New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 781222	62 (0.860)	6 (0.090)	5/552	5.8	8.9%	noncoding (76/76 nt)	lysY	tRNA‑Lys
	?	NC_000913	781809 =	65 (0.960)					intergenic (+157/‑276)	lysQ/nadA	tRNA‑Lys/quinolinate synthase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATC‑AAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGAC  >  NC_000913/780945‑781514                                                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                                                                        gCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCACTCATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTCGCTCAGATGGGAGAGCACCTCCCTTACAAGGAGGGGGTAGGTGGTTCGATCCCGTCATCACCCACCACTCGGGTTGTTAGCTCAGGTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTCACATC‑AAACTCa                                                                                                                                                                                                                                                                                      >  2:538903/1‑296 (MQ=21)   gtgtAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGTAGGGGGTCGGCGGTTCGATCCCTTCATCACCCATCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAAtttaaaggtggttactggtagag                                                                                                                                                                                                                                                                                 <  1:393921/300‑21 (MQ=21)        ggATAACGTTGCGTCANCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGNCCCACCAGTTTTAACATC‑NAACTCAGATGTTAAGc                                                                                                                                                                                                                                                                            >  1:493935/1‑299 (MQ=255)               gTTGCGTCAGCAACGGCCCGTAGGGCGAGCTAAGCGAGTCATCCTGTACGATCCACCACTAATGACGGTGGGTTCGGGAGAAGTAGTTTGTAGTATCCAGCGTAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATC‑AAACTCAGATGTTAAGCGTGAAgg                                                                                                                                                                                                                                                                     <  1:782/299‑1 (MQ=255)                   cGTCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATC‑AAACTCAGATGTTAAGCGTGAAGGATAAc                                                                                                                                                                                                                                                                >  1:544233/1‑300 (MQ=255)                             ggCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCACTAGTGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAACGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTAGGCGGTTCGATCCCGTCATCAACCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGAACCACCAGGTTTAACATC‑AAACTCAGATGTTAAGTGTAAAGGCTAACCTTGCGCCa                                                                                                                                                                                                                                                       >  2:129116/1‑299 (MQ=21)                                         gagcgaAGCGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATC‑AAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTa                                                                                                                                                                                                                                          >  1:309749/1‑300 (MQ=255)                                                  gaGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATC‑AAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGgcgag‑c                                                                                                                                                                                                                                 >  1:60957/1‑299 (MQ=255)                                                       aTCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATC‑AAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGag‑cgaag‑c                                                                                                                                                                                                                           >  1:73475/1‑299 (MQ=255)                                                       aTCCTGCACGACCCACCACTAATAACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGTAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCGTCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAACCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTACCACC‑GAAATCAGGTGTTAAGAGTGAAGGATAGCGTTGCGCCAGAAACGGCACGTAGGGCGag‑cgaag‑c                                                                                                                                                                                                                           >  2:200824/1‑299 (MQ=17)                                                          cTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAGGTAGTTTGTAGTATCCAGCGCCGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTCCCAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCCGGTTCGCATCCTGCACGAACCACCAGTTTTCACGTC‑AAAGTTGGGTGTTAAGGGTGAAGGATAATGTTGGGCAAGCACCGGCCCGTAGGGCGAG‑CGAAG‑CGAGt                                                                                                                                                                                                                       >  2:111367/1‑300 (MQ=17)                                                          cTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTTTAGTATCCAGCGCAGTATCGGGTGATTAGNTCAGCTGGGAGAGCACCTCCCTTACAAGTAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATC‑AAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAggg                                                                                                                                                                                                                                       <  2:451749/286‑1 (MQ=255)                                                          cTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCATTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATC‑AAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCACGTAggg                                                                                                                                                                                                                                       >  1:451749/1‑286 (MQ=255)                                                                     accacTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACT‑GGTAGAGAA‑CGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCAc                                                                                                                                                                                                             <  1:314421/300‑1 (MQ=14)                                                                        acTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATC‑AAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGAcc                                                                                                                                                                                                         >  1:408550/1‑300 (MQ=255)                                                                        acTAATGACGGTGGGGTCGGTGGAATTAGTGTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATC‑AAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGAc                                                                                                                                                                                                          <  1:238915/299‑1 (MQ=255)                                                                                     ggTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTCGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATC‑AAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCTTGCACGACCCACCAATTTTaa                                                                                                                                                                                             >  2:100236/1‑299 (MQ=255)                                                                                     ggTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATC‑AAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCAATCTTa                                                                                                                                                                                              >  2:98261/1‑298 (MQ=255)                                                                                           gTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTCAACACC‑CAACTCAGATGTTCCGCGTGAAGGATAACGCTGCGCCAAAAACAACCAACCGGGAGAG‑AGAAG‑CGAGTCGTCCTGCACGACCCACCAATCTTAAAGAtt                                                                                                                                                                                        >  1:443579/1‑298 (MQ=17)                                                                                           gTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAAtttcaaaacacaccccaaaggc                                                                                                                                                                                                                                                                                  >  1:443608/1‑192 (MQ=14)                                                                                                 gttagttGTAGTATCCAGCGTAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCCCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGTTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATC‑AAACTCAGATGTTAAGCGTGAAGGATAACGt                                                                                                                                                                                                                                                              <  2:338433/219‑1 (MQ=255)                                                                                                        gtagtaTCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATC‑ACACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCCATCTTAAAGATTggaaaagaggaaaaa                                                                                                                                                                         >  2:96803/1‑287 (MQ=255)                                                                                                             aTCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTCAAAATC‑AACCCCAGATGTTACGCGTGAAGGGTAACGTTACGCAAGCACCGGCACATAGGGCGAG‑CGCAG‑CTATGCCTCCTGTACGACCCACCAAGCTTAAAgtctgatcccgcgtacaatgcttt                                                                                                                                                                    >  2:213211/1‑277 (MQ=14)                                                                                                             aTCCAGCGCAGTATCGGATGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGTGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCCGCACGACCCACCAGTTTCAACacccaccccaga                                                                                                                                                                                                                                                                                     >  2:213172/1‑179 (MQ=11)                                                                                                                                gATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCACTTGGTCGCAGTTTCGACTNCTGCACGACCCACCAGTTTTACCACC‑AAACCCAGATGTTAAGCGGGAAGGATAAAGTTGCGCCAACAACGGCACGTAGGGCGAG‑CGAAG‑CGAGTCCTCATGCACGACCCACCAAGCTTaagga                                                                                                                                                                                          >  2:420358/1‑256 (MQ=14)                                                                                                                                 aTTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATC‑AAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGt                                                                                                                                                <  2:408550/300‑1 (MQ=255)                                                                                                                                          gCTGGGGGAGCACCTCCCTTACAAGGAGGGGGTCTGCGGTTCGATCCCGTCATCACCTACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATC‑AAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTc                                                                                                                                       <  1:303271/300‑1 (MQ=255)                                                                                                                                              ggAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAC‑CAGGTCGTTCGCTCAATTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTCACATC‑AAAACCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCAcctgtctcct                                                                                                                                                                                                    >  1:338171/1‑225 (MQ=11)                                                                                                                                                   gCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATC‑AAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCGGCGACGGCCCGAAGGGCGAG‑CGAAG‑CGANTCATCCTGCAc                                                                                                                                                                                                             >  2:461241/1‑221 (MQ=255)                                                                                                                                                   gCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATC‑AAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCGGCGACGGCCCGAAGGGCGAG‑CGAAG‑CGAGTCATCCTGCAc                                                                                                                                                                                                             <  1:461241/221‑1 (MQ=255)                                                                                                                                                         cccTTACAAGTAGGGGGTCTGCGGTTCGATCCCGTCATCACCCACCAC‑CTGGTCGTTAGCTCAGTTTGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATC‑AAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTAt                                                                                                                                                    <  2:294411/271‑1 (MQ=255)                                                                                                                                                         cccTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATC‑AAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGt                                                                                                                        >  1:290893/1‑300 (MQ=255)                                                                                                                                                         cccTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATC‑AAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCACAGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGt                                                                                                                        >  2:347031/1‑300 (MQ=255)                                                                                                                                                         cccTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAC‑CGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATC‑AAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTAt                                                                                                                                                    >  1:294411/1‑271 (MQ=255)                                                                                                                                                         cccTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAC‑CGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCACAGGGTCGAATCCTGCACGACCCACCAGTTTTAACATC‑GAAGCCAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTCACACCCGTATGGGTCGTTAGCTCAGTTGGt                                                                                                                                >  2:512755/1‑291 (MQ=14)                                                                                                                                                         cccTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCAACCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATC‑AAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGCCATCCTGCAcacacc                                                                                                                                                                                                        >  2:169573/1‑215 (MQ=255)                                                                                                                                                           cTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATC‑AAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCACGTAGGGCGag‑cgaa                                                                                                                                                                                                                              >  2:504383/1‑197 (MQ=255)                                                                                                                                                            ttACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAC‑CGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCACAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATC‑AAATGCAGATGTTAAGCGTGGAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTg                                                                                                                      <  1:512755/298‑1 (MQ=255)                                                                                                                                                                aaGGAGGGGGTTGGTGGTTCGATCCCTTCATCAACCAACACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATC‑AAACTCAGATGTTAAGCGTGAAGGATAACGt                                                                                                                                                                                                                                                              <  1:535302/161‑1 (MQ=14)                                                                                                                                                                                     aTCCCGTCATCACCCACCAATCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATC‑AAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCACGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCACCGAGTAGAAATTTTTCAGGTAGCAccc                                                                                                                                                        >  2:312024/1‑240 (MQ=17)                                                                                                                                                                                         cGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATC‑AAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAAt                                                                                        >  1:451700/1‑300 (MQ=255)                                                                                                                                                                                              tcaCCCACCAC‑CGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTACCATC‑ACAGCCAGATGTTACGCGTGGAGGATACCGTTGCGCCAGCAACGGCACGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGAACCACCAATCTTGAAGGTTGGCCCAGCGTAAGGATCTTTCAGGTAACACCAGTATGGGTAGTTAGCTAAGTTGGTAGAGTAGTTGACTTTTAACCAATTGGTAGCAGGTTCGAATACTGCa                                                                                  >  2:582556/1‑300 (MQ=17)                                                                                                                                                                                                acccaccACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATC‑ACCCTCAGATGTTAAGTGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCAATCTTAAAGGTTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTAGTTAGCTCGGTTGGTAGAGTAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCAc                                                                                 >  1:231571/1‑300 (MQ=255)                                                                                                                                                                                                aaccaacaaccGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATC‑AAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTNATCCTGCACGACccac                                                                                                                                                                                                      <  1:490783/173‑1 (MQ=255)                                                                                                                                                                                                 accaaccatCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATC‑AAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCAc                                                                                                                                                                                                             <  2:338171/167‑1 (MQ=255)                                                                                                                                                                                                    accacTCTGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGAACGACNCACCAGTTTTAACATC‑AAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCATGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGAc                                                                              <  1:420358/299‑1 (MQ=255)                                                                                                                                                                                                    accacTCGGTTCGTTAGCTCAGTTGGTATAGCAGTTGACTTTTAATCAATTGGTCGCAGTTTCGAATCCTGCACGACCCACCAGTTTTAACATC‑AAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGAc                                                                              <  2:314763/299‑1 (MQ=255)                                                                                                                                                                                                     accatCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATC‑AAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCTTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCTCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGAc                                                                              <  1:582556/294‑1 (MQ=255)                                                                                                                                                                                                        atCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATC‑AAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTNATCCTGCACGACccac                                                                                                                                                                                                      <  1:490512/174‑1 (MQ=255)                                                                                                                                                                                                           ggttCGTTAGCTCAGTTGTTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATC‑AAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCaa                                                                                                                                                                                                   <  2:378964/172‑1 (MQ=255)                                                                                                                                                                                                           ggtgcGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATC‑AANCTCAGATGTTAAGCGTTAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCAAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAACCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCaa                                                                       <  2:451700/295‑1 (MQ=255)                                                                                                                                                                                                                    gCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATC‑AAACTCAGATGTTAAGCGTGAAGGATAACGt                                                                                                                                                                                                                                                              <  1:546358/109‑1 (MQ=255)                                                                                                                                                                                                                    gCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATC‑AAACTCAGATGTTAAGCGTGAAGGATAACGt                                                                                                                                                                                                                                                              >  2:546358/1‑109 (MQ=255)                                                                                                                                                                                                                        aGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATC‑AAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTCTAAGGTAACAACCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGAAGGTTCGAATCCTGCACGACCCACCAATGTaaaaaggtgta                                                         >  1:10945/1‑292 (MQ=255)                                                                                                                                                                                                                                    aGTTGACTTTTAATTAATTGGGCGCAGTTTCGGATCCTGCACGACCCACCAGTTTTAACATC‑AAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATTCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAAc                                             <  2:493935/300‑1 (MQ=255)                                                                                                                                                                                                                                                   aaTTGGTCGCAGGTTCGAATCCTGCACTACCCACCAGTTTTAACATC‑AAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGt                               <  1:98261/299‑1 (MQ=255)                                                                                                                                                                                                                                                   aaTTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATC‑AAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGt                               <  1:100236/299‑1 (MQ=255)                                                                                                                                                                                                                                                                ttCGAATCCTGCACTACCCACCAGTCTGAACATC‑AAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCAACCGATCCTAAAGATCGGCCCCGAGGAAAAACCCTTCAGTGAACACCCGGATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACgg                 <  2:36194/300‑1 (MQ=38)                                                                                                                                                                                                                                                                               aCCCACCAGTTTTAACATC‑AAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGag‑cgaa                                                                                                                                                                                                                              >  2:438770/1‑81 (MQ=255)                                                                                                                                                                                                                                                                               aCCCACCAGTTTTAACATC‑AAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCCCCAATCTTAACGGCTGGCCCCGAGCAAAAATCTTTCAGGTCAAACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGAAGGTTCGAATCCTGCACGACCCAACAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTAAGTTAGCAAAGGCACGAAGGGCGAGAc  >  1:571125/1‑300 (MQ=38)                                                                                                                                                                                                                                                                               aCCCACCAGTTTTAACATC‑AAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCAAGAGTAAAAATCTTTCAGGTAACCCCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGCGAACGTGGACGATAATGTTGCGTTAGCAACGACACGAAGGGCGAGAc  >  2:207561/1‑300 (MQ=38)                                                                                                                                                                                                                                                                               aCCCACCAGTTTTAACATC‑AAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCAGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCNCCAATCTTAAAGATTGGCCCCGAGTAAAAATCNTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATCACGTTGCGTTAGcca                    >  2:438901/1‑280 (MQ=255)                                                                                                                                                                                                                                                                               aCCCACCAGTTTTAACATC‑AAACTCAGATGTTAAGCGTAAAGGACAACGTTGCGCCAGCAACGGCCCGTAGGgcga                                                                                                                                                                                                                                    >  2:438780/1‑76 (MQ=255)                                                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                                                                        GCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATC‑AAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGAC  >  NC_000913/780945‑781514

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.