| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,061,935 | G→A | S46N (AGC→AAC) | torD → | trimethylamine‑N‑oxide reductase‑specific chaperone |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,061,935 | 0 | G | A | 96.7% | 193.8 / ‑6.6 | 61 | S46N (AGC→AAC) | torD | trimethylamine‑N‑oxide reductase‑specific chaperone |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base A (34/25); minor base C (2/0); total (36/25) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.08e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TCGACATCGGTACATCGCAGCTGGCGCAGGCGACCAGTGCGCACACTACGCTGGTGGAAAT‑TGAGAAGTACAACGGAACAGTGGAGCAGGTGACGGCGTTTAACGGCCCCGTGGAGATGGTGGCGCAGTGCGAATATGTTCCCGCGTCGCAGGTGAAATCATGACCACGCTGACAGCACAACAGATTGCCTGTGTTTACGCCTGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAGCG‑AACCG‑CC‑GCTCACTGCGGCGGTGAA‑CGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTACAAACAGGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCAGGGATGGAAACCAGCGGCAATTTCAACGAACCGGCAGATCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGC > NC_000913/1061639‑1062207 | gcGACATCGGTACATCGCAGCGGGCGCAGGCGACCAGTGCGCACACTACGCTGGTGGAAAT‑TGAGAAGTACAACTGAACAGTGGAGCAGGTGACGGCGTTTAACGGCCCCGTGGAGATGGTGGCGCAGTGCGAATATGTCCCCGCGTCGCAGGTGAAACCATGACCACGCTGACAGCACAACAGATTGCCTGTGTTTACGCCTGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAACG‑a < 2:208859/299‑1 (MQ=255) cGGTACATCGCAGCTGGCGCAGGCGACCAGTGCGCACACTACGCTGGTGGAAAT‑TGAGAAGTACAACGGAACAGTGGAGCAGGTGACGGCGTTTAACGGCCCCGTGGAGATGGTGGCGCAGTGCGAATATGTTCCCGCGTCGCAGGTGAAATCATGACCACGCTGACAGCACAACAGATTGCCTGTGTTTACGCCTGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAACG‑AAccg‑cc > 1:519945/1‑299 (MQ=255) gTACATCGCAGCTGGCGCAGCCGACCAGTGCGCACACTACGCTGGTGGAAAT‑TGAGAAGTACAACGGAACAGTGGAGCAGGTGACGGCGTTTAACGGCCCCGTGGAGATGGTGGCGCAGTGCGAATATGTTCCCGCGTCGCAGGTGAAATCATGACCACGCTGACAGCACAACAGATTGCCTGTGTTTACGCCTGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAACG‑AACCG‑CC‑GCt > 1:232017/1‑300 (MQ=255) gTGCGCACACTACGCTGGTGGAAAT‑TGAGAAGTACAACGGAACAGTGGAGCAGGTGACGGCGTTTAACGGCCCCGTGGAGATGGTGGCGCAGTGCGAATATGTTCCCGCGTCGCAGGTGAAATCATGACCACGCTGACAGCACAACAGATTGCCTGTGTTTACGCCTGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAACG‑AACCG‑CC‑GCTCACTGCGGCGGTGAA‑CGAGCTGGaaaa > 2:377070/1‑300 (MQ=255) gTGCGCACACTAAGCTGGTGGAAAT‑TGAGAAGTACAACGGAACAGTGGAGCAGGTGACGGCGTTTAACGGCCCCGTGGAGATGGTGGCGCAGTGCGAATATGTTCCCGCGTCGCAGGTGAAATCATGACCACGCTGACAGCACAACAGATTGCCTGTGTTTACGCCTGGCTAGCGCAGTTGTTCTCACGTGAGCTGGACGATGAACAACTGACGCAAATCGACAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAACG‑AACCG‑CA‑GCTCACTGCGGCGGTGAA‑CGAGCTGGaaaa > 2:229366/1‑300 (MQ=255) cacTACGCTGGTGGAAAT‑TGAGAAGTACAACGGAACAGTGGAGCAGGTGACGGCGTTTAACGGCCCCGTGGAGATGGTGGCGCAGTGCGAATATGTTCCCGCGTCGCAGGTGAAATCATGACCAAGCTGACAGCACAAAAGATTGCCTGTGTTTACGCCTGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGACAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAACG‑AACCG‑CC‑GCTCACTGCGGCGGTGCA‑CGAGCTGGACAACCGTact > 2:83866/1‑298 (MQ=255) cacTACGCTGGTGGAAAT‑TGAGAAGTACAACGGAACAGTGGAGCAGGTGACGGCGTTTAACGGCCCCGTGGAGATGGTGGCGCAGTGCGAATATGTTCCCGCGTCGCAGATGAAATCATGACCACGCTGACAGCACAACAGATTGCCTGTGTTTACGCCTGGCTAGCGCAGTTGTCCTCCCGTGAGCTGGAAGATGAACAACTGACGCAAATCGAAAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAACG‑AACCG‑CG‑GCTCACTGCGGCGGTGGA‑CGAGCTGGAAAAACGTAtt > 2:84116/1‑300 (MQ=255) cTACGCTGGTGGAAATNTGAGAAGTACAACGGAACAGTGGAGCAGGTGACGGCGTTTAACGGCCCCGTGGAGATGGTGGCGCAGTGCGAATATGTTCCCGCGTCGCAGGTGAAATCATGACCACGCTGACAGCACAACAGATTGCCTGTGTTTACGCCTGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAACGCAACCGACN‑GCTCACTGCGGCGGTGAANCGAGCTGGAAAAcca > 1:485992/1‑297 (MQ=255) cTACGCTGGTGGAAATNTGAGAAGTACAACGGAACAGTGGAGCAGGTGACGGCGTTTAACGGCACCGTGGAGATGGTGGCGCAGTGCGAATATGTTCCCGCGTCGCAGGTGAAATCATGACCACGCTGACAGCACAACAGATTGCCTGTGTTTACGCCTGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGACAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAACGCAACCG‑CCNGCTCACTGCGGCGGTGAANCGAGCTGGaaa > 1:486025/1‑294 (MQ=255) tACGCTGGTGGAAAT‑GTAGAAGTACAACGGAACAGTGGAGCAGGTGACGGCGTTTAACGGCCCCGTGGAGATGGTGGCGCAGTGCGAATATGTTCCCGCGGCGCAGTTGAAATCATGACCACGCCGACAGCACAACAGATTGCCTGTGTTTACGCCTGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATTGCTGAATGGTTTTCGTTGCTTAAAAACG‑AACCG‑CC‑GCTCACTGCGGCGGTGAA‑CGAGCTGGAAAACCGTATTGc < 2:263826/299‑1 (MQ=255) ggtggAAAT‑TGAGAAGTACAACGGAACAGTGGAGCAGGTGACGGCGTTTAACGGCCCCGTGGAGATGGTGGCGCAGTGCGAATATGTTCCCGCGTCGCAGGTGAAATCATGACCACGCTGACAGCACAACAGATTGCCTGTGTTTACGCCTGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAACG‑AACCG‑CC‑GCTCACTGCGGCGGTGAA‑CGAGCTGGAAAACCGTATTGCCACGCTg < 1:38200/300‑1 (MQ=255) t‑tGAGAAGTACAACGGAACAGTGGAGCAGGTGACGGCGTTTAACGGCCCCGTGTAGATGGTGGCGCAGTGCGAATATGTTCCCGCGTCGCAGGTGAAATCATGACCACGCTGACAGCACAACAGATTGCCTGTGTTTACGCCTGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAACG‑AACCG‑CC‑GCTCACTGCGGCGGTGAA‑CGAGCTGGAAAACCGTATTGCCACGCTGACAGTACg < 1:344582/300‑1 (MQ=255) tGAGAAGTACAACGGAACAGTGGAGCAGGTGACGGCGTTTAACGGCCCCGTGGAGATGGTGGCGCAGTGCGAATATGTTCCCGCGTCGCAGGTGAAATCATGACCACGCTGACAGCACAACAGATTGCCTGTGTTTACGCCTGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAACG‑AACCG‑CC‑GCTCACTGCGGCGGTGAA‑CGAGCTGGAAAACCGTATTGCCACGCTGACAGTACg < 1:560003/299‑1 (MQ=255) gaAGTACAACGGAACAGTGGAGCAGGTGACGGCGTTTAACGGCCCCGTGTAGATGGTGGCGCAGTGCGAATATGTTCCCGCGTCGCAGGTGAAATCATGACCACGCTGACAGCACAACAGATTGCCTGTGTTTACGCCTGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAACG‑AACCG‑CC‑GCTCACTGCGGCGGTGAA‑CGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGAc < 1:306196/300‑1 (MQ=255) gaAGTACAACGGAACAGTGGAGCAGGTGACGGCGTTTAACGGCCCCGTGGAGATGGTGGCGCAGTGCGAATATGTTCCCGCGTCGCAGGTGAAATCATGACCACGCTGACAGCACAACAGATTGCCTGTGTTTACGCCTGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAACG‑AACCG‑CC‑GCTCACTGCGGCGGTGAA‑CGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGAc < 1:306404/300‑1 (MQ=255) gTACAACGGAACAGTGGAGCAGGTGACGGCGTTTAACGGCCCCGTGGAGATGGTGGCGCAGTGCGAATATGTTCCCGCGTCGCAGGTGAAATCATGACCACGNTGACAGCACAACAGATTGCCTGTGTTTACGCCNGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAACG‑AACCG‑CC‑GCTCACTGCGGCGGTGAA‑CGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGAt > 2:438939/1‑300 (MQ=255) cAACGGAACAGTGGAGCAGGTGACGGCGTTTAACGGCCCCGTGGAGATGGTGGCGCAGTGCGAATATGTTCCCGCGTCGCAGGTGAAATCATGACCACGCTGACAGCACAACAGATTGCCTGTGTTTACGCCTGGCTAGCGCAGTTGTTCTCACGTGAGTTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAACG‑AACCG‑CA‑GCTCACTGCGGCGGTGAA‑CGAGTTGGAAAAACGTATTGCCACGCTGACCGCACGTGACGATGcc > 2:266846/1‑300 (MQ=255) cGGAACAGTGGAGCAGGTGACGGCGTTTAACGGCCCCGTGGAGATGGTGGCGCAGTGCGAATATGTTCCCGCGTCGCAGGTGAAATCATGACCACGCTGACAGCACAACAGATTGCCTGTGTTTACGCCTGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAACG‑AACCG‑CC‑GCTCACTGCGGCGGTGAA‑CGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGt > 2:529490/1‑300 (MQ=255) gAACAGTGGAGCAGGTGACGGCGTTTAACGGCCCCGTGGAGATGGTGGCGCAGTGCGAATATGTTCCCGCGTCGCAGGTGAAATCATGACCACGCTGACAGCACAACAGATTGCCTGTGTTTACGCCTGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGACAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAACG‑AACCG‑CC‑GCTCACTGCGGCGGTGAA‑CGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCt > 1:152421/1‑300 (MQ=255) aCAGTGGAGCAGGTGACGGCGTTTAACGGCCCCGTGGAGATGGTGGCGCAGTGCGAATATGTTCCCGCGTCGCAGGTGAAATCATGACCACGCTGACAGCACAACAGATTGCCTGTGTTTACGCCTGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAACG‑AACCG‑CC‑GCTCACTGCGGCGGTGAA‑CGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCt > 2:577683/1‑298 (MQ=255) cAGTGGAGCAGGTGACGGCGTTTAACGGCCCCGTGGAGATGGTGGCGCAGTGCGAATATGTTCCCGCGTCGCAGGTGAAATCATGACCACGCTGACAGCACAACAGATTGCCTGTGTTTACGCCTGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAACG‑AACCG‑CC‑GCTCACTGCGGCGGTGAA‑CGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGCTGCCCGTCTGGa > 1:183467/1‑300 (MQ=255) gTGGAGCAGGTGACGGCGTTTAACGGCCCCGTGGAGATGGTGGCGCAGTGCGAATATGTTCCCGCGTCGCAGGTGAAATCATGACCACGCTGACAGCACAACAGATTGCCTGTGTTTACGCCTGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAACG‑AACCG‑CC‑GCTCACTGCGGCGGTGAA‑CGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAAc < 1:278106/300‑1 (MQ=255) ttAACGGCCCCGTGGAGATGGTGGCGCAGTGCGAATATGTTCCCGCGTCGCAGGTGAAATCATGACCACGCTGACAGCNCAACAGATTGCCTGTGTTTACGCCTGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAACG‑AACCG‑CC‑GCTCACTGCGGCGGTGAA‑CGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCgg < 1:429012/300‑1 (MQ=255) gCCCCGTGGAGATGGTGGCGCAGTGCGAATATGTTCCCGCGTCGCAGGTGAAATCATGACCACGCTGACAGCACAACAGATTGCCTGTGTTTCCGCCTGGCTAGCGCAGTTGTTCTCCCGTGGGCTGGACGATGAACAACTGACGCAAATCGCAAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAACG‑AACCG‑CC‑GCTCACTGCGGCGGTGAA‑CGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCACGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGtt > 2:161354/1‑300 (MQ=255) cccGTGGAGATGGTGGCGCAGTGCGAATATGTTCCCGCGTCGCAGGTGAAATCATGACCACGCTGACAGCACAACAGATTGCCTGTGTTTACGCCTGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATTGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAACG‑AACCG‑CC‑GCTCAATGCGGCGGTGAA‑CGAGCTGGAAAACCGTATTGCCACGCTGACAGTATGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTc > 2:344122/1‑300 (MQ=255) cGTGGAGATGGTGGCGCAGTGCGAATATGTTCCCGCGTCGCAGGTGAAATCATGACCACGCTGACAGCACAACAGATTGCCTGTGTTTACGCCTGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAACG‑AACCG‑CC‑GCTCACTGCGGCGGTGAA‑CGAGCTGGAAAACCGTATTGCAACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCt > 2:561088/1‑299 (MQ=255) tGGAGATAGTGGCGCAGTGCTAATACGTTCCCGCGTCGCAGGGGAAATCACGACCACGCTGACAGCACAACAGATTGCCTGTGTTTACGCCTGGCTAGCGCAGTTGTTCTCCCGTGAGCTGTACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGTTGAAAAACG‑AACCG‑CC‑GCTCACTGCGGCGGTGAA‑CGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCtgat < 2:277935/300‑1 (MQ=255) gtggCGCAGTGCGAATATGTTCCCGCGTCGCAGGTGAAATCATGACCACGCTGACAGCACAACAGATTGCCTGTGTTTACGCCTGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAAGCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAACG‑AACCG‑CC‑GCTCACTGCGGCGGTGAA‑CGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCAGCGGACTTTTGCGGCCTGTTTCTGATGACCGaca > 2:397441/1‑300 (MQ=255) tctGTTCCCGCGTCGCAGGTGAAATCATGACCACGCTGACAGCACAACAGATTGCATGTGTTTACGCCTGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGACAGTGCGCAGAGGGCTGAATGGTTTTCGTTGCTGAAAAACG‑AACCG‑CC‑GCTCACTGCGGCGGTGAA‑CGAGCTGGAAAACCGTATTGCCACGCTGAAAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGc > 2:88857/3‑300 (MQ=255) tatGTTCCCGCGTCGCAGGTGAAGTCATGACCACGCTGCCAGCACAACAGATTGCCTGTGTTTACGCCTGGCTAGCGCAGTTGTTCTCACGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAACCG‑AACCG‑CC‑GCTCACTGCGGCGGTGAA‑CGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGCCTTTTGCGTCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGc > 2:88965/1‑300 (MQ=255) gcgTCGCAGGTGAAATCATGACCACGCTGACAGCACAACAGATTGCCTGTGTTTACGCCTGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAACG‑AACCG‑CC‑GCTCACTGCGGCGGTGAA‑CGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGc < 2:553823/298‑1 (MQ=255) ggTGAAATCATGACCACGCTGACAGCACAACAGATTGCCTGTGTTTACGCCTGGCTAGCGCAGTTGTTCTCACGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAACG‑AACCG‑CC‑GCTCACTGCGGCGGTGAA‑CGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGTGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTAc > 2:14862/1‑300 (MQ=255) tGAAATCATGACCACGCTGACAGCACAACAGATTGCCTGTGTTTACGCCTGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAACG‑AACCG‑CC‑GCTCACTGCGGCGGTGAA‑CGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTACaa < 1:34158/300‑1 (MQ=255) gAAATCATGACCACGCTGACAGCACAACAGATTGCCTGTGTTTACGCCTGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAACG‑AACCG‑CC‑GCTCACTGCGGCGGTGAA‑CGAGCTGGAAAACCGTATTGCCACGCTGACAGTACTTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTACaa < 1:35071/299‑1 (MQ=255) aaTCATGACCACGCCGACAGCACAACAGATTGCCTGTGTTTACGCCTGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACACAAATCGCAAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGCAAACCG‑AACCG‑CC‑GCTCACTGCGGCGGTGAA‑CGAGCTGGAAAACCGTATCGCCACACTGACAGTACGTGACGATGTACGTCTGGAACCGACCGCGGGCTTTTGCGGCTTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTACAAACa > 2:259751/1‑300 (MQ=255) aCGCTGACAGCACAACAGATTGCCTGTGTTTACGCCTGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAACG‑AACCG‑CC‑GCTCACTGCGGCGGTGAA‑CGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTACAAACAGGACGAGCa < 2:5531/299‑1 (MQ=255) gCTGACGGCACAACAGACTGCCTGTGTTTACGCCTGGCTAGCGCAGTTGTTCTCCCATGAGCTGTACGATGAACAACTTACGCAAATCGCCAGTGCGCAGATTGCTGAATGGTTTTCGTTGCTGAAAAACG‑AACCG‑CC‑GCTCACTGCGGCGGTGAA‑CGAGCTGGAAAACCGTATTGCCACGCTGACAGTGCGTGACGATGCCCTTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTACAAACAGGACGAGCa < 2:5948/297‑1 (MQ=255) ctgccAGCACAACAGATTGCCTGTGTTTACGCCTGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAACG‑AACCG‑CC‑GCTCACTGCGGCGGTGAA‑CGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCAGCGGACTTTTGCGGCCTGTTTCTGATGACAGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTACAAACAGGACGAGCAaga > 2:560415/5‑299 (MQ=255) tGACAGCACAACAGATTGCCTGTGTTTACGCCTGGCTAGCGCAGTTGTTCTCCCTTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAACG‑AACCG‑CC‑GCTCACTGCGGCGGTGAA‑CGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCTGCGCTGCCGTATGCATCGGCCTACAAACAGGACGAGCAagag < 2:299950/299‑1 (MQ=255) tGACAGCACAACAGATTGCCTGTGTTGACTCCTGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAACG‑AACCG‑CC‑GCTCACTGCGGCGGTGAA‑CGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTACAAACAGGACGAGCAagag < 2:574571/299‑1 (MQ=255) acaacaGATTGCCTGTGTTTACGCCTGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAACG‑AACCG‑CC‑GCTCACTGCGGCGGTGAA‑CGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGAGGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTACAAACAGGACGAGCAAGAGATTAAAc < 2:369511/299‑1 (MQ=255) tGCCTGTGTTTACGCCTGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAACG‑AACCG‑CC‑GCTCACTGCGGCGGTGAA‑CGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTACAAACAGGACGAGCAAGAGATTAAACGCTTGTTAGt < 1:38273/300‑1 (MQ=255) gtTTACGCCTGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAACG‑AACCG‑CC‑GCTCACTGCGGCGGTGAA‑CGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTACAAACAGGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCa > 2:366508/1‑300 (MQ=255) gcgcAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCACAGATGACTGAATGGTTTTCGTTGCTGAAAAACG‑AACCG‑CA‑GCTCACTGCGGCGGTGAA‑CGAGTTGGAAAACCGTATTGCCACGATGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGAATTTTGCGGCATGTTTCTGATGAACGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTACAAACAGGACGAGCAAGGGGTTAAACGCTTGTTAGtt > 2:305154/1‑279 (MQ=255) aGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAACG‑AACCG‑CC‑GCTCACTGCGGCGGTGAA‑CGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTACAAACAGGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCAGGGATGGAAACCAGCGGCa < 1:14862/300‑1 (MQ=255) gttCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAACG‑AACCG‑CC‑GCTCACTGCGGCGGTGAA‑CGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGTCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTACAAACAGGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCAGGGATGGAAACCAGCGGCAAttt > 1:254903/1‑300 (MQ=255) gttCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAACG‑AACCG‑CC‑GCTCACTGCGGCGGTGAA‑CGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTACAAACAGGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCAGGGATGGAAACCAGCGGCAAttt > 1:508668/1‑300 (MQ=255) gAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAACG‑AACCG‑CC‑GCTCACTGCGGCGGTGAA‑CGAGCTGGAAAACCGTATTGCCACGCTGACAGTACTTGACGATGCCCGTCTGGAACTTGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTAGGCATCTGCCTACAAACAGGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCATGGATGGAAACCAGCGGCAATTTCAAc < 2:67512/294‑1 (MQ=255) gAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAACG‑AACCG‑CC‑GCTCACTGCGGCGGTGAA‑CGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTACAAACAGGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCAGGGATGGAAACCAGCGGCAATTTCAAAGAAcc > 1:470805/1‑299 (MQ=255) aCGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAACG‑AACCG‑CC‑GCTCACTGCGGCGGTGAA‑CGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTACAAACAGGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCAGGGATGGAAACCAGCGGCAATTTCAACGAACCGGCAGatc < 1:402619/300‑1 (MQ=255) aTGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAACG‑AACCG‑CC‑GCTCACTGCGGCGGTGAA‑CGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTACAAACAGGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCAGGGATGGAAACCAGCGGCAATTTCACCGAACCGGCAGatcat > 2:529407/1‑299 (MQ=255) aTGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAACG‑AACCG‑CC‑GCTCACTGCGGCGGTGAA‑CGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTACAAACAGGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCAGGGATGGAAAACAGAGGCAACTTCAAAGAACCGGCGGatcgtc > 2:137401/1‑297 (MQ=255) aTGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAACG‑AACCG‑CC‑GCTCACTGCGGCGGTGAA‑CGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGACTGTTTATGATGACCGAAAAACAAGCGGCGCTGCCGTATGCATCGGCCTACAAACAGGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCAGGGATGGAAACCAGCGGCAATTTCAACGAACTGGTAGat > 2:87739/1‑296 (MQ=255) aTGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAACG‑AACCG‑CC‑GCTCACTGCGGCGGTGAA‑CGAGCTGGAAAACCGCATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCATACAAACAGGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCAGGGATGGAAACCAGCGGCAATTTCAACGAACCGGCAGatcatc > 2:396381/1‑300 (MQ=255) aaaTCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAACG‑AACCG‑CC‑GCTCACTGCGGCGGTGAA‑CGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTACAAACAGGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCAGGGATGGAAACCAGCGGCAATTTCAACGAACAGGCAGATCATCTGGCGATCTAtctc < 1:370305/299‑1 (MQ=255) tCGCCAGTGCGCAGGTGGCTGAATGGTTTTCGTTGCTGAAAAACG‑AACCG‑CC‑GCTCACTGCGGCGGTGAA‑CGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTACAAACAGGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCAGGGATGGAAACCAGCGGCAATTTCAACGAACCGGCAGATCATCTGGCGATCTATCTCGAAt < 2:354371/300‑1 (MQ=255) gTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAACG‑AACCG‑CC‑GCTCACTGCGGCGGTGAA‑CGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTACAAACAGGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCAGGGATGGAAACCAGCGGCAATTTCAACGAACCGGCAGATAATTTGGCGATCTATCTAGAATTGCTCa > 2:2363/1‑300 (MQ=255) gTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAACG‑AACCG‑CC‑GCTCACTGCGGCGGTGAA‑CGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTACAAACAGGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCAGGGATGGAAAACAGCGGCAATTTCAACGAACCGGCAGATCATCTGGCGATCTATCTCGAATTGCTc > 2:525800/1‑299 (MQ=255) gcgcAGATGGCTGAATGGTTTTCGTTGCTGAAAAACG‑AACCG‑CC‑GCTCACTGCGGCGGTGAA‑CGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTACAAACAGGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCAGGGATGGAAACCAGCGGCAATTTCAACGAACCGGCAGATCATCTGGCGATCTATCTCGAATTGCTCAGc > 1:287961/1‑300 (MQ=255) gcAGATGGCTGAATGGTTTTCGTTGCTGAAAAACG‑AACCG‑CC‑GCTCACTGCGGCGGTGAA‑CGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTACAAACAGGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCAGGGATGGAAACCAGCGGCAATTTCAACGAACCGGCAGATCATCTGGCGATCTATCTCGAATTGCTCAGCCa < 2:503500/300‑1 (MQ=255) tGGCTGAATGGTTTTCGTTGCTGAAAAACG‑AACCG‑CC‑GCTCACTGCGGCGGTGAA‑CGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTACAAACAGGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCAGGGATGGAAACCAGCGGCAATTTCAACGAACCGGCAGATCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGc > 1:547170/1‑300 (MQ=255) | TCGACATCGGTACATCGCAGCTGGCGCAGGCGACCAGTGCGCACACTACGCTGGTGGAAAT‑TGAGAAGTACAACGGAACAGTGGAGCAGGTGACGGCGTTTAACGGCCCCGTGGAGATGGTGGCGCAGTGCGAATATGTTCCCGCGTCGCAGGTGAAATCATGACCACGCTGACAGCACAACAGATTGCCTGTGTTTACGCCTGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAGCG‑AACCG‑CC‑GCTCACTGCGGCGGTGAA‑CGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTACAAACAGGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCAGGGATGGAAACCAGCGGCAATTTCAACGAACCGGCAGATCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGC > NC_000913/1061639‑1062207 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |