New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 781518	61 (0.510)	6 (0.050)	6/588	10.0	7.0%	intergenic (+74/‑59)	lysZ/lysQ	tRNA‑Lys/tRNA‑Lys
	?	NC_000913	781785 =	99 (0.840)					intergenic (+133/‑300)	lysQ/nadA	tRNA‑Lys/quinolinate synthase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

AACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGA‑CGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCAC  >  NC_000913/781235‑781799                                                                                                                                                                                                                                                                                             |                                                                                                                                                                                                                                                                                          aaCTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGA‑CGAAGTCGAGTCATCCTGCAc                                                                                                                                                                                                                                                                           <  1:464532/300‑1 (MQ=255) aaCTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGAGTGGCCCCGAGTAAAAATCTTGCAGTGAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGA‑CGAAGTCGAGTCATCCTGCAc                                                                                                                                                                                                                                                                           <  1:145341/300‑1 (MQ=255)             aaatgtggaggggaaCGTTGCGTCGGAAACGGCCAGTAGGGCGAGCGAAACGAGTCAGCCGGTAAGACCAACCAACCTGAAAGAGTGGTCCCGATTAGAAGTCTTTCAGGTAACACCCATATGGGTCGTTAGCTCAGTTGTTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCTAGA‑CGAAGTCGAGTCATCCTGCACGACCCACCATcc                                                                                                                                                                                                                                                               <  2:111610/287‑1 (MQ=18)                  tGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGA‑CGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAAt                                                                                                                                                                                                                                                          <  1:894906/300‑1 (MQ=255)                    aagggtcaCGTTGCGCTAGTAACGGCCCGTAGGGTGAGTTAAGCGAGTCATCCTGCACGACCCACCAATTTTAAAGATTGGCCCCTAGTAAAAATCTTTCAGGTAACACCCGTATTGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTCTTAATCAATTGGTCGCAGGTTCGAATNCTGCACGACCCGCCAATTTAAAGGTGGTTACTGGTAGAGAACGTGGAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCTAGA‑CGAAGTCGNGTCATCCTGCACGACCCACCATCCTGAATGa                                                                                                                                                                                                                                                        <  2:671775/293‑1 (MQ=255)                      ggATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGA‑CGAAGTCGAGTCATCCTGCACGACCCACCATCCTGCATGAtt                                                                                                                                                                                                                                                      >  1:502789/1‑300 (MQ=255)                                     cccctgcgagatgtgtataagagacaggaGTCATCCTGCACGACCCACCAATCTNAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGA‑CGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATcc                                                                                                                                                                                                                                       <  2:709986/273‑1 (MQ=255)                                      gCAACGGCCCGTAGGGCGAGCGAAGCGAGTCNTCCTGCACGACCCACCAATATTAAAGATTGGCCCAGAGTAGACGTTTTTCAGGTAACACCCGTCTGGTTTGTTGGTTTAGTTGGTATGGCATNTTCCTTTTCATCACCTAGTCGCCGATTCGAATCCTGCACGACCCAACCATTTAAAAGTGGTTCCTGGTAGAGACCTTGACGGCTACCGTCTCATTAACAACGGCACGAAGGGCGAGG‑CGAAGTCGAGTCATCCTGCACAACCCACCATCCTGACTGAGTAAGGCAGCATAGTccc                                                                                                                                                                                                                                      >  2:701196/1‑300 (MQ=255)                                           ggCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGA‑CGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAg                                                                                                                                                                                                                                 <  1:808244/300‑1 (MQ=255)                                                       gagcgaAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGA‑CGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTCGCt                                                                                                                                                                                                                     >  1:367176/1‑300 (MQ=255)                                                            aagcgaGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCAGAGTAAACATCTTTCGGGTCACACCCGTATGGGTCGTTAGCTCAGGTGGTAGGGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGCAGCAGCAATTTAAAGGCGGTTACTGATAGAGAATGTGAAGGATAACGTTGCGTTAGCCGCGGCCCGCAGGGCGAGA‑CGAAGCCGAGCCATCCTGCCTGACCCACCATCCTGAATGCCTACATCCGCATAATCCCGCAAAGGGTCATTCGCTCAGtt                                                                                                                                                                                                                >  2:141892/1‑300 (MQ=255)                                                                gaGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGA‑CGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATccctgtctcttatacacatctccgagccc                                                                                                                                                                                                            >  1:723635/1‑274 (MQ=255)                                                                     aTCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGA‑CGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCa                                                                                                                                                                                                       >  1:441862/1‑300 (MQ=255)                                                                     aTCCTGCACGACCCACCAATCTTAAAGATTGGCCCAGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGTCCGAAGGGCGAGA‑CGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCCGCATAATCACGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCa                                                                                                                                                                                                       >  2:602928/1‑300 (MQ=255)                                                                                         cTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGA‑CGAAGTCGAGTCATCCTGCACGACCCACCATCCTAAATGATTCAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTgg                                                                                                                                                                                   >  2:429732/1‑300 (MQ=255)                                                                                                         gAGTAAAAATCTTTCATTTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTNAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCTAGA‑CGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATcc                                                                                                                                                                   <  1:648165/300‑1 (MQ=255)                                                                                                              aaaaCCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAAGCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGA‑CGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGTTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCAc                                                                                                                                                              <  1:321326/300‑1 (MQ=255)                                                                                                                 accTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGGGCAGTTGACTTGTAATCAATGGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGNGTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGA‑CGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGAc                                                                                                                                                           <  1:707744/298‑1 (MQ=255)                                                                                                                        atgTAACACCCGTATGGTTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGTTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGA‑CGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCaa                                                                                                                                                    <  1:294360/298‑1 (MQ=255)                                                                                                                        agttAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGGGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGA‑CGAAGTCGAGTCACCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCaa                                                                                                                                                    <  1:370177/297‑1 (MQ=255)                                                                                                                         ggTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGA‑CGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTCGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGCATCCTGCACGACccaccact                                                                                                                                                   >  2:336056/1‑298 (MQ=255)                                                                                                                              cacCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGA‑CGAAGTCGAGTCATCCTGCACGACCCACCATCCTGANTGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTaaa                                                                                                                                              >  1:651083/1‑300 (MQ=255)                                                                                                                              cacCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGA‑CGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTaaa                                                                                                                                              >  1:262607/1‑300 (MQ=255)                                                                                                                              cacCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGA‑CGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCAGCAAGGGGTCGTTAGCTAAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCAACCAATGTaaa                                                                                                                                              >  1:262253/1‑300 (MQ=255)                                                                                                                                cccttattggTCGTTAGCTCATTTTTTAGAGCAGTCGCCTTTTCATCACTTGTTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAATTTGTTACGTGTATAGAACGTGAGGGAGAACGTTGCGTTAGCAACGATACTAATGGTTAAATCGA‑GTCGAGTCATACGGCATGACCCGCTATCCGGAATAATTGAGGCATCGTGATCCCACAGGGGGGTGGTAGCGTAGGTGGTGGAGCAGGTGACGGTTAATAAGTTGGGCGCAGGGGCGAATCCTGCACGACCCACCAATGTaaaaa                                                                                                                                            <  1:621420/292‑1 (MQ=255)                                                                                                                                cccGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGA‑CGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTaaaaa                                                                                                                                            >  1:818004/1‑300 (MQ=255)                                                                                                                                  cGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGA‑CGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAg                                                                                                                                          >  1:895559/1‑300 (MQ=255)                                                                                                                                  cGTATGGGTCGTTAGCGCAGTTGGTAGAACAGTTGACTTTTAATCAATTGGGCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGA‑CGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAg                                                                                                                                          <  2:867662/300‑1 (MQ=255)                                                                                                                                           cGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGA‑CGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCAAGCAAGGGGTCGTTAGCTCAGTTGGCAGAGCCGTTGACTTTTAATCAATTGGTCTCAGTTTCGAATCCTGCACGACCCACCCCTGTaaaacaacacccccaa                                                                                                                                 >  2:460148/1‑288 (MQ=25)                                                                                                                                                     gTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGA‑CGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCAGCAAGGGGTCGTTAGCTAAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCttttt                                                                                                                       >  2:555935/1‑300 (MQ=255)                                                                                                                                                         gTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGACCGTGAAGGATAACGTTGCGTTAGCAACGGCACGACGGGCGAGG‑CGAAGTCGAGTCATCCTGCACGACCCACCATCCTAAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCCGTTGACTTTTAATCAATTGGTCGCAGGTTTGCATCCTGTACGACTCACCAATGTAACAAAGCGCCCTAAAGACGATTTTTTGCt                                                                                                                   >  2:297037/1‑300 (MQ=37)                                                                                                                                                         gTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCACGAAGGGCGAGA‑CGAAGTCGAGTCATCCTGCACGACCCACCATCCTAAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTCGCTCAGTTGTTAGAGCAGTTAACTTTCCCTCAATTGGTCGCGGGTTCGAATCCGGCCCGACCCACCAATGTACGACAGCGCCATAAGGACGTTTTTTTGCt                                                                                                                   >  2:296179/1‑300 (MQ=25)                                                                                                                                                          tagaccaatttaCTTTTAATCAATCGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAATGTGATTACTGGTAGGGAACGTGGAGGATAACGTTGCGTTAGCAACGGCCCGAGGGGTTAGA‑CGAGGTCGAGTCATCCTGAAAGATCTACTATCTTGAATGAGTAAGGTAGCATAATCACGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTa                                                                                                                  <  1:560047/289‑1 (MQ=21)                                                                                                                                                                 gTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAANGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGA‑CGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCAGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCCGGTTCGAATCCTNCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGa                                                                                                           >  2:902907/1‑300 (MQ=255)                                                                                                                                                                      cTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGTTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGA‑CGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTc                                                                                                      <  1:186188/300‑1 (MQ=255)                                                                                                                                                                      cTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGA‑CGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTc                                                                                                      >  1:638498/1‑300 (MQ=255)                                                                                                                                                                              taatgttgcGCAGGTTCGAATCCTATACGACCCACCAAGTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGAGAACGTTGCGTTAGCAACGGCCCGAAGGGCTAGA‑CGAAGTCGAGTCACCCTGCACGACCCATTATCCTGAATGATTAAGGCAGCATAACCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGAtgc                                                                                              <  2:736776/292‑3 (MQ=25)                                                                                                                                                                                                   cctacatgACCCACCACTTGAAAGTTGGTTGCGGGTAGCGAACTTGAAGGATAACGTTGCGGTAGAGACGGCTAGAAGGGCGAGA‑CGAAGTCGAGTCATCCTGCACGACACACCATCCTAAAGGATCAAGTCACCATAACCCCACAAGGGGTCGTTAGCTCAGTGGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTttgagt                                                                         <  2:424447/293‑1 (MQ=17)                                                                                                                                                                                                    cTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGA‑CGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTttgagtt                                                                        >  1:785863/1‑300 (MQ=255)                                                                                                                                                                                                        aCGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCTAGA‑CGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAgc                                                                    <  1:905126/300‑1 (MQ=255)                                                                                                                                                                                                               accaATTTAAGGGTGGTTGCTGGGAGAGAACGTGACGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCTAGA‑CGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAATGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGa                                                             <  2:411846/300‑1 (MQ=255)                                                                                                                                                                                                                   aTTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGA‑CGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATCCTCAAAGATTCGAACATGCAGCAGGTTTGAGTTGAGCGCAGCGAaaca                                                         >  1:617543/1‑300 (MQ=255)                                                                                                                                                                                                                   aTTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGA‑CGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAaaca                                                         >  1:62615/1‑300 (MQ=255)                                                                                                                                                                                                                                  cTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGA‑CGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCACAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTcgcg                                          >  1:602416/1‑300 (MQ=255)                                                                                                                                                                                                                                  cTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGA‑CGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCAGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCNGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCACTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCAAACCTGCAGCAGGTTTGCGTTGAGCGCAGCGAAACAACGGAGCATCTcgcg                                          >  2:239279/1‑300 (MQ=255)                                                                                                                                                                                                                                  cTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGA‑CGAAGTCGAGTCATCCTGCACGACCCACCATCATGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCGGTTGACTTTTAATCAATTGGTCGCAGGTTCGCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCCAAAAACGCTTCTTCGCTATCTGCGATACTCAAAGATCCGAACCCGAAGCAGGTTTGAGTTGAGTGCAGAGAAAAAACAGAGCCGCTcgcg                                          >  1:630598/1‑300 (MQ=25)                                                                                                                                                                                                                                    ggTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGA‑CGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTCTCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCAGCTCgcggc                                        >  2:536620/1‑300 (MQ=255)                                                                                                                                                                                                                                    ggTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGA‑CGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCgcggc                                        >  1:8731/1‑300 (MQ=255)                                                                                                                                                                                                                                        gagaACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGA‑CGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAaacctgtctcttatacacatctcgc                                    <  1:263363/300‑23 (MQ=255)                                                                                                                                                                                                                                              gTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGA‑CGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGNAGAGCAGTTGACTTTTAATCAATTGGNCGCAGGTTCGAATCCTGCACGACCCACCAATGTAGAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTATGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGa                              >  2:641637/1‑300 (MQ=255)                                                                                                                                                                                                                                                ggaGGATAACGTTGTGTTAGTAGCGGTCCGGGGGGTTAGA‑CGGAGGCGAGTCACCCTGAACGATCTGCCATCCTGGATGAGGAATGTAACATAATCCCTCAATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAg                            <  1:721396/298‑1 (MQ=11)                                                                                                                                                                                                                                                  aGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGA‑CGAATTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAGGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAggg                          <  1:447572/300‑1 (MQ=255)                                                                                                                                                                                                                                                   ggATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGA‑CGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGCTTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGgc                         >  2:13263/1‑300 (MQ=255)                                                                                                                                                                                                                                                   ggATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGA‑CGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGgc                         >  1:894378/1‑300 (MQ=255)                                                                                                                                                                                                                                                   ggATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGA‑CGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCACGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCACTANAGGCGCTTTTTTGCTATCTATGATACTCAAAGCTTCGAACCTACAGCAGGTTTAAGTTGCGCGCAGCGAACCAACGACGCCGCTCGTGGCGACGGCATGAAGGgc                         >  2:837383/1‑300 (MQ=21)                                                                                                                                                                                                                                                             gCGTTAGCAACGGCCCGAAGGGCGAGA‑CGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCAGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGagcgaagcg               >  1:83018/1‑300 (MQ=255)                                                                                                                                                                                                                                                                     aacagctcGAAGGGCGAGA‑CGAAGTCAAGTCACCCTGCACGACCCACCACCCTGAATAATTAAGGCAGCATAACCCCACAATTGGTCGTTAGCTCAGTTGGTAGAGCATTTGACTTTGAATCAATTGTTCGTAGGTGCGAATCCGGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTGTGTTGCTATCTGCGATACGCAAAGATTCAAACCTGCAGCAGTTTTTAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATcc       <  2:95049/293‑1 (MQ=17)                                                                                                                                                                                                                                                                     aaCGGCTCGAAGGGCGAGA‑CGAAGTCGAGTCGTCCTGCACGACACACCGTCTTGAGTGAGGAATGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGNTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATcc       <  1:715100/300‑1 (MQ=17)                                                                                                                                                                                                                                                                     aaCGGCCCGGAGGGCGAGA‑CGAAGGCGAGTCATCCTGCACGGCCCACCATCCTTAATGAGTAACGCACCACAACCACGCAATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATcc       <  1:179860/300‑1 (MQ=14)                                                                                                                                                                                                                                                                          cccGAAGGGCGAGA‑CGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCAc  <  1:276625/300‑1 (MQ=255)                                                                                                                                                                                                                                                                          accGAAGGGCGAGA‑CGAAGTCGAATCATCCTGCACAACCCACCATCCTGAATGATTAAGGTAGCATAATCACGCAATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTGGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCACTCGCGGCGACGGCCCGAAGGGCAAGCGAAGCGAGTCATCCTGCAc  <  2:461791/299‑1 (MQ=17)                                                                                                                                                                                                                                                                                             |                                                                                                                                                                                                                                                                                          AACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGA‑CGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCAC  >  NC_000913/781235‑781799

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.