| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,911,929 | 2 bp→TT | coding (647‑648/882 nt) | htpX ← | protease HtpX |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,911,929 | 0 | C | T | 100.0% | 206.1 / NA | 64 | W216* (TGG→TAA) | htpX | protease HtpX |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (30/34); total (30/34) | |||||||||||
| * | NC_000913 | 1,911,930 | 0 | C | T | 98.4% | 186.6 / NA | 64 | W216* (TGG→TAA) | htpX | protease HtpX |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base T (30/33); minor base G (0/1); total (30/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
ATAAAAAAAGCGCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTATTCACCCGTACGCAGAGCTTCAATTCGTTTATCCAGCGGCGGGTGGGTCATGAACAACTCACTGAGCGATTTCGACTTACCGTTAATGCAGAGAGCCATCATGCTGGTTGCTTCTTGCGGTTCATAGCTGGTTTTCAGGCGCTGCAGCGCGGCAATCATTTTCTCGCG‑ACCAACCAGTTTTGCCGAACCGGCATCAGCATGGAATTCACGATGACGCGAGAACCACATGGTGATAATGCTCGCCAGAATACCAAACACCAGTTCCAGAACCGTTGCAACCGCAAAGTAGATCAGCGGGTTGCCGTTGCTCTCTTCACCTTCATCACGATTTCCGCCCATAAAACCCGCGGCAAGCTGCGCCAGAATACGGGAAATAAAGATAACGAAGGTGTTCACCACGCCCTGAATCAGCGTCATGGTGACCATATCACCATTGGCGATGTGGCTGATTTCGTGAGCAATTACCGCCTCGGCTTCATCCGGGCTCATGTTCTGCAGCAAACCGGTGCTGACA > NC_000913/1911646‑1912220 || agaaaaaaaGCGCATCGATCAGGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTATTCACCCGTACGCAGAGCTTCAATTCGTTTATCCAGCGGCGGGTGGGTCATGAACAACTCACTGATCGATTTCGACTTACCGTTAATGCAGAGAGCCATCATGCTGGTTGCTTCTTGCGGTTCATAGCTGGTTTTCAGGCGCTGCAGCGCGGCAATCATTTTCTCGCG‑ACCAACCAGTTTTGCCGAACCGGCATCAGCATGGAATTCACGATGACGCGAGAATTACATGGTGATAATg < 2:684571/297‑1 (MQ=255)aTAAAAAAAGCGCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTATTCACCCGTACGCAGAGCTTCAATTCGTTTATCCAGCGGCGGGTGGGTCATGAACAACTCACTGAGCGATTTCGACTTACCGTTAATGCAGAGAGCCATCATGCTGGTTGCTTCTTGCGGTTCATAGCTGGTTTTCAGGCGCTGCAGCGCGGCAATCATTTTCTCGCG‑ACCAACCATTTTTGCCGAACCGGCATCAGCATGGAATTCACGATGACGCGAGAATTACATGGTGATAATGc < 2:319719/300‑1 (MQ=255)aTAAAAAAAGCGCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTATTCACCCGTACGCAGAGCTTCAATTCGTTTATCCAGCGGCGGGTGGGTCATGAACAACTCACTGAGCGATTTCGACTTACCGTTAATGCAGAGAGCCATCATGCTGGTTGCTTCTTGCGGTTCATAGCTGGTTTTCAGGCGCTGCAGCGCGGCAATCATTTTCTCGCG‑ACCAACCAGTTTTGCCGAACCGGCATCAGCATGGAATTCACGATGACGCGAGAATTACATGGTGATAATg < 1:394196/299‑1 (MQ=255)aTAAAAAAAGCGCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCATATTACTGCAGGGAGTCACCCGTACGCAGAACTTCAATTCGTCTATCCAGCGGCGGGTGGGGCATGAACAACTCACTGAGCGATTTCGACTTACCGGTAATGCAGAGAGCCATCATGCTGGTTGCTTCTTGCGGTTCATAGCTGGTTTTCAGGCGCTTCAGCGCGGCAATCATTTTCTCGCG‑ACCAACCAGTTTTGCCGAACCGGCATCAGCATGGAATTCACGATGACGCGAGAATTACATGGTGATAATGc < 2:632329/300‑1 (MQ=255)aTAAAAAAAGCGCGTCGATCAAGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTATTCACCCGTACGCAGAGCTTCAATTCGTTTATCCAGCGGCGGGTGGGTCATGAACAACTCACTGAGCGATTTCGACTTACCGTTAATGCAGAGAGCCATCATGCTGGTTGCTTCTTGCGGTTCATAGCTGGTTTTCAGGCGCTGCAGCGCGGCAATCATTTTCTCGCG‑ACCAACCAGTTTTGCCGAACCGGCATCAGCATGGAATTCACGATGACGCGAGAATTACATGTTGATAATg < 2:683841/299‑1 (MQ=255) aaaaaaaGCGCCTCTATCAGGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTATTCACCCGTACGCAGAGCTTCAAGTCGTTTATCCAGCGGCGGGTGGGTCATGAACAACTCACTGAGCGATTTCGACTTACCGTTAATGCAGAGAGCCATCATGCTGGTTGCTTCTTGCGGTTCATAGCTGGTTTTCAGGCGCTACAGCGCGGCAATCATTTTCTCGCG‑ACCAACCAGTTTTGCCGAACCGGCATCAGCATGGAATTCACGATGACGCGAGAATTACATGGTGATAATGc < 2:319727/298‑1 (MQ=255) aaaaGCGCGTCGATCAGGACGCGCTTTTTAGTATTTATTTCGTGTTGTTGGGGGTATTCACCCGTACGCAGAGCTTCAATTCGTTTATCCAGCGGCGGGTGGGTCATGAACAACTCACTGAGCGATTTCGACTTACCGTTAATGCAGAGAGCCATCATGCTGGTTGCTTCTTGCGGTTCATAGCTGGTTTTCAGGCGCTGCAGCGCGGCAATCATTTTCTCGCG‑ACCAACCAGTTTTGCCGAACCGGCATCAGCATGGAATTCACGATGACGCGAGAATTACATGGTGATAATGCTCGcc < 1:487502/300‑1 (MQ=255) aaaaGCGCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTATTCACCCGTACGCAGAGCTTCAATTCGTTTATCCAGCGGCGGGTGGGTCATGAACAACTCACTGAGCGATTTCGACTTACCGTTAATGCAGAGAGCCATCATGCTGGTTGCTTCTTGCGGTTCATAGCTGGTTTTCAGGCGCTGCAGCGCGGCAATCATTTTCTCGCG‑ACCAACCAGTTTTGCCGAACCGGCATCAGCATGGAATTCACGATGACGCGAGAATTACATGGTGATAATGCTCGcc < 1:487859/300‑1 (MQ=255) aTCAGGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTATTCACCCGTACGCAGAGCTTCAATTCGTTTATCCNGCGGCGGGTGGGTCATGAACAACTCACTGAGCGATTTCGACTTACCGTTAATGCAGAGAGCCATCATGCTGGTTGCTTCTTGCGGTTCATAGCTGGTTTTCAGGCGCTGCAGCGCGGCAATCATTTTCTCGCG‑ACCAACCAGTTTTGCCGAACCGGCATCAGCATGGAATTCACGATGACGCGAGAATTACATGGTGATAATGCTCGCCAGAATACCAAac < 1:138551/300‑1 (MQ=255) aGGTATTCACCCGTACGCAGAGCTTCAATTCGTTTATCCAGCGGCGGGTGGGTCATGAACAACTCACTGAGCGATTTCGACTTACCGTTAATGCAGAGAGCCATCATGCTGGTTGCTTCTTGCGGTTCATAGCTGGTTTTCAGGCGCTGCAGCGCGGCAATCATTTTCTCGCG‑ACCAACCAGTTTTGCCGAACCGGCATCAGCATGGAATTCACGATGACGCGAGAATTACATGGTGATAATGCTCGCCAGAATACCAAACACCAGTTCCAGAACCGTTGCAACCGCAAAGTAGATCAg < 1:251207/299‑1 (MQ=255) gTATTCACCCGTACGCAGAGCTTCAATTCGTTTATCCAGCGGCGGGTTGGTCATGAACAACTCACTGAGCGATTTCGACTTACCGTTAATGCAGAGAGCCATCATGCTGGTTGCTTCTTGCGGTTCATAGCTGGTTTTCAGGCGCTGCAGCGCGGCAATCATTTTCTCGCG‑ACCAACCAGTTTTGCCGAACCGGCATCAGCATGGAATTCACGATGACGCGAGAATTACATGGTGATAATGCTCGCCAGAATACCAAACACCAGTTCCAGAACCGTTGCAACCGCAAAGTAGATCAGc > 1:29538/1‑298 (MQ=255) gTATTCACCCGTACGCAGAGCTTCAATTCGTTTATCCAGCGGCGGGTGGGTCATGAACAACTCACTGAGCGATTTCGACTTACCGTTAATGCAGAGAGCCATCATGCTGGTTGCTTCTTGCGGTTCATAGCTGGTTTTCAGGCGCTGCAGCGCGGCAATCATTTTCTCGCG‑ACCAACCAGTTTTGCCGAACCGGCATCAGCATGGAATTCACGATGACGCGAGACTTACATGGTGATAATGCTCGCCAGAATACCAAACACCAGTTCCCGAACCGTTGCAACCGCCAAGTAGacca > 2:647485/1‑293 (MQ=255) gTATTCACCCGTACGCAGAGCTTCAATTCGTTTATCCAGCGGCGGGTGGGTCATGAACAACTCACTGAGCGATTTCGACTTACCGTTAATGCAGAGAGCCATCATGCTGGTTGCTTCTTGCGGTTCATAGCTGGTTTTCAGGCGCTGCAGCGCGGCAATCATTTTCTAGCG‑ACCAACCAGTTTTGCCGAACCGGCATCAGCATGGAATTCACGATGACGCGAGAATTACATGGTGATAATGCTCGCCAGAATACCAAACACCAGTTCCAGAACCGTTGCAACCGCAAAGTAGATCAGc > 2:254291/1‑298 (MQ=255) tCACCCGTACGCAGAGCTTCAATTCGTTTATCCAGCGGCGGGTGGGTCATGAACAACTCACTGAGCGATTTCGACTTACCGTTAATGCAGAGGGCCATCATGCTGGTTGCTTCTTGCGGTTCATAGCTGGTTTTCAGGCGCTGCAGCGCGGCAATCATTTTCTCGCG‑ACCAACCAGTTTTGCCGAACCGGCATCAGCATGGAATTCACGATGACGCGAGAATTACATGGTGATAATGCTCGCCAGAATACCAAACACCAGTTCCAGAACCGTTGCAACCGCAAAGTAGATCAGCGGGtt > 1:10480/1‑299 (MQ=255) tCACCCGTACGCAGAGCTTCAATTCGTTTATCCAGCGGCGGGTGGGTCATGAACAACTCACTGAGCGATTTCGACTTACCGTTAATGCAGAGAGCCATCATGCTGGTTGCTTCTTGCGGTTCATAGCTGGTTTTCAGGCGCTGCAGCGCGGCAATCATTTTCTCGCG‑ACCAACCAGTTTTGCCGAACCGGCATCAGCATGGAATTCACGATGACGCGAGAATTACATGGTGATAATGCTCGCCAGAATACCAAACACCAGTTCCAGAACCGTTGCAACCGCAAAGTAGATCAGCGGGtt > 1:10486/1‑299 (MQ=255) tCACCCGTACGCAGAGCTTCAATTCGTTTATCCAGCGGCGGGTGGGTCATGAACAACTCACTGAGCGATTTCGACTTACCGTTAATGCAGAGAGCCATCATGCTGGTTGCTTCTTGCGGTTCATAGCTGGTTTTCAGGCGCTGCAGCGCGGCAATCATTTTCTAGCG‑ACCAACCAGTTTTGCCGAACCGGCATCAGCATGGAATTCACGATGACGCGAGAATTACATGGTGATAATGCTCGCCAGAATACCAAACACCAGTTCCAGAACCGTTGCAACCGCAAAGTAGATCAGCGGGtt > 1:10799/1‑299 (MQ=255) cccGTACGCAGAGCTTCAATTCGTTTATCCAGCGGCGGGTGGGTCATGAACAACTCACTGAGCGATTTCGACTTACCGTTAATGCAGAGAGCCATCATGCTGGTTGCTTCTTGCGGTTCATAGCTGGTTTTCAGGCGCTGCAGCGCGGCAATCATTTTCTCGCG‑ACCAACCAGTTTTGCCGAACCGGCATCAGCATGGAATTCACGATGACGCGAGAATTACATGGTGATAATGCTCGCCAGAATACCAAACACCAGTTCCAGAACCGTTGCAACCGCAAAGTAGATCAGCGGGTTGcc > 2:631265/1‑299 (MQ=255) cccGTACGCAGAGCTTCAATTCGTTTATCCAGCGGCGGGTGGGTCATGAACAACTCACTGAGCGATTTCGACTTACCGTTAATGCAGAGAGCCATCATGCTGGTTGCTTCTTGCGGTTCATAGCTGGTTTTCAGGCGCTGCAGCGCGGCAATCATTTTCTCGCG‑ACCAACCAGTTTTGCCGAACCGGCATCAGCATGGAATTCACGATGACGCGAGAATTACATGGTGATAATGCTCGCCAGAATACCAAACACCAGTTCCAGAACCGTTGCAACCGCAAAGTAGATCAGCGGGTTGcc > 1:662655/1‑299 (MQ=255) cGTACGCAGAGCTTCAATTCGTTTATCCAGCGGCGGGTGGGTCATGAACAACTCACTGAGCGATTTCGACTTACCGTTAATGCAGAGAGCCATCATGCTGGTTGCTTCTTGCGGTTCATAGCTGGTTTTCAGGCGCTGCAGCGCGGCAATCATTTTCTCGCG‑ACCAACCAGTTTTGCCGAACCGGCATCAGCATGGAATTCACGATGACGCGAGAATTACANGGTGATAATGCTCGCCAGAATACCAAACACCAGTTCCAGAACCGTTGCAACCGCAAAGTAGATCAGCGGGTTGCCGtt > 1:505648/1‑300 (MQ=255) tccGCAGAGCTTCGATTCGTTTATCCAGCGGCGGGTGGGTCATGAACAACTCACTGAGCGATTTCGACTTACCGTTAATGCCGAGAGCCATCATGCTGGTTGCTTCTTGCGGTTCATCGCTGGTTTTCAGGCGCTGCCGCGCGGCAATCCTTTTCTCGCGCACAAACC‑GTTTTGCCGAACCGGCATCAGCATGGAATTCACGATGACGCGAGAATTACATGNTGATAATGCTCGCCGGAATACCAAACACCGGTTcc > 1:513555/3‑257 (MQ=255) tACGCAGAGCTTCAATTCGTTTATCCAGCGGCGGGTGGGTCATGAACAACTCACTGAGCGATTTCGACTTACCGTTAATGCAGAGAGCCATCATGCTGGTTGCTTCTTGCGGTTCATAGCTGGTTTTCAGGCGCTGCAGCGCGGCAATCATTTTCTCGCG‑ACCAACCAGTTTTGCCGAACCGGCATCAGCATGGAATTCACGATGACGCGAGAATTACATGNTGATAATGCTCGCCAGAATACCAAACACCAGTTCCAGAACCGTTGCAACCGCAAAGTAGATCAGCGGGTTGCCGTTGc > 1:513173/1‑300 (MQ=255) agagCTTCAATTCGTTTATCCAGCGGCGGGTGGGTCATGAACAACTCACTGAGCGATTTCGACTTACCGTTAATGCAGAGAGCCATCATGCTGGTTGCTTCTTGCGGTTCATAGCTGGTTTTCAGGCGCTGCAGCGCGGCAATCATTTTCTCGCG‑ACCAACCAGTTTTGCCGAACCGGCATCAGCATGGAATTCACGATGACGCGAGAATTACATGGTGATAATGCTCGCCAGAATACCAAACACCAGTTCCAGAACCGTTGCAACCGCAAAGTAGATCAGCGGGTTGCCGTTGctc < 2:450727/297‑1 (MQ=255) aaTTCGTTTATCCAGCGGCGGGTGGGTCATGAACAACTCACTGAGCGATTTCGACTTACCGTTAATGCAGAGAGCCATCATGCTGTTTGCTTCTTGCGGTTCATAGCTGGTTTTCAGGCGCTGCAGCGCGGCAATCATTTTCTCGCG‑ACCAACCAGTTTTGCCNAACCGGCATCAGCATGGAATTCACGATGACGCGAGAATTACATGGTGATAATGCTCGCCAGAATACCAAACACCAGTTCCAGAACCGTTGCAACCGCAAAGTAGATCAGCGGGTTGCCGTTGCTCTCTTCACCtt < 2:514735/299‑1 (MQ=255) gcggcgGGTGGGTCATGAACAACTCACTGAGCGATTTCGACTTACCGTTAATGCAGAGAGCCATCATGCTGGTTGCTTCTTGCGGTTCATAGCTGGTTTTCAGGCGCTGCAGCGCGGCAATCATTTTCTCGCG‑ACCAACCAGTTTTGCCGAACCGGCATCAGCATGGAATTCACGATGACGCGAGAATTACATGGTGATAATGCTCGCCAGAATACCAAACACCAGTTCCAGAACCGTTGCAACCGCAAAGTAGATCAGCGGGTTGCCGTTGCTCTCTTCACCTTCATCACGATTTCCGc > 1:58190/1‑300 (MQ=255) ggtCATGAACAACTCACTGAGCGATTTCGACTTACCGTTAATGCAGAGAGCCATCATGCTGGTTGCTTCTTGCGGTTCATAGCTGGTTTTCAGGCGCTGCAGCGCGGCAATCATTTTCTCGCG‑ACCAACCAGTTTTGCCGAACCGGCATCAGCATGGAATTCACGATGACGCGAGAATTACATGGTGATAATGCTCGCCAGAATACCAAACACCAGTTCCAGAACCGTTGCAACCGCAAAGTAGATCAGCGGGTTGCCGTTGCTCTCTTCACCTTCATCACGATTTCCGCCCATAAAAcc < 1:71409/300‑1 (MQ=255) gtCATGAACAACTCACTGAGCGATTTCGACTTACCGTTAATGCAGAGAGCCATCATGCTGGTTGCTTCTTGCGGTTCATAGCTGGTTTTCAGGCGCTGCAGCGCGGCAATCATTTTCTCGCG‑ACCAACCAGTTTTGCCGAACCGGCATCAGCATGGAATTCACGATGACGCGAGAATTACATGGTGATAATGCTCGCCAGAATACCAAACACCAGTTCCAGAACCGTTGCAACCGCAAAGTAGATCAGCGGGTTGCCGTTGCTCTCTTCACCtt < 2:673563/274‑1 (MQ=255) gtCATGAACAACTCACTGAGCGATTTCGACTTACCGTTAATGCAGAGAGCCATCATGCTGGTTGCTTCTTGCGGTTCATAGCTGGTTTTCAGGCGCTGCAGCGCGGCAATCATTTTCTCGCG‑ACCAACCAGTTTTGCCGAACCGGCATCAGCATGGAATTCACGATGACGCGAGAATTACATGGTGATAATGCTCGCCAGAATACCAAACACCAGTTCCAGAACCGTTGCAACCGCAAAGTAGATCAGCGGGTTGCCGTTGCTCTCTTCACCtt > 1:673563/1‑274 (MQ=255) gtCATGAACAACTCACTGAGCGATTTCGACTTACCGTTAATGCAGAGAGCCATCATGCTGGTTGCTTCTTGCGGTTCATAGCTGGTTTTCAGGCGCTGCAGCGCGGCAATCATTTTCTCGCG‑ACCAACCAGTTTTGCCGAACCGGCATCAGCATGGAATTCACGATGACGCGAGAATTACATGGTGATAATGCTCGCCAGAATACCAAACACCAGTTCCAGAACCGTTGCAACCGCAAAGTAGATCAGCGGGTTGCCGTTGCTCTCTTCACCTTCATCACGATTTCCGCCCATAAAAccc > 1:76585/1‑300 (MQ=255) aTTTCGACTTACCGTTAATGCAGAGAGCCATCATGCTGGTTGCTTCTTGCGGTTCATAGCTGGTTTTCAGGCGCTGCAGCGCGGCAATCATTTTCTCGCG‑ACCAACCAGTTTTGCCGAACCGGCATCAGCATGGAATTCACGATGACGCGAGAATTACATGGTGATAATGCTCGCCAGAATACCAAACACCAGTTCCAGAACCGTTGCAACCGCAAAGTAGATCAGCGGGTTGCCGTTGCTCTCTTCACCTTCATCACGATTTCCGCCCATAAAACCCGCGGCAAGCTGCGCCAGAATAc > 1:204815/1‑300 (MQ=255) tCGACTTACCGTTAATGCAGAGAGCCATCATGCTGGTTGCTTCTTGCGGTTCATAGCTGGTTTTCAGGCGCTGCAGCGCGGCAATCATTTTCTCGCG‑ACCAACCAGTTTTGCCGAACCGGCATCAGCATGGAATTCACGATGACGCGAGAATTACATGGTGATAATGCTCGCCAGAATACCAAACACCAGTTCCAGAACCGTTGCAACCGCAAAGTAGATCAGCGGGTTGCCGTTGCTCTCTTCACCTTCATCACGATTTCCGCCCATAAAACCCGCGGCAAGCTGCGCCAGAATACggg < 1:9328/300‑1 (MQ=255) tCGACTTACCGTTAATGCAGAGAGCCATCATGCTGGTTGCTTCTTGCGGTTCATAGCTGGTTTTCAGGCGCTGCAGCGCGGCAATCATTTTCTCGCG‑ACCAACCAGTTTTGCCGAACCGGCATCAGCATGGAATTCACGATGACGCGAGAATTACATGGTGATAATGCTCGCCAGAATACCAAACACCAGTTCCAGAACCATTGCAACCGCAAAGTAGATCAGCGGGTTGCCGTTGCTCTCTTCACCTTCATCACGATTTCCGCCCATAAAACCCGCGGCAAGCTGCGCCAGAATACggg < 1:397510/300‑1 (MQ=255) ccGTTAATGCAGAGAGCCATCATGCTGGTTGCTTCTTGCGGTTCATAGCTGGTTTTCAGGCGCTGCAGCGCGGCAATCATTTTCTCGCG‑ACCAACCAGTTTTGCCGCACCGGCATCAGCATGGAATTCACGATGACGCGAGAATTACATGGTGATAATGCTCGCCAGAATACCAAACACCAGTTCCAGAACCGTTGCAACCGCAAAGTAGATCAGCGGGTTGCCGTTGCTCTCTTCACCTTCATCACGATTTCCGCCCATAAAACCCGCGGCAAGCTGCGCCAGAATAAGGGAAATaaa > 2:55447/1‑299 (MQ=255) ttAATGCAGAGAGCCATCATGCTGGTTGCTTCTTGCGGTTCATAGCTGGTTTTCAGGCGCTGCAGCGCGGCAATCATTTTCTCGCG‑ACCAACCAGTTTTGCCGAACCGGCATCAGCATGGAATTCACGATGACGCGAGAATTACATGGTGATAATGCTCGCCAGAATACCAAACACCAGTTCCAGAACCGTTGCAACCGCAAAGTAGATCAGCGGGTTGCCGTTGCTCTCTTCACCTTCATCACGATTTCCGCCCATAAAACCCGCGGCAAGCTGCGCCAGAATACGGGAAATAAAGAt > 1:388037/1‑299 (MQ=255) aaTGCAGAGAGCCATCATGCTGGTTGCTTCTTGCGGTTCATAGCTGGTTTTCAGGCGCTGCAGCGCGGCAATCATTTTCTCGCG‑ACCAACCAGTTTTGCCGAACCGGCATCAGCATGGAATTCACGATGACGCGAGAATTACATGGTGATAATGCTCGCCAGAATACCAAACACCAGTTCCAGAACCGTTGCAACCGCAAAGTAGATCAGCGGGTTGCCGTTGCTCTCTTCACCTTCATCACGATTTCCGCCCATAAAACCCGCGGCAAGCTGCGCCAGAATACGGGAAATAAAGATAAc > 2:653936/1‑300 (MQ=255) aaTGCAGAGAGCCATCATGCTGGTTGCTTCTTGCGGTTCATAGCTGGTTTTCAGGCGCTGCAGCGCGGCAATCATTTTCTCGCG‑ACCAACCAGTTTTGCCGAACCGGCATCAGCATGGAATTCACGATGACGCGAGAATTACATGGTGATAATGCTCGCCAGAATACCAAACACCAGTTCCAGAACCGTTGCAACCGCAAAGTAGATCAGCGGGTTGCCGTTGCTCTCTTCACCTTCACCACGATTTCCGCCCATAAAACCCGCGGCAAGCTGCGCCAGAATACGGGAAATAAAGATa > 2:117853/1‑298 (MQ=255) gCAGAGAGCCATCATGCTGGTTGCTTCTTGCGGTTCATAGCTGGTTTTCAGGCGCTGCAGCGCGGCAATCATTTTCTCGCG‑ACCAACCAGTTTTGCCGAACCGGCATCAGCATGGAATTCACGATGACGCGAGAATTACATGGTGATAATGCTCGCCAGAATACCAAACACCAGTTCCAGAACCGTTGCAACCGCAAAGTAGATCAGCGGGTTGCCGTTGCTCTCTTCACCTTCATCACGATTTCCGCCCATAAAACCCGCGGCAAGCTGCGCCAGAATACGGGAAATAAAGATAACGaa > 2:480480/1‑300 (MQ=255) agagCCATCATGCTGGGTGCTTCTTGCGGGTCATAGCTGGTTTTCAGGCGCTGCAGCGCGGCAATCATTTTCTCGCG‑ACCAACCAGTTTTGCCGAACCGGCATCAGCATGGAATTCACGATGACGCGAGAATTACATGGTGATAATGCTCGCCAGAATACCAAACACCAGTTCTAGAACCGTTGCAACCGCAAAGTAGATCAGCGGGTTGCCGTTGCTCTCTTCACCTTCATCACGATTTCCGCCCATAAAACCCGCGGCAAGCTGCGCCAGAATACGGGAAATAAAGATAACGAAgg < 2:102490/298‑1 (MQ=255) ccATCATGCTGGTTGCTTCTTGCGGTTCATAGCTGGTTTTCAGGCGCTGCAGCGCGGCAATCATTTTCTCGCG‑ACCAACCAGTTTTGCCGAACCGGCATCAGCATGGAATTCACGATGACGCGAGAATTACATGGTGATAATGCTCGCCAGAATACCAAACACCAGTTCCAGAACCGTTGCAACCGCAAAGTAGATCAGCGGGTTGCCGTTGCTCTCTTCACCTTCATCACGATTTCCGCCCATAAAACCCGCGGCAAGCTGCGCCAGAATACGGGAAATAAAGATAACGAAGGTGTTca > 1:600180/1‑300 (MQ=255) ccATCATGCTGGTTGCTTCTTGCGGTTCATAGCTGGTTTTCAGGCGCTGCAGCGCGGCAATCATTTTCTCGCG‑ACCAACCAGTTTTGCCGAACCGGCATCAGCATGGAATTCACGATGACGCGAGAATTACATGGTGATAATGCTCGCCAGAATACCAAACACCAGTTCCAGAACCGTTGCAACCGCAAAGTAGATCAGCGGGTTGCCGTTGCTCTCTTCACCTTCATCACGATTTCCGCCCATAAAACCCGCGGCAAGCTGCGCCAGAATACGGGAAATAAAGATAACGAAGGTGTTca > 2:408036/1‑300 (MQ=255) ccATCATGCTGGTTGCTTCTTGCGGTTCATAGCTGGTTTTAAGGCGCTGCAGCGCGGCAATCATTTTCTCGCG‑ACCAACCAGTTTTGCCGAACCGGCATCAGCATGGAATTCACGATGACGCGAGAATTACATGGTGATAATGCTCGCCAGAATACCAAACACCAGTTCCAGAACCGTTGCAACCGCAAAGTAGATCAGCGGGTTGCCGTTGCTCTCTTCACCTTCATCACGATTTCCGCCCATAAAACCCGCGGCAAGCTGCGCCAGAATACGGGAAATAAAGATAACGAAGGTGTTca > 2:402273/1‑300 (MQ=255) tGCTTCTTGCGGTTCATAGCTGGTTTTCAGGCGCTGCAGCGCGGCAATCATTTTCTCGCG‑ACCAACCAGTTTTGCCGAACCTGCATCAGCATGGAATTCACGATGACGCGAGAATTACATGGTGATAATGCTCGCCAGAATACCAAACACCAGTTCCAGAACCGTTGCAACCGCAAAGTAGATCAGCGGGTTGCCGTTGCTCTCTTCACCTTCATCACGATTTCCGCCCATAAAACCCGCGGCAAGCTGCGCCAGAATACGGGAAATAAAGATAACGAAGGTGTTCACCACGCCCTGAAt < 2:29995/300‑1 (MQ=255) tGCTTCTTGCGGTTCATAGCTAGTTTTCAGGCGCTGCAGCGCGGCAATCACCTTCTCGCG‑ACCAACCAGTTTTGCCGAACCGGCATCAGCATGGAATTCACGATGACGCGAGAATTACATGGTGATAATGCTCGCCAGAATACCAAACACCAGTTCCATAACCGTTGCAACCGCAAAGTAGATCAGCGGGTTGCTGTTGCTCTCTTCACCTTCATCACGATTTCCGCCCATAAAACCCGCGGCAAGCTGCGCCAGAATACGGGAAATAAAGATAACGAAGGTGTTCACCACGCCCTGAAt < 2:30127/300‑1 (MQ=255) gCTTCTTGCGGTTCATAGCTGGTTTTCAGGCGCTGCAGCGCGGCAATCATTTTCTCGCG‑ACCAACCAGTTTTGCCGAACCGGCATCAGCATGGAATTCACGATGACGCGAGAATTACATGGTGATAATGCTCGCCAGAATACCAAACACCAGTTCCAGAACCGTNGCAACCGCAAAGTAGATCAGCGGGTTGCCGTTGCTCTCTTCACCTTCATCACGATTTCCGCCCATAAAACCCGCGGCAAGCTGCGCCAGAATACGGGAAATAAAGATAACGAAGGTGTTCACCACGCCCTGAATc < 2:505648/300‑1 (MQ=255) ttcttGCGGTTCATAGCTGGTTTTCAGGCGCTGCAGCGCGGCAATCATTTTCTCGCG‑ACCAACCAGTTTTGCCGAACCGGCATCAGCATGGAATTCACGATGACGCGAGAATTACATGGTGATAATGCTCGCCAGAATACCAAACACCAGTTCCAGAACCGTTGCAACCGCAAAGTAGATCAGCGGGTTGCCGTTGCTCTCTTCACCTTCATCACGATTTCCGCCCATAAAACCCGCGGCAAGCTGCGCCAGAATACGGGAAATAAAGATAACGAAGGTGTTCACCACGCCCTGAATc < 1:97597/298‑1 (MQ=255) tAGCTGGTTTTCAGGCGCTGCAGCGCGGCAATCATTTTCTCGCG‑ACCAACCAGTTTTGCCGAACCGGCATCAGCATGGAATTCACGATGACGCGAGAATTACATGGTGATAATGCTCGCCAGAATACCAAACACCAGTTCCAGAACCGTTGCAACCGCAAAGTAGATCAGCGGGTTGCCGTTGCTCTCTTCACCTTCATCACGATTTCCGCCCATAAAACCCGCGGCAAGCTGCGCCAGAATACGGGAAATAAAGATAACGAAGGTGTTCACCACGCCCTGAATCAGCGTCATGGTGAcc < 1:697533/300‑1 (MQ=255) tttgtaGGCGCTGCAACGCGGCAATCATTTTCGCGCG‑ACCAGCCAGTTTTGCCGAACCGGCATCAGCATGGAATTCACGACGACGCGAGAATTACATGGTGATAATGCTCGCCAGAATACCAAACACCAGTTCNAGAACCGTTGCAACCGCAAAGTAGATCAGCGGGTTGCCTTTGCTCTCTTCACCTTCATCACGATTTCCGCCCATAAAACCCGCGGCAAGCTGCGCCAGAATACGGGAAATAAAGATAACGAAGGTGTTCACCACGCCCTGAATCAGCGTCATGGTGACCATATCAc < 2:213527/295‑1 (MQ=255) tttCAGGCACTGCAGCGCGGCAATCATTTTCTCGCG‑ACCAACCAGTTTTGCCGAACCGGCATCAGCATGGAATTCACGATGACGCGAGAATTACATGGTGATAATGCTCGCCAGAATACCAAACACCAGTTCCNGAACCGTTGCAACCGCAAAGTAGATCAGCGGGTTGCCGTTGCTCTCTTCACCTTCATCACGATTTCCGCCCATAAAACCCGCGGCAAGCTGCGCCAGAATACGGGAAATAAAGATAACGAAGGTGTTCACCACGCCCTGAATCAGCGTCATGGTGACCATATCAcc < 2:223637/300‑1 (MQ=255) g‑ACCAACCAGTTTTGCCGAACCTGCATCAGCATGGAATTCACGATGACGCGAGAATTACATGGTGATAATGCTCGCCAGAATACCAAACACCAGTTCCAGAACCGTTGCAACCGCAAAGTAGATCAGCGGGTTGCCGTTGCTCTCTTCACCTTCATCACGATTTCCGCCCATAAAACCCGCGGCAAGCTGCGCCAGAATACGGGAAATAAAGATAACGAAGGTGTTCACCACGCCCTGAATCAGCGTCATGGTGACCATATCACCATTGGCGATGTGGCTGATTTCGTGAGCAATTACCg < 2:421776/300‑1 (MQ=255) accaaccaGTTTTGCCGAACCGGCATCAGCATGGAATTCACGATGACGCGAGAATTACATGGTGATAATGCTCGCCAGAATACCAAACACCAGTTCCAGAACCGTTGCAACCGCAAAGTAGATCAGCGGGTTGCCGTTGCTCTCTTCACCTTCATCACGATTTCCGCCCATAAAACCCGCGGCAAGCTGCGCCAGAATACGGGAAATAAAGATAACGAAGGTGTTCACCACGCCCTGAATCAGCGTCATGGTGACCATATCACCATTGGCTATGTGGCTGATTTCGTGAGCAATTACCGc > 1:417535/1‑300 (MQ=255) aaccaTTTTTGCCGAACCGGCATCAGCATGGAATTCACGATGACGCGAGAATTACATGGTGATAATGCTCGCCAGAATACCAAACACCAGTTCCAGAACCGTTGCAACCGCAAAGTAGATCAGCGGGTTGCCGTTGCTCTCTTCACCTTCATCACGATTTCCNCCCATAAAACCCGCGGCAAGCTGCGCCAGAATACGGGAAATAAAGATAACGAAGGTGTTCACCACGCCCTGAATCAGCGTCATGGTGACCATATCACCATTGGCGATGTGGCTGATTTCGTGAGCAATTACCGcc < 2:514990/298‑1 (MQ=255) aaccaGTTTTGCCGAACCGGCATCAGCATGGAATTCACGATGACGCGAGAATTACATGGTGATAATGCTCGCCAGAATACCAAACACCAGTTCCAGAACCGTTGCAACCGCAAAGTAGATCAGCGGGTTGCCGTTGCTCTCTTCACCTTCATCACGATTTCCNCCCATAAAACCCGCGGCAAGCTGCGCCAGAATACGGGAAATAAAGATAACGAAGGTGTTCACCACGCCCTGAATCAGCGTCATGGTGACCATATCACCATTGGCGATGTGGCTGATTTCGTGAGCAATTACCGcc < 2:513173/298‑1 (MQ=255) aaccaGTTTTGCCGAACCGGCATCAGCATGGAATTCACGATGACGCGAGAATTACATGGTGATAATGCTCGCCAGAATACCAAACACCAGTTCCAGAACCGTTGCAACCGCAAAGTAGATCAGCGGGTTGCCGTTGCTCTCTTCACCTTCATCACGATTTCCGCCCATAAAACCCGCGGCAAGCTGCTCCAGAATACGGGAAATAAAGATAACGAAGGTGTTCACCACGCCCTGAATCAGCGTCATGGTGACCATATCACCATTGGCGATGTGGCTGATTTCGTGAGCAATTACCGCCTc > 1:360283/1‑300 (MQ=255) accaTTTTTGCCGAACCGGCATCAGCATGGAATTCACGATGACGCGAGAATTACATGGTGAGAATACTCGCCAGAATACCAAACACCAGTTCCAGGACCGTTGCAACCGCAAAGTAGATCAGCGGGTTGCCGTTGCTCTCTTCACCTTCATCACGATTTCCGCCCATAAAACCCGCGGCAAGCTGCTCCAGAATACGGGAAATAAAGAGAACGAAGGTGTTCACCACGCCCTGAATCAGCGTCATGGTGACCATATCACCATTGGCGATGTGGCTGATTTCGTGAGCAATTACCGcc < 2:173692/297‑1 (MQ=255) gTTTTGCCGAACCGGCATCAGCATGGAATTCACGATGACGCGAGAATTACATGGTGATAATGCTCGCCAGAATACCAAACACCAGTTCCAGAACCGTTGCAACCGCAAAGTAGATCAGCGGGTTGCCGTTGCTCTCTTCACCTTCATCACGATTTCCGCCCATAAAACCCGCGGCAAGCTGCGCCAGAATACGGGAAATAAAGATAACGAAGGTGTTCACCACGCACTGAATCAGCGTCATGGTGACCCTATCAACATTGGCGATGTGGCTGATTTCGTGAGTAATTACCGCCtagactt > 2:24517/1‑294 (MQ=255) cGGCATCAGCATGGAATTCACGATGACGCGAGAATTACATGGTGATAATGCTCGCCAGAATACCAAACACCAGTTCCAGAACCGTTGCAACCGCAAAGTAGATCAGCGGGTTGCCGTTGCTCTCTTCACCTTCATCACGATTTCCGCCCATAAAACCCGCGGCAAGCTGCGCCAGAATACGGGAAATAAAGATAACGAAGGTGTTCACCACGCCCTGAATCAGCGTCATGGTGACCATATCACCATTGGCGCTGTGGCTGATTTCGTGAGCAATTACCGCCTCGGCTTCATCCGGGCTCa > 1:118292/1‑300 (MQ=255) cGGCATCAGCATGGAATTCACGATGACGCGAGAATTACATGGTGATAATGCTCGCCAGAATACCAAACACCAGTTCCAGAACCGTTGCAACCGCAAAGTAGATCAGCGGGTTGCCGTTGCTCTCTTCACCTTCATCACGATTTCCGCCCATAAAACCCGCGGCAAGCTGCGCCAGAATACGGGAAATAAAGATAACGAAGGTGTTCACCACGCCCTGAATCAGCGTCATGGTGACCATATCACCATTGGCGATGTGGCTGATTTCGTGAGCAATTACCGCCTCGGCTTCATCCGGGCTCa > 1:116638/1‑300 (MQ=255) cGGCATCAGCATGGAATTCACGATGACGCGAGAATTACATGGTGATAATGCTCGCCAGAATACCAAACACCAGTTCCAGAACCGTTGCAACCGCAAAGTAGATCAGAGGGTTGCCGTTGCTCTCTTCACCTTCATCACGATTTCCGCCCATAAAACCCGCGGCAAGCTGCGCCAGAATACGGGAAATAAAGATAACGAAGGTGTTCACCACGCCCTGAATCAGCGTCATGGTGACCATATCACCATTGGCGATGTGGCTGATTTCGTGAGCAATTACCGCCTCGGCTTCATCCGGGCTCa > 1:117078/1‑300 (MQ=255) ggCATCAGCATTGAATTCACGATGACGCGAGAATGACATGGTGATAATGCTCGCCAGAATACCAAACACCAGTTCCAGAACCGTTGCAACCGCAAAGTAGATCAGCGGGTTGCCGTTGCTCTCTTCACCTTCATCACGATTTCCGCCCATAAAACCCGCGGCAAGCTGCGCCAGAATACGGGAAATAAAGATAACGAAGGTGTTCACCACGCCCTGAATCAGCGTCATGGTGACCATATCACCATTGGCGATGTGGCTGATTTCGTGAGCAATTACCGCCTCGGCTTCATCCGGGCt < 2:577650/297‑1 (MQ=255) gCATCAGCATGGAAGTCACGATGACGCGAGAATTACATGGTGATAATGCGCGCCAGAAGACCAAACACCAGTTCTAGAACCGTTGCAACCGCGAAGTAGATCAGCGGGTTGCCGTGGCTCTCTTCACCTTCATCACGATTTCCNCCCATAAAACCCGCGGCAAGCTACGCCAGAGTACTGGAAAGAAAGATAACGAAGGTGGTCACCACGCTCTGGACCAGCGTCATGGTGACCATATCACCATTGGCGATGTGGCGGATTTCGTGAGCAGTTACCGcc < 2:513555/279‑1 (MQ=255) tCAGCATGGAATTCACGATGACGCGAGAATTACATGGTGATAATGCTCGCCAGAATACCAAACACCAGTTCCAGAACCGTTGCAACCGCAAAGTAGATCAGCGGGTTGCCGTTGCTCTCTTCACCTTCATCACGATTTCCGCCCATAAAACCCGCGGCAAGCTGCGCCAGAATACGGGAAATAAAGATAACGAAGGTGTTCACCACGCCCTGAATCAGCGTCATGGTGACCATATCACCATTGGCGATGTGGCTGATTTCGTGAGCAATTACCGCCTCGGCTTCATCCGGGCTCATGTTc < 1:682023/300‑1 (MQ=255) tCAGCATGGAATTCACGATGACGCGAGAATTACATGGTGATAATGCTCGCCAGAATACCAAACACCAGTTCCAGAACCGTTGCAACCGCAAAGTAGATCAGCGGGTTGCCGTTGCTCTCTTCACCTTCATCACGATTTCCGACCATAAAACCCGCGGCAAGCTGCGCCAGAATACGGGAAATAAAGATAACGAAGGTGTTCACCACGCCCTGAATCAGCGTCATGGTGACCATATCACCATTGGCGATGTGGCTGATTTCGTGAGCAATTACCGCCTCGGCTTCATCCGGGCTCATGTTc < 1:559959/300‑1 (MQ=255) aTTCACGATGACGCGAAAATTACATGGTGATAATGCTCGCCAGAATACCAAACCCCAGTTCCAGAACCGTTGCAAACGCAAAGTAGATCAGCGGGTTGCCGTTGCTCTCTTCACCTTCCTCACGACTTCCGCCCATAAAACCCGCGGCACGCTGCGCCAGAATACGGGAAATAAAGATAACGAAGGTGTTCACCACGCCCTGAATCAGCGTCATGGTGACCATATCAACAGTGGAGATGTGGCTGGCTTCGTGAGCAATTACCGCATCGGCCTCATCCGGGCTCATGTTCTGCAACAAAc > 2:124775/1‑300 (MQ=255) gcgAGAATTACATGTTGATAATGCTCGCCAGAGTACCAAACACCAGTTCCAGAACCGTTGCAACCGCAAAGTAGATCAGCGGGTTGCTGTTGCTCTCTTCACCTTCACCACGATTTCCGCCCATAAAACCCGCGGCAAGCTGCGCCAGAATACGGGAAATAAAGATAACGAAGGTGTTCACCACGCCCTGAATCAGCTTCATGTTGACCATATCACCATTGGCGATGTGGCTGATTTCGTGAGTAATTACCACCTCGGCTCCATCCgtactcacctcc < 2:652200/278‑12 (MQ=255) gcgAGAATTACATGGTGATAATGCTCGCCAGAATACCAAACACCAGTTCCAGAACCGTTGCAACCGCAAAGTAGATCAGCGGGTTGCCGTTGCTCTCTTCACCTTCATCACGATTTCCGCCCATAAAACCCGCGGCAAGCTGCGCCAGAATACGGGAAATAAAGATAACGAAGGTGTTCACCACGCCCTGAATCAGCGTCATGGTGACCATATCACCATTGGCGATGTGGCTGATTTCGTGAGCAATTACCGCCTCGGCTTCATCCGGGCTCATGTTCTGCAGCAAACCGGTGCTGACa < 2:10486/299‑1 (MQ=255) || ATAAAAAAAGCGCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTATTCACCCGTACGCAGAGCTTCAATTCGTTTATCCAGCGGCGGGTGGGTCATGAACAACTCACTGAGCGATTTCGACTTACCGTTAATGCAGAGAGCCATCATGCTGGTTGCTTCTTGCGGTTCATAGCTGGTTTTCAGGCGCTGCAGCGCGGCAATCATTTTCTCGCG‑ACCAACCAGTTTTGCCGAACCGGCATCAGCATGGAATTCACGATGACGCGAGAACCACATGGTGATAATGCTCGCCAGAATACCAAACACCAGTTCCAGAACCGTTGCAACCGCAAAGTAGATCAGCGGGTTGCCGTTGCTCTCTTCACCTTCATCACGATTTCCGCCCATAAAACCCGCGGCAAGCTGCGCCAGAATACGGGAAATAAAGATAACGAAGGTGTTCACCACGCCCTGAATCAGCGTCATGGTGACCATATCACCATTGGCGATGTGGCTGATTTCGTGAGCAATTACCGCCTCGGCTTCATCCGGGCTCATGTTCTGCAGCAAACCGGTGCTGACA > NC_000913/1911646‑1912220 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |