgaactcgcacaccttgcggcgccagaacctaaatctggtgcgtctaccaatttcgccactcccgcaaaaaaagatggtggctacgacgggattcgaacctgtgaccccatcattatgagtgatgtgctc                                                   <  1:413689‑M1/300‑173 (MQ=255)                                                                                                                                                                           gTGATGTGCTCTAACCAACTGAGCTACGTAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCAtccgtacaacgctttctggtgaatggtgcgggaggcgagacttgaactcgcacaccttgcggcgccagaacctaaatctggtgcgtctaccaatttcgccactcccgcaaaaaaagatggtggctacgacgggattcgaacctgtgaccccatcattatgagtgatgtgctctaacc                                              >  1:252225‑M1/1‑123 (MQ=255)                                                                                                                                                                                  gCTCTAACCAACTGAGCTACGTAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCAtccgtacaacgctttctggtgaatggtgcgggaggcgagacttgaactcgcacaccttgcggcgccagaacctaaatctggtgcgtctaccaatttcgccactcccgcaaaaaaagatggtggctacgacgggattcgaacctgtgaccccatcattatgagtgatgtgctctaaccaactga                                        >  1:97535‑M1/1‑116 (MQ=255)                                                                                                                                                                                  gCTCTAACCAACTGAGCTACGTAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCAtccgtacaacgctttctggtgaatggtgcgggaggcgagacttgaactcgcacaccttgcggcgccagaacctaaatctggtgcgtctaccaatttcgccactcccgcaaaaaaagatggtggctacgaagggattcgaacctgtgaccccatcattatgagtgatgtgctctaaccaactga                                        >  1:528758‑M1/1‑116 (MQ=255)                                                                                                                                                                                  gCTCTAACCAACTGAGCTACGTAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCAtccgtacaacgctttctggtgaatggtgcgggaggcgagacttgaactcgcacaccttgcggcgccagaacctaaatctggtgcgtctaccaatttcgcaactcccgcaaaaaaagatggtggctacgacggggttcgaacctgtgaccccatcattatgagtgatgtgctctaacaaactga                                        >  2:282447‑M1/1‑116 (MQ=255)                                                                                                                                                                                   ctctAAACAACTGAGCTACGTAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCAtccgtacaacgctttctggtgaatggtgcgggaggcgagacttgaactcgcacaccttgcggcgccagaacctaaatctggtgcgtctaccaatttcgccactcccgcaaaaaaagatggtggctacgacgggattcgaacctgtgaccccatcattatgagtgatgtgctctaaccaactgagc                                      >  1:295365‑M1/1‑115 (MQ=255)                                                                                                                                                                                     ctAACCAACTGAGCTACGTAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAACAACCGGTGCCTTACCGCTTGGCGATACCCCAtccgtacaacgctttctggtgaatggtgcgggaggcgagacttgaactcgcacaccttgcggcgccagaacctaaatctagtgcgtctaccaatttcgccactcccgcaaaaaaagctggcggctacgacgagattcgaacctgtgaccccctcactatgagtgatgtgctctaaacaactgagcta                                    >  2:698201‑M1/1‑113 (MQ=255)                                                                                                                                                                                        aCCAACTGAGCTACGTAGCCAGATTGTTTCTTCGATTGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCAtccgtacaacgctttctggtgaatggtgcgggaggcgagacttgaactcgcacaccttgctgcgccagaacctaaatctggtgcgtctaccaatttcgccactcccgcaaaaaaagatggtggctacgacgggattcgaacctgtgaccccatcattatgagtgatgtgctctaaccaactgagctacgt                                 <  2:672736‑M1/300‑191 (MQ=255)                                                                                                                                                                                                aGCTACGTAGCTAGATTGTTTCTGCGATGGCTGGGGTACTTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCAtccgt                                                                                                                                                                                                                          <  2:483966‑M1/107‑6 (MQ=255)                                                                                                                                                                                                aGCTACGTAGCCAGAGTGTTTCTGCGATGGCTGGGGTACCTGGATTCGAACCATGGAATGCCGGTATCAAAAGCCGGTGCCTTACCGCTTGGCGATACCCCAtccgtacaacgctttctggtgaatggtgcgggaggcgagacttgagctcgcacacct                                                                                                                                                                      <  2:308561‑M1/159‑58 (MQ=255)                                                                                                                                                                                                 gCTACGTAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCAtccgtacaacgctttctggtgaatggtgcgggaggcgagacttgaactcgcacaccttgcggcgccagaacctaaatctggtgcgtctaccaatttcgccactcccgcaaaaaaagatggtggctacgacgggattcgaacctgtgaccccatcattatgagtgatgtgctctaaccaactgagctacgtagccatctt                        >  1:936607‑M1/1‑101 (MQ=255)                                                                                                                                                                                                       tAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCC‑GTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCAtccgtacaacgctttctggtgaatggtgcgggaggcgagacttgaactcgcacaccttgcggcgccagaacctaaatctggtgcgtctaccaatttcgccactcccgcaaaaaaagatggtggctacgacgggattcgaacctgtgaccccatcattatgagtgatgtgctctaaccaactgagctacgtagcaatcttttttttc                 >  1:625543‑M1/1‑94 (MQ=255)                                                                                                                                                                                                              agtgtttcgccgatggctgggGGACCTGGATTCGAACCAGGGAATGCCGGGATCAAAAACCGGTGCCGTACCACTTGGCGATACCCCAtccgtacaacgctttctggtgaatggtgcgggaggcgagacttgaactcgcacaccttgtggcgccagaacctaaatctggtgcgtctaccaatttcgccactcccgcaaaaaaagatggtggctacgacgggattcgaacctgtgaccccatcattatgag                                                             <  2:845463‑M1/240‑163 (MQ=255)                                                                                                                                                                                                                       tcGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCAtccgtacaacgctttctggtgaatggtgcgggaggcgagacttgaactcgcacaccttgcggcgccagaacctaaatctggtgcgtctaccaatttcgccactcccgcaaaaaaagatggtggctacgacgggattcgaacctgtgaccccatcattatgagtgatgtgctctaaccaactgagctacgtagccatcttttttttcgcgataccttatcgg  <  2:967565‑M1/300‑222 (MQ=255)                                                                                                                                                                                                                                                                                                     |                                                                                                                                                                                                                              AAATTGGCTGGGGTACGAGGATTCGAACCTCGGAATGCCGGAATCAGAATCCGGTGCCTTACCGCTTGGCGATACCCCAACAAATTGGTTTTGAATTTGCCGAACATATTCGATACATTCAGAATTTGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCAATAACCGGGCGGTGAACCGCTTACTCGAAGAAGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCATCCGTACAACGCTTTCTGGTGAATGGTGCGGGAGGCGAGACTTGAACTCGCACACCTTGCGGCGCCAGAACCTAAATCTGGTGCGTCTACCAATTTCGCCACTCCCGCAAAA  >  NC_000913/696538‑697051

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑