New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3720633 =	NA (NA)	91 (1.000)	47/588	0.5	NA	noncoding (1/1443 nt)	IS150	repeat region
	?	NC_000913	3762460 =	NA (NA)					coding (278/4134 nt)	rhsA	rhs element protein RhsA

AAACAAGGATGAGAAATGAGCGGAAAACCGGCAGCGCGTCAGGGCGACATGACGCAGTATGGCGGTAGCATTGTTCAGGGTTCAGCCGGGGTGCGCATTGGTGCCCCCACCGGCGTGGCCTGTTCGGTGTGCCCCGGCGGAGTGACGTCCGGCCATCCGGTCAATCCCCTGCTCGGTGCAAAGGTCCTTCCCGGTGAAACCGACATCGCCCTGCCCGGCCCGCTGCCGTTCATCCTCTCCCGCACCTACAGCAGTTACCGGACAAAAACGCCCGCGCCGGTGGGGAGCCTCGGCCCCGGCTGGAAAATGCCTGCGGATATCCGCTTACAGCTGCGCGATAACACACTGATACTCAGTGATAACGGCGGCAGAAGCCTGTATTTTGAGCACCTGTTTCCCGGTGAGGACGGTTACAGCCGCAGCGAGTCACTGTGGCTGGTGCGCGGCGGCGTGGCGAAACTGGATGAAGGTCACCGGCTGGCCGCACTCTGGCAGGCGCTGCCGGAAGAACTCCGCTTAAGTCCGCATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGGCTGCTCGGTTGGTGTGAGCGGGTG  >  NC_000913/3762168‑3762758                                                                                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                                                                                           aaaCAAGGATGAGAAATGAGCGGAAAACCGGCAGCGCGTCAGGTCGACATGACGCAGTATGGCGGTAGCATTGTTCAGGGTTCAGCCTGGGTGCGCATTGGTGCCCCCACCTGCGTGGCCTGTTCGGTGTGCCCCGGCGGAGTGACGTCCGGCCATCCGGTCAATCCCCTGCTCGGTGCAAAGGTCCTTCCCGGTGAAACCGACATCGCCCTGCCCGGCCCGCTGCCGTTCATCCTCTCCCGCACCTACAGCAGTTACCGGACAAAAACGCCCGCGCCGGTGGGGAGCCTCGGCCtgtac                                                                                                                                                                                                                                                                                                     >  2:397595‑M2/1‑295 (MQ=255) aaaCAAGGATGAGAAATGAGCGGAAAACCGGCAGCGCGTCAGGGCGACATGACGCAGTATGGCGGTAGCATTGTTCAGGGTTCAGCCGGGGTGCGCATTGGTGCCCCCACCGGCGTGGCCTGTTCGGTGTGCCCCGGCGGAGTGACGTCCGGCCATCCGGTCAATCCCCTGCTCGGTGCAAAGGTCCTTCCCGGTGAAACCGACATCGCCCTGCCCGGCCCGCTGCCGTTCATCCTCTCCCGCACCTACAGCAGTTACCGGACAAAAACGCCCGCGCCGGTGGGGAGCCTCGGCCtgtac                                                                                                                                                                                                                                                                                                     >  1:301802‑M2/1‑295 (MQ=255)      aGGATGAGAAATGAGCGGAAAACCGGCAGCGCGTCAGGGCGACATGACGCAGTATGGCGGTAGCATTGTTCAGGGTTCNGCCGGGGTGCGCATTGGTGCCCCCACCGGCGTGGCCTGTTCGGTGTGCCCCGGCGGAGTGACGTCCGGCCATCCGGTCAATCCCCTGCTCGGTGCAAAGGTCCTTCCCGGTGAAACCGACATCGCCCTGCCCGGCCCGCTGCCGTTCATCCTCTCCCGCACCTACAGCAGTTACCGGACAAAAACGCCCGCGCCGGTGGGGAGCCTCGGCCtgtactgacc                                                                                                                                                                                                                                                                                                >  1:154168‑M2/1‑290 (MQ=255)                  gcgcgGAAAACCGGCAGCGCGTCAGGGCGACATGACGCAGTATGGCGGTAGCATTGTTCAGGGTTCAGCCGGGGTGCGCATTGGTGCCCCCACCGGCGTGGCCTGTTCGGTGTGCCCCGGCGGAGTGACGTCCGGCCATCCGGTCAATCCCCTGCTCGGTGCAAAGGTCCTTCCCGGTGAAACCGACATCGCCCTGCCCTGCCCGCTGCCGTTCATCCTCTACCGCACCTACAGCAGTTACCGGACAAAAACGCCCGCGCCGGTGGGGAGCCTCGGCCtgtactgaccccaaaaagtt                                                                                                                                                                                                                                                                                      <  1:487188‑M2/296‑21 (MQ=255)                              ggcgccgcgtcaggGCGNCATGACGCAGTATGGCGGNAGCATTGCTCAGGGTTCAGCCGGGGTGCGCATTGGTGCCCCCACCGGCGTGGCCTGTTCGGTGTGCCCCGGCGGAGTGACGTCCGGCCATCCGGTCAATCCCCTGCTCGGTGCAAAGGTCCTTCCCGGTGAAACCGACATCGCCCTGCCCGGCCCGCTGCCGTTCATCCTCTGCCGCACCTACAGCAGTTACCGGACAAAAACGCCCGCGCCGGTGGGGAGCCTCGGCCtgtactgaccccaaaaanttggacagttaaacac                                                                                                                                                                                                                                                                        >  1:600564‑M2/6‑266 (MQ=255)                              ggCAGCGCGTCAGTGCGACATGACGCAGTATGGCGGTAGCATTGTTCAGGGTTCAGCCGGGGTGCGCATTGGTGCCCCCACCGGCGTGGCCTGTTCGGTGTGCCCCGGCGGAGTGACGTCCGGCCATCCGGTCAATCCCCTGCTCGGTGCAAAGGTCCTTCCCGGTGAAACCGACATCGCCCTGCCCGGCCCGCTGCCGTTCATCCTCTCCCGCACCTACAGCAGTTATCGGACAAAAACGCCCGCGCCGGTGGGGAGCCTCGGCCtgtactgaccccaaaaagttggacagttaaacac                                                                                                                                                                                                                                                                        >  1:230314‑M2/1‑266 (MQ=255)                              ggCAGCGCGTCAGGGCGACATGACGCAGTATGGCGGTAGCATTGTTCAGGGTTCAGCCGGGGTGCGCATTGGTGCCCCCACCGGCGTGGCCTGTTCGGTGTGCCCCGGTGGAGTGACGTCCGGCCATCCGGTCAATCCCCTGCTCGGTGCAAAGGTCCTTCCCGGTGAAACCGACATCGCCCTGCCCGGCCCGCTGCCGTTCATCCTCTCCCGCACCTACAGCAGTTACCGGACAAAAACGCCCGCGCCGGTGGGGAGCCTCGGCCtgtactgaccccaaaaagttggacagttaaacac                                                                                                                                                                                                                                                                        >  1:202954‑M2/1‑266 (MQ=255)                               gCAGCGCGTCAGGGCGACATGACGCAGTATGGCGGTAGCATTGTTCAGGGTTCAGCCGGGGTGCGCATTGGTGCCCCCACCGGCGTGGCCTGTTCGGTGTGCCCCGGCGGAGTGACGTCCGGCCATCCGGTCAATCCCCTGCTCGGTGCAAAGGTCCTTCCCGGTGAAACCGACATCGCCCTGCCCGGCCCGCTGCCGTTCATCCTCTCCCGCACCTACAGCAGTTACCGGACAAAAACGCCCGCGCCGGTGGGGAGCCTCGGCCtgtactgaccccaaaaagttggacagttaaacac                                                                                                                                                                                                                                                                        >  1:10378‑M2/1‑265 (MQ=255)                                         aGGGCGACATGACGCAGTATGGCGGTAGCATTGTTCAGGGTTCAGCCTGGGTGCGCATTGGTGCCCCCACCGGCGTGGCCTGTTCGGTGTGCCCCGGCGGAGTGACGTCCGGCCATCCGGTCAATCCCCTGCTCGGTGCAAAGGTCCTTCCCGGTGAAACCGACATCGCCCTGCCCGGCCCGCTGCCGTTCATCCTCTCCCGCACCTACAGCAGTTACCGGACAAAAACGCCCGCGCCGGTGGGGAGCCTCGGCCtgtactgaccccaaaaagttggacagttaaacacgaggcatatag                                                                                                                                                                                                                                                             >  2:433067‑M2/1‑255 (MQ=255)                                          gggCGACATGACGCAGTATGGCGGTAGCATTGTTCAGGGTTCAGCCGGGGTGCGCATTGGTGCCCCCACCGGCGTGGCCTGTTCGGTGTGCCCCGGCGGAGTGACGTCCGGCCATCCGGTCAATCCCCTGCTCGGTGCAAAGGTCCTTCCCGGTGAAACCGACATCGCCCTGCCCGGCCCGCTGCCGTTCATCCTCTCCCGCACCTACAGCAGTTACCGGACAAAAACGCCCGCGCCGGTGGGGAGCCTCGGCCtgtactgaccccaaaaagttggacagttaaacacgaggcatatagg                                                                                                                                                                                                                                                            >  1:614130‑M2/1‑254 (MQ=255)                                            gCGACATGACGCAGTATGGCGGTAGCATTGTTCAGGGTTCAGCCGGGGTGCGCATTGGTGCCCCCACCTGCGTGGCCTGTTCGGTGTGCCNCGGCGGAGTGACGTCCGGCCATCCGGTCAATCCCCTGCTCGGTGCAAAGGTCCTTCCCGGTGAAACCGACATCGCCCTGCCCGGCCCGCTGCCGTTCATCCTCTCCCGCACCTACAGCAGTTACCGGACAAAAACGCCCGCGCCGGTGGGGAGCCTCGGCCtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtc                                                                                                                                                                                                                                                          >  2:553508‑M2/1‑252 (MQ=255)                                            gCGACATGACGCAGTATGGCGGTAGCATTGTTCAGGGTTCAGCCGGGGTGCGCATTGGTGCCCCCACCGGCGTGGCCTGTTCGGTGTGCCCCGGCGGAGTGACGTCCGGCCATCCGGTCAATCCCCTGCTCGGTGCAAAGGTCCTTCCCGGTGAAACCGACATCGCCCTGCCCGGCCCGCTGCCGTTCATCCTCTCCCGCACCTACAGCAGTTACCGGACAAAAACGCCCGCGCCGGTGGGGAGCCTCGGCCtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtc                                                                                                                                                                                                                                                          >  1:14303‑M2/1‑252 (MQ=255)                                            gCGACATGACGCAGTATGGCGGTAGCATTGTTCAGGGTTCAGCCGGGGTGCGCATTGGTGCCCCCACCGGCGTGGCCTGTTCGGTGTGCCCCGGCGGAGTGACGTCCGGCCATCCGGTCAATCCCCTGCTCGGTGCAAAGGTCCTTCCCGGTGAAACCGACATCGCCCTGCCCGGCCCGCTGCCGTTCATCCTCTCCCGCACCTACAGCAGTTACCGGACAAAAACGCCCGCGCCGGTGGGGAGCCTCGGCCtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtc                                                                                                                                                                                                                                                          >  2:450542‑M2/1‑252 (MQ=255)                                               aCATGACGCAGTATGGCGGTAGCATTGTTCAGGGTTCAGCCGGGGTGCGCATTGGTGCCCCCACCGGCGTGGCCTGTTCGGTGTGCCCCGGCGGAGTGACGTNCGGCCATCCGGTCAATCCCCTGCTCGGTGCAANGGTCCTTCCCGGTGAAACCGACATCGCCCTGCCCGGCCCGCTGCCGTTCATCCTCTCCCGCACCTACAGCAGTTACCGGACAAAAACGCCCGCGCCGGTGGGGAGCCTCGGCCtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctga                                                                                                                                                                                                                                                       <  2:536175‑M2/300‑52 (MQ=255)                                               aCATGACGCAGTATGGCGGTAGCATTGTTCAGGGTTCAGCCGGGGTGCGCATTGGTGCCCCCACCGGCGTGGCCTGTTCGGTGTGCCCCGGCGGAGTGACGTCCGGCCATCCGGTCAATCCCCTGCTCGGTGCAAAGGTCCTTCCCGGTGAAACCGACATCGCCCTGCCCGGCCCGCTGCCGTTCATCCTCTCCCGCACCTACAGCAGTTACCGGACAAAAACGCCCGCGCCGGTGGGGAGCCTCGGCAtgtactgacccaaaaaagttggacagttaaacacgaggcatataggtctga                                                                                                                                                                                                                                                       <  2:354676‑M2/300‑52 (MQ=255)                                                       cAGTATGGCGGTAGCATTGTTCAGGGTTCAGCCGGGGTGCGCATTGGTGCCCCCACCGGCGTGGCCTGTTCGGTGTGCCCCGGCGGAGTGACGTCCGGCCATCCGGTCAATCCCCTGCTCGGTGCAAAGGTCCTTCCCGGTGAAACCGACATCGCCCTGCCCGGCCCGCTGCCGTTCATCCTCTCCCGCACCTACAGCAGTTACCGGACAAAAACGCCCGCGCCGGTGGGGAGCCTCGGCCtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgata                                                                                                                                                                                                                                               <  1:350800‑M2/300‑60 (MQ=255)                                                         gTATGGCGGTAGCATTGTTCAGGGTTCAGCCGGGGTGCGCATTGGTGCCCCCACCGGCGTGGCCTGTTCGGTGTGCCCCGGCGGAGTGACGTCCGGCCATCCGGTCAATCCCCTGCTCGGTGCAAAGGTCCTTCCCGGTGAAACCGACATCGCACTGCCCGGCCCGCTGCCGTTCATCCTCTACCGCACCTACAGCAGTTACCGGACAAAAACGCCCGCGCCGGTGGGGAGCCTCGGCCtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatatt                                                                                                                                                                                                                                             <  2:449372‑M2/300‑62 (MQ=255)                                                         gTATGGCGGTAGCATTGTTCAGGGTTCAGCCGGGGTGCGCATTGGTGCCCCCACCGGCGTGGCCTGTTCGGTGTGCCCCGGCGGAGTGACGTCCGGCCATCCGGTCAATCCCCTGCTCGGTGCAAAGGTCCTTCCCGGTGAAACCGAAATCGCCCTGCCCGGCCCGCTGCCGTTCATCCTCTCCCGCACCTACAGCAGTTACAGGACAAAAACGCCCGCGCCGGTGGGGAGCCTCGGCCtgtaatgaccccaaaaagttggacagttaaacaagaggcatataggtctgattccgatatt                                                                                                                                                                                                                                             <  2:274391‑M2/300‑62 (MQ=255)                                                         gTATGGCGGTAGCATTGTTCAGGGTTCAGCCGGGGTGCGCATTGGTGCCCCCACCGGCGTGGCATGTTCGGTGTGCCCCGGCGGAGTGACGTCCGGCCATCCGGTCAATCCCCTGCTCGGTGCAAAGGTCCTTCCCGGTGAAACCGACATCGCCCTGCCCGGCCCGCTGCCGTTCATCCTCTCCCGCACCTACAGCAGTTACCGGACAAAAACGCCCGCGCCGGTGGGGAGCCTCGGCCtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatatt                                                                                                                                                                                                                                             <  2:598042‑M2/300‑62 (MQ=255)                                                         gTATGACGGTAGCATTGTTCAGGGTTCAGCCGGGGTGCGCATTGGTGCCCCCACCGGCGTGGCCTGTTCGGTGTGCCCCGGCGGAGTGACGTCCGGCCATCCGGTCAATCCCCTGCTCGGTGCAAAGGTCCTTACCGGTGAAACCGACATCGCCCTGCCCGGCCCGCTGCCGTTCATCCTCTACCGCACCTACAGCAGTTACCGGACAAAAACGCCCGCGCNGGTGGGGAGCCTCGGCCtgtactgaccccaaaaagctggacagttaaacacgaggcatataggtctgattccgatatt                                                                                                                                                                                                                                             <  1:524181‑M2/300‑62 (MQ=255)                                                              tcgttagcaTTGTTCAGGGTTCAGCCGGGGTGCGCATTGGTGCCCCCACCGGCGTGTCCTGTTCGGTGTGCCCCGGCGGAGTGACGTCCGGCCATCCGGTCAATCCCCTGCTCGGTGCAAAGGTCCTTCCCGGTGAAACCGACATCGCCCTGCCCGGCCCGCTGCCGTTCATCCTCTCCCGCACCTACAGCAGTTACCGGACAAAAACGCCCGCGCCGGTGGGGAGCCTCGGCCgggactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccatattcaattg                                                                                                                                                                                                                                        >  2:455523‑M2/5‑234 (MQ=255)                                                                         gTTCAGGGTTCAGCCGGGGTGCGCATTGGTGCCCCCACCGGCGTGGCCTGTTCGGTGTGCCCCGGCGGAGTGACGTCCGGCCATCCGGTCAATCCCCTGCTCGGTGCAACGGTCCTTCCCGGTGAAACCGACATCGCCCTGCCCGGCCCGCTGCCGTTCATCCTCTACCGCACCTACAGCAGTTACCGGACAAAAACGCCCGCGCAGGTGGGGAGCCTCGGCCtgtactgaccccaaaaagttggacagttaaacccgaggcatataggtctgattccgatattcaattggagtcagacc                                                                                                                                                                                                                             <  1:638234‑M2/300‑78 (MQ=255)                                                                         gTTCAGGGTTCAGCCGGGGTGCGCATTGGTGCCCCCACCGGCGTGGCCTGTTCGGTGTGCCCCGGCGGAGTGACGTCCGGCCATCCGGTCAATCCCCTGCTCGGTGCAAAGGTCCTTCCCGGTGAAACCGACATCGCCCTGCCCGGCCCGCTGCCGTTCATCCTCTCCCGCACCTACAGCAGTTACCGGACAAAAACGCCCGCGCCGGTGGGGAGCCTCGGCCtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagacc                                                                                                                                                                                                                             <  1:297622‑M2/300‑78 (MQ=255)                                                                         gTTCAGGGTTCAGCCGGGGTGCGCATTGGTGCCCCCACCGACGTGGCCTGTTCGGTGTGCCCCAGCGGAGTGACGTCCGGCCATCCGGTCAATCCCCTGCTCGGTGCAAAGGTCCTTACCGGTGAAACCGACATCGCCCTGCCCGGCCCGCTGCCGTTCATCCTCTCCCGCACCTACAGCAGTTACCGGACAAAAACGCCCGCGCCGGTGGGGAGCCTCGGCCtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatcttcaattggagtcagacc                                                                                                                                                                                                                             <  1:638338‑M2/300‑78 (MQ=255)                                                                                gTTCAGCCGGGGTGCGCATTGGTGCCCCCACCGGCGTGGCCTGTTCGGTGTGCCCCGGCGGAGTGACGTCCGGCCATCCGGTCAATCCCCTGCTCGGTGCAAAGGTCCTTCCCGGTGAAACCGACATCGCCCTGCCCGGCCCGCTGCCGTTCATCCTCTCCCGCGCCTACAGCAGTTACCGGACAAAAACGCCCGCGCCGGTGGGGAGCCTCGGCCtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaat                                                                                                                                                                                                                      <  2:584078‑M2/300‑85 (MQ=255)                                                                                                             aCCGGCGTGGCCTGTTCGGTGTGCCCCGGCGGAGTGACGTCCGGCCATCCGGTCAATCCCCTGCTCGGTGCAAAGGTCCTTCCCGGTGAAACCGACATCGCCCTGCGCGGCCCGCTGCCGTTCATCCTCTCCCGCACCTACAGCAGTTACCGGACAAAAACGCCCGCGCCGGTGGGGAGCCTCGGCCtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattcttctgctgttgtag                                                                                                                                                                                           >  1:425830‑M2/1‑187 (MQ=255)                                                                                                                ggCGTGGCATGTTCGGTNTGCCCCGGCGGAGTGACGNCCGGCCATCCGGTCAATCCCCTGCTCGGTGCAAAGGTCCTTCCCGGTGAAACCGACATCGCCCTGCCCGGCCCGCTGCCGTTCATCCTCTCCCGCACCTACAGCAGTTACCGGACAAAAACGCCCGCGCCGGTGGGGAGCCTCGGCCtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattcttntgctgttgtagtattc                                                                                                                                                                                      >  1:598042‑M2/1‑184 (MQ=255)                                                                                                                     ggCCTGTTCGGTGTGCCCCGGCGGAGTGACGTCCGGCCATCCGGTCAATCCCCTGCTCGGTGCAAAGGTCCTTCCCGGTGAAACCGACATCGCCCTGCCCGGCCCGCTGCCGTTCATCCTCTCCCGCACCTACAGCAGTTACCGGACAAAAACGCCCGCGCCGGTGGGGAGCCTCGGCCtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattcttctgctgttgtagtattcaatat                                                                                                                                                                                 <  1:269330‑M2/300‑122 (MQ=255)                                                                                                                         tGTTCGGTGTGCCCCGGCGGAGTGACGTCCGGCCATCCGGTCAATCCCCTGCTCGGTGCAAAGGTCCTTCCCGGTGNAACCGACATCGCCCTGCCCGGCCCGCTGCCGTTCATCCTCTCCCGCACCTACAGCAGTTACCGGACAAAAACGCCCGCGCCGGTGGGGAGCCTCGGCCtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattcttctgctgttgtagtattcaatatat                                                                                                                                                                               >  1:524696‑M2/1‑175 (MQ=255)                                                                                                                          gTTCGGTGTGCCCCGGCGGAGTGACGTCCGGCCATCCGGTCAATCCCCTGCTCGGTGCAAAGGTCCTTCCCGGTGAAACCGACATCGCCCTGCCCGGCCCGCTGCCGTTCATCCTCTCCCGCACCTACAGCAGTTACCGGACAAAAACGCCCGCGCCGGTGGGGAGCCTCGGCCtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttccggctaattcttctgctgttgtagtattcaatatattcc                                                                                                                                                                            <  1:669463‑M2/300‑127 (MQ=255)                                                                                                                          gTTCGGTGTGCCCCGGCGGAGTGACGTCCGGCCATCCGGTCAATCCCCTGCTCGGTGCAAAGGTCCTTCCCGGTGAAACCGACATCGCCCTGCCCGGCCCGCTGCCGTTCATCCTCTCCCGCACCTACAGCAGTTACCGGACAAAAACGCCCGCGCCGGTGGGGAGCCTCGGCCtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattcttctgctgttgtagtattcaatatattcc                                                                                                                                                                            >  2:647735‑M2/1‑174 (MQ=255)                                                                                                                          gTTCGGTGTGCCCCGGCGGAGTGACGTCCGGCCATCCGGTCAATCCCCTGCTCGGTGCAAAGGTCCTTCCCGGTGAAACCGACATCGCCCTGCCCGGCCCGCTGCCGTTCATCCTCTCCCGCACCTACAGCAGTTACCGGACAAAAACGCCCGCGCCGGTGGGGAGCCTCGGCCtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattcttctgctgttgtagtattcaatatattcc                                                                                                                                                                            >  1:543014‑M2/1‑174 (MQ=255)                                                                                                                               gtgtGCCCCGGCGGAGTGACGTCCGGCCATCCGGTCAATCCCCTGCTCTGTGCAAAGGTCCTTCCCGGTGAAACCGACATCGCCCTGCCCGGCCCGCTGCCGTTCATCCTCTCCCGCACCTACAGCAGTTACCGGACAAAAACGCCCGCGCCGGTGGGGAGCCTCGGCCtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattcttctgctgttgtagtattcaatatattccgtaac                                                                                                                                                                       >  2:579208‑M2/1‑169 (MQ=255)                                                                                                                                   gCCCCGGCGGAGTGACGTCCGGCCATCCGGTCAATCCCCTGCTCGGTGCAAAGGTCCTTACCGGTGAAACCGACATCGCCCTGCCCGGCCCGCTGCCGTTCATCCTCTCCCGCACCTAAAGCAGTTAACGGACGAAAACGCACGCGCCGGTGGGGAGCCTAGGACtgtactgaccacaaaaagttggacagttaaacacgaggaatataggtctggttccgatattcaattggagtcagaccttttaatttcaggctaattcttctgctgttgtagtattcaatatattccgtagcagca                                                                                                                                                                   <  2:381010‑M2/300‑136 (MQ=255)                                                                                                                                   gCCCCGGCGGAGTGACGTCCGGCCATCCGGTCAATCCCCTGCTCGGTGCAAAGGTCCTTACCGGTGAAACCGACATCGACCTGCCCGGCCCGCTGCCGTTCATCCTCTCCCGCACCTACAGCAGTTACCGGACAAAAACGCCCGCGCCGGTGGGGAGCCTCGGCCtgtactgcccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattcttctgctgttgtagtattcaatatattccgtagcagca                                                                                                                                                                   <  2:380370‑M2/300‑136 (MQ=255)                                                                                                                                        ggcggAGTGACGTCCGGCCATCCGGTCAATCCCCTGCTCGGTGCAAAGGTCCTTCCCGGTGAAACCGACATCGCCCTGCCCGGCCCGCTGCCGTTCATCCTCTCCCGCACCTACAGCAGTTACCGGACAAAAACGCCCGCGCCGGTGGGGAGCCTCGGCCtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattcttctgctgttgtagtattcaatatattccgtaacagcatcc                                                                                                                                                                >  1:410308‑M2/1‑160 (MQ=255)                                                                                                                                           ggAGTGACGTCCGGCCATCCGGTCAATCCCCTGCTCGGTGCAAAGGTCCTTCCCGGTGAAACCGACATCGCCCTGCCCGGCCCGCTGCCGTTCATCCTCTCCCGCACCTACAGCAGTTACCGGACAAAAACGCCCGCGCCGGTGGGGAGCCTCGGCCtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattcttctgctgttgtagtattcaatatattccgtaacagcatccttcag                                                                                                                                                           >  1:274391‑M2/1‑157 (MQ=255)                                                                                                                                                       ggCCATCCGGTCAATCCCCTGCTCGGGGCAAAGGTCCTTCCCGGTGAAACCGACATCGCCCTGCCCGGCCCGCTGCCGTTCATCCTCTCCCGCACCTACAGCAGTTACCGGACAAAAACGCCCGCGCCGGTGGGGAGCCTCGGCCggtactgaccccaaaaagttggacagttaaacactaggcatataggtctgatgccgatattcaattggagtcagaccttttaatttcaggctaattcttctgctgttgtagtattcaatatattccgtaacggcatccttcagttcgcttatatt                                                                                                                                               >  2:631912‑M2/1‑145 (MQ=255)                                                                                                                                                               ggTCAATCCCCTTCTCGGTGCAAAGGTCCTTCCCGGTGAAACCGACATCGCCCTGCCCGGCCCGCTGCCGTTCATCCTCTCCCGCACCTACAGCAGTTACCGGACAAAAACGCCCGCGCCGGTGGGGAGCCTCGGCCtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattcttctgctgttgtagtattcaatatattccgtaacagcatccttcagttcgcttatattactgaact                                                                                                                                       <  1:693395‑M2/300‑164 (MQ=255)                                                                                                                                                               ggTCAATCCCCTGCTCGGTGCAAAGGTCCTTCCCGGTGAAACCGACATCGCCCTGCCCGGCCCGCTGCCGTTCATCCTCTACCGCACCTACAGCAGTTACCGGACAAAAACGCCCGCGCCGGTGGGGAGCCTCGGCCtgtactgaccccaaaaagttggacagttaaacacgaggcatatagatctgattccgatattcaattggagtcagaccttttaatttcaggctaattcttctgctgttgtagtattcaatatattccgtaacagcatccttcagttcgcttatattactgaact                                                                                                                                       <  2:145232‑M2/300‑164 (MQ=255)                                                                                                                                                               ggTCAATCCCCTGCTCGGTGCAAAGGTCCTTCCCGGTGAAACCGACATCGCACTGCCCGGCCCGCTGCCGTTCATCCTCTACCGCACCTACAGCAGTTACCGGACAAAAACGCCCGCGCCGGTGGGGAGCCTCGGCCtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctacttcttatgctgttgtagtattcaatatattccgtaacagcatccttcagttcgcttatattactgaact                                                                                                                                       <  2:288788‑M2/300‑164 (MQ=255)                                                                                                                                                               ggTCAATCCCCTGCTCGGTGCAAAGGTCCTTACCGGTGAAACCGACATCGCCCTGCCCGGCCCGTTGCCGTTCATCCTCTCCCGCACCTCCAGCAGTTACCGGCCAAAAACGCCCGCGCCGGTGGGGAGCCTCGGCCtgtactgaccccaaaaagttggacaattaaacacgaggcatacaggtctgattccgatattcaattggagtcagaccttttaatttaaggctacttcttctgctgttgtaggatttaatatactccgtaacagcatacttcagtttgattatactactgaact                                                                                                                                       <  2:275613‑M2/300‑164 (MQ=255)                                                                                                                                                                                gTGCAAAGGTCCTTCCCGGTGAAACCGACATCGCACTGCCCGGCCCGCTGCCGTTCATCCTCTCCCGCACCTACAGCAGTTACCGGACAAAAACGCCCGCGCCGGTGGGGAGCCTCGGCCtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattcttctgctgttgtagtattcaatatattccgtaacagcatccttcagttcgcttatattactgaactcatcaagataaaaacac                                                                                                                      <  2:279833‑M2/300‑181 (MQ=255)                                                                                                                                                                                       ggTCCTTCCCGGTGAAACCGACATCGCCCTGCCCGGCCCGCTGCCGTTCATCCTCTCCCGCACCTACAGCAGTTACCGGACAAAAACGCCCGCGCCGGTGGGGAGCCTCGGCCtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattcttctgctgttgtagtattcaatatattccgtaacagcatccttcagttcgcttatattactgaactcatcaagataaaaacactccgact                                                                                                               <  1:267105‑M2/300‑188 (MQ=255)                                                                                                                                                                                                             aTCGCCCTGCTCGGCCCGCTGCCGTTCATCCTCTCCCGCACCTACAGCAGTTACCGGACAAAAACGCCCGCGCCGGTGGGGAGCCTCGGCCtgtactgaccccaaaaagttgtacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttagtttcaggctaattctcctgctgttttagtattcaatatattccgtaacagcatccttcagttcgcttatattactgaactcatcaagataaaaacactccgactttaaggttccaaagaaacactc                                                                                         >  1:236637‑M2/1‑91 (MQ=255)                                                                                                                                                                                                             aTCGCCCTGCCCGGCCCGCTGCCGTTCATCCTCTCCCGCACCTACAGCAGTTACCGGACAAAAACGCCCGCGCCGGTGGGGAGCCTCGGCCtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattcttctgctgttgtagtattcaatatattccgtaacagcatccttcagttcgcttatattactgaactcatcaagataaaaacactccgactttaaggttccaaagaaacactc                                                                                         >  1:236359‑M2/1‑91 (MQ=255)                                                                                                                                                                                                                gcactgcCCGGCCCGCTGCCGTTCATCCTCTCCCGCACCTACAGCAGTTACCGGACAAAAACGCCCGCGCCGGTGGGGAGCCTCGGCCtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattcttctgctgttgtagtattcaatatattccgtaacagcatccttcagttcgcttatattactgaactcatcaagataaaaacactccgactttaaggttccaaagaaacactccac                                                                                      <  1:391711‑M2/297‑213 (MQ=255)                                                                                                                                                                                                                gCCCTGCCCGGCCCGCTGCCGTTCATCCTCTCCCGCACCTACAGCAGTTACCGGACAAAAACGCCCGCGCCGGTGGGGAGCCTCGGCCtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattcttctgctgttgtagtattcaatatattccgtaacagnatccttcagttcgcttatattactgaactcatcaagataaaaacactccgactttaaggttccaaagaaacactccac                                                                                      <  1:149220‑M2/300‑213 (MQ=255)                                                                                                                                                                                                                gCCCTGCCCGGCCCGCTGCCGTTCATCCTCTCCCGCACCTACAGCAGTTACCGGACAAAAACGCCCGCGCCGGTGGGGAGCCTCGGCCtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattcttctgctgttgtagtattcaatatattccgtaacagcatccttcagttcgcttatattactgaactcatcaagataaaaacactccgactttaaggttccaaagaaacactccac                                                                                      <  1:391806‑M2/300‑213 (MQ=255)                                                                                                                                                                                                                gCCCTGCCCGGCCCGCTGCCGTTCATCCTCTCCCGCACCTACAGCAGTTACCGGACAAAAACGCCCGCGCCGGTGGGGAGCCTCGGCCtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattcttctgctgttgtagtattcaatatattccgtaacagcacccttcagttcgcttatattactgaactcatcaagataaaaacaatccgacttcaaggttccaaagaaacactcc                                                                                        <  1:391000‑M2/298‑211 (MQ=255)                                                                                                                                                                                                                gCCCTGCCCGGCCCGCTGCCGTTCATCCTCTCCCGCACCTACAGCAGTTACCGGACAAAAACGCCCGCGCCGGTGGGGAGCATCGGCCtgtactgaccccaaaaagttggacagttaaacacgaggaatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattcttctgctgttgtagtattcaatatattccgtaacagcatccttcagttcgcttatattactgaactcatcaagataaaaacactccgaatttacggttccaaagaaacactccac                                                                                      <  1:391792‑M2/300‑213 (MQ=255)                                                                                                                                                                                                                     gcccggcccgCTGCCGTTCATCCTCTCCCGCACCTACAGCAGTTACCGGACAAAAACGCCCGCGCCGGTGGGGAGCCTCGGCCtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattcttctgctgttgtagtattcaatatattccgtaacagcatccttcagttcgcttatattactgaactcatcaagataaaaacactccgactttaaggttccaaagaaacactccaccaca                                                                                  <  1:414356‑M2/299‑217 (MQ=255)                                                                                                                                                                                                                            ccgCTGCCGTTCATCCTCTCCCGCACCTACAGCAGTTACCGGACAAAAACGCCCGCGCAGGTGGGGAGCCTCGGCCtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattcttctgctgttgtagtattcaatatattccgtaacagcatccttcagttngcttatattactgaactcatcaagataaaaacactccgactttaaggttccaaagaaacactccaccacagcattatc                                                                          <  1:139830‑M2/300‑225 (MQ=255)                                                                                                                                                                                                                              gCTGCCGTTCATCCTCTCCCGCACCTACAGCAGTTACCGGACAAAAACGCCCGCGCCGGTGGGGAGCCTCGGCCtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattcttctgctgttgtagtattcaatatattccgtaacagcatccttcagttcgcttatattactgaactcatcaagataaaaacactccgactttaaggttccaaagaaacactccaccacagcattatcca                                                                        <  1:41488‑M2/300‑227 (MQ=255)                                                                                                                                                                                                                              gCTGCCGTTCATCCTCTCCCGCACCTACAGCAGTTACCGGACAAAAACGCCCGCGCCGGTGGGGAGCCTCGGCCtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattcttctgctgttgtagtattcaatatattccgtaacagcatccttcagttcgcttatattactgaactcatcaagataaaaacactccgactttaaggttccaaagaaacactccaccacagcattatcc                                                                         >  1:584078‑M2/1‑74 (MQ=255)                                                                                                                                                                                                                                                    aCCTACAGCAGTTACCNGACAAAAACGCCCGCGCCGGTGGGGAGCCTCGGCCtgtactgaccccacaaagttggacagttaaccacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattcttctgctgttgtagtattcaatatattccgtaacagcatccttcagttcgcttatattactgaactcatcaagataaaaacactccgactttaaggttccaaagaagcactccancacagcattattcagacanttgccttttctgga                                                     <  1:604146‑M2/297‑246 (MQ=255)                                                                                                                                                                                                                                                    aCCTACAGCAGTTACCNGACAAAAACGCCCGCGCCGGTGGGGAGCCTCGGCCtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattcttctgctgttgtagtattcaatatattccgtaacagcatccttcagttcgcttatattactgaactcatcaagataaaaacactccgactttaaggttccaaagaaacactccancacagcattatccagacanttgccttttctggacat                                                  <  1:603895‑M2/300‑249 (MQ=255)                                                                                                                                                                                                                                                    aCCTACAGCAGTTACCNGACAAAAACGCCCGCGCCGGTGGGGAGCCTCGGCCtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattcttctgctgttgtagtattcaatatattccgtaacagcatccttcagttcgcctatattactgaactcatcaagataaaaacactccgactttaaggttccaaagaaacactccancacagcattatccagacanttgccttttctggacat                                                  <  1:604012‑M2/300‑249 (MQ=255)                                                                                                                                                                                                                                                    aCCTACAGCAGTTACCGGACAAAAACGCCCGCGCCGGTGGGGAGCGTAGGCAtgtaatgacccaaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattcttctgctgttgtagtattcaatatattccgtaacagcatccttaagttcgcttatattactgaactcataaagataaaaacactccgcctttaaggttccaaagaaacactccaccacagcattatccagataattgtcttttctggacat                                                  <  1:485829‑M2/300‑249 (MQ=255)                                                                                                                                                                                                                                                    aCCTACAGCAGTTACCGGACAAAAACGCCCGCGCCGGTGGGGAGCCTCGGCCtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattcttctgctgttgtagtattcaatatattccgtaacagcatccttcagttcgcttatattactgaactcatcaagataaaaacactccgactttaaggttccaaagaaacactccaccacagcattatccagacaattgccttttctggacat                                                  <  1:244877‑M2/300‑249 (MQ=255)                                                                                                                                                                                                                                                     ccTACAGCAGTTACCGGACAAAAACGCCCGCGCCGGTGGGGAGCCTCGGCCtgtactgaccccaaaaagttggacagttaaac                                                                                                                                                                                                                                                                          >  2:417799‑M2/1‑51 (MQ=255)                                                                                                                                                                                                                                                     ccTACAGCAGTTACCGGACAAAAACGCCCGCGCCGGTGGGGAGCCTCGGCCtgtactgaccccaaaaagttggacagttaaac                                                                                                                                                                                                                                                                          <  1:417799‑M2/83‑33 (MQ=255)                                                                                                                                                                                                                                                               ttACCGGACAAAAACGCCCGCGCCGGTGGGGAGCCTCGGCCtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattcttatgctgttgtagtattcaatatattccgtaacagcatccttcagttcgcttatattactgaactcctcaagataaaaacactccgactttaaggttccaaagaaacactccaccacagcattatccagacaattgccttttctggacatgctttgtttca                                       <  2:697056‑M2/300‑260 (MQ=255)                                                                                                                                                                                                                                                                     gACAAAAACACCCGCGCCGGGGGGGAGCCTCGGCCtgtactgaccccaaaaagttggacagttaaacacgaggcatatagggctgattccgatattcaattggagtcagaccttttaatttcaggctaattcttctgctgttgtagtattcaatatattccgtaacagcatccttcagttcgcttatattactgaactcatcaagataaaaacactccgactttaaggttccaaagaaacactccaccacagcattatccagacaattgccttttctggacatgctttgtttaatac                                    >  2:476655‑M2/1‑35 (MQ=255)                                                                                                                                                                                                                                                                                                    ggCCtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattcttctgctgttgtagtattcaatatattccgtaacagcatccttcagttcgcttatattactgaactcatcaagataaaaacactccgactttaaggttccaaagaaacactccaccacagcattatccagccaattgcattttctggacatgctttgtttcataccatgttctttaaggatattttgatatcttctcat  <  2:41911‑M2/300‑297 (MQ=255)                                                                                                                                                                                                                                                                                                    ggCCtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattcttctgctgttgtagtattcaatatattccgtaacagcatccttcagttcgcttatattactgaactcatcaagataaaaacactccgactttaaggttccaaagaaacactccaccacagcattatccagacaattgccttttctggacatgctttgtttcataccatgttctttaaggatattttgatatcttctcat  <  1:632715‑M2/300‑297 (MQ=255)                                                                                                                                                                                                                                                                                                    ggCCtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattcttctgctgttgtagtattcaatatattccgtaacagcatccttcagttcgcttatattactgaactcatcaagataaaaacactccgactttaaggttccaaagaaacactccaccacagcattatccagacaattgccttttctggacatgctttgtttaataccatgttctttaaggatattttgatatcttctcat  <  1:12990‑M2/300‑297 (MQ=255)                                                                                                                                                                                                                                                                                                    ggCCtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattcttctgctgttgtagtattcaatatattccgtaacagcatccttcagttcgcttatattactgaactcatcaagataaaaacactccgactttaaggttccaaagaaacactccaccacagcattatccagacaattgccttttctggacatgctttgtttaataccatgttctttaaggatattttgatatcttctaat  <  1:632619‑M2/300‑297 (MQ=255)                                                                                                                                                                                                                                                                                                    ggCCtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattcttctgctgttgtagtattcaatatattccgtaacagcatccttcagttcgcttatattactgaactcatcaagataaaaacactccgactttaaggttccaaagaaacactccaacacagcattatccagacaattgccttttctggacatgctttgtttaatgccatgttctttcaggatattttgatatcttctcat  <  1:505631‑M2/300‑297 (MQ=255)                                                                                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                                                                                           AAACAAGGATGAGAAATGAGCGGAAAACCGGCAGCGCGTCAGGGCGACATGACGCAGTATGGCGGTAGCATTGTTCAGGGTTCAGCCGGGGTGCGCATTGGTGCCCCCACCGGCGTGGCCTGTTCGGTGTGCCCCGGCGGAGTGACGTCCGGCCATCCGGTCAATCCCCTGCTCGGTGCAAAGGTCCTTCCCGGTGAAACCGACATCGCCCTGCCCGGCCCGCTGCCGTTCATCCTCTCCCGCACCTACAGCAGTTACCGGACAAAAACGCCCGCGCCGGTGGGGAGCCTCGGCCCCGGCTGGAAAATGCCTGCGGATATCCGCTTACAGCTGCGCGATAACACACTGATACTCAGTGATAACGGCGGCAGAAGCCTGTATTTTGAGCACCTGTTTCCCGGTGAGGACGGTTACAGCCGCAGCGAGTCACTGTGGCTGGTGCGCGGCGGCGTGGCGAAACTGGATGAAGGTCACCGGCTGGCCGCACTCTGGCAGGCGCTGCCGGAAGAACTCCGCTTAAGTCCGCATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGGCTGCTCGGTTGGTGTGAGCGGGTG  >  NC_000913/3762168‑3762758

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.