| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,466,438 | 0 | T | G | 28.9% | 54.7 / 22.7 | 47 | pseudogene (1047/2518 nt) | ydbA | putative outer membrane protein, N‑terminal fragment |
| Reads supporting (aligned to +/- strand): ref base T (14/18); new base G (4/9); total (19/28) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.14e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
ATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCAC‑CGTTGACGGCAAGGATTCCACCGGT‑ACGGAAATCAACGGT‑AATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTAC > NC_000913/1466145‑1466704 | aTTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCAC‑CGTTGACGGCAAGGATTCCACCGGT‑ACGGAAATCAACGGT‑AATAACGGAAAAGTTATTCAg < 1:566445/300‑1 (MQ=255)aTTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGTGACAGCACGCCGGTGGATAACAAGGGCACCACGACCGTCACCGCTCCGGAGTCCATGGGTATCCAGATCGAAGGTGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCAACAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAAACAC‑CGTTGAAGGCAAGGATTCAAACGGT‑AAGGAAATCAAAGGT‑AATAAAGGAGAAGTTATTcc > 2:700842/1‑298 (MQ=17) cGGTATTGATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCAACAACGGTGGCACCGGCACTCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCAC‑CGTTGACGGCAAGGATTCAAACGGT‑ACGGAAATTGCTGGT‑AATAACGGAAAGGTTGTTCAGGACGGCGATCTGGATGTCAgc > 1:227798/1‑283 (MQ=17) aTTGATATCACCGGTGACAGCGCGACGGTGGATAACAGGGACACCACGACCGTCACTGATCCGGAGGCTGTGGGTATTCAGATCGATGGTGGCAAGGCCATCGTCAATAATGAAGGCGAGAGTATCATCACCAACGGTGGCACCGGCACCTAGATTAATGGTGANGACGCCACGGCAAACAACAACGGCAAAACCAC‑CGTTGACGGCAAGGATTCCACCGGT‑ACGGAAATCAGCGGT‑AATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGat < 2:521066/300‑1 (MQ=18) ttGATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGTTGATGACGCCACGGCAAACAACAACGGCAAAACCAC‑CGTTGACGGCAAGGATTCCACCGGT‑ACGGAAATCAACGGT‑AATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGata < 1:700842/300‑1 (MQ=255) gATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATGGGTATCCCGATCGACGGTGACAAGGCCATCGTAAACAACGAAGGCGAGAGCACCATCACCAACAGTGGCACCGGCACCCCGATTAATGGTGATGACGCCACGGCCAACAACAACGACAAAACAAC‑CGTTGACGGCAAGGATTCCACCGGT‑ACGGAAATCACCGAC‑ACTAACGGAAAACTGATTCAAGACGGCGACCTTGATGTCAACGGCGGCGGTAACGGTATTGatat > 2:100660/1‑299 (MQ=17) gATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCNATAACGAAGGCGAGAGCACCATCACCAACGGTNGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCAC‑CGTTGACGGCAAGGATTCCACCGGT‑ACGGAAATTGCTGGT‑AATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGat > 2:532395/1‑297 (MQ=14) gATATCACCGGTGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAAATCTACAGTTACAAGACCACCGTAAACAACAAAGGCGAGAGCACCATCAACAACGGTGGCACCGGCAAAAAGAGTGAGGGTGGTGAAGACACGGCAAACAACAACGGCAAAACCAC‑CGTTGACGGCAAGGATTACACCGGT‑ACGGAAATTAATGGT‑AATGACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATc > 1:694876/1‑300 (MQ=17) aCCGGTGACAGCGCGACGGTGGATAACAAGGGCACCATGACCGTCACCGATCAGGAGTCCATGGGTATCCAGATCGAAGGTGACAAGGCCATCGTCAATAACGAAGGCAAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCAC‑CGTTGACGGAAAGGATTCCACCGGT‑ACGGAAATCACCGGC‑AATAAAGGAAAAGGTATTCAGAACGGAGATCTGGACGTCAGCGGCGGCGGTCACGGTATTGATATCAACGGc > 2:392909/1‑300 (MQ=18) gATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCAC‑CGTTGACGGCAAGGATTCCACCGGT‑ACGGAAATCAACGGT‑AATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAAc < 1:368271/300‑1 (MQ=255) gTCACCGGTCCGGGGTCCGTGGTTATCCAGATCGACGTTTACGAGGCTATCGTCAATAACGAAGGAGAGAGCGCCATCACCAATTGTGGCATCGGCATCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCAC‑CGTTGACGGCAAGGATTCCACCGGT‑ACGGAAATCAACGGT‑AATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCAc < 1:708549/299‑1 (MQ=17) gTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGTCTACAAGGCCATCGTCAATAACGAAGGCAAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCAC‑CGTTGACGGCAAGGATTCCACCGGT‑ACGGAAATCAACGGT‑AATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCAc < 1:708293/299‑1 (MQ=255) aTCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCAACAATGGTGGCACCGGCACTCAGATTAACGGTGATAGCGCAGAGGCACACAACAACGG‑ACAACCAAATGCCGCCGGCAAGGATCCCAC‑GGTCACGGAGATCCA‑GGTGACCGACGTAAAAGTAATTCAGGAGGGAGATCTGGATGTCAGAGGCGGCGGTAAAGGTATTGATATCAACGGCGACGGCGCAAAGGTGGATAAAAAGGGAAACATGACCGTCaaagatcc > 2:344850/1‑291 (MQ=255) gTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCAACAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCAC‑CGTTGACGGCAAGGATTCCACCGGT‑ACGGAAATCAACGGT‑AATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCAATCCGGAGTCCAt > 2:156487/1‑300 (MQ=255) gTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCATATTAATGGTGATGACGCCACGGCAAACAACAACTGCAAAACCAC‑CGTTGACGGCAAGGATTCCACCGGT‑ACGGAAGTCAACGGT‑AATAACGGAAGAGTCATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGTTCACGTTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATcc < 2:309699/300‑1 (MQ=255) gTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGTTGATGACGCCACGGCAAACAACAACGGCAAAACCAC‑CGTTGACGGCAAGGATTCCACCGGT‑ACGGAAATCAACGGT‑AATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATcc < 2:309708/300‑1 (MQ=255) gACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCAC‑CGTTGACGGCAAGGATTCCACCGGT‑ACGGAAATCAACGGT‑AATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAg < 1:505784/270‑1 (MQ=255) gACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCAC‑CGTTGACGGCAAGGATTCCACCGGT‑ACGGAAATCAACGGT‑AATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAg > 2:505784/1‑270 (MQ=255) aGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCAC‑CGTTGACGGCAAGGATTCCACCGGT‑ACGGAAATCAACGGT‑AATAACGGAAAAGTTAGTCAGGACGGTGATCTGGATGTTAGCGGCGGCGGTCACGGTATTGATATCACAGGTGACAGCGCAAAGGTGGATAAAAAGGGCACCATGAACGTCAACGATCCGGAGTCCATCGGTATCCAGGTTGACAGCGACCAgggca > 2:580961/1‑297 (MQ=17) aTCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCNAACAACAACGGCAAAACCAC‑CGTTGACGGCAAGGATTCCACCGGT‑ACGGAAATCAACGGT‑AATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGccatcgt < 1:156487/299‑7 (MQ=255) aTCGTCAATAACGAAGGCGAGAACACCAGCACCAACGGTGGCACCGGCATCCAGATTAATGTTGATGACGCCACGGCAAACAACAACGGCAAAACCAC‑CGTTGACGGCAAGGATTCCACCGGG‑ACGGAAATCAACGGT‑AATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGgttg < 2:253914/298‑1 (MQ=255) tCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCAC‑CGTTGACGGCAAGGATTCCACCGGT‑ACGGAAATCAACGGT‑AATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCa < 1:717209/300‑1 (MQ=11) gcgataatggtggcagtggtatctggATTAATGGTGATGATGCCACGGTAAACAACAACGGCAAAACCAC‑CGTTGACGGTAAGGATTCCACCGGT‑ACGGAAATCAACGGT‑AATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACNGTATTGATATCACCGGCGACAGCGCAACGGTGNATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCa < 2:536023/275‑1 (MQ=17) taatcgtgacgttgatcttctgATTAGTGTTGATAACGCCACGACAAACAACAACGGCAAAACCAC‑CGTTGACGGTAAGGATTCCACCGGT‑ACGGAAATCAACGGT‑AATAACGGAAAAGTGATTCAGGACGGCGATCTGGAGGTCAGCGGCGGCGGGCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATTGGTATCCAGATTGACGGCGACCAGGCGGTTGTTAATAACGAAGGCGAGAGCGCCATCACCAACgg < 2:63558/279‑1 (MQ=14) aaCGGTGGCGTCGGCATCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCAC‑CGTTGACGGCAAGGATTCCACCGGT‑ACGGAAATCAACGGT‑AATAACGGAAAAGCTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCAc < 1:375853/218‑1 (MQ=255) aGATTAATGGTGATGACGCCACGGTAAACAACAACGGCAAAACCAC‑CGTTGACGGCAAGGATTCCACCGGT‑ACGGAAATCAACGGT‑AATAACGGGAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCAcc < 2:53298/155‑1 (MQ=255) gATTAATGGTGATGATGCCACGGCAAACAACAACGGCAAAACCAC‑CGTTGACGGTAAGGATTCCACCGGT‑ACGGAAATCAACGGT‑AATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAgg < 1:577857/224‑1 (MQ=255) gATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCAC‑CGTTGACGGCAAGGATTCCACCGGT‑ACGGAAATCAACGGT‑AATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCAATCGTGAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGAtcaa > 2:696926/1‑297 (MQ=11) aTTAATGGTGATGATGCCACATTAAACAACAACGGCAAAACCAC‑CGTTGACGGTAAGGATTCCACCGGT‑ACGGAAATCAACGTT‑AATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCAt < 2:123550/188‑1 (MQ=14) tacgggTGATAATGCCACAGTAAACAACAATGGCAAAACCAC‑CGTTGACGGTAAAGATTCCACCGGT‑ACGGAAATCAACGGT‑AATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGTGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACgg < 2:689632/296‑1 (MQ=11) tacgggTGATAAGGCCACAGTAAACAACAATGACAAAACCAC‑CGTGGACGGTAAAGATTCCACCGGT‑ACGGAAATCAACGGT‑AATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGTGGCGGCGGTCACGGTATTGATATCACCGTCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACgg < 2:695783/296‑1 (MQ=11) tAATGGTGATGACGCCACGGTAAACAACAACGGCAAAACCAC‑CGTTGACGGCAAGGATTCCACCGGT‑ACGGAAATCAACGGT‑AATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACgg < 2:695788/300‑1 (MQ=255) tAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCAC‑CGTTGACGGCAAGGATTCCACCGGT‑ACGGAAATCAACGGT‑AATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACgg < 1:579824/300‑1 (MQ=255) gataatgccacagtaaaCAACAATGGCAAAACCAC‑CGTTGACGGTAAAGATTCCACCGGT‑ACGGAAATCAACGGT‑AATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGAc > 1:69620/15‑300 (MQ=14) aCGGTAAACAACAACGGCAAAACCAC‑CGTTGACGGCAAGGATTCCACCGGT‑ACGGAAATCAACGGT‑AATAACGGAAAAGTGATTCAGGANGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGc < 2:555246/299‑1 (MQ=255) gCAAACAACAACGGCAAAACCAC‑CGTTGACGGCAAGGATTCCACCGGT‑ACGGAAATCAACGGT‑AATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCAACGGCACGCAGATTAACGGTGACGAAGCCACAGCAaac > 1:302350/1‑300 (MQ=255) taaaCAACAACGGCAAAACCAC‑CGTTGACGGTAAGGATTCCACCGGT‑ACGGAAATCAACGGT‑AATAACGGAAAAGTGATTCAGGANGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGc < 2:555638/294‑1 (MQ=255) ggCAAAACCAC‑CGTTGACGGTAAAGATTCCACCGGT‑ACGGAAATCAACGGT‑AATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGTGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCAACAACGGTGGCACCGGCACGCAGATTAACgg > 2:200366/1‑269 (MQ=11) aaaaCCGC‑CGTTTCCGGCAAGGATTCCACCTGT‑ACGGAAATCAACGGT‑AATAACGGAAAAGTTATTCAGGACTGCGATCTGGATGTCAGAGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGGGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAac < 2:85021/299‑1 (MQ=255) ac‑cGTTGACGGTAAAGATTCCACCGGT‑ACGGAAATCAACGGT‑AAGAACGGGAAAGTGATGCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGTGCACCATGACCGTCACCGATCCGGAGTCCATCGGTAGCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGt < 2:190868/299‑1 (MQ=14) tCCACCGGT‑ACGGAAATCAACGGT‑AATAACTGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGTCGGCTGTCACGGTATTGAGATCACCGGTGACAGCGAGACGGGGGATAACAAGGGTACCATGACCGNCACTGATCCGGAGGCCATCGGTATCCAGGTTGACGGCGGCTAGGCGGTTGGTAACAACGAAGGCGAGAGCGCCATCACCAACGGCGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCAcc < 2:218451/300‑1 (MQ=14) gT‑ACGGAAATCAACGGT‑AATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACgg < 2:586570/211‑1 (MQ=255) gT‑ACGGAAATCAACGGT‑AATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCAACAACGGTGGCACCGGCACTTAGATTAACGGTGATGACGCCACGGCGAATAACAAAGGCAAAACCACCGTTGACGGCAAAGATTCCACCGGTAc > 2:116148/1‑298 (MQ=255) gT‑ACGGAAATCAACGGT‑AATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCAGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCNCGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGAAAAACCACCGTTGACGGAAAGGATTCCACCGGTAc > 1:148201/1‑298 (MQ=255) gT‑ACGGAAATCAACGGT‑AATAACGGAAAAGTTATTCAGGACGGCAATCCGGACGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGAATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGATTGTCAACAACGAAGGCGAGAGCGCCATCACCAACGGCGGCACCGGCACGCAGATTAACGGTGACGACGCCACAGCGAACAACAACGACAAAaccac > 2:325535/1‑271 (MQ=17) gT‑ACGGAAATCAACGGT‑AATAACGAAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCAACGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCNCGCAGATTAACGGTGATGACGCCACAGCAAACACCAACGGCAAAACCACCGTTGACGGAAAAGATTCCACAGGTAc > 1:148432/1‑298 (MQ=255) at‑ACGGAAATCAACGGT‑AATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCCATCGTCAACAACGAAGGCGAGAGCGCCATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACACCACAGCGaacaacaa > 2:325438/2‑259 (MQ=11) | ATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCAC‑CGTTGACGGCAAGGATTCCACCGGT‑ACGGAAATCAACGGT‑AATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTAC > NC_000913/1466145‑1466704 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |