New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 78091869 (0.740)8 (0.120) 6/432 5.4 15.5% noncoding (76/76 nt) lysW tRNA‑Lys
?NC_000913 781445 = 36 (0.530)intergenic (+1/‑132) lysZ/lysQ tRNA‑Lys/tRNA‑Lys
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TAGTAAAACGTGAAGGATAACGTTGCATGAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCACTAACATAGTTAGTTGTAGTATCCAGCGTAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCC  >  NC_000913/780649‑781208
                                                                                                                                                                                                                                                                               |                                                                                                                                                                                                                                                                                                        
tagtaAAACGTGAAGGATAACGTTGCATGAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACTACCCACCACTAACATAGTTAGTTGTAGTATCCAGCTTAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAg                                                                                                                                                                                                                                                                              <  2:437286/297‑1 (MQ=255)
       acgggAAGGATAACGTTGCGTGAGCAACGGCCCGAAGGGCTAGACGAAGTCGAGTCATCCTGCACGACCCACCACTAACATAGTTAGTTGTAGTATCCAGCGTAGTATCGGGTGATTAGCTCAGCTGGTAGAACACCTCCCTTACAAGGATGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGAt                                                                                                                                                                                                                                                                    <  1:577003/296‑1 (MQ=255)
         gTGAAGGATAACGTTGCATGAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCACTAACATAGTTAGTTGTAGTATCCAGCGTAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCTTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATaa                                                                                                                                                                                                                                                                  <  1:356028/300‑1 (MQ=255)
         gTGAAGGATAACGTTGCATGAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCACTAACATAGTTAGTTGTAGTATCCAGCGTAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCATTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACCGGGTCGTTAGCTCAGTTGGTAGAGTAGTTGACTTTTAATCAATTGGTCGCAGGTTCGCATCCTGCACGACCCACCAGTTTTAACATCGAAGACCGATGTTAAGCGTGTAGGATa                                                                                                                                                                                                                                                                   >  2:152411/1‑299 (MQ=255)
            aaGGATAACGTTGCATGAGCAACGGCCCGAAGGGCTAGACGAAGTCGAGTCATCCTGCACGACCCACCACTAACATAGNTAGTTGTAGTATCCAGCGTAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGt                                                                                                                                                                                                                                                               <  1:535515/300‑1 (MQ=255)
                                   ggCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACTACCCACCACGGACATAGTTAGTTGTAGTATCCAGCGTAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACACGGAGGTGGTCGGCGATTCAACCCCGTCATCACCCACCACCGGGTCNTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAANCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAggg                                                                                                                                                                                                                                        <  2:564730/300‑1 (MQ=18)
                                   ggCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCACTAACATAGTTAGTTGTAGTATCCAGCGTAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGTAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAggg                                                                                                                                                                                                                                        <  1:87765/300‑1 (MQ=255)
                                   ggCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCACTAACATAGTTAGTTGTAGTATCCAGCGTAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAggg                                                                                                                                                                                                                                        <  1:184376/300‑1 (MQ=255)
                                    gCCCGAAGGGCGAAACGAAGTCGAGTCATCCTGCACGACCCACCACCAACATAGTTAGTTGTAGTATCCAGCGTAGTATTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTGACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAggg                                                                                                                                                                                                                                        <  2:356190/299‑1 (MQ=255)
                                                      aGTCGAGTCATCCTGCACGACCCACCACTAACATAGTTAGTTGTAGTATCCAGCGTAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATcc                                                                                                                                                                                                                   <  1:383242/300‑1 (MQ=255)
                                                           aGTCATCCTGCACGACCCACCACTAACATAGGTAGTTGGAGTATCCAGCGTAGTATCGGGTGATTAGCTCAGCTGGGANAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCAc                                                                                                                                                                                                              <  1:152411/300‑1 (MQ=255)
                                                               acccTGCACGACCCACCACTAACATAGTTGGTTGTAGTATCCAGCGTAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACCTGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGAc                                                                                                                                                                                                           <  1:431258/297‑1 (MQ=255)
                                                               aTCCTGCCCGCCCCACCACTAACATAGTTAGTTGTAGTATCCAGCGTAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCATTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATcaaactcagatgg                                                                                                                                                                                                                                                                                  >  2:494816/1‑219 (MQ=11)
                                                               aTCCTGCACGACCCACCACTAACATAGTTAGTTGTAGTATCCAGCTTAGTATCGGGTGATTAGCTCAGCTGTGAGAGCACCTCCCTTACAAGTAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGTTCGTTAGCTCAGTTGGTAGAGCAGTTGACTGTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAACTCAGATGt                                                                                                                                                                                                                                                                                  <  1:494816/231‑1 (MQ=14)
                                                               aTCCTGCACGACCCACCACTAACATAGTTAGTTGTAGTATCCAGCGTAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAANACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGAcc                                                                                                                                                                                                          >  1:157015/1‑300 (MQ=255)
                                                               aTCCTGCACGACCCACCACTAACATAGTTAGTTGTAGTATCCAGCGTAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCAc                                                                                                                                                                                                              >  1:718402/1‑296 (MQ=255)
                                                               aTCCTGCACGACCCACCACTAACATAGTTAGTTGTAGTATCCAGCGTAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCAc                                                                                                                                                                                                              <  2:718402/296‑1 (MQ=255)
                                                               aTCCTGCACGACCCACCACTAACATAGTTAGTTGTAGTATCCAGCGTAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCAACCACCACCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGAACCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGGAGGGTAACGTTGCGCCAGCAAAGGCCAGTAGGGCGAGCGAAGCGAGTCATCCTGCACGaac                                                                                                                                                                                                          >  2:113170/1‑298 (MQ=14)
                                                               aTCCTGCACGACCCACCACTAACATAGTTAGTTGTAGTATCCAGCGTAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTACATTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGAACCACCAGTTTTAACATCGAAGCCAGATGTTCAGCGTGTAGGATAACGTTGCGTCGGCGACGGCCAGTAGGGTGAATAAAGCGATTCATCCTGCACGAc                                                                                                                                                                                                           >  2:99034/1‑299 (MQ=17)
                                                                    gCACGACCCACCACTAACATAGTTAGTTGTAGTATCCAGCGTAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGAc                                                                                                                                                                                                           <  1:235678/294‑1 (MQ=255)
                                                                         aCCCACCACTAGGATGGTTAGTTGTAGTATCCAGCGTAGTATCGGGTGATTAGCTCAGCTGGGGGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACAGGGTCGTTAGCTTAGTTGGTAGAGCAGTTGGCTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCAACGGTTTTGACATCGAAGACAGATGTCAAGCGCGTAGGCCAACGTCACGCCAGCAACAGCCCGCCGGGCGAGCTAAGCGGGTCGTCCTGAACGaacaaccaatgct                                                                                                                                                                                                >  2:37580/1‑288 (MQ=14)
                                                                                 cTAACATAGTTAGTTGTAGTATCCAGCGTAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACCGGGTCGTTAGCTCAGTTGGTAGNGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTCACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATccc                                                                                                                                                                                                                  >  2:525984/1‑273 (MQ=255)
                                                                                          ttagttGTAGTATCCAGCGTAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGTAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTgg                                                                                                                                                                              <  1:304609/300‑1 (MQ=255)
                                                                                             gttGTAGTATCCAGCGTAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACCGGGTCGTTAGCTCAGTTGGTAAAGTAGTTGACTTTTCATCAATTGGTCGCAGGTTCGAATCCTGCACGAACCAACAGTTTTCACATCGAAGCCAGATGTTCAGCgt                                                                                                                                                                                                                                                                           >  2:115393/1‑207 (MQ=14)
                                                                                                gtagtaTCCAGCGTAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACCGGGTCTCTGATCCAGTTGTCAAAGCAGCTAACCCTCCACCACTTCATCACAGGTCCACCCCCTGCACACCCCACCAGTTTTAACATCAACGAAAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGACCAGTAGGGCGAGCGAAGCGAGTCATCCTGCACGAACCACCAATAATGACGGTGGGTTCGGTGGAagta                                                                                                                                                                        >  2:499032/1‑299 (MQ=9)
                                                                                                  agtaTCCAGCGTAGTATCGGGTGAGTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGTAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGtt                                                                                                                                                                    <  2:157015/300‑1 (MQ=255)
                                                                                                   gtaTCCAGCGTAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTACCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGACGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGttt                                                                                                                                                                   >  1:34648/1‑300 (MQ=255)
                                                                                                     aTCCAGCGTAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTACCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTACCATCGAAGACAGGTGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTAATCCTGCACGACCCACCACTAATGACGGTGAGTTAGGTGGAAGTGGTTTgt                                                                                                                                                                 >  1:361882/1‑300 (MQ=255)
                                                                                                             tagtaTCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGATGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACCGGGTCGTTAGCTCAGTTGTTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTGAAGCGTGGAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATcc                                                                                                                                                          <  2:639020/299‑1 (MQ=255)
                                                                                                               gtaTCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAAtttcaaaatggctact                                                                                                                                                                                                                                                                                         >  1:721770/1‑163 (MQ=255)
                                                                                                                                  gCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACCGGGTCGTTAGCTCAGTTGGTCGAGCAGTTGACTTTTCATCAATTGGTCGCAGGTTCGAATCCCCCACGACCCACCAGTTTTCAAACCGAAGACAGATGTTAAGCGTGTAGGATACCGTTGCGTCAGCAACGGCCCGTAGGGCGCGCGACGCGAATCATACTGGATGAACAACCAATAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCCGCGGAGTATCGGGCGATTAGc                                                                                                                                    >  2:139980/1‑300 (MQ=17)
                                                                                                                                  gCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACAt                                                                                                                                                                                                                                                                                                >  1:409507/1‑150 (MQ=33)
                                                                                                                                  gCTGGGAGAGCACCTACCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAAtttcaaagt                                                                                                                                                                                                                                                                                                >  1:409880/1‑144 (MQ=255)
                                                                                                                                              ccTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTTCACGACCCACCAGTTTTAACATCGAAGGAAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCACTAAtaaaggt                                                                                                                                                                                          >  1:71521/1‑231 (MQ=255)
                                                                                                                                                 cccTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAAGCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTCACATCGAAAACAAATGTTAAGCGTGTAGGATCACGTTGCGTCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACccacca                                                                                                                                                                                                     >  2:698968/1‑223 (MQ=255)
                                                                                                                                                   cTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGACGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCTAGCGTAGTATCGGGTGATTAGCTCAGCTGGGAGAGCAcc                                                                                                                   >  1:66259/1‑300 (MQ=255)
                                                                                                                                                   cTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGCTAAGCGTGTAGGATAACGTTGCGTCAGCCACGGCCCATAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCAcc                                                                                                                   >  1:66337/1‑300 (MQ=255)
                                                                                                                                                           gaggGGGTCGGCGGTTCGATCCCGTCATCACCCACCACCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGTCAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACccaccaatcctaa                                                                                                                                                                                              >  2:338244/1‑213 (MQ=255)
                                                                                                                                                            atggggGCGGCGGTTCGATCCCGTCATCACCCACCACTGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTATGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAGCTAAGCGAGTc                                                                                                                                                                                                                       <  2:146721/192‑1 (MQ=255)
                                                                                                                                                             gggggTCGGCGGTTCGATCCCGTCACCACCCACCACCGGTTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACaa                                                                                                         <  1:736251/300‑1 (MQ=255)
                                                                                                                                                                     gcggTTCGATCCCGTCATCACCCACCACCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCACTAATGACGGTGGTTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGgaga                                                                                                                        <  2:125507/277‑1 (MQ=255)
                                                                                                                                                                                 cGTCATCACCCACCACCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGAACCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTNGCGTCAGCCACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCACTCCTGAAGGTTGGTTCAGTGGAAGTAGttt                                                                                                                                                                   >  2:527740/1‑222 (MQ=17)
                                                                                                                                                                                   tcaccacccaccACCGGGTCNTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAANCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAggg                                                                                                                                                                                                                                        <  2:564718/152‑1 (MQ=255)
                                                                                                                                                                                     atcaCCCAACACCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAg                                                                                                                                                                                                                                                                                                         <  2:522051/90‑1 (MQ=255)
                                                                                                                                                                                     accacccaccACCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAAc                                                                                                                                                                                                                                                                 <  1:196728/127‑1 (MQ=255)
                                                                                                                                                                                      tcaCCCACCACTGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTgtag                                                                                                                                                               <  2:176636/221‑1 (MQ=255)
                                                                                                                                                                                      tcaCCCACCACCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTCTAACCCCAAAGACAGATGTCACACGCGTAAGATAACGCCGCGCCCGCCCCGGCACATAGAGCGAGCGCAGCAAGCCCTCCCGCACGACCCACCAATAATGAAGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGGAGTATCGGGTGATTCGATCAGCTGGGAGAGCACATCCCTTACAAAGCGGGGGTAGGCGGGTCGATccc                                                                                 >  2:702538/1‑299 (MQ=16)
                                                                                                                                                                                        actcaccacTGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGt                                                                                                                                                                                                                                                               <  2:594440/125‑1 (MQ=255)
                                                                                                                                                                                        acccaccATCGGGTCGTTAGCTCAGTTGGTAGAGCAGGCGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAagg                                                                                                       <  1:229342/275‑1 (MQ=255)
                                                                                                                                                                                        acccaccAGCGGTTCGTTAACTCAGTTGGTAGAGCAGTTGACTTGTAATCAATGGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTCCAACATTGAAAACAGAGGTTAAACGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGtc                                                                              <  1:750128/300‑1 (MQ=25)
                                                                                                                                                                                        aaccaacaatcGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGa                                                                                                                                                                                                                                                                                     <  2:175725/97‑1 (MQ=255)
                                                                                                                                                                                         acaaaaaatcGGGTCGTTAGCTCAGTTGGTAGAGCAGTTNACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCAc                                                                                                                                                                                                              <  2:536885/166‑1 (MQ=255)
                                                                                                                                                                                            aaaaatcGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTCGTGACATTGGAAGCAGGGGTTAAGCGTGGAGGATAACGTTGCGTTAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTccc                                                                                                               <  2:10671/258‑1 (MQ=21)
                                                                                                                                                                                                      tCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGGTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACt                                                                 <  1:499032/300‑1 (MQ=255)
                                                                                                                                                                                                      tCGTTAGCTCAGTTGGTAAAGCAGGTGACTTTTAATCAATTGGTCGCAGTTTCGAATCCTGCACGACCCACCAGTTTTAACATTGAAGACAGACTTTAAGCGTGTAGGATACCGTTGCGTCACCAACGGCCCGTAGGGCGAGCGAAGCGAGTCACCATGTACGGTTAACTACCGGGGGCGAGGGGGTGGGTGGAAGGGGTGGGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACt                                                                 <  1:498957/300‑1 (MQ=18)
                                                                                                                                                                                                      tCGTTAGCTCAGTTGGGAGANCAGTTGACTTTTAATCAATTGGTCACAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAATACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCACTAATTACGGTGGGtt                                                                                                                                                                                    <  2:222519/187‑1 (MQ=255)
                                                                                                                                                                                                                                      ttAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCTATCGACTCGATTCATCCCGCACGACCNACCCATAGTACAGTTCAGCTCATTGAAAATCGTTTTCAGTATCTATCGTCGTATCGGATGATTAGCTCAGCTGGGAGAGCACCTCCATTAAAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGtt                                   >  2:538952/1‑299 (MQ=16)
                                                                                                                                                                                                                                           gcgagatgtgtataagagacagcTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAGCGAAGTGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTCCAAAGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGTTTAGTTGGTAGAGCAGTTGACttt                             >  1:511812/23‑300 (MQ=37)
                                                                                                                                                                                                                                            aaTTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGCTTTAACATCGAAGACAGATGGGGAGCGTGGAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACccaccatcctgaat                                                                                                                                                                                             <  2:66869/144‑9 (MQ=14)
                                                                                                                                                                                                                                                ggTCGCAGGTTCGAATCCTGCACGATCCACCGGGGTTAATGGCGAAGACAGATGTGAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTGGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGGGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATc                        <  1:721944/300‑1 (MQ=25)
                                                                                                                                                                                                                                                      aGGTTCGAATCCGGCACGACCCACCAGTTTTAACAGCGAAGACAGATTTTAATCGTGTAGGATAACGTTGCGTCAGCGACGGCCCTTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCGCCATTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTAt                                                                                                                                                <  2:343890/174‑1 (MQ=21)
                                                                                                                                                                                                                                                         ttCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTc                >  1:367640/1‑299 (MQ=255)
                                                                                                                                                                                                                                                                 cTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGgcgagcgga                                                                                                                                                                                                                               >  1:214008/1‑86 (MQ=255)
                                                                                                                                                                                                                                                                 cTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAGCTAAGCGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCAc                                                                                                                    <  2:406812/191‑1 (MQ=255)
                                                                                                                                                                                                                                                                 cTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCCGCTGGGCGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCAGTCATCAACCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTc        >  2:423587/1‑299 (MQ=255)
                                                                                                                                                                                                                                                                 cTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCAc                                                                                                                    <  2:407105/191‑1 (MQ=255)
                                                                                                                                                                                                                                                                 cTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCAc                                                                                                                    >  1:407105/1‑191 (MQ=255)
                                                                                                                                                                                                                                                                 cTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCAc                                                                                                                    >  1:406812/1‑191 (MQ=255)
                                                                                                                                                                                                                                                                      cGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGAACCACCACTAATGACGGTGGGTTCGGTGGAAGTCGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTACCTTAAAAGGAGGGGGTAGGCGGTTCGATCCCGTAATCACCCACCACTAGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATcc  >  1:596231/1‑300 (MQ=255)
                                                                                                                                                                                                                                                                       gACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTTTAGGATAACATTGCTTCAGCAACGTCCCTTATTTCCATCGAAGCGAGTCATCATGCACGACCCACCACTCTTTATGGGTGTTTCGGGGGAGTGGAGGTGTGGAGAAT‑‑AGAAAAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATcc  <  1:699894/299‑1 (MQ=9)
                                                                                                                                                                                                                                                                       gACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGANCGAAGCGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATcc  <  1:139980/299‑1 (MQ=255)
                                                                                                                                                                                                                                                                               |                                                                                                                                                                                                                                                                                                        
TAGTAAAACGTGAAGGATAACGTTGCATGAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCACTAACATAGTTAGTTGTAGTATCCAGCGTAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCC  >  NC_000913/780649‑781208

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.