| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,848,300 | 2 bp→TT | coding (376‑377/552 nt) | ydjA ← | putative oxidoreductase YdjA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,848,300 | 0 | C | T | 100.0% | 178.5 / NA | 56 | G126K (GGG→AAG) | ydjA | putative oxidoreductase YdjA |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (27/29); total (27/29) | |||||||||||
| * | NC_000913 | 1,848,301 | 0 | C | T | 98.2% | 178.3 / NA | 56 | G126K (GGG→AAG) | ydjA | putative oxidoreductase YdjA |
| Reads supporting (aligned to +/- strand): ref base C (0/1); new base T (27/28); total (27/29) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
ATCCGGGTATGGTAACCCTCATTCCGTGAAGTGATAAGTGAGAGTGTCTGAATTCCTGCGCCTTTGCTCACAATCCAGACAGTTTCGCGACAATTATCAGAAATAAGTTACAAACGGC‑GTCGGGT‑CCGGGACGTTAATCGACG‑TAGATGC‑TTTCAGCTGCGGCGTACCGAGGTAGAGAAAACCGACAATTTTATCCTGCTCACGGCAACCGAATGCTTCACGCACTACCGGACTTTCAGTTAATGCGCCACTGCGCCAGATGCCGCCAAACCCCTGGGCAACTGCTGCCATTTGCATCGCCATGACCGCGCATCCGGCAGACATTTCCTGTTCCCAGCGCGGGACTTTATGATTCTCTTCGCATTTCGCCACCACCGTGATGATGAGCGGTGCGCGGAACGGCGCATTACGGGCTTTGTCGATAGCTTTGTCATCACTACCGGCAGCAATCGCCCCCTGTTCCAGTACGGCGCTGAAACGCTCGCGCCCTTCCCCTTCAATCACAAAAAAATGCCACGGTTGCATGGACTTATGGTCCGGCGCACGCATACCCGCACGC > NC_000913/1848029‑1848587 || aTCCGGGTATGGTAGCCCTCATTCCGTGAAGTGATAAGTGAGAGTGTCTGAATTCCTGCGCCTTTGCTCACAATCCAGACAGTTTCGCGACAATTATCAGAAATAAGTTACAAACGGC‑GTCGGGT‑CCGGGACGTTAATCGACG‑TAGATGC‑TTTCAGCTGCGGCGTACCGAGGTAGAGAAAACCGACAATTTTATCCTGCTCACGGCAAACGAATGCTTAACGCACTACCGGACTTTCAGTTAATGCGCCACTGCGCCAGATGCCGCCAAACTTCTGGGCAACTGCTGCCATTTGCATc > 1:273987/1‑298 (MQ=255) gggTATGGTAACCCTCATTCCGTGAAGTGATAAGTGAGAGTGTCTGAATTCCTGCGCCTTTGCTCACAATCCAGACAGTTTCGCGACAATTATCAGAAATAAGTTACAAACGGC‑GTCGGGT‑CCGGGACGTTAATCGACG‑TAGATGC‑TTTCAGCTGCGGCGTACCGAGGTAGAGAAAACCGACAATTTTATCCTGCTCACGGCAACCGAATGCTTCACGCACTACCGGACTTTCAGTTAATGCGCCAATGCGCCAGATGCCGCCAAACTTCTGGGCAACTGCTGCCATTTGCATCGCCAt > 2:587783/1‑299 (MQ=255) tGGTAACCCTCATTCCGTGAAGTGATAAGTGAGAGTGTCTGAATTCCTGCGCCTTTGCTCACAATCCAGACAGTTTCGCGACAATTATCAGAAATAAGTTACAAACGGC‑GTCGGGT‑CCGGGACGTTAATCGACG‑TAGATGC‑TTTCAGCTGCGGCGTACCGAGGTAGAGAAAACCGACAATTTTATCCTGCTCACGGCAACCGAATGCTTCACGCACTACCGGACTTTCAGTTAATGCGCCACTGCGCCAGATGCCGCCAAACTTCTGGGCAACTGCTGCCATTTGCATCGCCATGACcgc > 2:545168/1‑300 (MQ=255) tGGTAACCCTCATTCCGTGAAGTGATAAGTGAGAGTGTCTGAATTCCTGCGCCTTTACTCACAATCCAGACAGTTTCGCGACAATTATCAGAAATAAGTTACAAACGGC‑GTCGGGT‑CCGGGACGTTAATCGACG‑TAGATGC‑TTTCAGCTGCGGCGTACCGAGGTAGAGAAAACCGACAATTTTATCCTGCTCACGGCAACCGAATGCTTCACGCACTACCGGACTTTCAGTTAATGTGCCACTGCGCCAGATGCCGCCAAACTTATGGGCAACTGCTGCCATTTGCATCGACATGAcc > 2:448856/1‑298 (MQ=255) cccTCATTCCGTGAAGTGATAAGTGAGAGTGTCTGAATTCCTGCGCCTTTGCTCACAATCCAGACAGTTTCGCGACAATTATCAGAAATAAGTTACAAACGGC‑GTCGGGT‑CCGGGACGTTAATCGACG‑TAGATGC‑TTTCAGCTGCGGCGTACCGAGGTAGAGAAAACCGACAATTTTATCCTGCTCACGGCAACCGAATGCTTCACGCACTACCGGACTTTCAGTTAATGCGCCACTGCGCCAGATGCCGCCAAACTTCTGGGCAACTGCTGCCATTTGCATCGCAATGAACGCGCATcc > 1:109805/1‑300 (MQ=255) tCCGTGAAGTGATAAGTGAGAGTGTCTGAATTCCTGCGCCTTTGCTCACAATCCAGACAGTTTCGCGACAATTATCAGAAATAAGTTACAAACGGC‑GTCGGGT‑CCGGGACGTTAATCGACG‑CAGATGC‑TTTCAGCTGCGGCGTACCGAGGTAGAGAAAACCGACAATTTTATCCTGCTCACGGCAACCGACTGCTTCACGCACTCCCGGACTTTCAGTTAATGCGCCACTGCGCCAGATGCCGACAAACTTCTGGGCAACTGCTGCCATTTGCATCGACATGAAcgcgtat > 2:637256/1‑288 (MQ=255) tGAATTGATAAGTGAGAGTGTCTGAATTCCTGCGCCTTTGCTCACAATCCAGACAGTTTCGCGACAATTATCAGAAATAAGTTACAAACGGC‑GTCGGGT‑CCGGGACGTTAATCGACG‑TAGATGC‑TTTCAGCTGCGGCGTACCGAGGTAGAGAAAACCGACAATTTTATCCTGCTCACGGCAACCGAATGCTTCACGCACTACCGGACTTTCAGTTAATGCGCCACTGCGCCAGATGCCGCCAAACTTCTGGGCAACTGCTGCCATTTGCATCGCCATGACCGCGCATCCGGCAGACAtt < 2:328852/299‑1 (MQ=255) gATAAGTGAGAGTGTCTGAATTCCTGCGCCTTTGCTCACAATCCAGACAGTTTCGCGACAATTATCAGAAATAAGTTACAAACGGC‑GTCGGGT‑CCGGGACGTTAATCGACG‑TAGATGC‑TTTCAGCTGCGGCGTACCGAGGTAGAGAAAACCGACAATTTTATCCTGCTCACGGCAACCGAATGCTTCACGCACTACCGGACTTTCAGTTAATGCGCCACTGNGCCAGATGCCGCCAAACTTCTGGGCAACTGCTGCCATTTGCATCGCCATGACCGCGCATCCGGCAGACATTTCCTGtt > 1:481322/1‑300 (MQ=255) gATAAGTGAGAGTGTCTGAATTCCTGCGCCTTTGCTCACAATCCAGACAGTTTCGCGACAATTATCAGAAATAAGTTACAAACGGC‑GTCGGGT‑CCGGGACGTTAATCGACG‑TAGATGC‑TTTCAGCTGCGGCGTACCGAGGTAGAGAAAACCGACAATTTTATCCTGCTCACGGCAACCGAATGCTTCACGCACTACCGGACTTTCAGTTAATGCGCCACTGCGCCAGATGCCGCCAAACTTCTGGGCAACTGCTGCCATTTGCATCGCCATGACCGCGCATCCGGCAGACATTTCCTGtt > 1:259545/1‑300 (MQ=255) gATAAGTGAGAGTGTCTGAATTCCTGCGCCTTTGCTCACAATCCAGACAGTTTAGCGACAATTATCAGAAATAAGCTACAAACGGC‑GTCGGAT‑CCGGGACGTTAATCGACG‑TAGATGC‑TTTCAGCTGCGGCGTACCGAGGTAGAGAAAACCGACAATTTTATCCTGCTCACGGCAACCGAATGCTTCACGCACTAACGGACTTTCAGTTAATGCGCCACTGCGCCAGATGCCGCCAAACTTCTGGGCAACTGCTGCCATTTGCATCGCCGTGACCGCGCATCCGGTAGACATTTCCTGtt > 1:259534/1‑300 (MQ=255) aaGTGAGAGTGTCTGAATTCCTGCGCCTTTGCTCACAATCCAGACAGTTTCGCGACAATTATCAGAAATAAGTTACAAACGGC‑GTCGGGT‑CCGGGACGTTAATCGACG‑TAGATGC‑TTTCAGCTGCGGCGTACCGAGGTAGAGAAAACCGACAATTTTATCCTGCTCACGGCAACCGAATGCTTCACGCACTAACGGACTTTCAGTTAATGCGCCACTGCGACAGATGCCGCCAAACTTCTGGGCAACTGCTGCCATTTGCATCGCCCTGACCGCGCATCCGGCAGACATTTCCTGTTccc > 2:472026/1‑300 (MQ=255) gagaGTGTCTGAATTCCTGCGCCTTTGCTCACAATCCAGACAGTTTCGCGACAATTATCAGAAATAAGTTACAAACGGC‑GTCGGGT‑CCTGGACGTTAATCGACG‑TAGATGC‑TTTCAGCTGCGGCGTACCGAGGTAGAGAAAACCGACAATTTTATCCTGCTCACGGCAACCGAATGCTTCACGCACTACCGGACTTTCAGTTAATGCGCCACTGCGCCAGATGCCGCCAAACTTCTGGGCAACTGCTGCCATTTGCATCGCCATGACCGCGCATCCGGCAGACATTTCCTGTTCCCAgcg < 2:592813/300‑1 (MQ=255) gtCTGAATTCCTGCGCCTTTGCTCACAATCCAGACAGTTTCGCGACAATTATCAGAAATAAGTTACAAACGGC‑GTCGGGT‑CCTGGACGTTAATCGACG‑TAGATGC‑TTTCAGCTGCGGCGTACCGAGGTAGAGAAAACCGACAATTTTATCCTGCTCACGGCAACCGAATGCTTCACGCACTACCGGACTTTCAGTTAATGCGCCACTGCGCCAGATGCCGCCAAACTTCTGGGCAACTGCTGCCATTTGCATCGCCATGACCGCGCATCCGGCAGACATTTCCTGTTCCCAGCGCGGGAc < 2:548273/300‑1 (MQ=255) tCCTGCGCCTTTGCTTACAATCCAGACAGTTTCGCGACAATTATCAGAAATAAGTTACAAACGGC‑TTCTGGT‑CCTGGACGTTAATCGACG‑TAGATGC‑TTTCAGCTGCGGCGTACCGAGGTAGAGAAAACCGACAATTTTATCCTGCTCACGGCAACCGAATGCTTCACGCACTACCGGACTTTCAGTTAATGCGCCACTGCGCCAGATGCCGCCAAACTTCTGGGCAACTGCTGCCATTTGCATCGCCATGACCGCGCATCCGGCAGACATTTCCTGTTCCCAGCGCGGGACTTTATGAt < 2:55872/300‑1 (MQ=255) tCCTGCGCCTTTGCTCACAATCCAGACAGTTTCGCGACAATTATCAGAAATAAGTTACAAACGGC‑GTCGGGT‑CCGGGACGTTAATCGACG‑TAGATGC‑TTTCAGCTGCGGCGTACCGAGGTAGAGAAAACCGACAATTTTATCCTGCTCACGGCAACCGAATGCTTCACGCACTACCGGACTTTCAGTTAATGCGCCACTGCGCCAGATGCCGCCAAACTTCTGGGCAACTGCTGCCATTTGCATCGCCATGACCGCGCATCCGGCAGACATTTCCTGTTCCCAGCGCGGGACTTTATGAt < 1:624529/300‑1 (MQ=255) aTCCAGACAGTTTCGCGACAATTATCAGAAATAAGTTACAAACGGC‑GTCGGGT‑CCGGGACGTTAATCGACG‑TAGATGC‑TTTCAGCTGCGGCGTACCGAGGTAGAGAAAACCGACAATTTTATCCTGCTCACGGCAACCGAATGCTTCACGCACTACCGGACTTTCAGTTAATGCGCCACTGCGCCAGATGCCGCCAAACTTCTGGGCAACTGCTGCCATTTGCATCGCCATGACCGCGCATCCGGCAGACATTTCCTGTTCCCAGCGCGGGACTTTATGATTCTCTTCGCATTTCGccac > 2:467803/1‑300 (MQ=255) aTCCAGACAGTTTCGCGACAATTATCAGAAATAAGTTACAAACGGC‑GTCGGGT‑CCGGGACGTTAATCGACG‑TAGATGC‑TTTCAGCTGCGGCGTACCGAGGTAGAGAAAACCGACAATTTTATCCTGCTCACGGCAACCGAATGCTTCACGCACTACCGGACTTTCAGTTAATGCGCCACTGCGCCAGATGCCGCCAAACTTCTGGGCAACTGCTGCCATTTGCATCGCCATGACCGCGCATCCGGCAGACATTTCCTGTTCCCAGCGCGGGACTTTATGATTCTCTTCGCATTTCGccac < 1:587783/300‑1 (MQ=255) gcgACAATTATCAGAAATAAGTTACAAACGGC‑GTCTGGT‑CCGGGACGTTAATCGACG‑TAGATGC‑TTTCAGCTGCGGCGTATCTAGGTAGAGAAAACCGACAATTTTATCCTGCTCACGGCAACCGAATGCTTCACGCACTACCGGACTTTCAGTTAATGCGCCACTGCGCCAGATGCCGCCAAACTTCTGGGCAACTGCTGCCATTTGCATCGCCATGACCGCGCATCCGGCAGACATTTCCTGTTCCCAGCTCTGGACTTTATGATTCTTTGAGTATGTCGCCACCACCGggatgatg < 2:257823/299‑1 (MQ=255) aCAATTATCAGAAATAAGCTACAAACGGCCGTCGGGT‑CCTGGACGCTAATCGACG‑TAGATGC‑TTTCAGCTGCGGCGTACCGAGGTAGAGAAAACCGACAATTTTATCCTGCTCACGGCAACCGAATGCTTCACGCACTACCGGACTTTCAGTTAATGCGCCACTGCGCCAGATGCCGCCAAACTTCTCGGCAACTGCTGCCATTTGCATCGCCATGACCGCGCATCCGGCAGACATTTCCTGTTCCCAGCGCGGGACTTTATGATTCTCTTCGCATTTTGCCACCACCGGGATGATGAGc < 2:561358/300‑1 (MQ=255) aaaTAAGCTACAAACGGC‑GTCGGGT‑CCGGGACGTTAATCGACG‑TAGATGC‑TTTCAGCTGCGGCGTACCGAGGTAGAGAAAACCGACAATTTTATCCTGCTCACGGCAACCGAATGCTTCACGCACTACCGGACTTTCAGTTAATGCGCCACTGCGCCAGATGCCGCCAAACTTCTGGGCAACTGCTGCCATTTGCATCGCCATGACCGCGCATCCGGCAGACATTTCCTGTTCCCAGCGCTGGACTTTATTATTCTCTTCGCATGTCGCCACCACCGGGATGATGAGCGGTGCGCGGAAc < 2:360800/300‑1 (MQ=255) acaagaCGGC‑TTCGGGTNCCGGGACGTTAATCGACGNTAGATGCCTTTCAGCTGCGGCGTACCGAGGTAGAGAAAACCGACAATTTTATCCTGCTCACGGCAACCGAATGCTTCACGCACTACCGGACTTTCAGTTAATGCGCCACTGCGCCAGATGCCGCCAAACTTCTGGGCAACTGCTGCCATTTGCATCGCCATGACCGCGCATCCGGCAGACATTTCCTGTTCCCAGCGCGGGACTTTATGATTCTCTTCGCATTTCGCCACCACCGTGATGATGAGCNGTGCGCGGAACGgcgc < 1:560996/295‑1 (MQ=255) acaagaCGGC‑GTCGGGTNCCGGGACGTTAATCGACGNTAGGTGCACTTCAGCTGCGGCGTACCGAGGTAGAGAAAACCGACAATTTTATCCTGCTCACGGCAACCGAATGCTTCACGCACTACCGGACTTTCAGTTAATGCGCCACTGCGCCAGATGCCGCCAAACTTCTGGGCAACTGCTGCCATTTGCATCGCCATGACCGCGCATCCGGCAGACATTTCCTGTTCCCAGCGCGGGACTTTATGATTCTCTTCGCATTTCGCCACCACCGTGATGATGAGCNGTGCGCGGAACGgcgc < 1:561000/295‑1 (MQ=255) aCGGC‑GTCGGGT‑CCTGGACGTTAATCGACG‑TAGATGC‑TTTCAGCTGCGGCGTACCGAGGTAGAGAAAACCGACAATTTTATCCTGCTCACGGCAACCGAATGCTTCACGCACTACCGGACTTTCAGTTAATGCGCCACTGCGCCAGATGCCGCCAAACTTCTGGGCAACTGCTGCCATTTGCATCGCCATGACCGCGCATCCGGCAGACATTTCCTGTTCCCAGCGCGGTACTCTATGATTCTCTTCGCATTTCGCCACCACCGGGATGATGAGCGGTGCGCGGAACGGCGCATTACggg < 2:356664/300‑1 (MQ=255) aCGGC‑GTCGGGT‑CCGGGACGTTAATCGACG‑TAGATGC‑TTTCAGCTGCGGCGTACCGAGGTAGAGAAAACCGACAATTTTATCCTGCTCACGGCAACCGAATGCTTCACGCACTACCGGACTTTCAGTTAATGCGCCACTGCGCCAGATGCCGCCAAACTTCTGGGCAACTGCTGCCATTTGCATCGCCATGACCGCGCATCCGGCAGACATTTCCTGTTCCCAGCGCGGGACTTTATGATTCTCTTCGCATTTCGCCACCACCGGGATGATGAGCGGTGCGCGGAACGGCGCATTACggg < 2:356781/300‑1 (MQ=255) ggC‑GTCGGGT‑CCGGGACGTTAATCGACG‑TAGATGC‑TTTCAGCTGCGGCGTACCGAGGTAGAGAAAACCGACAATTTTATCCTGCTCACGGCAACCGAATGCTTCACGCACTACCGGACTTTCAGTTAATGCGCCACTGCGCCAGATGCCGCCAAACTTCTGGGCAACTGCTGCCATTTGCATCGCCATGACCGCGCATCCGGCAGACATTTCTTGTTCCCAGCGCTGGACTTTATGATTCTCTTCGCATTTCGCCACCACCTTGATGATGAGCGGTGCGCGGAACGGCGCATTACGGGc < 1:267040/299‑1 (MQ=255) ggT‑CCGGGACGTTAATCGACG‑TAGATGC‑TTTCAGCTGCGGCGTACCGAGGTAGAGAAAACCGACAATTTTATCCTGCTCACGGCAACCGAATGCTTCACGCACTACCGGACTTTCAGTTAATGCGCCACTGCGCCAGATGCCGACAAACTTCTGGGCAACTGCTGCCATTTGCATCGCCATGACCGCGCATCCGGCAGACATTTCCTGTTCCCAGCGCGGGACTTTATGATTCTCTTCGCATTTCGCCACCACCGTGATGATGAGCGGTGCGCGGAACGGCGCATTACGGGCTTTGTCGa > 1:17331/1‑300 (MQ=255) gACG‑TAGATGC‑TTTCAGCTGCGGCGTACCGAGGTAGAGAAAACCGACAATTTTATCCTGCTCACGGCAACCGAATGCTTCACGCACTACCGGACTTTCAGTTAATGCGCCACTGCGCCAGATGCCGCCAAACTTCTGGGCAACTGCTGCCATTTGCATCGCCATGACCGCGCATCCGGCAGACATTTCCTGTTCCCAGCGCGGGACTTTATGATTCTCTTCGCATTTCGCCACCACCGTGATGATGAGCGGTGCGCGGAACGGCGCATTACGGGCTTTGTCGATAGCTTTGTCATCACt < 1:263845/299‑1 (MQ=255) aCG‑TAGATGC‑TTTCAGCTGCGGCGTACCGAGGTAGAGAAAACCGACAATTTTATCCTGCTCACGGCAACCGAATGCTTCACGCACTACCGGACTTTCAGTTAATGCGCCACTGCGCCAGATGCCGCCAAACTTCTGGGCAACTGCTGCCATTTGCATCGCCATGACCGCGCATCCGGCAGACATTTCCTGTTCCCAGCGCTGTACTTTATGATTCTCTTCGCATTTCGCCACCACCGTGATGATGAGCGGTGCGCGGAACGGCGCATTACGGGCTTTGTCGATAGCTTTGTCATCACt < 2:166271/298‑1 (MQ=255) aCG‑TAGATGC‑TTTCAGCTGCGGCGTACCGAGGTAGAGAAAACCGACAATTTTATCCTGCTCACGGCAACCGAATGCTTCACGCACTACCGGACTTTCAGTTAATGCGCCACTGCGCCAGATGCCGCCAAACTTCTGGGCAACTGCTGCCATTTGCATCGCCATGACCGCGCATCCGGCAGACATTTCCTGTTCCCAGCGCGGGACTTTATGATTCTCTTCGCATTTCGCCACCACCGTGATGATGAGCGGTGCGCGGAACGGCGCATTACGGGCTTTGTCGATAGCTTTGtcatcaataa > 1:545041/1‑296 (MQ=255) aCG‑TAGATGC‑TTTCAGCTGCGGCGTACCGAGGTAGAGAAAACCGACAATTTTATCCTGCTCACGGCAACCGAATGCTTCACGCACTACCGGACTTTCAGTTAATGCGCCACTGCGCCAGATGCCGCCAAACTTCTGGGCAACTGCTGCCATTTGCATCGCCATGACCGCGCATCCGGCAGACATTTCCTGTTCCCAGCGCGGGACTTTATGATTCTCTTCGCATTTCGCCACCACCGTGATGATGAGCGGTGCGCGGAACGGCGCATTACGGGCTTTGTCGATAGCTTTGTCATCACTAc > 1:545051/1‑300 (MQ=255) gC‑TTTCAGCTGCGGCGTACCGAGGTAGAGAAAACCGACAATTTTATCCTGCTCACGGCAACCGAATGCTTCACGCACTACCGGACTTTCAGTTAATGCGCCACTGCGCCAGATGCCGCCAAACTTCTGGGCAACTGCTGCCATTTGCATCGCCATGACCGCGCATCCGGCAGACATTTCCTGTTCCCAGCGCGGGACTTTATGATTCTCTTCGCATTTCGCCACCACCGTGATGATGAGCGGTGCGCGGAACGGCGCATTACGGGCTTTGTCGATAGCTTTGTCATCACTACCGgcagca > 1:406056/1‑300 (MQ=255) cAGCTGCGGCGTACCGAGGTAGAGAAAACCGACAATTTTATCCTGCTCACGGCAACCGAATGCTTCACGCACTACCGGACTTTCAGTTAATGCGCCACTGCGCCAGATGCCGCCAAACTTCTGGGCAACTGCTGCCATTTGCATCGCCATGACCGCGCATCCGGCAGACATTTCCTGTTCCCAGCGCGGGACTTTATGATTCTCTTCGCATTTCGCCACCACCGTGATGATGAGCGGTGCGCGGAACGGCGCATTACGGGCTTTGTCGATAGCTTTGTCATCACTACCGGCAGCAATCGc > 2:363419/1‑300 (MQ=255) tGCGGCGTACCGAGGTAGAGAAAACCGACAATTTTATCCTGCTCACGGCAACCGAATGCTTCACGCACTACCGGACTTTCAGTTAATGCGCCACTGCGCCAGATGCCGCCAAACTTCTGTGCAACTGCTGCCANTTGCATCGCCATTACCGCGCATCCTGCAGACATTTCCTGTTCCCAGCGCGGGACTTTATGATTCTCTTCGCATTTCGCCACCACCGGGATGATGAGCGGTGCGCGGAACGGCGCATTACGGGCTTTGTCGATAGCTTTGTCATCACTACCGGCAGCAATCGccccc < 2:216277/300‑1 (MQ=255) gTACCGAGTTAGAGAAAACCGACAATTTTATCCTGCTCACGGCAACCGAATGCTTCACGCACTACCGGACTTTCAGTTAATGCGCCACTGCGCCAGATGCCGCCAAACTTCTGGGCAACTGCTGCCATTTGCATCGCCATGACCGCGCATCCGGCAGACATTTCCTGTTCCCAGCGCGGGACTTTATGATTCTCTTCGCATTTCGCCACCACCGTGATGATGAGCGGTGCGCGGAACGGCGCATTACGGGCTTTGTCGATAGCTTTGTCATCACTACCGGCAGCAATCGCCCCCTGTTcc < 1:616179/300‑1 (MQ=255) gTACCGAGGTAGAGAAAACCGACAATTTTATCCTGCTCACGGCAACCGAATGCTTCACGCACTACCGGACTTTCAGTTAATGCGCCACTGCGCCAGATGCCGCCAAACTTCTGGGCAACTGCTGCCATTTGCATCGCCATGACCGCGCATCCGGCAGACATTTCCTGTTCCCAGCGCGGGACTTTATGATTCTCTTCGCATTTCGCCACCACCGTGATGATGAGCGGTGCGCGGAACGGCGCATTACGGGCTTTGTCGATAGCTTTGTCATCACTACCGGCAGCAATCGCCCCCTGTTcc < 1:616174/300‑1 (MQ=255) gCTCACGGCAACCGAATGCTTCACGCACTACCGGACTTTCAGTTAATGCGCCACTGCGCCAGATGCCGCCAAACTTCTGGGCAACTGCTGCCATTTGCATCGCCATGACCGCGCATCCGGCAGACATTTCCTGTTCCCAGCGCGGGACTTTATGATTCTCTTCGCATTTCGCCACCACCGTGATGATGAGTGGTGCGCGGAACGGCGAATTACGGGCTTTGTCGATAGCTTTGTCATCACTAACGGCAGCAATCGCCCCCTGTTCCAGCACAGCGCTGAAACGCTTGCGcccctcccctt > 2:435342/1‑300 (MQ=255) cACGGCAACCGAATGCTTCACGCACTACCGGACTTTCAGTTAATGCGCCACTGCGCCAGATGCCGCCAAACTTCTGGGCAACTGCTGCCATTTGCATCGCCATGACCGCGCATCCGGCAGACATTTCCTGTTCCCAGCGCGGGACTTTATGATTCTCTTCGCATTTCGCCACCACCGTGATGATGAGCGGTGCGCGGAACGGCGCATTACGGGCTTTGTCGATAGCTTTGTCATCACTACCGGCAGCAATCGCCCCCTGTTCCAGTACGGCGCTGAAACGCTCGCGCCCTTCCCCTTCaa > 1:160718/1‑300 (MQ=255) aCGGCAACCGAATGCTTCACGCACTACCGGACTTTTAGTTAATGCGCCACTGCGCCAGATGCCGCCAAACTTCTGGGCAACTGCTGCCATTTGCATCGCCATGACCGCGCATCCGGCAGACATTTCCTGTTCCCAGCGCTGGACTTTAGGATTCTCTTCGCATTTCGCCACCACCGTGATGATGAGCGGTGCGCGGAACGGCGCATTACGGGCTTTGTCGATAGCTTTGTCATCACTACCTGCAGCAATCGCCCCCTGTTCTAGTACGGCGCTGAAACGCTCGCGCCCTTCCCCTTCAAt < 1:26794/300‑1 (MQ=255) aCGGCAACCGAATGCTTCACGCACTACCGGACTTTCAGTTAATGCGCCACTGCGCCAGATGCCGCCAAACTTCTGGGCAACTGCTGCCATTTGCATCGCCATGACCGCGCATCCGGCAGACATTTCCTGTTCCCAGCGCGGGACTTTATGATTCTCTTCGCATTTCGCCACCACCGTGATGATGAGCGGTGCGCGGAACGGCGCATTACGGGCTTTGTCGATAGCTTTGTCATCACTACCGGCAGCAATCGCCCCCTGTTCCAGTACGGCGCTGAAACGCTCGCGCCCTTCCCCTTCAAt < 1:26784/300‑1 (MQ=255) cGAATGCTTAACGCACTACCGGACTTTCAGTTAATGCGCCACTGCGCCAGATGCCGCCAAACTTCTGGGCAACTGCTGCCATTTGCATCGCCATGACCGCGCATCCGGCAGACATTTCCTGTTCCCAGCGCGGGACTTTATGATTCTCTTCGCATTTCGCCACCACCGtgatgatga > 2:176492/1‑177 (MQ=255) gCTTCACGCACTACCGGACTTTCAGTTAATGCGCCACTGCGCCAGATGCCGCCAAACTTCTGGGCAACTGCTGCCATTTGCATCGCCATGACCGCGCATCCGGCAGACATTTCCTGTTCCCAGCGCGGGACTTTATGATTCTCTTCGCATTTCGCCACCACCGTGATGATGAGCGGTGCGCGGAACGGCGCATTACGGGCTTTGTCGATAGCTTTGTCATCACTACCGGCAGCAATCGCCCCCTGTTCCAGTACGGCGCTGAAACGCTCGCGCCCTTCCCCTTCAATCACAAAAAAATGc > 1:645502/1‑300 (MQ=255) cTTCACGCACTACCGGACTTTCAGTTAATGCGCCACTGCGCCAGATGCCGCCAAACTTCTGGGCAACTGCTGCCATTTGCATCGCCATGACCGCGCATCCGGCAGACATTTCCTGTTCCCAGCGCGGGACTTTATGATTCTCTTCGCATTTCGCCACCACCGTGATGATGAGCGGTGCGCGGAACGGCGCATTACGGGCTTTGTCGATAGCTTTGTCATCACTACCGGCAGCAATCGCCCCCTGTTCCAGTACGGCGCTGAAACGCTCGCGCCCTTCCCCTTCAATCACAAAAAAATGcc > 1:218172/1‑300 (MQ=255) cTTCACGCACTACCGGACTTTCAGTTAATGCGCCACTGCGCCAGATGCCGCCAAACTTCTGGGCAACTGCTGCCATTTGCATCGCCATGACCGCGCATCCGGCAGACATTTCCTGCTCCCAGCGCGGGACTTTATGATTCTCTTCGCATTTCGCCACCACCGTGATGATGAGCGGTGCGCGGAACGGCGCATTACGGGCTTTGTCGATGGCTTTGt > 2:253302/1‑216 (MQ=255) aCCGGACTTTCAGTTAATGCGCCACTGCGCCAGATGCCGCCAAACTTCTGGGCAACTGCTGCCATTTGCATCGCCATGACCGCGCATCCGGCAGACATTTCCTGTTCCCAGCGCGGGACTTTATGATTCTCTTCGCATTTCGCCACCACCGTGATGATGAGCGGTGCGCGGAACGGCGCATTACGGGCTTTGTCGATAGCTTTGTCATCACTACCGGCAGCAATCGCCCCCTGTTCCAGTACGGCGCTGAAACGCTCGCGCCCTTCCCCTTCCATCACAAAAAAATGCCACGGTTGCAt > 2:616268/1‑299 (MQ=255) aCCGGACTTTCAGTTAATGCGCCACTGCGCCAGATGCCGCCAAACTTCTGGGCAACTGCTGCCATTTGCATCGCCATGACCGCGCATCCGGCAGACATTTCCTGTTCCCAGCGCGGGACTTTATGATTCTCTTCGCATTTCGCCACCACCGTGATGATGAGCGGTGCGCGGAACGGCGCATTACGGGCTTTGTCGATAGCTTTGTCATCACTACCGGCAGCAATCGCCCCCTGTTCCAGTACGGCGCTGAAACGCTCGCGCCCTTCCCCTTCAATCACAAAAAAATGCCACGGTTGCAt > 1:212708/1‑299 (MQ=255) cTTTCAGTTAATGCGCCACTGCGCCAGATGCCGCCAAACTTCTGGGCAACTGCTGCCATTTGCATCGCCATGACCGCGCATCCGGCAGACATTTCCTGTTCCCAGCGCGGGACTTTATGATTCTCTTCGCATTTCGCCACCACCGTGATGATGAGCGGTGCGCGGAACGGCGCATTACGGGCTTTGTCGATAGCTTTGTCATCACTACCGGCAGCAATCGCACCCTGTTCCAGTACGGCGCTGAAACGCTCGCGCCCTTCCCCTTCCATCACAAAAAAATGCCACGGTTGCATGGACTTa > 2:422363/1‑300 (MQ=255) tCAGTTAATGCGCCATTGCGCCAGATGCCGCCAAACTTCTGGGCAACTGCTGCCATTTGCATCGCCATGACCGCGCATCCGGCAGACATTTCCTGTTCCCAGCGCTGGACTTTATGATTCTCTTCGCATTTCGCCACCACCTTGATGATGAGCGGTGCGCGGAACGGCGCATTACGGGCTTTGTCGATAGCTTTGTCATCACTACCGGCAGCAATCGCCCCCTGTTCCAGTACGGCGCTGAAACGCTCGCGCCCTTCCCTTTCAATCACAAAAAAATGCCACGGTTGCATGGACTTATgg < 1:640320/300‑1 (MQ=255) tCAGTTAATGCGCCACTGCGCCAGATGCCGCCAAACTTCTGGGCAACTGCTGCCATTTGCATCGCCATGACCGCGCATCCGGCAGACATTTCCTGTTCCCAGCGCGGGACTTTATGATTCTCTTCGCATTTCGCCACCACCGTGATGATGAGCGGTGCGCGGAACGGCGCATTACGGGCTTTGTCGATAGCTTTGTCATCACTACCGGCAGCAATCGCCCCCTGTTCCAGTACGGCGCTGAAACGCTCGCGCCCTTCCCCTTCAATCACAAAAAAATGCCACGGTTGCATGGACTTATgg < 1:467803/300‑1 (MQ=255) tCAGTTAATGCGCCACTGCGACAGATGCCGCCAAACTTCTGTGCAACTGCTGCCATTTGCATCGCCATGACCGCGCATCCGGCAGACATTTCCTGTTCCCAGCGCGGGACTTTATGATTCTCTTCGCATTTCGCCACCACCGTGATGATGAGCGGTGCGCGGAACTGCGCATTACGGGCTTTGTCGATAGCTTTGTCATCACTACCGGCAGCAATCGCCCCCTGTTCCAGTACGGCGCTGAAACGCTCGCGCCCTTCCCCTTCAATCACAAAAAAATGCCACGGTTGCATGGACTTATgg < 2:273987/300‑1 (MQ=255) gTTAATGCGCCACTGCGCCAGATGCCGCCAAACTTCTGGGCAACTGCTGCCATTTGCATCGCCATGACCGCGCATCCGGCAGACATTTCCTGTTCCCAGCGCGGGACTTTATGATTCTCTTCGCATTTCGCCACCACCGTGATGATGAGCGGTGCGCGGAACGGCGCATTACGGGCTTTGTCGATAGCTTTGTCATCACTACCGGCAGCAATCGCCCCCTGTTCCAGTACGGCGCTGAAACGCTCGCGCCCTTCCCCTTCAATCACAAAAAAATGCCACGGTTGCATGGACTTATgg < 2:25440/297‑1 (MQ=255) gcgcCAGATGCCGCCANACTTCTGGGCAACTGCTGCCATTTGCATCGCCATGACCGCGCATCCGGCAGACATTTCCTGTTCCCAGCGCGGGACTTTATGATTCTCTTCGCATTTCGCCACCACCGTGATGATGAGCGGTGCGCGGAACGGCGCATTACGGGCTTTGTCGATAGCTTTGTCATCACTACCGGCAGCAATCGCCCCCTGTTCCAGTACGGCGCTGAAACGCTCGCGCCCTTCCCCTTCAATCACAAAAAAATGCCNCGGTTGCATGGACTTATGNTCCGGCGCACGCATAcc > 1:576645/1‑300 (MQ=255) gcgcCAGATGCCGCCAAACTTCTGGGCAACTGCTGCCATTTGCATCGCCATGACCGCGCATCCGGCAGACATTTCCTGTTCCCAGCGCGGGACTTTATGATTCTCTTCGCATTTCGCCACCACCGTGATGATGAGCGGTGCGCGGAACGGCGCATTACGGGCTTTGTCGATAGCTTTGTCATCACTACCGGCAGCAATCGCCCCCTGTTCCAGTACGGCGCTGAAACGCTCGCGCCCTTCCCCTTCAATCACAAAAAAATGCCACGGTTGCATGGACTTATgg < 2:461716/283‑1 (MQ=255) gcgcCAGATGCCGCCAAACTTCTGGGCAACTGCTGCCATTTGCATCGCCATGACCGCGCATCCGGCAGACATTTCCTGTTCCCAGCGCGGGACTTTATGATTCTCTTCGCATTTCGCCACCACCGTGATGATGAGCGGTGCGCGGAACGGCGCATTACGGGCTTTGTCGATAGCTTTGTCATCACTACCGGCAGCAATCGCCCCCTGTTCCAGTACGGCGCTGAAACGCTCGCGCCCTTCCCCTTCAATCACAAAAAAATGCCACGGTTGCATGGACTTATgg > 1:461716/1‑283 (MQ=255) aTGCCGCCAAACTTCTGGGCAACTGCTGCCATTTGCATCGCCATGACCGCGCATCCGGCAGACATTTCCTGTTCCCAGCGCTGGACTTTATGATTCTCTTCGCATTTTGCCACCACCTTGATGATGAGCGGTGCGCGGAACGGCGCATTACGGGCTTTGTCGATAGCTTTGTCATCACTACCGGCAGCAATCGCCCCCTGTTCCAGTACGGCGCTGAAACGCTCGCGCCCTTCCCCTTCAATCACAAAAAAATGCCACGGTTGCATGGACTTATGGTCCGGCGCACGCATACCcgcacgc < 2:259545/300‑1 (MQ=255) aTGCCGCCAAACTTCTGGGCAACTGCTGCCATTTGCATCGCCATGACCGCGCATCCGGCAGACATTTCCTGTTCCCAGCGCTGGACTTTATGATTCTCTTCGCATTTCGCCACCACCGTGATGATGAGCGGTGCGCGGAACGGCGCATTACGGGCTTTGTCGATAGCTTTGTCATCACTACCGGCAGCAATCGCCCCCTGTTCCAGTACGGCGCTGAAACGCTCGCGCCCTTCCCCTTCAATCACAAAAAAATGCCACGGTTGCAGGGACTGATGGTCCGGCGCACGCAGACCcgcacgc < 2:404470/300‑1 (MQ=255) gccgccAAGCTCCTTGGCACCTGCTGCCATTTGCATCGCCATGACCGCGCATCCTGCAGACATTTCCTTTTCCCAGCTCTGGACTTTATGATTCTCTTCGCATTTCGCCACCACCGTGATGATGAGCGGTGCGCGGAACGGCGCATTACGGGCTTTGTCGATAGCTTTGTCATCACTACCGGCAGCAATCGCCCCCTGTTCCAGTACGGCGCTGAAACGCTCGCGCCCTTCCCCTTCAATCACAAAAAAATGCCACGGTTGCATGGACTTATGGTCCGGCGCACGCATACCcgcacgc < 2:259534/298‑1 (MQ=255) || ATCCGGGTATGGTAACCCTCATTCCGTGAAGTGATAAGTGAGAGTGTCTGAATTCCTGCGCCTTTGCTCACAATCCAGACAGTTTCGCGACAATTATCAGAAATAAGTTACAAACGGC‑GTCGGGT‑CCGGGACGTTAATCGACG‑TAGATGC‑TTTCAGCTGCGGCGTACCGAGGTAGAGAAAACCGACAATTTTATCCTGCTCACGGCAACCGAATGCTTCACGCACTACCGGACTTTCAGTTAATGCGCCACTGCGCCAGATGCCGCCAAACCCCTGGGCAACTGCTGCCATTTGCATCGCCATGACCGCGCATCCGGCAGACATTTCCTGTTCCCAGCGCGGGACTTTATGATTCTCTTCGCATTTCGCCACCACCGTGATGATGAGCGGTGCGCGGAACGGCGCATTACGGGCTTTGTCGATAGCTTTGTCATCACTACCGGCAGCAATCGCCCCCTGTTCCAGTACGGCGCTGAAACGCTCGCGCCCTTCCCCTTCAATCACAAAAAAATGCCACGGTTGCATGGACTTATGGTCCGGCGCACGCATACCCGCACGC > NC_000913/1848029‑1848587 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |