| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,477,265 | 0 | A | C | 35.3% | 86.8 / 21.9 | 68 | L122* (TTA→TGA) | dsdC | DNA‑binding transcriptional dual regulator DsdC |
| Reads supporting (aligned to +/- strand): ref base A (11/33); new base C (24/0); total (35/33) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.03e-10 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
GCGCCCAACTATGCCATTCATCCGTACCGGAGTCGTTGCTCCATGCCTGTCTGTCATGGAGCAACGTACAGTGACACAGGTTAATTACCGTGTTGGTTAAAGCATGTCTTTGAGCGTATTCCGGGCTACATACTGGCAGGATTTCTTCATCCATCAGAAAGTGATGAGTGAGTTGCGCTGACGGCGCATCATCAAAGTAGATCGCCAAATCGATTCCGGCACGTTGCAGATTGACGTTGTCATTACCAGTGAGCACGGTGAGCGAAATAGACGGATACCGGCGTGTAAAGTCACCTAATGCGGGCACCAA‑CCAGCA‑TTGGGCGATAGAGGGCCGGGAATACAGAGTTAACGTTCCCGATAACTCCTGATTTTTGATATCAAGAATTTCCTGGTTCAGGGTATCCAGCGACGATTTTAGCGCCCAATAAACACGTTTCCCCTCGTGCGTTAATTCCACTTTGCGATGGGAACGAACAAACAACTGAATGCCCAATTCTTCTTCCAGCTGATTGATACGGTGACTTACCGCACTGGGGCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCAGCCACTTCA > NC_000913/2476969‑2477561 | gcgcCCAACTATGCCATTCATCCGTACCGGAGTCGTTGCTCCATGCCTGTCTGTCATGGAGCAACGTACAGTGACACAGGTTAATTACCGTGTTGGTTAAAGCATGTCTTTGAGCGTATTCCGGGCTACATACTGGCAGGATTTCTTCATCCATCAGAAAGTGATGAGTGAGTTGCGCTGACGGCGCATCATCAAAGTAGATCGCCAAATCGATTCCGGCACGTTGCAGATTGACGTTGTCATTACCAGTGAGCACGGTGAGCGAAATAGACGGATACCGGCGTGTAAAGTCACCTAATg < 1:372669/300‑1 (MQ=255)gcacccAGCTATGCCATTCATCCGTACCGGAGTCGTTGCTCCATGCCTGTCTGTCATGGAGCAACGTGCAGTGACACAGGTTAACTACCGTGTTGGTTAAAGCATGTCTTTGAGCGTATTCCGGGCTACATACTGGCAGGATTTCTTCATCCATCAGAAAGTGATGAGTGAGTTGCGCTGACGGCGCATCATCAAAGTAGATCGCCAAATCGATTCCGGCACGTTGCAGATTGACGTTGTCATTACCAGTGAGCACGGTGAGCGAAATAGACGGATACCGGCGTGTAAAGTCACCTAATg < 2:101855/297‑1 (MQ=255) cAACTATGCCATTCATCCGTACCGGAGTCGTTGCTCCATGCCTGTCTGTCATGGAGCAACGTACAGTGACACAGGTTAATTACCGTGTTGGTTAAAGCATGTCTTTGAGCGTATTCCGGGCTACATACTGGCAGGATTTCTTCATCCATCAGAAAGTGATGAGTGAGTTGCGCTGACGGCGCATCATCAAAGTAGATCGCCAAATCGATTCCGGCACGTTGCAGATTGACGTTGTCATTACCAGTGAGCACGGTGAGCGAAATAGACGGATACCGGCGTGGAAAATCCCCCCATGCGGGc > 1:588518/1‑300 (MQ=255) aCTATGCCATTCATCCGTACCGGAGTCGTTGCTCCATGCCTGTCTGTCATGGAGCAACGTACAGTGACACAGGTTAATTACCGTGTTGGTTAAAGCATGTCTTTGAGCGTATTCCGGGCTACATACTGGCAGGATTTCTTCATCCATCAGAAAGTGATGAGTGAGTTGCGCTGACGGCGCATCATCAAAGTAGATCGCCAAATCGATTCCGGCACGTTGCAGATTGACGTTGTCATTACCAGTGAGCACGGTGAGCGAAATAGACGGATACCGGCGTGTAAAGTCACCTAATGCGGGCac < 1:274104/300‑1 (MQ=255) cTATGCCATTCATCCGTACCGGAGTCGTTGCTCCATGCCTGTCTGTCATGGAGCAACGTACAGTGACACAGGTTAATTACCGTGTTGGTTAAAGCATGTCTTTGAGCGTATTCCGGGCTACATACTGGCAGGATTTCTTCATCCATCAGAAAGTGATGAGTGAGTTGCGCTGACGGCGCATCATCAAAGTAGATCGCCAAATCGATTCCGGCACGTTGCAGATTGACGTTGTCATTACCAGTGAGCACGGTGAGCGAAATAGACGGATACCGGCGTGTAAAATCACCCCATGCGGGAacc > 1:179102/1‑300 (MQ=255) ccATTCATCCGTACCGGAGTCGTTGCTCCATGCCTGTCTGTCATGGAGCAACGTACAGTGACACAGGTTAATTACCGTGTTGGTTAAAGCATGTCTTTGAGCGTATTCCGGGCTACATACTGGCAGGATTTCTTCATCCATCAGAAAGTGATGAGTGAGTTGCGCTGACGGCGCATCATCAAAGTAGATCGCCAAATCGATTCCGGCACGTTGCAGATTGACGTTGTCATTACCAGTGAGCACGGTGAGCGAAATAGACGGATACCGGCGTGTAAAATCAACCAACGCGGGAaccaa‑cca > 1:113017/1‑300 (MQ=255) tCATCCGTACCGGAGTCGTTGCTCCATGCCTGTCTGTCATGGAGCAACGTACAGTGACACAGGTTAATTACCGTGTTGGTTAAAGCATGTCTTTGAGCGTATTCCGGGCTACATACTGGCAGGATTTCTTCATCCATCAGAAAGTGATGAGTGAGTTGCGCTGACGGCGCATCATCAAAGTAGATCGCCAAATCGATTCCGGCACGTTGCAGATTGACGTTGTCATTACCAGTGAGCACGGTGAGCGAAATAGACGGATACCGGCGTGTAAAGTCACCTAATGCGGGCACCAA‑CCAGCA‑t < 1:385937/300‑1 (MQ=255) tCATCCGTACCGGAGTCGTGGCTCCATGCCTGTCTGTCATGGAGCAACGTACAGTGACACAGGTTAATTACCGTGTTGGTTAAAGCATGTCTTTGAGCGTATTCCGGGCTACATACTTGCAGGATTTCTTCATCCATCAGAAAGTGATGAGTGAGTTGCGCTGACGGCGCATCATCAAAGTAGATCGCCAAATCGATTCCGGCACGTTGCAGATTGACGTTGTCATTACCAGTGAGCACGGTGAGCGAAATAGACGGATACCGGCGTGTAAAGTCACCTAATGCGGGCACCAA‑CCAGCA‑t < 2:105238/300‑1 (MQ=255) tCATCCGTACCGGAGTCGTGGCTCCATGCCTGTCTGTCATGGAGCAACATACAGTGACACAGGTTAATTACCGTGTTGGTTAAAGCATGTCTTTGAGCGTATTCCGGGCTACATACTTGCAGGATTTCTTCATCCATCAGAAAGTGATGAGTGAGTTGCGCTGACGGCGCATCATCAAAGTAGATCGCCAAATCGATTCCGGCACGTTGCAGATTGACGTTGTCATTACCAGTGAGCACGGTGAGCGAAATAGACGGATACCGGCGTGTAAAGTCACCTAATGCGGGCACCAA‑CCAGCA‑t < 2:350417/300‑1 (MQ=255) cATCCGTACCGGAGTCGTTGCTCCATGCCTGTCTGTCATGGAGCAACGTACAGTGACACAGGTTAATTACCGTGTTGGTTAAAGCATGTCTTTGAACGTATTCCGGGCTACATACTGGCAGGATTTCTTAATCCATCAGAAAGTGATGAGTGAGTTGTGCTGACGGCGCATCATCAAAGTAGATCGCCAAATCGATTCCGGCACGTTGCAGATTGACGTTGTCATTACCGGTGAGCACGGTGAGCGAAATAGACGGATACCGGCGTGTAAACTCACCTCACGCgggaaaccaacaatagt > 2:396236/1‑286 (MQ=255) gTACCGGAGTCGTTGCTCCATGCCTGTCTGTCATGGAGCAACGTACAGTGACACAGGTTAATTACCGTGTTGGTTAAAGCATGTCTTTGAGCGTATTCCGGGCTACATACTGGCAGGATTTCTTCATCCATCAGAAAGTGATGAGTGAGTTGCGCTGACGGCGCATCATCAAAGTAGATCGCCAAATCGATTCCGGCACGTTGCAGATTGACGTTGTCATTACCAGTGAGCACGGTGAGCGAAATAGACGGATACCGGCGTGTAAAGTCACCTAATGCGGGCACCAA‑CCAGCA‑TTGGGc < 2:665952/299‑1 (MQ=255) tCGTTGCTCCATGCCTGTCTGTCATGGAGCAACGTACAGTGACACAGGTTAATTACCGTGTTGGTTAAAGCATGTCTTTGAGCGTATTCCGGGCTACATACTGGCAGGATTTCTTCATCCATCAGAAAGTGATGAGTGAGTTGCGCTGACGGCGCATCATCAAAGTAGATCGCCAAATCGATTCCGGCACGTTGCAGATTGACGTTGTCATTACCAGTGAGCACGGTGAGCGAAATAGACGGATACCGGCGTGTAAAGTCACCTAATGCGGGCACCAA‑CCAGCA‑TTGGGCGATAGAGGGc < 1:421929/300‑1 (MQ=255) gTTGCTCCATGCCTGTCTGTCATGGAGCAACGTACAGTGACACAGGTTAATTACCGTGTTGGTTAAAGCATGTCTTTGAGCGTATTCCGGGCTACATACTGGCAGGATTTCTTCATCCATCAGAAAGTGATGAGTGAGTTGCGCTGACGGCGCATCATCAAAGTAGATCGCCAAATCGATTCCGGCACGTTGCAGATTGACGTTGTCATTACCAGTGAGCACGGTGAGCGAAATAGACGGATACCGGCGTGTAAAGTCACCTAATGCGGGCaccaa‑cctgtctcttatacacatctcgc < 1:233354/299‑22 (MQ=255) gCTCCATGCCTGTCTGTCATGGAGCAACGTACAGTGACACAGGTTAATTACCGTGTTGGTTAAAGCATGTCTTTGAGCGTATTCCGGGCTACATACTGGCAGGATTTCTTCATCCATCAGAAAGTGATGAGTGAGTTGCGCTGACGGCGCATCATCAAAGTAGATCGCCAAATCGATTCCGGCACGTTGCAGATTGACGTTGTCATTACCAGTGAGCACGGTGAGCGAAATAGACGGATACCGGCGTGTAAAGTCACCTAACGCGGGaaccaa‑cccacact > 1:649705/1‑275 (MQ=255) aTGCCTGTCTGTCATGGAGCAACGTACAGTGACACAGGTTAATTACCGTGTTGGTTAAAGCATGTCTTTGAGCGTATTCCGGGCTACATACTGGCAGGATTTCTTCATCCATCAGAAAGTGATGAGTGAGTTGCGCTGACGGCGCATCATCAAAGTAGATCGCCAAATCGATTCCGGCACGTTGCAGATTGACGTTGTCATTACCAGTGAGCACGGTGAGCGAAATAGACGGATACCGGCGTGTAAAGTCCCCCCATGCGGGCACCCA‑CCCGCA‑TTTGGTGGTAGAgggacaggaaccca > 1:405157/1‑289 (MQ=255) tGCCTGTCTGTCATGGAGCAACGTACAGTGACACAGGTTAATTACCGTGTTGGTTAAAGCATGTCTTTGAGCGTATTCCGGGCTACATACTGGCAGGATTTCTTCATCCATCAGAAAGTGATGAGTGAGTTGCGCTGACGGCGCATCATCAAAGTAGATCGCCAAATCGATTCCGGCACGTTGCAGATTGACGTTGTCATTACCAGTGAGCACGGTGAGCGAAATAGACGGATACCGGCGTGTAAAGTCACCTAATGCGGGCACCAA‑CCAGCA‑TTGGGCGATAGAGGGCCGGGAATACag < 1:372954/300‑1 (MQ=255) tgtctgtcATGGAGCAACGTACAGTGACACAGGTTAATTACCGTGTTGGTTAAAGCATGTCTTTGAGCGTATTCCGGGCTACATACTGGCAGGATTTCTTCATCCATCAGAAAGTGATGAGTGAGTTGCGCTGACGGCGCATCATCAAAGTAGATCGCCAAATCGATTCCGGCACGTTGCAGATTGACGTTGTCATTACCAGTGAGCACGGTGAGCGAAATAGACGGATACCGGCGTGTAAAGTCACCTAATGCGGGCACCAA‑CCAGCA‑TTGGGCGATAGAGGGCCGGGAATACAGAGt < 2:588518/299‑1 (MQ=255) gtcATGGAGCAACGTACAGTGACACAGGTTAATTACCGTGTTGGTTAAAGCATGTCTTTGAGCGTATTCCGGGCTACATACTGGCAGGATTTCTTCATCCATCAGAAAGTGATGAGTGAGTTGCGCTGACGGCGCATCATCAAAGTAGATCGCCAAATCGATTCCGGCACGTTGCAGATTGACGTTGTCATTAACAGTGAGCACGGTGAGCGAAATAGACGGATACCGGCGTGTCAAGTCACACAACGTGGGCACCAA‑CCAGCACTTGGG‑GATAGAGGGACGGGAAcacaaagctcacct > 2:335653/1‑290 (MQ=255) aaCGTACATTGACACAGGTTAATTACCGTGTTGGTTAAAGCATGTCTTTGAGCGTATTCCGGGCTACATACTGGCAGGATTTCTTCATCCATCAGAAAGTGATGAGTGAGTTGCGCTGACGGCGCATCATCAAAGTAGATCGCCAAATCGATTCCGGCACGTTGCAGATTGACGTTGTCATTACCAGTGAGCACGGTGAGCGAAATAGACGGATACCGGCGTGTAAAGTCACCTAATGCGGGCACCAA‑CCAGCA‑TTGGGCGATAGAGGGCCGGGAATACAGAGTTAACGTTCCCGATAAc < 2:411064/300‑1 (MQ=255) aaCGTACAGTGACACAGGTTAATTACCGTGTTGGTTAAAGCATGTCTTTGAGCGTATTCCGGGCTACATACTGGCAGGATTTCTTCATCCATCAGAAAGTGATGAGTGAGTTGCGCTGACGGCGCATCATCAAAGTAGATCGCCAAATCGATTCCGGCACGTTGCAGATTGACGTTGTCATTACCAGTGAGCACGGTGAGCGAAATAGACGGATACCGGCGTGTAAAGTCCCCTCACGCGGGAACCAA‑CCAACA‑TTGGGAGATAGAGGGACAGGAACACAGAGTTCACGTTCCCGAtcac > 1:207557/1‑297 (MQ=255) aCGTACAGTGACACAGGTTAATTACCGTGTTGGTTAAAGCATGTCTTTGAGCGTATTCCGGGCTACATACTGGCAGGATTTCTTCATCCATCAGAAAGTGATGAGTGAGTTGCGCTGACGGCGCATCATCAAAGTAGATCGCCAAATCGATTCCGGCACGTTGCAGATTGACGTTGTCATTACCAGTGAGCACGGTGAGCGAAATAGACGGATACCGGCGTGTAAAGTCACCTCATGCGGGCACCAA‑CCAACA‑TTGGGTGATAGAGGGAAGGGAAGACAGAGTTAACGTTCCCGATaa > 1:418846/1‑298 (MQ=255) ggTTAATTACCGTGTTGGTTAAAGCATGTCTTTGAGCGTATTCCGGGCTACATACTGGCAGGATTTCTTCATCCATCAGAAAGTGATGAGTGAGTTGCGCTGACGGCGCATCATCAAAGTAGATCGCCAAATCGATTCCGGCACGTTGCAGATTGACGTTGTCATTACCAGTGAGCACGGTGAGCGAAATAGACGGATACCGGCGTGTAAAGTCACCTCACGCGGGCACCAA‑CCCACA‑TTGGGGGATAGAGGGGCGGGAACACAGAGTTAACGTTCCCAATAACCCCCGATTTTTTatat > 1:669343/1‑300 (MQ=255) tAATTACCGTGTTGGTTAAAGCATGTCTTTGAGCGTATTCCGGGCTACATACTGGCAGGATTTCTTCATCCATCAGAAAGTGATGAGTGAGTTGCGCTGACGGCGCATCATCAAAGTAGATCGCCAAATCGATTCCGGCACGTTGCAGATTGACGTTGTCATTACCAGTGAGCACGGTGAGCGAAATAGACGGATACCGGCGTGTAAAGTCCCCCCATGCGGGCACCCA‑CCAACC‑TTGGGAGAAAGAGGGCCGGGAATACCGAGGTCACGTTCCCGATAACCCCTTCTTTTTggcattca > 2:246023/1‑293 (MQ=255) tAATTACCGTGTTGGTTAAAGCATGTCTTTGAGCGTATTCCGGGCTACATACTGGCAGGATTTCTTCATCCATCAGAAAGTGATGAGTGAGTTGCGCTGACGGCGCATCATCAAAGTAGATCGCCAAATCGATTCCGGCACGTTGCAGATTGACGTTGTCATTACCAGTGAGCACGGTGAGCGAAATAGACGGATACCGGCGTGTAAAGTCACCTAACGCGGGCACCAAACCA‑CA‑TTGGGGGATAGAGGGCCGGGAATCCCAAGTTCACGTTCCCGATAACTCATGCttttttatcccca > 2:457178/1‑292 (MQ=255) ggTTAAAGCATGTCTTTGAGCGTATTCCGGGCTACATACTGGCAGGATTTCTTCATCCATCAGAAAGTGATGAGTGAGTTGCGCTGACGGCGCATCATCAAAGTAGATCGCCAAATCGATTCCGGCACGTTGCAGNTTGACGTTGTCATTACCAGTGAGCACGGTGAGCGAAATAGACGGATACCGGCGTGTAAAGTCACCTCATGCGGGTACCAA‑CCCGCC‑TTGGGAGGTAGAGGGAAGGGAATACAAAGTTCACGTTCCCAATAACTCCCGGTTTTTTATATCACGAATTTCCTGGtt > 2:511325/1‑300 (MQ=255) gTTAAAGCATGTCTTTGAGCGTATTCCGGGCTACATACTGGCAGGATTTCTTCATCCATCAGAAAGTGATGAGTGAGTTGCGCTGACGGCGCATCATCAAAGTAGATCGCCAAATCGATTCCGGCACGTTGCAGATTGACGTTGTCATTACCAGTGAGCACGGTGAGCGAAATAGACGGATACCGGCGTGTAAAGTCACCTAATGCGGGCACCAA‑CCAGCA‑TTGGGCGATAGAGGGCCGGGAATACAGAGTTAACGTTCCCGATAACTCCTGATTTTTGATATCAAGAATTTCCTGGTTc < 2:688434/300‑1 (MQ=255) aaGCATGTCTTTGAGCGTATTCCGGGCTACATACTGGCAGGATTTCTTCATCCATCAGAAAGTGATGAGTGAGTTGCGCTGACGGCGCATCATCAAAGTAGATCGCCAAATCGATTCCGGCACGTTGCAGATTGACGTTGTCATTACCAGTGAGCACGGTGAGCGAAATAGACGGATACCGGCGTGTAAAGTCACCTCATGCGGGCaccaaaacgcatt > 2:442245/1‑211 (MQ=255) aaGCATGTCTTTGAGCGTATTCCGGGCTACATACTGGCAGGATTTCTTCATCCATCAGAAAGTGATGAGTGAGTTGCGCTGACGGCGCATCATCAAAGTAGATCGCCAAATCGATTCCGGCACGTTGCAGATTGACGTTGTCATTACCAGTGAGCACGGTGAGCGAAATAGACGGATACCGGCGTGTAAAGTCACCCCACGCGGGGACCAA‑CCCGCA‑TTTGGAGATAGAGGGCCGGGGATACAAAATTAACATTCCCGATAACTCCTTAttttttccctccaaaacttcctgggttc > 2:46590/1‑274 (MQ=255) aGCATGTCTTTGAGCGTATTCCGGGCTACATACTGGCAGGATTTCTTCATCCATCAGAAAGTGATGAGTGAGTTGCGCTGACGGCGCATCATCAAAGTAGATCGCCAAATCGATTCCGGCACGTTGCAGATTGACGTTGTCATTACCAGTGAGCACGGTGAGCGAAATAGACGGATACCGGCGTGTAAAGTCACCTAATGCGGGCACCAA‑CCAGCA‑TTGGGCGATAGAGGGCCGGGAATACAGAGTTAACGTTCCCGATAACTCCTGATTTTTGATATCAAGAATTTCCTGGTTCAGGGt < 1:203084/300‑1 (MQ=255) gCATGTCTCTGAGCATATTCCGGGCTACATACTGGCAGGATTTCTTCATCCATCAGAAAGTGATGAGTGAGTTGCGCTGACGGCGCATCATCAAAGTAGATCGCCAAATCGATTCCGGCACGTTGCAGATTGACGTTGTCATTACCAGTGAGCACGGTGAGCGAAATAGACGGATACCGGCGTGTAAAATCACCCCATGCGGGCCCCAA‑CCAGCC‑CTGGGCGATCGAGGGCAAAGAATACAAAGTTACCACTCCCCATCACTCCTGAttttttatcccaaaaatctcctgggtcaaggt > 2:601915/1‑272 (MQ=255) aTGTCTTTGAGCGTATTCCTGGCTACATACTGGCAGGATTTCTTCATCCATCAGAAAGTGATGAGTGAGTTGCGCTGACGGCGCATCATCAAAGTAGATCGCCAAATCGATTCCGGCACGTTGCAGATTGACGTTGTCATTACCAGTGAGCACGGTGAGCGAAATAGACGGATACCGGCGTGTAAAGTCACCTAATGCGGGCACCAA‑CCAGCA‑TTGGGCGATAGAGGGCCGGGAATACAGAGTTAACGTTCCCGATAACTCCTGATTTTTGATATCAAGAATTTCCTGGTTCAGGGTAt < 1:442245/299‑1 (MQ=255) aTGTCTTTGAGCGTATTCCGGGCTACATACTGGCAGGATTTCTTCATCCATCAGAAAGTGATGAGTGAGTTGCGCTGACGGCGCATCATCAAAGTAGATCGCCAAATCGATTCCGGCACGTTGCAGATTGACGTTGTCATTACCAGTGAGCACGGTGAGCGAAATAGACGGATACCGGCGTGTAAAGTCACCTAATGCGGGCACCAA‑CCAGCA‑TTGGGCGATAGAGGGCCGGGAATACAGAGTTAACGTTCCCGATAACTCCTGATTTTTGATATCAAGAATTTCCTGGTTCAGGGTAt < 1:46590/299‑1 (MQ=255) tCTTTGAGCGTATTCCGTGCTACATACTTGCAGGATTTCTTCATCCATCAGAAAGTGATGAGTGAGTTGCGCTGACGGCGCATCATCAAAGTAGATCGCCAAATCGATTCCGGCACGTTGCAGATTGACGTTGTCATTACCAGTGAGCACGGTGAGCGAAATAGACGGATACCGGCGTGTAAAGTCACCTAATGCGGGCACCAA‑CCAGCA‑TTGGGCGATAGAGTGCCGGGAATACAGAGTTAACGTTCCCGATAACTCCTGATTTTTGATATCAAGAATTTCCTGGTTCATGGTATCCAg < 2:701457/300‑1 (MQ=255) tttGAGCGTAGTCCGGGCTACATACTGGCAGGATTTCTCCATCCATCAGAAAGTGATGAGTTAGTTGCGCTGACGGCGCATCATCAAAGTAGATCGCCAAATCGATTCCGGCACGTTGCAGATTGACGTTGTCATTACCAGTGAGCACGGTGAGCGAAATAGACGGATACCGGCGTGTAAAGTCACCTAATGCGGGCACCAA‑CCAGCA‑TTGGGCGATAGAGGGCCGGGAATACAGAGTTAACGTTCCCGATAACTCCTGATTTTTGATATCAAGAATTTCCTGGTTCAGGGTATCCAGc < 2:65337/299‑1 (MQ=255) gCGTATTCCGGGCTACATACTGGCAGGATTTCTTCATCCATCAGAAAGTGATGAGTGAGTTGCGCTGACGGCGCATCATCAAAGTAGATCGCCAAATCGATTCCGGCACGTTGCAGATTGACGTTGTCATTACCAGTGATCACGGTGAGCGAAATAGACGGATACCGGCGTGTAAAATTACCTCATGTGGGCACCAA‑ACAGCA‑GTTGGTGGTGGGGGGAAGNGGATAAAGAGTTGAAGTTCACGCTAAATCCCGAGTTTTGATATCAAGAATTTACTGGTTTAGGGTATCCAgtggc > 1:133428/1‑293 (MQ=255) gCGTATTCCGGGCTACATACTGGCAGGATTTCTTCATCCATCAGAAAGTGATGAGTGAGTTGCGCTGACGGCGCATCATCAAAGTAGATCGCCAAATCGATTCCGGCACGTTGCAGATTGACGTTGTCATTACCAGTGATCACGGTGAGCGAAATAGACGGATACCGGCGTGTAAAATCACCTCACGCGGGAACCAA‑ACAGCA‑CTGGGAGATAGAGGGACGNGGATACCGAGTTAACATTCCCGATGAATCATGATTTTTTATATCCAAAATTTCCTGGTTCCGGGTATCCAGcgacaa > 1:133535/1‑297 (MQ=255) cATACTGGCAGGATTTNTTCATCCATCAGAAAGTGATGAGTGAGTTGCGCTGACGGCGCATCATCAAAGTAGATCGCCAAATCGATTCCGGCACGTTGCAGATTGACGTTGTCATTACCAGTGAGCACGGTGAGCGAAATAGACGGATACCGGCGTGTAAAATCACCCCACGCGGGCACCCA‑CCAACC‑TTTGGCGATAGAGGGACGGGAATACAGAGTTCAGATTCCCAATAACTCCTGATTTTTGATGTCCAGAATTTCCTGNTTCAGGGTATCCCGCGACNATTTTAGCGCCCaacaa > 1:615324/1‑297 (MQ=255) aGGATTTCTTCATCCATCAGAAAGTGATGAGTGAGTTGCGCTGACGGCGCATCATCAAAGTAGATCGCCAAATCGATTCCGGCACGTTGCAGATTGACGTTGTCATTACCAGTGAGCACGGTGAGCGAAATAGACGGATACCGGCGTGTAAAGTCACCTAATGCGGGCACCAA‑CCAGCA‑TTGGGCGATAGAGGGCCGGGAATACAGAGTTAACGTTCCCGATAACTCCTGATTTTTGATATCAAGAATTTCCTGGTTCAGGGTATCCAGCGACGATTTTAGCGCCCAATAAACACGTTTc < 1:701589/300‑1 (MQ=255) atccatcAGAAAGTGATGAGTGAGTTGCGCTGACGGCGCATCATCAAAGTAGATCGCCAAATCGATTCCGGCACGTTGCAGATTGACGTTGTCATTACCAGTGAGCACGGTGAGCGAAATAGACGGATACCGGCGTGTAAAGTCCCCTCATGCGGGCACCCA‑CCAGCA‑TTGGGGGATAGGGGGACGGGAATACAAAGTTAACGTTCCCAATAACCCCCGATTTTTTATATCCAGAATTTCCCGGTTCCGGGTATCCCGCGACAATTTTCGCGCCCAATAAACACGTTTCCCCCCGTgtgt > 1:585085/1‑297 (MQ=255) atccatcAGAAAGTGATGAGTGAGTTGCGCTGACGGCGCATCATCAAAGTAGATCGCCAAATCGATTCCGGCACGTTGCAGATTGACGTTGTCATTACCAGTGAGCACGGTGAGCGAAATAGACGGATACCGGCGTGGAAAGTCACCCAACGCGGGaaccaa‑ccca > 1:585081/1‑164 (MQ=255) atcAGAAAGTGATGAGTGAGTTGCGCTGACGGCGCATCATCAAAGTAGATCGCCAAATCGATTCCGGCACGTTGCAGATTGACGTTGTCATTACCAGTGAGCACGGTGAGCGAAATAGACGGATACCGGCGTGTAAAATCCCCTCACGCGGGCACCCA‑CCAACA‑TTGGGTGATAGAGGGAAGGGAATACCGAGTTCACGTTCCCAATAACCCCTGATTTTTGATATCCAAAACTTCCTGGTTCCGGGTATCCCACACCGATTTTCGCGCCCAACAAAAACGTTTCCCCTCGTGCGTTAAt > 1:540731/1‑300 (MQ=255) aGTGATGAGTGAGTTGCGCTGACGGCGCATCATCAAAGTAGATCGCCAAATCGATTCCGGCACGTTGCAGATTGACGTTGTCATTACCAGTGAGCACGGTGAGCGAAATAGACGGATACCGGCGTGTAAAGTCACCCAATGCGGGCACCAA‑CCCGCA‑TTGGGGGGGGGGGGGACGGGGATACAGAGTTAACGTTCCCGATAACTCCCGATTTTTTATATCAAGAATTTCCTTGTTCAAGGTACCCAACGACGATTTTCGCGCCCAATAAACACGTTTCCCCCCGTGCGTTAATTcccact > 1:633018/1‑296 (MQ=255) gagtTGCGCTGACGGCGCATCATCAAAGTAGATCGCCAAATCGATTCCGGCACGTTGCAGATTGACGTTGTCATTACCAGTGAGCACGGTGAGCGAAATAGACGGATACCGGCGTGTAAAGTCACCTCATGCGGGCaccaa‑cc > 1:176926/1‑143 (MQ=255) gagtTGCGCTGACGGCGCATCATCAAAGTAGATCGCCAAATCGATTCCGGCACGTTGCAGATTGACGTTGTCATTACCAGTGAGCACGGTGAGCGAAATAGACGGATACCGGCGTGGAAAATCACCTCACGCGGGCACCAA‑CCAACA‑TTGGGCGATAGAGGGACGGGAATACAAAGTTAAAGCTCCCTATAACTCCTGATTTTTGGTATCCAGGATTTCCTGGTTCAGGGTATCCAGCAAAGGTTTTAGCGCACAAGAAACACGTTTCCCCTCTTGTTTTAATTCCCCCTTGTGATGGga > 1:176932/1‑300 (MQ=255) gcATCATCAAAGTAGATCGCCAAATCGATTCCGGCACGTTGCAGATTGACGTTGTCATTACCAGTGAGCACGGTGAGCGAAATAGACGGATACCGGCGTGTAAAGTCACCTAATGCGGGCACCAA‑CCAGCA‑TTGGGCGATAGAGGGCCGGGAATACAGAGTTAACGTTCCCGATAACTCCTGATTTTTGATATCAAGAATTTCCTGGTTCAGGGTATCCAGCGACGATTTTAGCGCCCAATAAACACGTTTCCCCTCGTGCGTTAATTCCACTTTGCGATGGGAACGAACAAACAACTg < 1:166065/299‑1 (MQ=255) gCACTTTGCAGATTGACGTTGTCATTACCAGTGAGCACGGTGAGCGAAATAGACGGATACCGGCGTGTAAAGTCACCTAATGCGGGCACCAA‑CCAGCA‑TTGGGCGATAGAGGGCCGGGAATACAGAGTTAACGTTCCCGATAACTCCTGATTTTTGATATCAAGAATTTCCTGGTTCAGGGTATCCAGCGACGATTTTAGCGCCCAATAAACACGTTTCCCCTCGTGCGTTAATTCCACTTTGCGATGGGAACGAACAAACAACTGAATGCCCAATTCTTCTTCCAGCTGATTGATAc < 2:653674/298‑1 (MQ=255) tGACGTTGTCATTACCAGTGAGCACGGTGAGCGAAATAGACGGATACCGGCGTGTAAAGTCACCTAATGCGGGCACCAA‑CCAGCA‑TTGGGCGATAGAGGGCCGGGAATACAGAGTTAACGTTCCCGATAACTCCTGATTTTTGATATCAAGAATTTCCTGGTTCAGGGTATCCAGCGACGATTTTAGCGCCCAATAAACACGTTTCCCCTCGTGCGTTAATTCCACTTTGCGATGGGAACGAACAAACAACTGAATGCCCAATTCTTCTTCCAGCTGATTGATACGGTGACTTACCGCAc < 2:393100/300‑1 (MQ=255) tGTCATTACCAGTGAGCACGGTGAGCGAAATAGACGGATACCGGCGTGTAAAGTCACCTAATGCGGGCACCAA‑CCAGCA‑TTGGGCGATAGAGGGCCGGGAATACAGAGTTAACGTTCCCGATAACTCCTGATTTTTGATATCAAGAATTTCCTGGTTCAGGGTATCCAGCGACGATTTTAGCGCCCAATAAACACGTTTCCCCTCGTGCGTTAATTCCACTTTGCGATGGGAACGAACAAACAACTGAATGCCCAATTCTTCTTCCAGCTGATTGATACGGTGACTTACCGCACTGGGGc < 1:123862/300‑1 (MQ=255) gTCATTACCAGTGAGCACGGTGAGCGAAATAGACGGATACCGGCGTGTAAAGTCACCTAATGCGGGCACCAA‑CCAGCA‑TTGGGCGATAGAGGGCCGGGAATACAGAGTTAACGTTCCCCATAACTCCTGATTTTTGATATCAAGAATTTCCTGGTTCAGGGTATCCAGCGACGATTTTAGCGCCCAATAAACACGTTTCCCCTCGTGCGTTAATTCCACTTTGCGATGGGAACGAACAAACAACTGAATGCCCAATTCTTCTTCCAGCTGATTGATACGGTGACTTACCGCACTGGGGc < 2:650359/299‑1 (MQ=255) gTCATTACCAGTGAGCACGGTGAGCGAAATAGACGGATACCGGCGTGTAAAATCACCCAACGCGGGCACCAA‑CCAGCA‑CTTGGCGATAAAGGGCCAGGAAGACCAAATTAACATTCCCAATGACTCCTGATTTTTGATATCCAAAACTTCCCGGTTCCGGGTCCCCCGCAACAATTTTCGCGCCCAACAAACCCTTTTCCCCCCATGCTTTTATTCCACTTTTCGATGGGAACGAACAAAAAACTTAATGTCCAAGTCCTCTTCCCGCTGACTGATACGGttacctcccgcccttgggct > 1:336491/1‑281 (MQ=255) cATTACCAGTGAGCACGGTGAGCGAAATAGACGGATACCGGCGTGGAAAGTCCCCCCATGAGGGCACCAA‑CCAGCA‑CTGGGGGGTAGAGGGACAGGGATACAGAGTTAACGTTCCCGATAACTCCTGATTTTTTATATCAAGAATTTCCTGGTTCAGGGTATCCCGCGACGATTTTAGCGCCCCACAAACCCGTTTCCCCCCGTGCGTTCATTCCCCCTTTCGATGGGAACGAACAAACAACCGAAGGTACAACTCTTCTTCCAGCTGGTTGATACGGTGGCCTCCCGCACTGGGGTTCa > 2:499377/1‑300 (MQ=255) aGTGAGCACGGTGAGCGAAATAGACGGATACCGGCGTGTAAAATCACCTCATGCGGGCACCAA‑CCAGCC‑TTGGGCGATAGAGGGCCAGGAATACAAAGTTAACGTTCCCAATAACTCCTGGTTTTTGATATCAAGAATTTCCTGGTTCCAGGTATCCAACGACGATTTTCGCGCCCAACAAACACGTTTCCCCTCTTGCGTTCATTCCCCTTTGCGATGGGGACGAACAAACAACCGAATGCACAAGTCTTCTTCCAGCTGGGTGATAAGGTGACCTCCCGCACCggggatacgcgacaa > 1:94561/1‑289 (MQ=255) gAGCACGGTGAGCGAAATAGACGGATACCGGCGTGTAAAATCCCCCCACGCGGGAACCAA‑CCAACC‑CTGGGCGATAGGGGGACGGGAATACAGAGTTGACATTCCCGATAACTCCTTGTTTTTTATATCAAAAACTTCCTTGTTCCGGGTATCCCACTGCAATTTTCGCGCCCAACCAACACGTTTCCCCCCGTGTGTTCATTCCCCTTTTCGATGGGAACGAAAAAACCACCAAATGCCCCATTCTTCCTCCAGCCGATTGACGCGGTGACTTCCCTCACTTGGGATCAGCGACacctc > 2:703926/1‑296 (MQ=255) gAGCACGGTGAGCGAAATAGACGGATACCGGCGTGTAAAATCACCCCATGCGGGaaccaa‑cc > 2:553702/1‑62 (MQ=255) cGGTGAGCGAAATAGACGGATACCGGCGTGTAAAGTCACCTCACGCGGGCACCCA‑CCCACC‑TTTGGCGATAGAGGGCCGGGAATACAGAGTTCACGTTCCCGATAACTCCCGAttttt > 1:346318/1‑118 (MQ=255) gCGAAATAGACGGATACCGGCGTGTAAAGTCACCTAATGCGGGCACCAA‑CCAGCA‑TTGGGCGATAGAGGGCCGGGAATACAGAGTTAACGTTCCCGATAACTCCTGATTTTTGATATCAAGAATTTCCTGGTTCAGGGTATCCAGCGACGATTTTAGCGCCCAATAAACACGTTTCCCCTCGTGCGTTAATTCCACTTTGCGATGGGAACGAACAAACAACTGAATGCCCAATTCTTCTTCCAGCTGATTGATACGGTGACTTACCGCACTGGGGCTCAGCGACAATTCCTCTGccacca < 1:246023/300‑1 (MQ=255) gAAATAGACGGATACCGGCGTGTAAAGTCACCTAATGCGGGCACCAA‑CCAGCA‑TTGGGCGATAGAGGGCCGGGAATACAGAGTTAACGTTCCCGATAACTCCTGATTTTTGATATCAAGAATTTCCTGGTTCAGGGTATCCAGCGACGATTTTAGCGCCCAATAAACACGTTTCCCCTCGTGCGTTAATTCCACTTTGCGATGGGAACGAACAAACAACTGAATGCCCAATTCTTCTTCCAGCTGATTGATACGGTGACTTACCGCACTGGGGCTCAGCGACAATTCCTCTGCCGCCa < 1:245348/298‑1 (MQ=255) aaaTAGACGGATACCGGCGTGTAAAGTCGCCCAATGCAGGCACCAA‑ACAGCA‑CTGGGTGGTAGAGGGACGGGAGTACAGAGTTAACGTTTCCGATAACTCCCGATTTTTGAGATCAAAAACTTCCCGGTTTAGGGTCTCCAACGAAGATTTTAGCGCCCCATCAACACATTTCCCCTCTTGCGTTCACTCCACTTTTCGACGGGAACGAACAAACAACTGAGTGTCCAACTCTTCTTCCAGCTGATTGATACGGTGACTTACCGCACTGGGGCTCAGAAACAATTCCTCTGCCGCCa > 2:14437/1‑297 (MQ=255) aaTAGACGGATACCGGCGTGTAAAGTCACCTAATGCGGGCACCAA‑CCAGCA‑TTGGGCGATAGAGGGCCGGGAATACAGAGTTAACGTTCCCGATAACTCCTGATTTTTGATATCAAGAATTTCCTGGTTCAGGGTATCCAGCGACGATTTTAGCGCCCAATAAACACGTTTCCCCTCGTGCGTTAATTCCACTTTGCGATGGGAACGAACAAACAACTGAATGCCCAATTCTTCTTCCAGCTGATTGATACGGTGACTTACCGCACTGGGGCTCAGCGACAATTCCTCTGCCGCCAGGGc < 1:100135/300‑1 (MQ=255) ggATACCGGCGTGTAAAGTCACCTAATGCGGGCACCAA‑CCAGCA‑TTGGGCGATAGAGGGCCGGGAATACAGAGTTAACGTTCCCGATAACTCCTGATTTTTGATATCAAGAATTTCCTGGTTCAGGGTATCCAGCGACGATTTTAGCGCCCAATAAACACGTTTCCCCTCGTGCGTTAATTCCACTTTGCGATGGGAACGAACAAACAACTGAATGCCCAATTCTTCTTCCAGCTGATTGATACGGTGACTTACCGCACTGGGGCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGAc < 2:663146/300‑1 (MQ=255) ggATACCGGCGTGTAAAGTCACCTAATGCGGGCACCAA‑CCAGCA‑TTGGGCGATAGAGGGCCGGGAATACAGAGTTAACGTTCCCGATAACTCCTGATTTTTGATATCAAGAATTTCCTGGTTCAGGGTATCCAGCGACGATTTTAGCGCCCAATAAACACGTTTCCCCTCGTGCGTTAATTCCACTTTGCGATGGGAACGAACAAACAACTGAATGCCCAATTCTTCTTCCAGCTGATTGATACGGTGACTTACCGCACTGGGGCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGAc < 1:262358/300‑1 (MQ=255) ggCGTGTAAAGTCACCTAATGCGGGCACCAA‑CCAGCA‑TTGGGCGATAGAGGGCCGGGAATACAGAGTTAACGTTCCCGATAACTCCTGATTTTTGATATCAAGAATTTCCTGGTTCAGGGTATCCAGCGACGATTTTAGCGCCCAATAAACACGTTTCCCCTCGTGCGTTAATTCCACTTTGCGATGGGAACGAACAAACAACTGAATGCCCAATTCTTCTTCCAGCTGATTGATACGGTGACTTACCGCACTGGGGCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATg < 1:396236/298‑1 (MQ=255) gtgtAAAGTCACCTAATGCGGGCACCAA‑CCAGCA‑TTGGGCGATAGAGGGCCGGGAATACAGAGTTAACGTTCCCGATAACTCCTGATTTTTGATATCAAGAATTTCCTTGTTCAGGGTATCCAGCGACGATTTTAGCGCCCAATAAACACGTTTCCCCTCGTGCGTTAATTCCACTTTGCGATGGGAACGAACAAACAACTGAATGCCCAATTCTTCTTCCAGCTGATTGATACGGTGACTTACCGCACTGGGGCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTgg < 2:3675/300‑1 (MQ=255) gtgtAAAGTCACCTAATGCGGGCACCAA‑CCAGCA‑TTGGGCGACAGAGTGCCGGGAATACAGAGTTAACGTTCCCGAGAACTCCTGATTTTTGATATCAAGAATTTCCTGGTTCAGGGTATCCAGCGACGATTTTAGCGCCCAATAAACACGTTTCCCCTCGTGCGTTAATTCCACTTTGCGATGGGAACGAACAAACAACTGAATGCCCAATTCTTCTTCCAGCTGATTGATACGGTGACTTACCGCACTGGGGCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTgg < 2:3822/300‑1 (MQ=255) tgtAAAGTCACCTAATGCGGGCACCAA‑CCAGCA‑TTGTGCGATAGAGTGCCTGGAATACAGAGTTAACGTTCCCGATAACTCCTGATTTTTGATATCAAGAATTTCCTGGTTCAGGGTATCCAGCGACGATTTTAGCGCCCAATAAACACGTTTCCCCTCGTGCGTTAATTCCACTTTGCGATGGGAACGAACAAACAACTGAATGCCCAATTCTTCTTCCAGCTGATTGATACGGTGACTTACCGCACTGGGGCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTgg < 2:480296/299‑1 (MQ=255) aaGTCACCTAATGCGGGCACCAA‑CCAGCA‑TTGGGCGATAGAGGGCCGGGAATACAGAGTTAACGTTCCCGATAACTCCTGATTTTTGATATCAAGAATTTCCTGGTTCAGGGTATCCAGCGACGATTTTAGCGCCNAATAAACACGTTTCCCCTCGTGCGTTAATTCCACTTTGCGATGGGAACGAACAAACAACTGAATGCCCAATTCTTCTTCCAGCTGATTGATACGGTGACTTACCGCACTGGGGCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCAGcc > 2:531029/1‑300 (MQ=255) aCCTAATGCGGGCACCAA‑CCAGCA‑TTGGGCGATAGAGGGCCGGGAATACAGAGTTAACGTTCCCGATAACTCCTGATTTTTGATATCAAGAATTTCCTGGTTCAGGGTATCCAGCGACGATTTTAGCGCCCAATAAACACGTTTCCCCTCGTGCGTTAATTCCACTTTGCGATGGGAACGAACAAACAACTGAATGCACAATTCTTCTTACAGCTGATTGATACGGTGACTTACCGCACTGGGGCTCAGCGACAATTCCTCTGCCGACAGGGCGAAGGACTGATGCCTGGCAGCCACTTc > 2:246976/1‑300 (MQ=255) ccTAATGCGGGCACCAA‑CCAGCA‑TTGGGCGATAGAGGGCCGGGAATACAGAGTTAACGTTCCCGATAACTCCTGATTTTTGATATCAAGAATTTCCTGGTTCAGGGTATCCAGCGACGATTTTAGCGCCCAATAAACACGTTTCCCCTCGTGCGTTAATTCCACTTTGCGATGGGAACGAACAAACAACTGAATGCCCAATTCTTCTTCCAGCTGATTGATACGGTGACTTACCGCACTGGGGCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCAGCCACTTCa > 1:50161/1‑300 (MQ=255) | GCGCCCAACTATGCCATTCATCCGTACCGGAGTCGTTGCTCCATGCCTGTCTGTCATGGAGCAACGTACAGTGACACAGGTTAATTACCGTGTTGGTTAAAGCATGTCTTTGAGCGTATTCCGGGCTACATACTGGCAGGATTTCTTCATCCATCAGAAAGTGATGAGTGAGTTGCGCTGACGGCGCATCATCAAAGTAGATCGCCAAATCGATTCCGGCACGTTGCAGATTGACGTTGTCATTACCAGTGAGCACGGTGAGCGAAATAGACGGATACCGGCGTGTAAAGTCACCTAATGCGGGCACCAA‑CCAGCA‑TTGGGCGATAGAGGGCCGGGAATACAGAGTTAACGTTCCCGATAACTCCTGATTTTTGATATCAAGAATTTCCTGGTTCAGGGTATCCAGCGACGATTTTAGCGCCCAATAAACACGTTTCCCCTCGTGCGTTAATTCCACTTTGCGATGGGAACGAACAAACAACTGAATGCCCAATTCTTCTTCCAGCTGATTGATACGGTGACTTACCGCACTGGGGCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCAGCCACTTCA > NC_000913/2476969‑2477561 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |