New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 781222	58 (0.630)	7 (0.100)	7/436	4.7	13.5%	noncoding (76/76 nt)	lysY	tRNA‑Lys
	?	NC_000913	781653 =	47 (0.690)					intergenic (+1/‑432)	lysQ/nadA	tRNA‑Lys/quinolinate synthase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

ATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATC‑AAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTA‑AAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGAC  >  NC_000913/780927‑781514                                                                                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                                                                                       aTCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCATTACAAGGAGGGGGTCGGCGGTTCGATCCCGTAATCACCCACCACTCGGGTTGTTAGCTCAGTTGGTCGAGCAGTTGACTTTTAATCAATTGGTCGCAGATTCGAATCCTGCACGACCCACCAGttt                                                                                                                                                                                                                                                                                                    >  1:88465/1‑300 (MQ=255)           gATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCACTCATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCCCCTACCTTCCAAGGAGGGGGTCGGCGGTTCGCTCCCGTCATCACCCCCCACTNGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAAtttaaaggtggtt                                                                                                                                                                                                                                                                                          >  2:560340/1‑290 (MQ=21)                        tAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCAACCACAACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCCATTGGTCGCAGGTTCGAATCCTGCACGCACCACCAATTTCAAAATC‑AAACTCAGATGTTaa                                                                                                                                                                                                                                                                             >  2:285158/1‑299 (MQ=25)                          ggATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTATAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTCACAAGGAGGGGGTCGGCGGTTCGATCAAGTCATCACCAACCACTCGGGTAGTTAGCTCAGTTGGTAGGGCAGTTGACTTTTACTCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATC‑ACACTcgggt                                                                                                                                                                                                                                                                                  >  2:15876/1‑288 (MQ=21)                               aCGTTGCGTCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGTAGTATCGGGTGATTAGTTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTAGTTCGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTTCACGAACACCCAGTTTTAACATC‑AAACTCCGATGTTACGCGTGaa                                                                                                                                                                                                                                                                      >  2:30274/1‑299 (MQ=21)                                      gTCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCACTACTGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCTTGTGATTAGCGCAGCTGGGAGAGCACCNCCCGTACAAGTAGGGGGTCGGCGGTGCGATCCCTTCATCACCCACCACTCGGTTCGTGAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATC‑AAACTCAGATGTTAAGCGTGAAGGATAAc                                                                                                                                                                                                                                                               <  2:219461/299‑1 (MQ=21)                                       gcAGCAAAGGTCCTTAGGGCAATCGAAGCGAGGCATCCGGCACGACCCACCACTAATTACGGTTGGTTCGGTGGAGGTAGGTTGTAGTATCCAACACAGTAGCGGGTGAGTAGCTCAGCTGGGAGAGCACCCCCCTTGCAAGGAGGGGGTCGGCTGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATC‑AAACTCAGATGTTAAGCGTGAAGGATAACGt                                                                                                                                                                                                                                                             <  1:129180/299‑1 (MQ=17)                                                                    gaGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAGGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATC‑AAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGgcgagc                                                                                                                                                                                                                                 >  2:497412/1‑299 (MQ=255)                                                                    gaGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTTAACATC‑AAACTCAGATGCTAAACGTGAAGGCTACCTTTGCGCCAGCAACGGCCCGTAGGgcaagc                                                                                                                                                                                                                                 >  1:638929/1‑299 (MQ=255)                                                                    gaGTCATCCTGCACGACCCACCACTAATGACGGTGGGTCCGGTGGAAGTAGTTTGTAGTATCCAGCGCCGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCAACCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGAACCACCAGTTTTAAAGTC‑ACACCGAGATGTTAAGCGTGAAGGGTACAGTTGCGCCAGCAACGGCCAAGAGGgcgagc                                                                                                                                                                                                                                 >  2:497377/1‑299 (MQ=18)                                                                        cATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGTAGTGTCGGGTGATTAGCTCAGCTGGGAGAGCACCTACCTTACCAGTAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCCGTTGGTAGCGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGCCCCACCAGTTTTAACATC‑AAACTCAGATGTTAAGCGTAAAGGATAACGTTGCGCCGGCAACGGCCAGTAGGGTGagcgaagc                                                                                                                                                                                                                            >  2:289939/1‑300 (MQ=17)                                                                         aTCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATC‑AAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGagcgaagc                                                                                                                                                                                                                            >  1:132684/1‑299 (MQ=255)                                                                         aTCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATC‑AAACTCAGATGTTAAGCGTGAAGGATAACGTTACGCCAGCa                                                                                                                                                                                                                                                   >  1:632119/1‑276 (MQ=255)                                                                         aTCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCAACCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACccaccaatgtaaaaaag                                                                                                                                                                                                                                                                                             >  1:294258/1‑224 (MQ=255)                                                                         aTCCTGCAAGACCCACCACTAACGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGTAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACccaccaatgtaaaaaag                                                                                                                                                                                                                                                                                             <  2:294258/235‑12 (MQ=255)                                                                            cTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAAtttcaaggt                                                                                                                                                                                                                                                                                              >  2:668832/1‑225 (MQ=255)                                                                            cTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCAACCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATT‑AAACTCAGATGCTACGCGTTAAgggt                                                                                                                                                                                                                                                                  >  2:497444/1‑256 (MQ=255)                                                                             tGCACGCCCCACCACTAATGACTGTTGGTTCGGTGGAATTAAGCTGTAGGAGCCAGCGAGGTACCGGTGGATTAGTTAAGCTGGGAAAGCGCCCTCCTTAAAAGGGGGGGGGTGGTGGGTCGGGTCCGTCATCACCCACCAATCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGTTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATC‑AAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTc                                                                                                                                                                                                                       <  1:410409/300‑1 (MQ=9)                                                                                aCGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATC‑AAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATc                                                                                                                                                                                                                    >  1:292634/1‑300 (MQ=255)                                                                                   aCCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGAACCACCAGTTTTAACATC‑AAACTCAGATGCTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCAGTAGGGCGAGCGAAGCGAGTCATCCt                                                                                                                                                                                                                  >  2:663080/1‑299 (MQ=255)                                                                                   aCCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTACATTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCAACCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATC‑AAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCAAGCGAAGCGAGTCATCCt                                                                                                                                                                                                                  >  2:318263/1‑299 (MQ=255)                                                                                   aCCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGATGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTACTCAATTGGTCGCAGGTTCGAATCCTGCACGACCCAACAGTTTTAACATA‑AAACTCAGATGTTAAGCGTAAAGGATAACGTTGCGACAGCAAAGGACCGTAGGGTGAGAGGAGAGAGTCAtgcc                                                                                                                                                                                                                  >  2:130828/1‑296 (MQ=17)                                                                                       aacacTAATCACGGTTGATTCGGGAGAAGTGGGTTGTAATATCCAGCTCAGTATCGGGTGATTAACTCAGCTGGGAGAGCACCCCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATC‑AAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCAc                                                                                                                                                                                                              <  1:284324/297‑1 (MQ=14)                                                                                                                       gttGTAGTATCCAGCTTAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATC‑AAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGagcgaagcg                                                                                                                                                                                                                           <  2:405903/253‑1 (MQ=255)                                                                                                                       gttGTAGTATCCAGCGTAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATC‑AAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGagcgaagcg                                                                                                                                                                                                                           >  1:405903/2‑254 (MQ=255)                                                                                                                          gtagtaTCCAGCGTAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATC‑AAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGagcgaagcg                                                                                                                                                                                                                           <  2:405453/251‑1 (MQ=255)                                                                                                                                    gcgcAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATC‑AACATCAGATGCTAAGCGTGAAGGATAAAGTTGCGCCGGCACAGGCCAGTAGGGCGAGCGAAGCGAGGCATCCTTTCCGAACCACCAATCTTAAAGATTGGCAAAGAGTA‑AAAATCTTTCAGGt                                                                                                                                                               >  2:363817/1‑300 (MQ=17)                                                                                                                                    gcgcAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATC‑AAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGAACCACCAATCTTAAAGATTGGCCACGCGTA‑AAAATCTTTCAGGt                                                                                                                                                               >  1:656229/1‑300 (MQ=255)                                                                                                                                    gcgcAGTATCGGGTGATTAGCTCAGCTGGAAGAGCACCTACCTTACAAGGAGGGGGTCGGCGGTTCGATCCAGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGTATGACCCACCAGNTTTAACATC‑AAACTCAGATGTTCAGCGTGAAGGATAACGTTGCGACAACCACAGCACGTAGGGAGAGAGAGGCAGGTCATACTACACAAACCACCAATCTTAAAGacgggcaaagaggaaaaatattcga                                                                                                                                                                   >  2:236526/1‑273 (MQ=14)                                                                                                                                         gtagagggTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGTTCGGCGGTTCGATCCCTTCATCACCCACCAC‑CGGTTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATC‑AAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCAGCCTGCACGAc                                                                                                                                                                                                           <  1:447530/246‑1 (MQ=11)                                                                                                                                           aTCGGGTGATTAGCTCAGCTGGGAGAGCACCTACATTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCAACCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCAACAGTTTTAACATC‑AAACTCAGATGTTACGCGTGGAGGATAACGTTGCGCCAGCAACGGCACATAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTCAAGATTGACCCCAAGTC‑AACATCTTTCAGGTAACcccc                                                                                                                                                        >  2:164784/1‑300 (MQ=14)                                                                                                                                                aggATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATC‑AAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCAc                                                                                                                                                                                                              <  1:433416/240‑1 (MQ=255)                                                                                                                                                  gATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTGGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCAACTCCTGCCCGACCCACCAGTTTTAAAATA‑AAAATCAGATGTTAAGCGTGAAGGATACCGTTACGCCATCAAAGGCCCGCAGGGCGAGCGAAGCGAGTCATCCTGcca                                                                                                                                                                                                              >  2:433416/1‑238 (MQ=14)                                                                                                                                                  gATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATC‑AAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAg                                                                                                                                                                                            <  1:631451/258‑1 (MQ=255)                                                                                                                                                            gCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATC‑AAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTA‑AAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTc                                                                                                                                       >  1:114459/1‑300 (MQ=255)                                                                                                                                                            gCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAC‑CGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATC‑AAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTA‑AAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCa                                                                                                                                      >  2:148965/1‑300 (MQ=255)                                                                                                                                                                ggAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATC‑AAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCACGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCAAGTA‑AAAATCTTTCAGGTAACACCCGTCTGGGTCGTTAGCTCAGtt                                                                                                                                   >  1:419371/1‑300 (MQ=255)                                                                                                                                                                 tagagCACCTCCCTTACCAGTAGGCTATCTTCGGTTCGATCCCTGCAGCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATTAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATC‑AAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTA‑AAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTg                                                                                                                                  <  2:41987/299‑1 (MQ=18)                                                                                                                                                                 gagggCACCTCCCTTACAAGTAGGTGGTCGGCGGTTCGATCCCTTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGTTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATC‑AAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTA‑AAAATCTTTCAGTTAACACCCGTATGGGTCGTTAGCTCAGTTg                                                                                                                                  <  2:366323/296‑1 (MQ=255)                                                                                                                                                                 gagaGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATC‑AAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTA‑AAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGtt                                                                                                                                   >  1:39125/1‑299 (MQ=255)                                                                                                                                                                        ccTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATC‑AACCTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTA‑AAAATCTTTAAGGTAACAACCGTATGGGTCGTTAGCTCAGTGGGTAGAGc                                                                                                                           >  1:77554/1‑300 (MQ=255)                                                                                                                                                                           cccTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATC‑ACACTCAGATGTTACGCGTGAAGGATAACGTTGCGCCAGCAACGGCACGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCACGAGTA‑AAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGt                                                                                                                        >  2:644962/1‑300 (MQ=255)                                                                                                                                                                           cccTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATC‑AAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCAAGAGTA‑AAAATATTTCAGGTAACAACCGTATGGGTAGTTAGCTCAGTTGGTagagta                                                                                                                          >  2:336152/1‑296 (MQ=255)                                                                                                                                                                           cccTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAC‑CGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCGCCAGTTTTAACATC‑AAAACCAGATGTTAAGCGTGCAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTcct                                                                                                                                                                                                                     >  2:410409/1‑205 (MQ=11)                                                                                                                                                                            ccTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAC‑CGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAAC‑CAGATGTTAAGCGTGAAGGATAACGCTGCATCAGCAACGGCCCGTAGGGAGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCACGAGTA‑AAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGtt                                                                                                                       >  2:427216/1‑299 (MQ=17)                                                                                                                                                                                                               atcaCCCACCAC‑CGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATC‑AAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTA‑AAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTg                                                                                                                                  <  2:696394/253‑1 (MQ=255)                                                                                                                                                                                                                tcaCCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATC‑AAACTCAGATGTTACGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCACGAGTA‑AAAATCTTTCAGGTAAAACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGc                                                                                   >  1:129399/1‑300 (MQ=255)                                                                                                                                                                                                                gcaacgaaaaagtgggTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATC‑AAACTCAGATGTTAAGCGTGAAGGATAACGt                                                                                                                                                                                                                                                             <  2:473556/118‑1 (MQ=255)                                                                                                                                                                                                                gcaacgaaaaagtgggTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATC‑AAACTCAGATGTTAAGCGTGAAGGATAACGt                                                                                                                                                                                                                                                             >  1:473556/14‑131 (MQ=255)                                                                                                                                                                                                                  acccaccACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATC‑AAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTA‑AAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACttt                                                                                                                 <  1:482351/268‑1 (MQ=255)                                                                                                                                                                                                                      accacTCGGGGCGGTAGCTCGGTTGTTAGAGCAGTTGACTTGTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATC‑AAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTA‑AAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGAc                                                                              <  1:644962/299‑1 (MQ=255)                                                                                                                                                                                                                       ccacTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATC‑AAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTA‑AAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGAccc                                                                            >  1:414614/1‑300 (MQ=255)                                                                                                                                                                                                                             gggTCGTTAGCTCAGTTGTTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTTGAATCCTGCACGACCCACCAGTTTTAACATC‑AAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGccc                                                                                                                                                                                                                                            <  2:689681/135‑1 (MQ=255)                                                                                                                                                                                                                                               gTAGAGCAGTTTACTTTTAATCAATTGTTCGTATGTTCGAATCCTGCACGACCCACCAGTTTTAACATC‑AAACTCAGATGTTAAGCGTTAAGGATAACGTTGCGCCAGCAGCGGCCCGTATGGCGAGCGAAGCGATTCATCCTGCAAGGATAACCAATTTTAAAGGGTGGCATCG‑GTGGAGAACCCTTTAGGTAACACCCGGATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGAc                                                                              <  1:645619/274‑1 (MQ=18)                                                                                                                                                                                                                                                    gCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCAACAGTTTTAACATC‑AAACTCAGATGTCAAGCGTGAAGGATAACGTTGCGCCAGCAACGACCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTC‑AGAATCttta                                                                                                                                                                   >  2:369015/1‑183 (MQ=18)                                                                                                                                                                                                                                                             ttttAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATC‑AAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTA‑AAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAgg                                      <  2:39125/300‑1 (MQ=255)                                                                                                                                                                                                                                                               ttagtCAATTGATCGCAGGTTCGAATCCTGCACGACCCACCAGCTTTAACATC‑AAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACTGCCCGTATTGCGAGCTAAGCGAGTCAGCCCGCACGAACCACCAATCGTAAAGAGGGGCTCCGAGGG‑AAAATCCTGCAGGTAACCCCCGTATTGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGAt                                    <  2:315538/296‑1 (MQ=37)                                                                                                                                                                                                                                                                     aaTTGTTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATC‑GAACGCAGATGTTAAGCGTGAAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTA‑AAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGt                               <  1:427216/299‑1 (MQ=255)                                                                                                                                                                                                                                                                                          cTGCACGACCCACCAGTTTTAACATC‑AAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTA‑AAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGaa           >  1:194925/1‑298 (MQ=255)                                                                                                                                                                                                                                                                                          cTGCACGACCCACCAGTTTCAACATC‑AAACTCAAACGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCACGCAGGGCGAGCGAAGCGAGTCATCCTGCACGAACAACCAATCTTAAAGATTGGCCCAGAGTA‑AAAATTTTTCAGGTAACACCCGTATGTGTCGTCCACCCAGTTGACAGAGCAGTTGACTTTCAACCAATCGGTCGCAGATCCGAATCCTGCACGACCCAACAATTTCAAGGCGGTTACTGGTAGAGAACGTGAAGAATAAcaccacaccagcaacaaccaaaca          >  2:185806/1‑276 (MQ=255)                                                                                                                                                                                                                                                                                                 aCCCACCAGTTTTAACATC‑AAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTA‑AAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGAc  >  2:238328/1‑300 (MQ=255)                                                                                                                                                                                                                                                                                                 aCCCACCAGTTTTAACATC‑AAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTA‑AAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGAACCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCAGAAGGGCgagaa  >  2:267025/1‑299 (MQ=255)                                                                                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                                                                                       ATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATC‑AAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTA‑AAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGAC  >  NC_000913/780927‑781514

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.