| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1105173 = | 127 (1.340) | 15 (0.160) | 13/588 | 5.1 | 10.6% | coding (213/333 nt) | csgC | curlin chaperone |
| ? | NC_000913 | = 1300693 | NA (NA) | noncoding (1195/1195 nt) | IS5 | repeat region | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
AATGATTAGTCATCCTTGAGGGTTGTGTTATCCATACTTTCAGGTTGGCTGATTCGCAGCAGACCATTCTCTCCAGATTCATCTTATGCTCGATATTTCAACAAATTAAGACTTTTCTGAAGAGGGCGGCCATTGTTGTGATAAATGAAGTGACTGTCCATCAGAAACAGTAACAACTATTTTCACCCGATCGTCCGGGGAAATATTTAAACTCAACTTCGTCAAAg‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/1105398‑1105173‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAATAACATCGCCAGTTGGTTATCGTTTTTCAGCAACCCCTTGTATCTGGCTTTCACGAA < NC_000913/1300693‑1300428 acTGATTAGTCATCCTTGAGGGTTGTGTTATCCATACTTTCAGGTTGGCTGATTCGCAGCAGACCATTCTCTCCAGATTCATCTTATGCTCGATATTTCAACAAATTAAGACTTTTCTGAAGAGGGCGGCCATTGTTGTGATAAATGAAGTGACTGTCCATCAGAAACAGTAACAACTATTTTCACCCGATCGTCCGTGGAAATATTTAAACTCAACTTCGTCAAAGGAAGGTGCGAATAAGCGTGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATT < 2:309378/297‑1AATGATTAGTCATCCTTGAGTGTTGTGTTATCCATACTTGCAGGTTGGCTGATTCGCAGCAGACCATTCTCTCCAGATTCATCTTATGCTCGATATTTCAACAAATTAAGACTTTTCTGAAGAGGGCGGCCATTGTTGTGATAAATGAAGTGACTGTCCATCAGAAACAGTAACAACTATTTTCACCCGATCGTCCGGGGAAATATTTAAACTCAACTTCGTCAAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATT < 2:309405/299‑1 ATACTTTCGGGTTGGCTGATTCGCAGCAGACCATTCTCTCCAGATTCATCTTATGCTCGATATTTCAACAAATTAAGACTTTTCTGAAGAGGGCGGCCATTGTTGTGATAAATGAAGTGACTGTCCATCAGAAACAGTAACAACTATTTTCACCCGATCGTCCGGGGAAATATTTAAACTCAACTTCGTCAAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTT < 2:33732/300‑1 CTTTCAGGTTGGCTGATTCGCAGCAGACCATTCTCTCCAGATTCATCTTATGCTCGATATTTCAACAAATTAAGACTTTTCTGAAGAGGGCGGCCATTGTTGTGATAAATGAAGTGACTGTCCATCAGAAACAGTAACAACTATTTTCACCCGATCGTCCGGGGAAATATTTAAACTCAACTTCGTCAAAGGAAGGTGCGAATAAGCGGNGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGA > 2:619119/1‑300 ATTCATCTTATGCTCGATATTTCAACAAATTAAGACTTTTCTGAAGAGGGCGGCCATTGTTGTGATAAATGAAGTGACTGTCCATCAGAAACAGTAACAACTATTTTCACCCGATCGTCCGGGGAAATATTTAAACTCAACTTCGTCAAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAG < 2:222500/300‑1 ATCTTATGCTCGATATTTCAACAAATTAAGACTTTTCTGAAGAGGGCGGCCATTGTTGTGATAAATGAAGTGACTGTCCATCAGAAACAGTAACAACTATTTTCACCCGATCGTCCGGGGAAATATTTAAACTCAACTTCGTCAAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCATATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGA > 2:23964/1‑299 TATTTCAACAAATTAAGACTTTTCTGAAGAGGGCGGCCATTGTTGTGATAAATGAAGTGACTGTCCATCAGAAACAGTAACAACTATTTTCACCCGATCGTCCGGGGAAATATTTAAACTCAACTTCGTCAAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTG < 2:387871/300‑1 GGCCATTGTTGTGATAAATGAAGTGACTGTCCATCAGAAACAGTAACAACTATTTTCACCCGATCGTCCGGGGAAATANTTAAACTCAACTTCGTCAAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCC < 1:169613/300‑1 TTGTTGTGATAAATGAAGTGACTGTCCATCAGAAACAGTAACAACTATTTTCACCCGATCGTCCGGGGAAATATTTAAACTCAACTTCGTCAAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGT < 1:691627/300‑1 AAGTGACTGTCCATCAGAAACAGTAACAACTATTTTCACCCGATCGTCCGGGGAAATATTTAAACTCAACTTCGTCAAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCC < 1:68165/218‑1 AAGTGACTGTCCATCAGAAACAGTAACAACTATTTTCACCCGATCGTCCGGGGAAATATTTAAACTCAACTTCGTCAAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCC > 2:68165/1‑218 ACTATTTTCACCCGATCGTCCGGGGAAATATTTAAACTCAACTTCGTCAAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAATAACATCGCCAGTTGGTTATCGTTTTTCAGCAACCCCTTG < 1:694651/300‑1 ACTATTTTCACCCGATCGTCCGGGGAAATATTTAAACTCAACTTCGTCAAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTNCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTACCACTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAATAACATCGCCAGTTGGTTATCGTTTTTCAGCAACCCatt > 2:255952/1‑296 ACTATTTTCACCCGATCGTCCGGGGAAATATTTAAACTCAACTTCGTCAAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTAGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTNCTTCGCCATTTAAGGCGTTATCCCAAGTTTTTAGTGAGATCTCTACCACTGACGTATCATTCGGTCCGCCCGCAACAGGTTGGCCAGCGTGAATAACATCGCAAGTTGGTTATCGTTTTTCAGCAACACCTT > 2:255534/1‑299 GTCCGGGGAAATATTTAAACTCAACTTCGTCAAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGTCCGCCCNAAACAGGTTGGCCAGCGTGAATAACATCGCAAGTTGGTTATCGTTTTTCAGCAACCCCTTGTATCTGGCTTTCACGAA > 1:560528/1‑300 AATGATTAGTCATCCTTGAGGGTTGTGTTATCCATACTTTCAGGTTGGCTGATTCGCAGCAGACCATTCTCTCCAGATTCATCTTATGCTCGATATTTCAACAAATTAAGACTTTTCTGAAGAGGGCGGCCATTGTTGTGATAAATGAAGTGACTGTCCATCAGAAACAGTAACAACTATTTTCACCCGATCGTCCGGGGAAATATTTAAACTCAACTTCGTCAAAg‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/1105398‑1105173‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAATAACATCGCCAGTTGGTTATCGTTTTTCAGCAACCCCTTGTATCTGGCTTTCACGAA < NC_000913/1300693‑1300428 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |