| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,073,610 | G→A | N134N (AAC→AAT) | rutA ← | pyrimidine monooxygenase RutA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,073,610 | 0 | G | A | 98.5% | 207.9 / NA | 65 | N134N (AAC→AAT) | rutA | pyrimidine monooxygenase RutA |
| Reads supporting (aligned to +/- strand): ref base G (1/0); new base A (30/34); total (31/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.77e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CAGAAGTTGAAATCGGCATACCGGGCGGAGAACGCCATGCCAGCGTCGCTTTGCCCGGCGCAGATCACTTTCATGGGGACACTCGGTTGCGGACTCACGCGACAATCATTCATGGTGAAAAAATCGCCTTTAAAATCGCTTTTCCCCGTGCCCCACAGGTCGCGCAGCACCTGAACATATTCGGTGAGATAGTCGTAACGACGGGAGAAATAGTCATCGCCAGGCCAGATACCCATCTGCTCATACTCGGGCTTTTGCCAGCCAGTCACGAGGTTGACGCCAAAACGCCCGCCAGAGATGGAGTCGATGGTTGCGGCCATACGGGCGACGATTGCCGGAGGTAACGTTAAGGTGGCAGCAGTGGCGTAAATCTGAATGCGCGAGGTCACGGCCGCCAGCCCCGCCATCAAGGTGAACGACTCAAGGTTGTGATCCCAGAACTCAGTTTTGCCGCCAAAGCCACGCAGTTTGATCATCGACAGGGCGAAATCGAAATGGTAGTGCTCCGCTTTTTGCACAATGGCTTTATTCAGTTCAAAGGTCGGCATGTACTGCGGCGCGTGGGT > NC_000913/1073338‑1073903 | cagcaGTTGAAATCGGCATACCGGGCGGAGAACGCCATGCCAGCGTCGCTTTGCCCGGCGTAGATCACTTTCATGGGGACACTCGGTTGCGGACTCACGCGACAATCATTCATGGTGAAAAAATCGCCTTTAAAATCGCTTTTCCCCGTGCCCCACAGGTCGCGCAGCACCTGAACATATTCGGTGAGATAGTCGTAACGACGGGAGAAATAGTCATCGCCAGGCCAGATACCCATCTGCTCATACTCGGGCTTTTGCCAGCCAGTCACGAGATTGACGCCAAAACGCACGCAAGAGAt > 2:137910/5‑299 (MQ=255)cAGAAGTTGAAATCGGCATACCGGGCGGAGAACGCCATGCCAGCGTCGCTTTGCCCGGCGCAGATCACTTTCATGGGGACACTCGGTTGCGGACTCACGCGACAATCATTCATGGTGAAAAAATCGCCTTTAAAATCGCTTTTCCCCGTGCCCAACAGGTAGCGCAGCACCTGAAAATATTCGGTGAGATAGTCGTAACGACGGGAGAAATAGTCATCGCCAGGCCAGATACCCATCTGCTCCTACTCGGGCTTTTGCCAGCCAGTCACGAGGTTGACGCCAAAACGCCCGCCAGAGAt > 2:137573/1‑299 (MQ=255) agaattttaaaTCGGCATACCGGGCGGAGAACGCCATGCCAGCGTCGCTTTGCCCGGCGCAGATCACTTTCATGGGGACACTCGGTTGCGGACTCACGCGACAATCATTCATGGTGAAAAAATCGCCTTTAAAATCGCTTTTCCCCGTGCCCCACAGGTCGCGCAGCACCTGAACATATTCGGTTAGATAGTCGTAACGACGGGAGAAATAGTCATCGCCAGGCCAGATACCCATCTGCTCATACTCGGGCTTTTGCCAGCCAGTCACGAGATTGACGCCAAAACGCCCGCCATAGATg < 2:252179/291‑1 (MQ=255) aGTTGAAATCTGCATACCGGGCGGAGAACGCCATGCCAGCGTCGCTTTGCCCGGCGCAGATCACTTTCATGTGGACACTCGGTTGCGGACTCACGCGACAATCATTCATGTTGAAAAAATCGCCTTTAAAATCGCTTTTCCCCGTGCCCCACAGGTCGCGCAGCACCTGAACATATTCGGTTAGATAGTCGTAACGACGGGAGAAATAGTCATCGCCATGCCAGATACCCATCTGCTCATACTCGGGCTTTTGCCAGCCAGTCACGAGATTGACGCCAAAACGCCCGCCATAGATGGAGt < 2:173643/300‑1 (MQ=255) tCGGCATACCGGGCGGAGAACGCCATGCCAGCGTCGCTTTGCCCGGCGCAGATCACTTTCATGGGGACACTCGGTTGCGGACTCACGCGACAATCATTCATGGTGAAAAAATCGCCTTTAAAATCGCTTTTCCCCGTGCCCCACAGGTCGCGCAGCACCTGAACATATTCGGTGAGATAGTCGTAACGACGGGAGAAATAGTCATCGCCAGGCCAGATACCCATCTGCTCATACTCGGGCTTTTGCCAGCCAGTCACGAGATTGACGCCAAAACGCCCGCCAGAGATGGAGTCGATGGtt > 2:56831/1‑300 (MQ=255) aTACCGGGCGGAGAACGCCATGCCAGCGTCGCTTTGCCCGGCGCAGATCACTTTCATGTGGACACTCGGTTGCGGACTCACGCGACAATCATTCATGGTGAAAAAATCGCCTTTAAAATCGCTTTTCCCCGTGCCCCACAGGTCGCGCAGCACCTGAACATATTCGGTGAGATAGTCGTAACGACGGGAGAAATAGTCATCGCCAGGCCAGATACCCATCTGCTCATACTCGGGCTTTTGCCAGCCAGTCACGAGATTGACGCCAAAACGCCCGCCAGAGATGGAGTCGATGGTTGCGGc < 1:414011/300‑1 (MQ=255) aTACCGGGCGGAGAACGCCATGCCAGCGTCGCTTTGCCCGGCGCAGATCACTTTCATGGGGACACTCGGTTGCGGACTCACGCGACAATCATTCATGGTGAAAAAATCGCCTTTAAAATCGCTTTTCCCCGTGCCCCACAGGTCGCGCAGCACCTGAACATATTCGGTGAGATAGTCGTAACGACGGGAGAAATAGTCATCGCCAGGCCAGATACCCATCTGCTCATACTCGGGCTTTTGCCAGCCAGTCACGAGATTGACGCCAAAACGCCCGCCAGAGATGGAGTCGATGGTTGCGGc > 1:517078/1‑300 (MQ=255) gggCTGAGAACGCCATGCCAGCGTCGCTTTGCCCGGCGCAGATCACTTTCATGGGGACACTCGGTTGCGGACTCACGCGACAATCATTCATGGTGAAAAAATCGCCTTTAAAATCGCTTTTCCCCGTGCCCCACAGGTCGCGCAGCACCTGAACATATTCGGTTAGATAGTCGTAACGACGGGAGAAATAGTCATCGCCAGGCCAGATACCCATCTGCTCATACTCGGGCTTTTGCCAGCCAGTCACGAGATTGACGCCAAAACGCCCGCCAGAGATTGAGTCGATGGTTGCGGCCATa < 2:198761/299‑1 (MQ=255) gggCGGAGAACGCCATGCCAGCTTCGCTTTGCCCGGCGCAGATCACTTTCATGGGGACACTCGGTTGCGGACTCACGCGACAATCATTCATGGTGAAAAAATCGCCTTTAAAATCGCTTTTCCCCGTGCCCCACAGGTCGCGCAGCACCTGAACATATTCGTTGAGATAGTCGTAACGACGGTAGAAATAGTCATCGCCAGGCCAGATACCCATCTGCTCATACTCGGGCTTTTGCCAGCCAGTCACGAGATTGACGCCAAAACGCCCGCCAGAGATGGAGTCGATGGTTGCGGCCATAc < 2:16504/300‑1 (MQ=255) gggCGGAGAACGCCATGCCAGCGTCGCTTTGCCCGGCGCAGATCACTGTCATGGGGACACTCGGTTGCGGACTCACGCGACAATCATTCATGGTGAAAAAATCGCCTTTAAAATCGCTTTTCCCCGTGCCCCACAGGTCGCGCAGCACCTGAACATATTCGGTGAGATAGTCGTAACGACGGGAGAAATAGTCATCGCCAGGCCAGATACCCATCTGCTCATACTCGGGCTTTTGCCAGCCAGTCACGAGATTGACGCCAAAACGCCCGCCAGAGATGGAGTCGATGGTTGCGGCCATAc < 2:21015/300‑1 (MQ=255) cGCCATGCCAGCGTCGCTTTGCCCGGCGCAGATCACTTTCATGGGGACACTCGGTTGCGGACTCACGCGACAATCATTCATGGTGAAAAAATCGCCTTTAAAATCGCTTTTCCCCGTGCCCCACAGGTCGCGCAGCACCTGAACATATTCGGTGAGATAGTCGTAACGACGGGAGAAATAGTCATCGCCAGGCCAGATACCCATCTGCTCATACTCGGGCTTTTGCCAGCCAGTCACGAGATTGACGCCAAAACGCCCGCCAGAGATGGAGTCGATGGTTGCGGCCATACGGGCGACGAt > 1:165690/1‑300 (MQ=255) gCGTCGCTTTGCCCGGCGCAGATCACTTTCATGGGGACACTCGGTTGCGGACTCACGCGACAATCATTCATGGTGAAAAAATCGCCTTTAAAATCGCTTTTCCCCGTGCCCCACAGGTCGCGCAGCACCTGAACATATTCGGTGAGATAGTCGTAACGACGGGAGAAATAGTCATCGCCAGGCCAGATACCCATCTGCTCATACTCGGGCTTTTGCCAGCCNGTCACGAGATTGACGCCAAAACGCCCGCCAGAGATGGAGTCGATGGTTGCGGCCATACGGGCGACGATTGCCGGAGGt > 1:498189/1‑300 (MQ=255) gCGTCGCTTTGCCCGGCGCAGATCACTTTCATGGGGACACTCGGTTGCGGACTCACGCGACAATCATTCATGGTGAAAAAATCGCCTTTAAAATCGCTTTTCCCCGTGCCCCACAGGTCGCGCAGCACCTGAAAATATTCGGTGAGATAGTCGTAACGACGGGAGAAATAGTCATCGCCAGGCCAGATACCCATCTGCTCATACTCGGGCTTTTGCCAGCCAGTCACGAGATTGACGCCAAAACGCCCGCCAGAGATGGAGTCGATGGTTGCGGCCATACGGGCGACGATTGCCGGAGGt < 1:180844/300‑1 (MQ=255) gCTTTGCCCGGCGCAGATCACTTTCATGGGGACACTCGGTTGCGGACTCACGCGACAATCATTCATGGTGAAAAAATCGCCTTTAAAATCGCTTTTCCCCGTGCCCCACAGGTCGCGCAGCACCTGAACATATTCGGTGAGATAGTCGTAACGACGGGAGAAATAGTCATCGCCAGGCCAGATACCCATCTGCTCATACTCGTGCTTTTGCCAGCCAGTCACGAGATTGACGCCAAAACGCCCGCCAGAGATGGAGTCGATGGTTGCGGCCATACGTTCGACGATTGCCGGAGCTAACg < 2:434639/299‑1 (MQ=255) gCCCGGCGCAGATCACTTTCATGGGGACACTCGGTTGCGGACTCACGCGACAATCATTCATGGTGAAAAAATCGCCTTTAAAATCGCTTTTCCCCGTGCCCCCCAGGTCGCGCAGCACCTGAACATATTCGGTGAGATAGTCGTAACGAAGGGAGAAATAGTCATCGCCAGGCCAGATACCCATCTGCTCATACTCGGGCTTTTGCCAGCCAGTCACGAGATTGACGACAAAACGCCCGCCAGAGATGGAGTCGATGGTTGCGGCCATACGGGCGACGATTGCCGGAGGTAACGTTaa > 1:389423/1‑298 (MQ=255) gCCCGGCGCAGATCACTTTCATGGGGACACTCGGTTGCGGACTCACGCGACAATCATTCATGGTGAAAAAATCGCCTTTAAAATCGCTTTTCCCCGTGCCCCACAGGTCGCGCAGCACCTGAACATATTCGGTGAGATAGTCGTAACGACGGGAGAAATAGTCATCGCCAGGCCAGATACCCATCTGCTCATACTCGGGCTTTTGCCAGCCAGTCACGAGATTGACGCCAAAACGCCCGCCAGAGATGGAGTCGATGGTTGCGGCCATACGGGCGACGATTGCAGGAGGTAACGTTaa > 1:389431/1‑298 (MQ=255) gCCCGGCGCAGATCACTTTCATGGGGACACTCGGTTGCGGACTCACGCGACAATCATTCATGGTGAAAAAATCGCCTTTAAAATCGCTTTTCCCCGTGCCCCACAGGTCGCGCAGCACCTGAACATATTCGGTGAGATAGTCGTAACGAAGGGAGAAATAGTCATCGCCAGGCCAGATACCCATCTGCTCATACTCGGGCTTTTGCCAGCCAGTCACGAGATTGACGCCAAAACGCCCGCCAGAGATGGAGTCGATGGTTGCGGCCATACGGGCGACGATTGCCGGAAGTAACGTTa > 2:50587/1‑297 (MQ=255) ggctcAGATCACTTTCATTTGGACACTCGTTTGCGGACCCACGCGACAATCATTCATGGTGAAAAAATCGCCTTTAAAATCGCTTTTCCCCGTGCCCCACAGGTCGCGCAGCACCTGAACATATTCGGTTAGATAGTCGTAACGACGGGAGAAATAGTCATCGCCAGGCCAGATACCCATCTGCTCATACTCGGGCTTTTGCCAGCCAGTCACGAGATTGACGCCAAAACGCCCGCCAGAGATGGAGTCGATGGTTGCGGCCATACGGGCGACGATTGCCGGAGGTAACGTTAAGGt < 2:135978/293‑1 (MQ=255) gcgcAGATCACTTTCATGGGGACACTCGGTTGCGGACTCACGCGACAATCATTCATGGTGAAAAAATCGCCTTTAAAATCGCTTTTCCCCGTGCCCCACAGGTCGCGCAGCACCTGAACATATTCGGTGAGATAGTCGTAACGACGGGAGAAATAGTCATCGCCAGGCCAGATACCCATCTGCTCATACTCGGGCTTTTGCCAGCCAGTCACGAGATTGACGCCAAAACGCCCGCCAGAGATGGAGTCGATGGTTGCGGCCATACGGGCGACGATTGCCGGAGGTAACGTTAAGGt < 1:476272/296‑1 (MQ=255) gcgcAGATCACTTTCATGGGGACACTCGGTTGCGGACTCACGCGACAATCATTCATGGTGAAAAAATCGCCTTTAAAATCGCTTTTCCCCGTGCCCCACAGGTCGCGCAGCACCTGAACATATTCGGTGAGATAGTCGTAACGACGGGAGAAATAGTCATCGCCAGGCCAGATACCCATCTGCTCATACTCGGGCTTTTGCCAGCCAGTCACGAGATTGACGCCAAAACGCCCGCCAGAGATGGAGTCGATGGTTGCGGCCATACGGGCGACGATTGCCGGAGGTAACGTTAAGGTGgca > 1:273939/1‑300 (MQ=255) gATCACTTTCATTTGGACACTCGGTTGCGGACTCACGCGACAATCATTCATGGTGAAAAAATCGCCTTTAAAATCGCTTTTCCCCGTGCCCCACAGGTCGCGCAGCACCTGAACATAGTCGGTTAGATAGTCGTAACGACGGGAGAAATAGTCATCGCCAGGCCAGATACCCATCTGCTCAGACTCGGGCTTTTGCCAGCCAGTCACGAGATTGACGCCAAAACGCCCGCCAGAGATGGAGTCGATGGTTGCGGCCATACGGGCGACGATTGCCGGAGGTAACGTTAAGGTGGCAGCAGt < 1:557514/300‑1 (MQ=255) gATCACTTTCATGGGGNCACTCGGTTGCGGACTCACGCGACAATCATTCATGGTGAAAAAATCGCCTTTAAAATCGCTTTTCCCCGTGCCCCACAGGTCGCGCAGCACCTGAACATATTCGGTGAGATAGTCGTAACGACGGGAGAAATAGTCATCGCCAGGCCAGATACCCATCTGCTCATACTCGGGCTTTTGCCAGCCAGTCACGAGATTGACGCCAAGACGCCCGCCAGAGATGGAGTCGATGGTTGCGGCCATACGGGNGACGATTGCCGGAGGTAANGTTAAGGTGGCAGCAGt > 1:579967/1‑300 (MQ=255) gATCACTTTCATGGGGACACTCGGTTGCGGACTCACGCGACAATCATTCATGGTGAAAAAATCGCCTTTAAAATCGCTTTTCCCCGTGCCCCACAGGTCGCGCAGCACCTGAACATATTCGGTGAGATAGTCGTAACGACGGGAGAAATAGTCATCGCCAGGCCAGATACCCATCTGCTCATACTCGGGCTTTTGCCAGCCAGTCACGAGATTGACGCCAAAACGCCCGCCAGAGATGGAGTCGATGGTTGCGGCCATACGGGCGACGATTGCCGGAGGTAACGTTAAGGTGGCAGCAGt > 1:634324/1‑300 (MQ=255) gATCACTTTCATGGGGACACTCGGTTGCGGACTCACGCGACAATCATTCATGGTGAAAAAATCGCCTTTAAAATCGCTNTTCCCCGTGCCCCACAGGTCGCGCAGCACCTGAACATATTCGGTGAGATAGTCGTAACGACGGGAGAAATAGTCATCGCCAGGCCAGATACCCATCTGCTCATACTCGGGCTTTTGCCAGCCAGTCACGAGATTGACGCCAAAACGCCCGCCAGAGATGGAGTCGATGGTTGCGGCCATACGGGCGACGATTGCCGGAGGTAACGTTAAGGTGGCAGCAGt < 1:483480/300‑1 (MQ=255) aCTTTCATGGGGACACTCGGTTGCGGACTCACGCGACAATCATTCATGGTGAAAAAATCGCCTTTAAAATCGCTTTTCCCCGTGCCCCACAGGTCGCGCAGCACCTGAACATATTCGGTGAGATAGTCGTAACGACGGGAGAAATAGTCATCGCCAGGCCAGATACCCATCTGCTCATACTCGGGCTTTTGCCAGCCAGTCACGAGATTGACGCCAAAACGCCCGCCAGAGATGGAGTCGATGGTTGCGGCCATACGGGCGACGATTGCAGGAGGTAACGTTAAGGTGGCAGCAGTGGc > 2:655270/1‑299 (MQ=255) acTCGGTTGCGGACTCACGCGACAATCATTCATGGTGAAAAAATCGCCTTTAAAATCGCTTTTCCCCGTGCCCCACAGGTCGCGCAGCACCTGAACATATTCGGTGAGATAGTCGTAACGACGGGAGAAATAGTCATCGCCAGGCCAGATACCCATCTGCTCATACTCGGGCTTTTGCCAGCCAGTCACGAGATTGACGCCAAAACGCCCGCCAGAGATGGAGTCGATGGTTGCGGCCATACGGGCGACGATTGCCGGAGGTAACGTTAAGGTGGCAGCAGTGGCGTAAATCTGAATgc > 2:125203/1‑299 (MQ=255) acTCGATTGCGGACTCACGCGACAATCATTCATGGTGAAAAAATCGCCTTTAAAATCGCTTTTCCCCGTGCCCCACAGGTCGCGCAGCACCTGAACCTATTCGGTGAGATAGTCGTAACGACGGGGGCAATAGTCATCGCCAGGCCAGATACCCATCTGCTCATACTCGGGCTTTTGCCCGCCAGTCACGAGATTGACGCCAAAACGCCCGCCAGAGATGGAGTCGATGGTTGCGGCCATAAAGGCGACGATTGCCGGAGGTAACGTTAAGGTGGCAGTAGTGGCGTaaacccgaacgc > 2:125629/1‑290 (MQ=255) aCAATCATTCATGGTGAAAAAATCGCCTTTAAAATCGCTTTTCCCCGTGCCCCACAGGTCGCGCAGCACCTGAACATATTCGGTGAGATAGTCGTAACGACGGGAGAAATAGTCATCGCCAGGCCAGATACCCATCTGCTCATACTCGGGCTTTTGCCAGCCAGTCACGAGATTGACGCCAAAACGCCCGCCAGAGATGGAGTCGATGGTTGCGGCCATACGGGCGACGATTGCCGGAGGTAACGTTAAGGTGGCAGCAGTGGCGTAAATCTGAATGCGCGAGGTCACGGCCGCCAGccc < 1:547502/300‑1 (MQ=255) tGGTGAAAAAATCGCCTTTAAAATCACTTTTCCCCGTGCCCCACAGGTCGCGCAGCACCTGAACATATTCGGTGAGAGAGTCGTAACGACGGTAGAAATAGTCATCGCCAGGCCAGATACCCATCTGCTCATACTCGGGCTTTTGCCAGCCAGTCACGAGATTGACGCCAAAACGCCCGCCATAGATGGAGTCGATGGTTGCGGCCATACGGGCGACGATTGCCGGAGGTAACGTTAAGTTGGCAGCAGTGGCGTAAATCTGAATGCGCGAGGTCACGGCCGCCAGCCCCGCCATCAAgg < 2:122616/300‑1 (MQ=255) tttAAAATCGCTTTTCCCCGTGCCCCACAGGTCGCGCAGCACCTGAACATATTCGTTGAGATAGTCGTAACGACGGGAGAAATAGTCATCGCCAGGCCAGATACCAATCTGCTCATACTCGGGCTTTTGCCAGCCAGTCACGAGATTGACGCCAAAACGCCCGCCAGAGATGGAGTCGATGGTTGCGGCCATACGGGCGACGATTGCCGGAGGTAACGTTAAGGTGGCAGCAGTGGCGTAAATCTGAATGCGCGAGGTCACGGCCGCCAGCCCCGCCATCAAGGTGAACGACTCAAGGt < 1:197679/299‑1 (MQ=255) tttAAAATCGCTTTTCCCCGTGCCCCACAGGTCGCGCAGCACCTGAACATATTCGGTGAGATAGTCGTAACGACGGGAGAAATAGTCATCGCCAGGCCAGATACCCATCTGCTCATACTCGGGCTTTTGCCAGCCAGTCACGAGATTGACGCCAAAACGCCCGCCAGAGATGGAGTCGATGGTTGCGGCCATACGGGCGACGATTGCCGGAGGTAACGTTAAGGTGGCAGCAGTGGCGTAAATCTGAATGCGCGAGGTCACGGCCGCCAGCCCCGCCATCAAGGTGAACGACTCAAGGt < 1:435344/299‑1 (MQ=255) cccGTGCCCCACAGGTCGCGCAGCACCTGAACATATTCGGTGAGATAGTCGTAACGACGGGAGAAATAGTCATCGCCAGGCCAGATACCCATCTGCTCATACTCGGGCTTTTGCCAGCCAGTCACGAGATTGACGCCAAAACGCCCGCCAGAGATGGAGTCGATGGTTGCGGCCATACGGGCGACGATTGCCGGAGGTAACGTTAAGGTGGCAGCAGTGGCGTAAATCTGAATGCGCGAGGTCACGGCCGCCAGCCCCGCCATCAAGGTGAACGACTCAAGGTTGTGATCCCAGAACTCa > 1:543947/1‑300 (MQ=255) gTGCCCCACAGGTCGCGCAGCACCTGAACGTATTCGGTGAGATAGTCGTAACGACGGGAGAAATAGTCATCGCCAGGCCAGATACCCATCTGCTCATACTCGGGCTTTTGCCAGCCAGTCACGAGATTGACGCCAAAACGCCCGCCAGAGATGGAGTCGATGGTTGCGGCCATACGGGCGACGATTGCAGGAGGTAACGTTAAGGTGGCAGCAGTGGCGTAAATCTGAATGCGCGAGGTCACGGCCGCCAGCCCCGCCATCAAGGTGAACGACTAAAGGTTGTGATCCCAGAACTCAGtt > 1:632605/1‑300 (MQ=255) gTGCCCCACAGGTCGCGCAGCACCTGAACATATTCGGTGAGATAGTCGTAACGACGGGAGAAATAGTCATCGCCAGGCCAGATACCCATCTGCTCATACTCGGGCTTTTGCCAGCCAGTCACGAGATTGACGCCAAAACGCCCGCCAGAGATGGAGTCGATGGTTGCGGCCATACGGGCGACGATTGCCGGAGGTAACGTTAAGGTGGCAGCAGTGGCGTAAATCTGAATGCGCGAGGTCACGGCCGCCAGCCCCGCCATCAAGGTGAACGACTCAAGGTTGTGATCCCAGAACTCAGtt > 2:572703/1‑300 (MQ=255) gTGCCCCACAGGTCGCGCAGCACCTGAACATATTCGGTGAGATAGTCGTAACGACGGGAGAAATAGTCATCGCCAGGCCAGATACCCATCTGCTCATACTCGGGCTTTTGCCAGCCAGTCACGAGATTGACGCCAAAACGCCCGCCAGAGATGGAGTCGATGGTTGCGGCCATACGGGCGACGATTGCCGGAGGTAACGTTAAGGTGGCAGCAGTGGCGTAAATCTGAATGCGCGAGGTCACGGCCGCCAGCCCAGCCATCAAGGTGAACGACTCAAGGTTGTGATCCCAGAACTCAGtt > 2:331264/1‑300 (MQ=255) ccccACAGGTCGCGCAGCACCTGAACATATTCGGTGAGATAGTCGTAACGACGGGAGAAATAGTCATCGCCAGGCCAGATACCCATCTGCTCATACTCGGGCTTTTGCCAGCCAGTCACGAGATTGACGCCAAAACGCCCGCCAGAGATGGAGTCGATGGTTGCGGCCATACGGGCGACGATTGCCGGAGGTAACGTTAAGGTGGCAGCAGTGGCGTAAATCTGAATGCGCGAGGTCACGGCCGCCAGCCCCGCCATCAAGGTGAACGACTCAAGGTTGTGATCCCAGAACTCAGtttt > 1:385385/1‑299 (MQ=255) ccACAGGTCGCGCAGCACCTGAACATATTCGGTGAGATAGTCGTAACGACGGGAGAAATAGTCATCGCCAGGCCAGATACCCATCTGCTCATACTCGGGCTTTTGCCAGCCAGTCACGAGATTGACGCCAAAACGCCCGCCAGAGATGGAGTCGATGGTTGCGGCCATACGGGCGACGATTGCCGGAGGTAACGTTAAGGTGGCAGCAGTGGCGTAAATCTGAATGCGCGAGGTCACGGCCGCCAGCCCCGCCATCAAGGTGAACGACTCAAGGTTGTGATCCCAGAACTCAGTTTTgcc > 1:676122/1‑300 (MQ=255) ctgcgagatgtgtataagagacagagaTAGTCGTAACGACGGGAGAAATAGTCATCGCCAGGCCAGATACCCATCTGCTCATACTCGGGCTTTTGCCAGCCAGTCACGAGATTGACGCCAAAACGCCCGCCAGAGATGGAGTCGATGGTTGCGGCCATACGGGCGACGATTGCCGGAGGTAACGTTAAGGTGGCAGCAGTGGCGTAAATCTGAATGCGCGAGGTCACGGCCGCCAGCCCCGCCATCAAGGTGAACGACTCAAGGTTGTGATCCCAGAACTCAGTTTTGCCGCCAAAGCCa > 1:95479/24‑300 (MQ=255) ccTGAACATATTCGGTGAGATAGTCGTAACGACGGGAGAAATAGTCATCGCCAGGCCAGATACCCATCTGCTCATACTCGGGCTTTTGCCAGCCAGTCACGAGATTGACGCCAAAACGCCCGCCAGAGATGGAGTCGATGGTTGCGGCCATACGGGCGACGATTGCCGGAGGTAACGTTAAGGTGGCAGCAGTGGCGTAAATCTGAATGCGCGAGGTCACGGCCGCCAGCCCCGCCATCAAGGTGAACGACTCAAGGTTGTGATCCCAGAACTCAGTTTTGCCGCCAAAGCCACGCAGtt > 2:383324/1‑300 (MQ=255) tcgtttagaTAGTCGTAACGACGGGAGAAATAGTCATCGCCAGGCCAGATACCCATCTGCTCATACTCGGGCTTTTGCCAGCCAGTCACGAGATTGACGCCAAAACGCCCGCCATAGATGGAGTCGATGGTTGCTGCCATACGTGCGACGATTGCCGGAGGTAACGTTAAGGTGGCAGCAGTGGCGTAAATCTGAATGCGCGAGGTCACGGCCGCCAGCCCCGCCATCAAGGTGAACGACTCAAGGTTGTGATCCCAGAACTCAGTTTTGCCGCCAAAGCCACGCAGTTTGATCATCGAc < 2:103970/294‑1 (MQ=255) tCGGTGGGATAGTCGTAGCGATGGGAGAAATATTCATCGCCATGCCAGATACCCATCTGCTCATACTCGGGCTTTTGCCAGCCAGTCACGAGATTGACGCCAAAACGCCCGCCAGAGATGGAGTCGATGGTTGCGGCCATACGGGCGACGATTGCCGTAGGTAACGTTAAGGTGGCAGCAGTGGCGTAAATCTGAATGCGCGAGGTCACGGCCGCCAGCCCCGCCATCAAGGTGAACGACTCAAGGTTGTGATCCCAGAACTTAGTTTTGCCGCCAAAGCCACGCAGTTTGATCATCGat < 2:273939/300‑2 (MQ=255) tCGGTGAGATAGTCGTAACGACGGGAGAAATAGTCATCGCCAGGCCAGATACCCATCTGCTCATACTCGGGCTTTTGCCAGCCAGTCACGAGATTGACGCCAAAACGCCCGCCAGAGATGGAGTCGATGGTTGCGGCCATACGGGCGACGATTGCCGGAGGTAACGTTAAGGTGGCAGCAGTGGCGTAAATCTGAATGCGCGAGGTCACGGCCGCCAGCCCCGCCATCAAGGTGAACGACTCAAGGTTGTGATCCCAGAACTCAGTTTTGCCGCCAAAGCCACGCAGTTTGATCATCGAc < 1:56831/300‑1 (MQ=255) gaTAGTCGTAACGACGGGAGAAATAGTCATCGCCAGGCCAGATACCCATCTGCTCATACTCGGGCTTTTGCCAGCCAGTCACGAGATTGACGCCAAAACGCCCGCCAGAGATGGAGTCGATGGTTGCGGCCATACGGGCGACGATTGCCGGAGGTAACGTTAAGGTGGCAGCAGTGGCGTAAATCTGAATGCGCGAGGTCACGGCCGCCAGCCCCGCCATCAAGGTGAACGACTCAAGGTTGTGATCCCAGAACTCAGTTTTGCCGCCAAAGCCACGCAGTTTGATCATCGACAGGGcga > 1:162382/1‑300 (MQ=255) acgacgGGATAAATAGTCATCGCCAGGCCAGATACCCATCTGCTCATACTCGGGCTTTTGCCAGCCAGTCACGAGATTGACGCCAAAACGCCCGCCAGAGATGGAGTCGATGGTTGCGGCCATACGGGCGACGATTGCCGGAGGTAACGTTAAGGTGGCAGCAGTGGCGTAAATCTGAATGCGCGAGGTCACGGCCGCCAGCCCCGCCATCAAGGTGAACGACTCAAGGTTGTGATCCCAGAACTCAGTTTTGCCGCCAAAGCCACGCAGTTTGATCATCGACAGGGCGAAATCGAAATg < 2:444288/300‑1 (MQ=255) gagaAATAGTCATCGCCAGGCCAGATACCCATCTGCTCATACTCGGGCTTTTGCCAGCCAGTCACGAGATTGACGCCANAACGCCCGCCATAGATGGAGTCGATGGTTGCGGCCATACGGGCGACGATTGCCGGAGGTAACGTTAAGGTGGCAGCAGTGGCGTAAATCTGAATGCGCGAGGTCACGGCCGCCAGCCCCGCCATCAAGGTGAACGACTCAAGGTTGTGATCCCAGAACTCAGTTTTGCCGCCAAAGCCACGCAGTTTGATCATCGACAGGGCGAAATCGAAATGGTAGTGc < 1:492154/300‑1 (MQ=255) gaAATAGTCATCGCCAGGCCAGATACCCATCTGCTCATACTCGGGCTTTTGCCAGCCAGTCACGAGATTGACGCCAAAACGCCCGCCAGAGATGGAGTCGATGGTTGCGGCCATACGGGCGACGATTGCCGGAGGTAACGTTAAGGTGGCAGCAGTGGCGTAAATCTGAATGCGCGAGGTCACGGCCGCCAGCCCCGCCATCAAGGCGAACGACTCAAGGTTGTGATCCCAGAACTCAGTTTTGCCGCCAAAGCCACGCAGTTTGATCATCGACAGGGCGAAATCGAAATGGTAGTGCTc < 1:397459/300‑1 (MQ=255) tCGCCAGGCCAGATACCCATCTGCTCATACTCGGGCTTTTGCCAGCCAGTCACGAGATTGACGCCAAAACGCCCGCCAGAGATGGAGTCGATGGTTGCGGCCATACGGGCGACGATTGCCGGAGGTAACGTTAAGGTGGCAGCAGTGGCGTAAATCTGAATGCGCGAGGTCACGGCCGCCAGCCCCGCCATCAAGGTGAACGACTCAAGGTTGTGATCCCAGAACTCAGTTTTGCCGCCAAAGCCACGCAGTTTGATCATCGACAGGGCGAAATCGAAATGGTAGTGCTCCGCTTTTTGc > 1:375245/1‑300 (MQ=255) gccagATACCCATCTGCTCATACTCGGGCTTTTGCCAGCCAGTCACGAGATTGACGCCAAAACGCCCGCCAGAGATGGAGTCGATGGTTGCGGCCATACGGGCGACGATTGCCGGGGGTAACGTTAAGGTGGCAGCAGTGGCGTAAATCTGAATGCGCGAGGTCACGGCCGCCAGCCCCGCCATCAAGGTGAACGACTCAAGGTTGTGATCACAGAACTCAGTTTTGCCGCCAAAGCCACACAGTTTGa > 2:231410/1‑249 (MQ=255) gccagATACCCATCTGCTCATACTCGGGCTTTTGCCAGCCAGTCACGAGATTGACGCCAAAACGCCCGCCAGAGATGGAGTCGATGGTTGCGGCCATACGGGCGACGATTGCCGGAGGTAACGTTAAGGTGGCAGCAGTGGCGTAAATCTGAATGCGCGAGGTCACGGCCGCCAGCCCCGCCATCAAGGTGAACGACTCAAGGTTGTGATCCCAGAACTCAGTTTTGCCGCCAAAGCCACGCAGTTTGATCATCGACAGGGCGAAATCGCAATGGTAGTGCTCCGCTTTTTGCACAAt > 2:231499/1‑298 (MQ=255) gccagATACCCATCTGCTCATACTCGGGCTTTTGCCAGCCAGTCACGAGATTGACGCCAAAACGCCCGCCAGAGATGGAGTCGATGGTTGCGGCCATACGGGCGACGATTGCCGGAGGTAAAGTTAAGGTGGCAGCAGTGGCGTAAATCTGAATGCGCGAGGTCACGGCCGCCAGCCCCGCCATCAAGGTGAACGACTCAAGGTTGTGATCCCAGAACTCAGTTTTGCCGCCAAAGCCACGCAGTTTGATCATCGACAGGGCGAAATCGACATGGTAGTGTTCCGCTTTTTGCACAAt > 2:231394/1‑298 (MQ=255) aTCTGCTCATACTCGGGCTTTTGCCAGCCAGTCACGAGATTGACGCCAAAACGCCCGCCAGAGATGGAGTCGATGGTTGCGGCCATACGGGCGACGATTGCCGGAGGTAACGTTAAGGTGGCAGCAGTGGCGTAAATCTGAATGCGCGAGGTCACGGCCGCCAGCCCCGCCATCAAGGTGAACGACTCAAGGTTGTGATCCCAGAACTCAGTTTTGCCGCCAAAGCCACGCAGTTTGATCATCGACAGGGCGAAATCGAAATGGTAGTGCTCCGCTTTTTGCACAATGGCTTTAtgc < 1:278008/297‑3 (MQ=255) aTCTGCTCATACTCGGGCTTTTGCCAGCCAGTCACGAGATTGACGCCAAAACGCCCGCCAGAGATGGAGTCGATGGTTGCGGCCATACGGGCGACGATTGCCGGAGGTAACGTTAAGGTGGCAGCAGTGGCGTAAATCTGAATGCGCGAGGTCACGGCCGCCAGCCCCGCCATCAAGGTGAACGACTCAAGGTTGTGATCCCAGAACTCAGTTTTGCCGCCAAAGCCACGCAGTTTGATCATCGACAGGGCGAAATCGAAATGGTAGTGCTCCGCTTTTTGCACAATGGCTTTATTc < 1:74632/297‑1 (MQ=255) tGCTCATACTCGGGCTTTTGCCAGCCAGTCACGAGATTGACGCCAAAACGCCCGCCAGAGATGGAGTCGATGGTTGCGGCCATACGGGCGACGATTGCCGTAGGTAACGTTAAGGTGGCAGCAGTGGCGTAAATCTGAATGCGCGAGGTCACGGCCGCCAGCCCCGCCATCAAGGTGAACGACTCAAGGTTGTGATCCCAGAACTCAGTTTTGCCGCCAAAGCCACGCAGTTTGATCATCGACAGGGCGAAATCGAAATGGTAGTGCTCCGCTTTTTGCACAATGGCTTTATTCAGTTc < 2:591125/299‑1 (MQ=255) gCTCATACTCGGGCTTTTGCCAGCCAGTCACGAGATTGACGCCAAAACGCCCGCCAGAGATGGAGTCGATGGTTGCGGCCATACGGGCGACGATTGCCGGAGGTAACGTTAAGGTGGCAGCAGTGGCGTAAATCTGAATGCGCGAGGTCACGGCCGCCAGCCCCGCCATCAAGGTGAACGACTCAAGGTTGTGATCCCAGAACTCAGTTTTGCCGCCAAAGCCACGCAGTTTGATCATCGACAGGGCGAAATCGAAATGGTAGTGCTCCGCTTTTTGCACAATGGCTTTATTCAGTTCaa > 2:629418/1‑300 (MQ=255) gCTCATACTCGGGCTTTTGCCAGCCAGTCACGAGATTGACGCCAAAACGCCCGCCAGAGATGGAGTCGATGGTTGCGGCCATACGGGCGACGATTGCCGGAGGTAACGTTAAGGTGGCAGCAGTGGCGTAAATCTGAATGCGCGAGGTCACGGCCGCCAGCCCCGCCATCAAGGTGAACGACTCAAGGTTGTGATCCCAGAACTCAGTTTTGCCGCCAAAGCCACGCAGTTTGATCATCGACAGGGCGAAATCGAAATGGTAGTGCTCCGCTTTTTGCACAATGGCTTTATTCAGTTCaa > 1:122876/1‑300 (MQ=255) aTACTCGGGCTTTTGCCAGCCAGTCACGAGATTGACGCCAAAACGCCCGCCAGAGATGGAGTCGATGGTTGCGGCCATACGGGCGACGATTGCCGGAGGTAACGTTAAGGTGGCAGCAGTGGCGTAAATCTGAATGCGCGAGGTCACGGCCGCCAGCCCCGCCATCAAGGTGAACGACTCAAGGTTGTGATCCCAGAACTCAGTTTTGCCGCCAAAGCCACGCAGTTTGATCATCGACAGGGCGAAATCGAAATGGTAGTGCTCCGCTTTTTGCACAATGGCTTTATTCAGTTCAAAgg < 1:16795/299‑1 (MQ=255) ttttGCCAGCCATTCACGAGATTGACGCCAAAACGCCCGCCAGAGATGGAGTCGATGGTTGCGGCCATACGGGCGACGATTGCCGGAGGTAACGTTAAGGTGGCAGCAGTGGCGTAAATCTGAATGCGCGAGGTCACGGCCGCCAGCCCCGCCATCAAGGTGAACGACTCAAGGTTGTGATCCCAGAACTCAGTTTTGCCGCCAAAGCCACGCAGTTTGATCATCGACAGGGCGAAATCGAAATGGTAGTGCTCCGCTTTTTGCACAATGGCTTTATTCAGTTCAAAGGTCGGCATGTAc < 2:77523/300‑1 (MQ=255) ttttGCCAGCCAGTCACGAGATTGACGCCAAAACGCCCGCCAGAGATGGAGTCGATGGTTGCGGCCATACGGGCGACGATTGCCGGAGGTAACGTTAAGGTGGCAGCAGTGGCGTAAATCTGAATGCGCGAGGTCACGGCCGCCAGCCCCGCCATCAAGGTGAACGACTCAAGGTTGTGATCCCAGAACTCAGTTTTGCCGCCAAAGCCACGCAGTTTGATCATCGACAGGGCGAAATCGAAATGGTAGTGCTCCGCTTTTTGCACAATGGCTTTATTCAGTTCAAAGGTCGGCATGTAc < 2:644827/300‑1 (MQ=255) tGCCAGCCAGTCACGAGATTGACGCCAAAACGCCCGCCAGAGATGGAGTCGATGGTTGCGGCCATACGGGCGACGATGGCCGGAGGTAACGTTAAGGTGGCAGCAGTGGCGTAAATCTGAATGCGCGAGGTCACGGCCGCCAGCCCCGCCATCAAGGTGAACGANTCAAGGTTGTGATCCCAGAACTCAGTTTTGCCNCCAAAGCCACGCAGTTTGATCATCGACAGGGCGAAATCGAAATGGTAGTGCTCCGCTTTTTGCACAATGGCTTTATTCAGTTCAAAGGTCGGCATGTACTgc < 2:517078/300‑1 (MQ=255) agccagTCACTAGATTGACGCCAAAACGGCCGCCAGAGATGGAGTCGATGGTTGCGGCCATACGGGCGACGATTGCCGTAGGTAACTTTAAGGTGGCAGCATTGGCGTAAATCTGAATGCGCGAGGTCACGGCCGCCAGCCCCGCCATCAAGGTGAACGACTCAAGGTTGTGATCCCAGAACTCAGTTTTGCCGCCAAAGCCACGCAGTTTGATCATCGACAGGGCGAAATCGAAATGGTAGTGCTCCGCTTTTTGCACAATGGCTTTATTCAGTTCAAAGGTCGGCATGTACTgcgg < 2:243116/298‑1 (MQ=255) agccagTCACGAGATTGACGCCAAAACGCCCGCCAGAGATGGAGTCGATGGTTGCGGCCATACGGGCGACGATTGCCGGAGGTAACGTTAAGGTGGCAGCAGTGGCGTAAATCTGAATGCGCGAGGTCACGGCCGCCAGCCCCGCCATCAAGGTGAACGACTCAAGGTTGTGATCCCAGAACTCAGTTTTGCCGCCAAAGCCACGCAGTTTGATCATCGACAGGGCGAAATCGAAATGGTAGTGCTCCGCTTTTTGCACAATGGCTTTATTCAGTTCAAAGGTCGGCATGTACTgcgg < 2:403743/298‑1 (MQ=255) agccagTCACGAGATTGACGCCAAAACGCCCGCCAGAGATGGAGTCGATGGTTGCGGCCATACGGGCGACGATTGCCGGAGGTAACGTTAAGGTGGCAGCAGTGGCGTAAATCTGAATGCGCGAGGTCACGGCCGCCAGCCCCGCCATCAAGGTGAACGACTCAAGGTTGTGATCCCAGAACTCAGTTTTGCCGCCAAAGCCACGCAGTTTGATCATCGACAGGGCGAAATCGAAATGGTAGTGCTCCGCTTTTTGCACAATGGCTTTATTCAGTTCAAAGGTCGGCATGTACTgcgg < 1:654516/298‑1 (MQ=255) gccagTCACGAGATTGACGCCAAAACGCCCGCCAGAGATGGAGTCGATGGTTGCGGCCATACGGGCGACGATTGCCGGAGGTAACGTTAAGGTGGCAGCAGTGGCGTAAATCTGAATGCGCGAGGTCACGGCCGCCAGCCCCGCCATCAAGGTGAACGACTCAAGGTTGTGATCCCAGAACTCAGTTTTGCCGCCAAAGCCACGCAGTTTGATCATCGACAGGGCGAAATCGAAATGGTAGTGCTCCGCTTTTTGCACAATGGCTTTATTCAGTTCAAAGGTCGGCATGTACTGCGgcgc < 1:409086/300‑1 (MQ=255) agTCACGAGATTGACGCCAAAACGCCCGCCATAGAGGGAGTCGATGGTTGCGGCCATACGGGCGACGATTGCCGGAGGTAACGTTAAGGTGGCAGCATTGGCGTAAATCTGAATGCGCGAGGTCACGGCCGCCAGCCCCGCCATCAAGGTGAACGACTCAAGGTTGTGATCCCAGAACTCAGTTTTGCCGCCAAAGCCACGCAGTTTGATCATCGACAGGGCGAAATCGAAATGTTAGTGCTCCGCTTTTTGCACAATGGCTTTATTCAGTTCAAAGGTCGGCATGTACTGCGGCGCGt < 2:275746/299‑1 (MQ=255) cACGAGATTGACGCCAAAACGCCCGCCAGAGATGGAGTCGATGGTTGCGGCCATACGGGCGACGATTGCCGGAGGTAACGTTAAGGTGGCAGCAGTGGCGTAAATCTGAATGCGCGAGGTCACGGCCGCCAGCCCCGCCATCAAGGTGAACGACTCAAGGTTGTGATCCCAGAACTCAGTTTTGCCGCCAAAGCCACGCAGTTTGATCATCGACAGGGCGAAATCGAAATGGTAGTGCTCCGCTTTTTGCACAATGGCTTTATTCAGTTCAAAGGTCGGCATGTACTGCGGCGCGTGGGt > 1:557510/1‑300 (MQ=255) | CAGAAGTTGAAATCGGCATACCGGGCGGAGAACGCCATGCCAGCGTCGCTTTGCCCGGCGCAGATCACTTTCATGGGGACACTCGGTTGCGGACTCACGCGACAATCATTCATGGTGAAAAAATCGCCTTTAAAATCGCTTTTCCCCGTGCCCCACAGGTCGCGCAGCACCTGAACATATTCGGTGAGATAGTCGTAACGACGGGAGAAATAGTCATCGCCAGGCCAGATACCCATCTGCTCATACTCGGGCTTTTGCCAGCCAGTCACGAGGTTGACGCCAAAACGCCCGCCAGAGATGGAGTCGATGGTTGCGGCCATACGGGCGACGATTGCCGGAGGTAACGTTAAGGTGGCAGCAGTGGCGTAAATCTGAATGCGCGAGGTCACGGCCGCCAGCCCCGCCATCAAGGTGAACGACTCAAGGTTGTGATCCCAGAACTCAGTTTTGCCGCCAAAGCCACGCAGTTTGATCATCGACAGGGCGAAATCGAAATGGTAGTGCTCCGCTTTTTGCACAATGGCTTTATTCAGTTCAAAGGTCGGCATGTACTGCGGCGCGTGGGT > NC_000913/1073338‑1073903 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |