| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,901,209 | 0 | C | T | 23.9% | 94.7 / 10.8 | 46 | W126* (TGG→TAG) | yoaE | TerC family inner membrane protein YoaE |
| Reads supporting (aligned to +/- strand): ref base C (18/17); new base T (0/11); total (18/28) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.08e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
CTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGGGGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTACCGCCGCCATCATCACCGGCAGATGGTTAACCATCCCTACTGCAGTAATTACCGCATCCAACGAGAAGACGGCGTCAAGGATGAC‑AATCTGTGTGACGACCACCCAGAAACTGGCGTAGCCTTTACCGTGGCCGGAATCATGATCGCGGTTTTCCAGCCGTTC‑ATGCAGTTCGGTTGTTGCTTTGAACAGCAAGAATATCCCCCCGAACAACATAATCAGGTCGCGTCCGGAGAAGGAGAAATCCATGACGGTAAATAGCGGTTTGGTCAGCGTGACCATCCATGAAATCAGCGACAGCAGCCCCAGACGCATAATCAGCGCCAGTGATAACCCCAGCAAACGCGCTTTATCGCGTTGTTTTGGCGGCAGTTTGTCA > NC_000913/1900910‑1901481 | cTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGGGGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTACCGCCGCCATCATCACCGGCAGATGGTTAACCATCCCTACTGCAGTAATTACCGCATCCAACGAGAAGACGGCGTCAAGGATGAC‑AATCTGTGTGACGACCAccc > 1:145774/1‑300 (MQ=255) gaAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCATACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCTTGGGGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTACCTCCGCCATCATCACCTGCAGATGGTTAACCATCCCTACTTCAGTAATTACCGCATCCACCGAGAATACGTCGTCACCTATTAC‑AACCGATGTGACGACCACCTAGAAACTGGCGTAGcc < 2:52875/300‑1 (MQ=255) gaAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGGGGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTACCGCCGCCATCATCACCGGCAGATGGTTAACCATCCCTACTGCAGTAATTACCGCATCCAACGAGAAGACGGCGTCAAGTATGAC‑AACCGGTGTGACGACCACCTAGAAACTGGCGTAGcc < 2:52886/300‑1 (MQ=255) aaGCCAATCTCGGCATACAGGTAACCTTTCGGAATGTGGAAACCTAAACCTTCGTCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGGGGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTACCGCCGCCATCATCACCGGCAGATGGTTAACCATCCCTACTGCAGTAACTACCGCATCCAACTAGAAGACGGCTTCAAGGATTGT‑AAGTTGTGCGACGACCACCTAGAAACTGGCGTAGCCt < 2:289182/300‑1 (MQ=255) aaGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGGGGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTACCGCCGCCATCATCACCTGCAGATGGTTAACCATCCCTACTTCATTAATTACCACATCCAACTATAATACTGCCTCAACTATGGC‑AACCGGTGCGACGACCACCTAGAAACTGGCGTAGCCt < 2:504155/300‑1 (MQ=255) aTCGCTGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGGGGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTACCGCCGCCATCATCACCGGCAGATGGTTAACCATCCCTACTGCAGTAATTACCGCATCCAACTAGAAGACGACGTCAAGGATGAC‑AATCTATGTGACGACCACCTAGAAACTGGCGTAGCCTTTACCg < 2:538874/300‑1 (MQ=255) aTCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTTGGGTGCCGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTACCGCCGCCATCATCACCTGCAGATGGTTAACCATCCCTACTGCAGTAATTACCGCATCCAACTATAATACGGCGTCAAGGATGAT‑GAGTGGTGTGACGACCACCTAGAAACTGGCGTAGCCTTTACCg < 2:215995/300‑1 (MQ=255) tCGCGGCAGACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGGGGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTACCGCCGCCATCATCACCTGCAGATGGTTAACCATCCCTACCGCAGTAATTACCACACCCAACTATAAGACTGCTTCAATTATGGCGAAT‑GGTGCGACGACCACCTAGAAACTGGCGTAGCCTTTACCg < 2:216145/299‑1 (MQ=255) cAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGGGGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTACCGCCGCCACCATCACCGGCAGATGGTTAACCATCCCTACTGAAGTAATTACCGCATCCAACGAGAAGACGGCGTCAAGGATGGC‑AATCTGTGTGGCGACCACCCAGAAACTGGCGTAGCCTTTACCGTGGCCAGAATc > 2:570752/1‑300 (MQ=255) gtgGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGGGGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTACCGCCGCCATCATCACCGGCAGATGGTTAACCATCCCTACTGCAGTAATTACCGCATCCAACGAGAAGACGGCGTCAAGGATGAC‑AATCTGTGTGACGACCACCCAGAAACTGGCGTAGCCTTTACCGTGGCCGGAATCATGATCGCGGTTTTCCa > 1:513318/1‑299 (MQ=255) tgGAAACCGAAACCTTCTGCCACCAGGTTCAGACCAATTATTAGCAGGAAGCTCAGACAGAGCACCACCACCGTGGGGTGCTGTTTAACGAATCGCTTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTACCGCCGCCATTATCACCTGCAGATGGTTAACCATCTCTACTTCATTAATTACCACATCCAACTAGAAGACTGCGTCAATGGTGGT‑GAGTTGTGTGACGACCACCTAGAAACTGGCGTAGCCt < 2:504286/264‑1 (MQ=255) aaaccTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGGGGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTACCGCCGCCATCATCACCGGCAGATGGTTAACCATCCCTACTGCAGTAATTACCGCATCCAACGAGAAGACGGCGTCAAGGATGAC‑AATCTGTGTGACGACCACCCAGAAACTGGCGTAGCCTTTACCGTGGCCGGAATCATGATCGCGGTTTTCCAGCCGTTC‑ATGc < 1:366804/300‑1 (MQ=255) accaGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGGGGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCCATCACTACCGCCGCCATCATCAACGGCAGATTGTTAACCATCCCTCCTGCAGTAATTACCGCATCCAACGAGAAGACGGCGTCAAGGATGAC‑AATCTGTGTGACGACCACCCAGAAACTGGCGTAGCCTTTACCGTGGACGGAATCATGATCGCGGTTTTCCAGCCGTTC‑ATGCAGTTCGgttgtt > 1:275231/1‑300 (MQ=255) accaGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGGGGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTACCGCCGCCATCATCACCGGCAGATCGTTAACCATCCCTACTGCAGTAATTACCGCATCCAACGAGAAGACGGCGTCAAGGATGAC‑AATCTGTGTGACGACCACCCAGAAACTGGCGTAGCCTTTACCGTGGCCGGAATCATGATCGCGGTTTTCCAGCCGTTC‑ATGCAGTTCGgttgtt > 1:275232/1‑300 (MQ=255) aCTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGGGGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTACCGCCGCCATCATCACCGGCAGATGGTTAACCATCCCTACTGCAGTAATTACCGCATCCAACGAGAAGACGGCGTCAAGGATGAC‑AATCTGTGTGACGACCACCCAGAAACTGGCGTAGCCTTTACCGTGGCCGGAATCATGATCGCGGTTTTCCAGCCGTTC‑ATGCAGTTCGGTTGTTGCttt > 1:103995/1‑300 (MQ=255) aTCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGGGGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTACCGCCGCCATCATCAACGGCAGATGGTTAACCATCCCTACTGCAGTAATTACCGCATCCCACGAGAAGACGGCGTCAAGGATGAC‑AATCTGTGTGACGACCACCCGGAAAc > 2:495221/1‑217 (MQ=255) ggAAGCTCAGACAGAGCACCACCGCCGTGGGGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTACCGCCGCCATCATCACCGGCAGATGGTTAACCATCCCTACTGCAGTAATTACCGCATCCAACGAGAAGACTGCGTCAAGGATTAC‑AATCTGTGTGACGACCACCCAGAAACTGGCGTAGCCTTTACCGTGGCCGGAATCATGATCGCGGTTTTCCAGCCGTTC‑ATGCAGTTCGGTTGTTGCTTTGAACAGCAAGAATATccccc < 2:54811/300‑1 (MQ=255) aGCTCAGACAGAGCACCACCACCGTGGGGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTACCGCCGCCATCATCACCGGCAGATGGTTAACCATCCCTACTGCAGTAATTACCGCATCCAACGAGAAGACGGCGTCAAGGATGAC‑AATCTGTGTGACGACCACCCAGAAACTGGCGTAGCCTTTACCGTGGCCGGAATCATGATCGCGGTTTTCCAGCCGTTC‑ATGCAGTTCGGTTGTTGCTTTGAACAGCAAGAATATcccccaga > 1:230325/1‑297 (MQ=255) aGCTCAGACAGAGCACCACCACCGTGGGGTGCTGGTTAACGAATCGCGTCAACGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTACCGCCGCCATCATCAACGGCAGATGGTTAACCATCCCTAATGCAGTAATTACCGCATCCAACGAGAAGACGACGCCAAGGATGAC‑AATCTGTGTGACGAACACCCAGAAACTGGCGTAGCCtccccca > 2:285568/1‑215 (MQ=255) agCACCACCACCGTGGGGTGCTGGTTAACGAATCGCTTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTACCGCCGCCNTCATCACCGGCAGATGGTTAACCATCCCTACTGCAGTAATTACCGCATCCAACGAGAAGACGGCGTCAAGGATGAC‑AATCTGTGTGACGACCACCTAGAAACTGGCGTAGCCTTTACCGTGGCCGGAATCATGATCGCGGTTTTCCAGCCGTTC‑ATGCAGTTCGGTTGTTGCTTTGAACAGCAAGAATATCCCCCCGAACAACATAATc < 2:454683/300‑1 (MQ=255) agCACCACCACCGTGGGGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTACCGCCGCCATCATCACCGGCAGATGGTTAACCATCCCTACTGCAGTAATTACCGCATCCAACGAGAAGACGGCGTCAAGGATGAC‑AATCTGTGTGACGACCACCCAGAAACTGGCGTAGCCTTTACCGTGGCCGGAATCATGATCGCGGTTTTCCAGCCGTTC‑ATGCAGTTCGGTTGTTGCTTTGAACAGCAAGAATATCCCCCCGAACAACATAATc < 1:169645/300‑1 (MQ=255) gCACCACCACCGTGGGGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTACCGCCGCCATCATCACCGGCAGATGGTTAACCATCCCTACTGCAGTAATTACCGCATCCAACTAGAAGACTGCTTCAATGATGAC‑AATCTATGTGACGACCACCCAGAAACTGGCGTAGCCTTTACCGTGGCCGGAATCATGATCGCGGTTTTCCAGCCGTTC‑ATGCAGTTCGGTTGTTGCTTTGAACAGCAAGAATATCCCCCCGAACAACATAATCa < 2:280055/300‑1 (MQ=255) accaccGTGGGGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTACCGCCGCCATCATCACCGGCAGATGGTTAACCATCCCTACTGCAGTAATTACCGCATCCAACTAGAAGACTGCGTCAAGGATGAC‑AATCTGTGTGACGACCACCCAGAAACTGGCGTAGCCTTTACCGTGGCCGGAATCATGATCGCGGTTTTCCAGCCGTTC‑ATGCAGTTCGGTTGTTGCTTTGAACAGCAAGAATATCCCCCCGAACAACATAATCAGGt < 2:341048/298‑1 (MQ=255) accGTGGGTTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTACCGCCGCCATCCTCACCGGCAGATGGTTAACCATCCATACTGCAGTAATTACCGCATCCAACGAGAAGACGGCGTCAAGGATGAC‑AATCTGTGTGACGACCACCCAGAAACTGGCGTAGCCTTTACCGCGGCCAGAATCACGACCTCGGCTCTCC‑GCCGTTCCTTGC‑GTTTGGTTGTTGCTTTGCACAGCAAGAACACCCCCACGAACAAaataataagtttgctcc > 2:238584/1‑289 (MQ=255) accGTGGGGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTACCGCCGCCATCATCACCGGCAGATGGTTAACCATCCCTACTGCAGTAATTACCGCATCCAACGAGAAGACGGCGTCAAGGATGAC‑AATCTGTGTGACGACCACCCAGAAACTGGCGTAGCCTTTACCGTGGCCGGAATCATGATCGCGGTTTTCCAGCCGTTC‑ATGCAGTTCGGTTGTTGCTTTGAACAGCAAGAATATCCCCCCGAACAACATAATCAGGTCGCGt > 1:293362/1‑300 (MQ=255) gTGGGGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTACCGCCGCCATCATCACCGGCAGATGGTTAACCATCCCTACTGCAGTAATTACCGCATCCAACGAGAAGACGGCGTCAAGGATGAC‑AATCTGTGTGACGACCACCCAGAAACTGGCGTAGCCTTTACCGTGGCCGGAATCATGATCGCGGTTTTCCAGCCGTTC‑ATGCAGTTCGGTTGTTGCTTTGAACAGCAAGAATATCCACCCGAACAACATAATCAGGTCGCGTcc > 1:238559/1‑299 (MQ=255) gTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTACCGCCGCCATCATCACCGGCAGATGGTTAACCATCCCNACTGCAGTAATTACCGCATCCAACGAGAAGACNGCGTCAAGGATGAC‑AATCTGTGTGACGACCCCCCAGAAACTGGCGTAGCCTTTACCGTGGCCGGAATCCTGCTCGCGGTTTTCCAGCCGTTC‑ATGCAGTTCGGTTGTTGCTTTGAACAGCAGGAATATCCAAAAGAAAAAAATAATCAGGTCGAGTCCggagaa > 2:449955/1‑300 (MQ=255) tAACCGCCATCGCAATCACTACCGCCGCCATCATCACCGGCAGATGGTTAACCATCCCTACTGCAGTAATTACCGCATCCAACGAGAAGACGGCGTCAAGGATGAC‑AATCTGTGTGACGACCACCCAGAAACTGGCGTAGCCTTTACCGTGGCCGGAATCATGATCGCGGTTTTCCAGCCGTTC‑ATGCAGTTCGGTTGTTGCTTTGAACAGCAAGAATATCCCCCCGAACAACATAATCAGGTCGCGTCCGGAGAAGGAGAAATCCATGACGGTAAATAGCGGTTTGGTCAGCGTGAcca < 1:519012/300‑1 (MQ=255) aaCCGCCATCGCAATCACTACCGCCGCCATCATCACCGGCAGATGGTTAACCATCCCTACTGCAGTAATTACCGCATCCAACGAGAAGACTGCGTCAAGGATGAC‑AATCTGTGTGACGACCACCCAGAAACTGGCGTAGCCTTTACCGTGGCCGGAATCATGATCGCGGTTTTCCAGCCGTTC‑ATGCAGTTCGGTTGTTGCTTTGAACAGCAAGAATATCCCCCCGAACAACATAATCAGGTCGCGTCCGGAGAAGGAGAAATCCATGACGGTAAATAGCGGTTTGGTCAGCGTGAcca < 2:13905/299‑1 (MQ=255) ggCAGATGGTTAACCATCCCTACTGCAGTAATTACCGCATCCAACTAGAAGACGGCGTCAAGTATGAC‑AATCTGTGTGACGACCACCCAGAAACTGGCGTAGCCTTTACCGTGGCCGGAATCATGATCGCGGTTTTCCAGCCGTTC‑ATGCAGTTCGGTTGTTGCNTTGAACAGCAAGAATATCCCCCCGAACAACATAATCAGGTCGCGTCCGGAGAAGGAGAAATCCATGACGGTAAATAGCGGTTTGGTCAGCGTGACCATCCATGAAATCAGCGACAGCAGCCCCAGACGCATAATc < 2:431573/300‑1 (MQ=255) ggCAGATGGTTAACCATCCCTACTGCAGTAATTACCGCATCCAACGAGAAGACGGCGTCAAGGATGAC‑AATCTGTGTGACGACCACCCAGAAACTGGCGTAGCCTTTACCGTGGCCGGAATCATGATCGCGGTTTTCCAGCCGTTC‑ATGCAGTTCGGTTGTTGCTTTGAACAGCAAGAATATCCCCCCGAACAACATCATCAGGTCGCGTCCGGAGAAGGAGAAATCCATGACGGTAAATAGCGGTTTGGTCAGCGTGACCATCCATGAAATCAGCGACAGCAGCCCCAGACGCATAATc < 2:513318/300‑1 (MQ=255) gATGGTTAACCATCACTACTGCAGTAATTACCGCATCCAACGAGAAGACGGCGTCAAGGATGAC‑AATCTGTGTGACGACCACCCAGAAACTGGCGTAGCCTTTACCGTGGCCGGAATCATGATCGCGGTTTTCCAGCCGTTC‑ATGCAGTTCGGTTGTTGCTTTGAACAGCAAGAATATCCCCCCGAACAACATAATCAGGTCGCGTCCGGAGAAGGAGAAATCCATGACGGTAAATAGCGGTTTGGTCAGCGTGACCATCCATGAAATCAGCGACAGCAGCCCCAGACGCATAATAAgcg < 1:462121/300‑1 (MQ=255) tGGTTAACCATCCCTACTGCAGTAATTACCGCATCCAACGAGAAGACGGCGTCAAGGATGAC‑AATCTGTGTGACGACCACCCAGAAACTGGCGTAGCCTTTACCGTGGCCGGAATCATGATCGCGGTTTTCCAGCCGTTC‑ATGCAGTTCGGTTGTTGCTTTGAACAGCAAGAATATCCCCCCGAACAACATAATCAGGTCGCGTCCGGAGAAGGAGAAATCCATGACGGTAAATAGCGGTTTGGTCAGCGTGACCATCCATGAAATCAGCGACAGCAGCCCCAGACGCATAATCAGCGcc < 1:44081/300‑1 (MQ=255) aTCCCTACTGCAGTAATTACCGCATCCAACGAGAAGACTGCGTCAAGGATGAC‑AATCTGTGCGACGACCACCCAGAAACTGGCGTAGCCTTTACCGTTGCCGGAATCATGATCGCGGTTTTCCAGCCGTTC‑ATGCAGTTCGGTTGTTGCTTTGAACAGCAAGAATATCCCCCCGAACAACATAATCAGGTCGCGTCCGGAGAAGGAGAAATCCATGACGGTAAATAGCGGTTTGGTCAGCGTGACCATCCATGAAATCAGCGACAGCAGCCCCAGACGCATAATCAGCACCAGTGATAAc < 2:195648/300‑1 (MQ=255) tCCCTACTGCAGTAATTACCGCATCCAACGAGAAGACGGCGTCAAGGATGAC‑AATCTGTGTGACGACCACCCAGAAACTGGCGTAACCTCTAACACGGCCGGAATCATGATCGCGGTTTTCCAGCCGTTC‑ATGCAGTTCGGTTGTTGCTTTGGACAGCAAGAATATCCCCACGAAAAAGATAATAAGGTCGCGTCCGGAGAAGGAGAAATCCATGACGGTAAATAACGGTTTGGTCCGCGTGGCCATCCATGAAATTAGCAACAGCAGCCACAGACGCATAACCAGCGCCAGTGAtca > 2:491605/1‑296 (MQ=255) tACTGCAGTAATTACCGCATCCAACTAGAAGACGGCGTCAAGGATGAC‑AATCTGTGTGACGACCACCCAGAAACTGGCGTAGCCTTTACCGTGGCCGGAATCATGATCGCGGTTTTCCAGCCGTTC‑ATGCAGTTCGGTTGTTGCTTTGAACAGCAAGAATATCCCCCCGAACAACATAATCAGGTCGCGTCCGGAGAAGGAGAAATCCATGACGGTAAATAGCGGTTTGGTCAGCGTGACCATCCATGAAATCAGCGACAGCAGCCCCAGACGCATAATCAGCGCCAGTGATAAcc < 2:230325/296‑1 (MQ=255) tACTGCAGTAATTACCGCATCCAACGAGAAGACGGCGTCAAGGATGAC‑AATCTGTGTGACGACCACCCAGAAACTGGCGTAGCCTTTACCGTGGCCGGAATCATGATCGCGGTTTTCCAGCCGTTC‑ATGCAGTTCGGTTGTTGCTTTGAACAGCAAGAATATCCCCCCGAACAACATAATCAGGTCGCGTCCGGAGAAGGAGAAATCCATGACGGTAAATAGCGGTTTGGTCAGCGTGACCATCCATGAAATCAGCGACAGCAGCCCCAGACGCATAATCAGCGCCAGTGATAAcccc < 1:189530/298‑1 (MQ=255) aCTGCAGTAATTACCGCATCCAACTAGAAGACTGCGTCAAGGATGAC‑AATCTGTGTGACGACCACCTAGAAACTGGCGTAGCCTTTACCGTGGCCGGAATCATGATCGCGGTTTTCCAGCCGTTC‑ATGCAGTTCGGTTGTTGCTTTGAACAGCAAGAATATCCCCCCGAACAACATAATCAGGTCGCGTCCGGAGAAGTAGAAATCCATGACGGTAAATAGCGGTTTGGTCAGCGTGACCATCCATGAAATCAGCGACAGCAGCCCCAGACGCATAATCAGCGCCAGTGATAACCCCAGc < 2:487200/300‑1 (MQ=255) aCTGCAGTAATTACCGCATCCAACGAGAAGACGGCGTCAAGGATGAC‑AATCTGTGTGACGACCACCTAGAAACTGGCGTAGCCTTTACCGTGGCCGGAATCATGATCGCGGTTTTCCAGCCGTTC‑ATGCAGTTCGGTTGTTGCTTTGAACAGCAAGAATATCCCCCCGAACAACATAATCAGGTCGCGTCCGTAGAAGGAGAAATCCATGACGGTAAATAGCGGTTTGGTCAGCGTGACCATCCATGAAATCAGCGACAGCAGCCCCAGACGCATAATCAGCGCCAGTGATAACCCCAGc < 2:487197/300‑1 (MQ=255) cTGCAGTAATTACCGCATCCAACGAGAAGACGGCGTCAAGGATGAC‑AATCTGTGTGACGACCACCCAGAAACTGGCGTAGCCTTTACCGTGGCCGGAATCATGATCGCGGTTTTCCAGCCGTTC‑ATGCAGTTCGGTTGTTGCTTTGAACAGCAAGAATATCCCCCCGAACAACATAATCAGGTCGCGTCCGGAGAAGGAGAAATCCATGACGGTAAATAGCGGTTTGGTCAGCGTGACCATCCATGAAATCAGCGACAGCAGCCCCAGACGCATAATCAGCGCCAGTGATAACCCCAGCa > 1:17563/1‑300 (MQ=255) gCAGTAATTACCGCATCCAACGAGAAGACGGCGTCAAGGATGAC‑AATCTGTGTGACGACCACCCAGAAACTGGCGTAGCCTTTACCGTGGCCGGAATCATGATCGCGGTTTTCCAGCCGTTC‑ATGCAGTTCGGTTGTTGCTTTGAACAGCAAGAATATCCCCCCGAACAACATAATCAGGTCGCGTCCGGAGAAGGAGAAATCCATGACGGTAAATAGCGGTTTGGTCAGCGTGACCATCCATGAAATCAGCGACAGCAGCCCCAGACGCATAATCAGCGCCAGTGATAACCCCAGCaaa > 1:337714/1‑300 (MQ=255) gTAATTACCGCCTCCAACGAGAAGACGGCGTCAAGGATGAC‑AATCTGTGTGACGACCACCCAGAAACTGGCGTAGCCTTTACCGTGGCCAGaacca > 2:96167/1‑93 (MQ=255) ttACCGCATCCAACGAGAAGACGGCGTCAAGGATGAC‑AATCTGTGTGACGACCACCCAGAAACTGGCGTAGCCTTTACCGTGGCCGGAATCATGATCGCGGTTTTCCAGCCGTTC‑ATGCAGTTCGGTTGTTGCTTTGAACAGCAAGAATATCCCCCCGAACAACATAATCAGGTCGCGTCCGGAGAAGGAGAAATCCATGACGGTAAATAGCGGTTTGGTCAGCGTGACCATCCATGAAATCAGCGACAGCAGCCCCAGACGCATAATCAGCGCCAGTGATAACCCCAGCAAACGCGCtt < 1:565158/300‑1 (MQ=255) agaCGGCTTCAAGGATGAC‑AATTTGTGTGACGACCACCCAGAAACTGGCGTAGCCTTTACCGTGGCCGGAATCATGATCGCGGTTTTCCAGCCGTTC‑ATGCAGTTCGGTTGTTGCTTTGAACAGCAAGAATATCCCCCCGAACAACATAATCAGGTCGCGTCCGGAGAAGGAGAAATCCATGACGGTAAATAGCGGTTTGGTCAGCGTGACCATCCATGAAATCAGCGACAGCAGCCCCAGACGCATAATCAGCGCCAGTGATAACCCCAGCAAACGCGCTTTATCGCGTTGTTTTggcg < 2:47071/300‑1 (MQ=255) aaGGATGAC‑AATCTGTGTGACGACCACCCAGAAACTGGCGTAGCCTTTACCGTGGCCGGAATCATGATCGCGGTTTTCCAGCCGTTC‑ATGCAGTTCGGTTGTTGCTTTGAACAGCAAGAATATCCCCCCGAACAACATAATCAGGTCGCGTCCGGAGAAGGAGAAATCCATGACGGTAAATAGCGGTTTGGTCAGCGTGACCATCCATGAAATCAGCGACAGCAGCCCCAGACGCATAATCAGCGCCAGTGATAACCCCAGCAAACGCGCTTTATCGCGTTGTTTTGGCGGCAGTTTGTc > 1:377458/1‑300 (MQ=255) ggATGAC‑AATCTGTGTGACGACCACCCAGAAACTGGCGTAGCCTTTACCGTGGCCGGAATCATGATCGCGGTTTTCCAGCCGTTC‑ATGCAGTTCGGTTGTTGCTTTGAACAGCAAGAATATCCCCCCGAACAACATAATCAGGTCGCGTCCGGAGAAGGAGAAATCCATGACGGTAAATAGCGGTTTGGTCAGCGTGACCATCCATGAAATCAGCGACAGCNGCCCCAGACGCATAATCAGCGCCAGTGATAACCCCAGCAAACGCGCTTTATCGCGTTGTTTTGGCGGCAGTTTGTCa > 1:425005/1‑299 (MQ=255) attacgatttgtgtgACGACCACCCAGAAACTGGCGTAGCCTTTACCGTGGCCGGAATCATGATCGCGGTTTTCNAGCCGTTC‑ATGCAGTTCGGTTGTTGCTTTGAACAGCAAGAATATCCCCCCGAACAACATAATCAGGTCGCGTCCGGAGAAGGAGAAATCCATGACGGTAAATAGCGGTTTGGTCAGCGTGACCATCCATGAAATCAGCGACAGCAGCCCCAGACGCATAATCAgcg < 2:184955/232‑1 (MQ=255) | CTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGGGGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTACCGCCGCCATCATCACCGGCAGATGGTTAACCATCCCTACTGCAGTAATTACCGCATCCAACGAGAAGACGGCGTCAAGGATGAC‑AATCTGTGTGACGACCACCCAGAAACTGGCGTAGCCTTTACCGTGGCCGGAATCATGATCGCGGTTTTCCAGCCGTTC‑ATGCAGTTCGGTTGTTGCTTTGAACAGCAAGAATATCCCCCCGAACAACATAATCAGGTCGCGTCCGGAGAAGGAGAAATCCATGACGGTAAATAGCGGTTTGGTCAGCGTGACCATCCATGAAATCAGCGACAGCAGCCCCAGACGCATAATCAGCGCCAGTGATAACCCCAGCAAACGCGCTTTATCGCGTTGTTTTGGCGGCAGTTTGTCA > NC_000913/1900910‑1901481 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |