New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 78122258 (0.530)6 (0.070) 5/446 8.2 10.9% noncoding (76/76 nt) lysY tRNA‑Lys
?NC_000913 781653 = 55 (0.670)intergenic (+1/‑432) lysQ/nadA tRNA‑Lys/quinolinate synthase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

ATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGAC  >  NC_000913/780927‑781514
                                                                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                                                                                         
aTCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGNCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGttt                                                                                                                                                                                                                                                                                                       >  1:580388/1‑300 (MQ=255)
                                    cggaaGCAACGGCCCGTAGGTCAAGCGAAGCAAGTCATCCTGAACGACCAACCACCAATAACATCCGGTTCGGTAGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTTGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAAc                                                                                                                                                                                                                                                                  <  1:503728/296‑1 (MQ=17)
                                    cGTCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGNGGTCGGCGGTTCGATCCCGTCATCACNCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAAc                                                                                                                                                                                                                                                                  <  2:567202/300‑1 (MQ=255)
                                                      gggCGAACGAAGCGAGTCATCCTGCACGACCCACCACTAATGACGGTGGTTTCGTTGGAAGTAGTTTGTATTATCCAGCGCAGCCTCTGTTGATTAGCTCAGCTGTGAGAGCACCTCCCTTACAATGAGGGGTTCGGTGGTTTGCTTCTTTTATTATTCGCTAATCGGGTTGTAAGCGCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTGACGTTGGACTCGGGTGTGAAGCGTGAAGGATAACGTTGCGCCAGCAACGGcc                                                                                                                                                                                                                                               <  1:794452/300‑1 (MQ=16)
                                                            gcgaagcgaGTCATCCTGCACGACCCACCACTCGTGACGGTTGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAgg                                                                                                                                                                                                                                         <  1:154525/300‑1 (MQ=255)
                                                                        aTCCTGCACGACCCACCACTCATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCCGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGAACCACCAGTTTTACCATCAAACTCAGATNTTAAGCGTGAAGGATACCGTTGCGCCAGCAACGGCCCGTAGGGCGagngaagcg                                                                                                                                                                                                                             >  2:716410/1‑300 (MQ=255)
                                                                        aTCCTGCACGACCCACCACTACTGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTACCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTCTAATCAATTGGTCGCAGGCTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGTGCCAGCAACGGCCCGTAGGGCGagcgaagcg                                                                                                                                                                                                                             >  2:674769/1‑300 (MQ=255)
                                                                        aTCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGagcgaagcg                                                                                                                                                                                                                             >  1:500841/1‑300 (MQ=255)
                                                                        aTCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACCCAGATGTTAAGCATGAAGGATAACGTTGCGCCAGCAACGGCAAGTAGGGCgagcggagcg                                                                                                                                                                                                                             >  1:764235/1‑300 (MQ=255)
                                                                           cTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCGGCAACGGCCCGTAGGGCGAGCGAAGCGAGt                                                                                                                                                                                                                          >  2:539025/1‑300 (MQ=255)
                                                                           cTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCAACCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGt                                                                                                                                                                                                                          >  1:699045/1‑300 (MQ=255)
                                                                           cTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTACCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGCTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCTAGCAACGGCACGTAGGGCGAGCGAAGCGAgg                                                                                                                                                                                                                          >  2:421264/1‑299 (MQ=255)
                                                                                  aCCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTg                                                                                                                                                                                                                   >  1:443396/1‑300 (MQ=255)
                                                                                  aCCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTCTAACATCACAATCAGATGTTACGCGTGAAGGCTACCGTTGCGCCAGCAACGGCACGTAGGGCGAGCGAAGCGAGTCCTCCTg                                                                                                                                                                                                                   >  2:515763/1‑300 (MQ=17)
                                                                                  aCCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTTAAAATCAACCTCAGAGGTGAAGTTTGAAGGGTGACGTTGCGCAAGAAACggaacataaggcaggtgaagtggggcatcctg                                                                                                                                                                                                                   >  2:744346/1‑270 (MQ=17)
                                                                                     caccacTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCTGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACGCAGATTTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCAc                                                                                                                                                                                                                <  1:217007/300‑1 (MQ=255)
                                                                                     caccacTAATCACGTTTGGTTCGTTGTAAGTAGGTTGTAGTATCCAGCACAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAATGAGGGGGTCGTCGGTTCGATCCCTTCATCACCCACCACTCGTGTCGTTAGCTCAGTTGGTAGAGCATTTGACTTTGAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGGTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAATGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCAc                                                                                                                                                                                                                <  1:54551/300‑1 (MQ=14)
                                                                                              gcgagatgtgtataagagacagagtTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTCAAAATCAACCTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCAGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACccacca                                                                                                                                                                                                      >  1:451644/23‑300 (MQ=14)
                                                                                                  ggtgggtgcggggggatggggttGTAGTATCCAGCGCAGTATCGGGTGATTAGCNCAGCTGGGAGAACACCTCCCTTACAAGGAGGGGGGCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCNCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCt                                                                                                                                                                                                  <  2:798496/279‑1 (MQ=14)
                                                                                                  acccaccactaacatagttagttGTAGTATCCAGCGTAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGTTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGCTGTTAAGCGTGAGGGGTACCGTTGAGCAAGCAACGGCCAGTAGGGCGAGCGAAGCGAGTCCTCCTGCACAACCCCCCAATCt                                                                                                                                                                                                  >  1:719120/22‑300 (MQ=11)
                                                                                                                    agtTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATTTCAAAGATTgatcccatgt                                                                                                                                                                                >  1:483703/1‑291 (MQ=255)
                                                                                                                    agtTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCACGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCACCGAGt                                                                                                                                                                                >  1:356621/1‑300 (MQ=255)
                                                                                                                       ttGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCAGAGTaaa                                                                                                                                                                             >  2:538700/1‑300 (MQ=255)
                                                                                                                         gtagtaTCCAGCGTAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTACCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGAACCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCACGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAAt                                                                                                                                                                         >  1:252830/1‑300 (MQ=255)
                                                                                                                         gtagtaTCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAACCTCAGATGTTAAGCATGAAGGATACCTTTGCGCCAGCAAAGGCCCGTAGGGCGAGCGAAGCGAGTGATCCTGCACGAACCACCAAttttgagggggggaagagagtaaaag                                                                                                                                                                           >  1:129783/1‑275 (MQ=14)
                                                                                                                         gtagtaTCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCAACCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAAtatcaaaaagcgccctaacggcgatt                                                                                                                                                                           >  1:752739/1‑275 (MQ=255)
                                                                                                                              aTCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAAtgtaaaaaagtgccccaaaggcgctcttttg                                                                                                                                                                      >  1:263506/1‑270 (MQ=14)
                                                                                                                                   gcgcAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGt                                                                                                                                                               >  1:696074/1‑300 (MQ=255)
                                                                                                                                   gcgcAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCACGTAGGGCGAGCGAAGCGAGTAATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCCGGt                                                                                                                                                               >  1:476489/1‑300 (MQ=255)
                                                                                                                                   gcgcAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAATCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCAACGAGTAAAAATCTTTCCGGt                                                                                                                                                               >  1:68744/1‑300 (MQ=255)
                                                                                                                                        gTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTACCATCAACCTCCGACGTTAAGCGTGAAGGGTACCGTTTCGCCAGCACCGGCCCGTAGGACGCGCGAATCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGAACCGAGTAAAAATCTTTAAGGTAacac                                                                                                                                                          >  2:362335/1‑300 (MQ=17)
                                                                                                                                        gTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACAcc                                                                                                                                                         >  1:455208/1‑300 (MQ=255)
                                                                                                                                        gTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCAACCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCACGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAacac                                                                                                                                                          >  2:243486/1‑300 (MQ=255)
                                                                                                                                              ggTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTAt                                                                                                                                                    <  2:674412/300‑1 (MQ=255)
                                                                                                                                              ggTGATTAGCCCAGCTGGGAGAGCACCTCCCTGACAAGTAGGGGGTCGGCGGTTCAACCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTAt                                                                                                                                                    <  2:157467/300‑1 (MQ=255)
                                                                                                                                                 gATTAGCTCAGCTGGGAGAGCACCTCCCTTACAATGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTGTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATGGGCCCCGAGTAAAAATCTTTCATGTAACACCCGTATGGGt                                                                                                                                                <  2:251323/300‑1 (MQ=255)
                                                                                                                                                      gCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGACAACGTCGCGCAAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCACAGAGTAAAAATCTTTAAGGTAACACCCGTATGGGGCGtt                                                                                                                                            >  2:67534/1‑300 (MQ=255)
                                                                                                                                                          aGCTGGTAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTc                                                                                                                                       <  2:449238/300‑1 (MQ=255)
                                                                                                                                                           gCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTACGCGTGAAGGATAACGTTGCGCAAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTc                                                                                                                                       >  1:494559/1‑300 (MQ=255)
                                                                                                                                                                     cccttCCCTTATAATGAGGGGGTCGGCAGTTCGATCCCGTCCGCACCTACCACTCGGGTCGCTAGCTCAGTTGGTAAAACAGTTGACTTTTAATCAATTGTTCGCAGTGTCGAGTCCTGCACGACCCATCAGTTTTAACATCAAACTCAGATTTTAAGCGTTAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTaga                                                                                                                             <  2:272314/296‑1 (MQ=21)
                                                                                                                                                                          cccTTACAAGGAGTGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTTAAAATCAACCCCAGATGCTACGCGTGAAGGCTAACGTTGCGCCAGCAATGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGAACCACCAATCTTAAAGGTTGGAACCGGGTAAACATCTTTAAGGTATCACCCGTATGGGTCTTTAGCTCAGTTGTTAGAGCAGt                                                                                                                        >  1:746768/1‑300 (MQ=17)
                                                                                                                                                                                cAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTAAGTTGGTAGAGCAGTTGaatt                                                                                                                  >  1:255831/1‑297 (MQ=255)
                                                                                                                                                                                                        cccGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGa                                                                                          >  1:412810/1‑300 (MQ=255)
                                                                                                                                                                                                            gcaacaaccaacccTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATcc                                                                                      <  1:250146/287‑1 (MQ=255)
                                                                                                                                                                                                                    caccacTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGAc                                                                              <  2:408009/300‑1 (MQ=255)
                                                                                                                                                                                                                             ggTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTACGCGTGAAGGATAACGTTGTGCCANCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGNCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGGCTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAAtg                                                                     >  2:692903/1‑299 (MQ=255)
                                                                                                                                                                                                                                        cAGTTGGTAGAGCAGTTGACTTTTAATCAATNGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTCAACATCGCCACCAGCCGCTAAACTTGTAGACCACCTCTGCCTCCTCCACAGCCCTNAGAGCGAACAACCCGATTCCTCCTACACAACCCCCCAATCCTCACAACTATCCCCGATTACAACTCTTTCAAGTAACACCCGTATGGGTCGTTAGTTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCAACAATTTAAACGTGGtt                                                          >  2:602330/1‑300 (MQ=9)
                                                                                                                                                                                                                                          gTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTCCGCGTGACGGCTAACGTTGCGCCAGCACTGGCACGTAGGGCGAGCGAAGCGAGTCCTCCTGCACACACCACCAATCTTAACGGCTGGGACCGAGTAAAAATCTCGAAGGTACCAACCTTACAGTTCGTTCGCTCAATCTGTCGCACAGGTTACTTTTAATCAATTGGTCGCAGGTTTGAATCCGGCACGACCCACAGGTTTAAGGGTGGttcc                                                        >  2:114173/1‑298 (MQ=9)
                                                                                                                                                                                                                                              ttAGAGCAGTTTAATTTTAGTCAGTTGGTCGCATGTTCGAACCCTGCACGAACCACCAGTTTTAACATCAAACTCCGATGTTAAGCGGTAAGGATAACGTTGCGCTAGCAACGGCCCTTAGGGCGAGCGAAGCGAGTCACCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTCGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGt                                                    <  2:37365/299‑1 (MQ=38)
                                                                                                                                                                                                                                              gTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGt                                                    >  1:354409/1‑300 (MQ=255)
                                                                                                                                                                                                                                                  agCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGACTTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCTCGTGGTTCGAGCTAGGGGGGTCGTAGGGGGTGATAAGATAAGTTGAAAGGGGGGTTTCGGTGAGGAGGTTTTTGTGTAACACCCGGATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTagag                                                <  1:543905/300‑1 (MQ=9)
                                                                                                                                                                                                                                                          acgtttAATCAAGTAGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTGGCGCCAGCAACGGTCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTGCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGaa                                        <  1:119616/297‑1 (MQ=255)
                                                                                                                                                                                                                                                                 ctcacttGGTCGCAGGTGCGAATCCTACACAACCTACCAGTTTTAACATCGAACCCATATGTGAAGCGTTAAGGATAACGTTGCGTCGGCAACGGCACGTAGGGCGAGCGAAGCGAGTCAGCCTGTACGACCAACCAACCTGAAAGATGGGTACCGAGTAAAAAGTCTCCAGGTAACACACGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAAc                                 <  2:825406/295‑1 (MQ=25)
                                                                                                                                                                                                                                                                   cAATTGTTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAATACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAGCGANGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGGAGGGGGCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGt                               <  1:615736/300‑1 (MQ=25)
                                                                                                                                                                                                                                                                                         cTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAACATCTTTCCGGTCACACCCGTATGGGTCGTTAGTTCAGTTGGTAGAGCAGTTGACTTCTAATCAATTGGTCGCAGGCTCGAATCCTGCACGACCCACCAATTTCAAGGTGGTTCCTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAgg         >  1:122735/1‑300 (MQ=38)
                                                                                                                                                                                                                                                                                          tGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAggg        <  1:868266/300‑1 (MQ=255)
                                                                                                                                                                                                                                                                                                aCCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCACGAAGGGCGAGAc  >  1:175120/1‑300 (MQ=255)
                                                                                                                                                                                                                                                                                                aCCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTAGCAGGTTCGAATCCTGCACGAACCACCAATTTAAAGGTGGTTACTGGCAGAGAACGTGACGGATAACGTTGCGTTAGCAAAGGCCCGAAGGGCgaaac  >  1:271808/1‑297 (MQ=255)
                                                                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                                                                                         
ATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGAC  >  NC_000913/780927‑781514

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.