| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1838216 = | 57 (0.500) | 17 (0.150) | 14/598 | 6.4 | 22.7% | coding (1005/1536 nt) | ynjC | putative ABC transporter membrane subunit YnjC |
| ? | NC_000913 | = 1838223 | 59 (0.520) | coding (1012/1536 nt) | ynjC | putative ABC transporter membrane subunit YnjC | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
CAGCCCAGTGTTTGCGCAATCAAAATTAACCGTGAATCAATGCGCTGCCAGGCGGGTTGCAGGATAAACAGCATCCACGGCATCACCCACAGCAGATGCCCCCAGACCACCGCCGTCCAGCTTCCATCCAGTTTCAGCCATAGCGCCAGCGTGTACTGGCCCGCCACCAGTGGCAGAGCAGGTAATAAAATGGGCAACCATAGCCACAACTGGCGACGCTGTGGCCCCCATTCCAGCCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/1838455‑1838216‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCAGCCACAGCAGTAACAGGAGCAAAGCGATGAATGTCGCCACCAGCCCCATTGTCAGGCTGTTGATGAGCGCTTCACTATTGATCGTCGACTGATCCGCGAGGATCGCCAGCAGAACCACACACAGCACACCGGTTAAGGGTAAAAAAATCGCCAGCGTATTGCCCGGCAATAAAGGCGTGGCAGGCTTGCGAACGCCATCTACGCGGGGAATAGTGCGCCGCCAGCTGCGCCATAGCAGATAGCTCAGCAAAACGTAGGCGGCGAGTAACAGCATCAAC < NC_000913/1838223‑1837943 CAGCCCAGTGTTTGCGCAATCAAAATTAACCGTGAATCAATGCGCTGCCAGGCGGGTTGCAGGATAAACAGCATCCACGGCATCACCCACAGCAGATGCCCCCAGACCANCGCCGTCCAGCTTCCATCCAGTTTCAGCCATAGCGCCAGCGTGTACTGGCCCGCCACCAGTGGCAGAGCAGGTAATAAAATGGGCAACCATAGCCACAACTGGCGACGCTGTGGCCCCCATTCCAGCCACCCAGCCACAGCAGTAACAGGAGCAAAGCGATGAATGTCGCCACCAGCCCCATTGTCAGGC < 1:680466/300‑1 GGATAAACAGCATCCACGGCATCACCCACAGCAGATGCCCCCAGACCACCGCCGTCCAGCTTCCATCCAGTTTCAGCCATAGCGCCAGCGTGTACTGGCCCGCCACCAGTGGCAGAGCAGGTAANAAAATGGGCAACCATAGCCACAACTGNCGACGCTGTGGCCCCCATTCCAGCCACCCAGCCACAGCAGTAACAGGAGCAAAGCGATGAATGTCGCCACCAGCCCCATTGTCAGGCTGTTGATGAGCGCTTCACTATTGATCGTCGACTGATCCGCGAGGATCGCCAGCAGAACCAC > 2:625996/1‑300 GTCCAGCTTCCATCCAGTTTCAGCCATAGCGCCAGCGTGTACTGGCCCGCCACCAGTGGCAGAGCAGGTAATAAAATGGGCAACCATAGCCACAACTGGCGACGCTGTGGCCCCCATTCCAGCCACCCAGCCACAGCAGTAACAGGAGCAAAGCGATGAATGTCGCCACCAGCCCCATTGTCAGGCTGTTGATGAGCGCTTCACTATTGATCGTCGACTGATCCGCGAGGATCGCCAGCAGAACCACACACAGCACACCGGTTAAGGGTAAAAAAATCGCCAGCGTATTGCCCGGCAATA > 1:29067/1‑300 cacAGCGCCAGCGTGTACTTGCCCGCCACCAGTCGCAGAGCAGGGAATAAAAGGGGCAACCATAGCCACAACTGTCGACGCGGTGGCCCCTATTCCAGCCACCCAGCCACAGCAGTAACAGGAGCAAAGCGATGACTGTCGCCACCAGCCCCATTGTCATGCTGTTGATGAGCGCTTCGCTATTGATCGTTGACTGATCCGCGAGGATCGTCAGCAGAACCACACACAGCACACCGGTTAAGGGTAAAAAAATCGCCAGCGTATTGCCCGGCAATAAAGGCGTGGCAGGCTTGCGAACGC < 2:299226/297‑1 AGCGTGTACTGGCCCGCCACCAGTGGCAGAGCAGGTAATAAAATGGGCAACCATAGCCACAACTGGCGACGCTGTGGCCCCCATTCCAGCCACCCAGCCACAGCAGTAACAGGAGCAAAGCGATGAATGTCGCCACCAGCCCCATTGTCAGGCTGTTGATGAGCGCTTCACTATTGATCGTCGACTGATCCGCGAGGATCGCCAGCAGAACCACACACAGCACACCGGTTAAGGGTAAAAAAATCGACAGCGTATTGCCCGGCAATAAAGGCGTGGCAGGCTTGCGAACGCCATCTACGC > 1:60088/1‑300 GTGGCAGAGCAGGTAATAAAATGGGCAACCATAGCCACAACTGGCGACGCTGTGGCCCCCATTCCAGCCACCCAGCCACAGCAGTAACAGGAGCAAAGCGATGAATGTCGCCACCAGCCCCATTNTCAGGCTGTTGATGAGCGCTTCACTANTGATCGTCGACTGATCCGCGAGGATCGCCAGCAGAACCACACACAGCACACCGGTTAAGGGTAAAAAAATCGCCAGCGTATTGCCCGGCAATAAAGGCGCGGCAGGCTTGCGAACGCCATCTACGCGGGGAATAGTGAGCCGACAGCT > 2:610830/1‑300 GTGGCAGAGCAGGTAATAAAATGGGCAACCATAGCCACAACTGGCGACGCTGTGGCCCCCATTCCAGCCACCCAGCCACAGCAGTAACAGGAGCAAAGCGATGAATGTCGCCACCAGCCCCATTGTCAGGCTGTTGATGAGCGCTTCACTATTGATCGTCGACTGATCCGCGAGGATCGCCAGCAGAACCACACACAGCACACCGGTTAAGGGTAAAAAAATCGCCAGCGTATTGCCCGGCAATAAAGGCGTGGCAGGCTTGCGAACGCCATCTACGCGGGGAATAGTGCGCCGCCAGCT > 2:581309/1‑300 GGTAATAAAATGGGCAACCATAGCCACAACTGGCGACGCTGTGGCCCCCATTCCAGCCACCCAGCCACAGCAGTAACAGGAGCAAAGCGATGAATGTCGCCACCAGCCCCATTGTCAGGCTGTTGATGAGCGCTTCACTATTGATCGTCGACTGATCCGCGAGGATCGCCAGCAGAACCACACACAGCACACCGGTTAAGGGTAAAAAAATCGCCAGCGTATTGCCCGGCAATAAAGGCGTGGCAGGCTTGCGAACGCCATCTACGCGGGGAATAGTGCGCCGCCAGCTGCGCCATAGCA > 1:876244/1‑300 AAAATGGGCAACCATAGCCACAACTGGCGACGCTGTGGCCCCCATTCCAGCCACCCAGCCACAGCAGTAACAGGAGCAAAGCGATGAATGTCGCCACCAGCCCCATTGTCAGGCTGTTGATGAGCGCTTCACTATTGATCGTCGACTGATCCGCGAGGATCGCCAGCAGAACCACACACAGCACACCGGTTAAGGGTAAAAAAATCGCCAGCGTATTGCCCGGCAATAAAGGCGTGGCAGGCTTGCGAACGCCATCTACGCGGGGAATAGTGCGCCGCCAGCTGCGCCATAGCAGATAGC < 1:55347/300‑1 ACCATAGCCACAACTGGCGACGCTGTGGCCCCCATTCCAGCCACCCAGCCACAGCAGTAACAGGAGCAAAGCGATGAATGTCGCCACCAGCCCCATTGTCAGGCTGTTGATGAGCGCTTCACTATTGATCGTCGACTGATCCGCGAGGATCGCCAGCAGAACCACACACAGCACACCGGTTAAGGGTAAANAAATCGCCAGCGTATTGCCCGGCAATAAAGGCGTGGCAGGCTTGCGAACGCCATCTACGCGGGGAATAGTGCGCCGCCAGCTGCGCCATAGCAGATAGCTCAGCAAAAa > 1:679985/1‑299 ACCATAGCCACAACTGGCGACGCTGTGGCCCCCATTCCAGCCACCCAGCCACAGCAGTAACAGGAGCAAAGCGATGAATGTCGCCACCAGCCCCATTGTCAGGCTGTTGATGAGCGCTTCACTATTGATCGTCGACTGATCCGCGAGGATCGCCAGCAGAACCACACACAGCACACCGGTTAAGGGTAAAAAAATCGCCAGCGTATTGCCCGGCAATAAAGGCGTGGCAGGCTTGCGAACGCCATCTACGCGGGGAATAGTGCGCCGCCAGCTGCGCCATAGCAGATAGCTCAGCAAAAC > 1:772677/1‑300 CCATAGCCACAACTGGCGACGCTGTGGCCCCCATTCCAGCCACCCAGCCACAGCAGTAACAGGAGCAAAGCGATGAATGTCGCCACCAGCCCCATTGTCAGGCTGTTGATGAGCGCTTCACTATTGATCGTCGACTGATCCGCGAGGATCGCCAGCAGAACCACACACAGCACACCGGTTAAGGGTAAAAAAATCGCCAGCGTATTGCCCGGCAATAAAGGCGTGGCAGGCTTGCGAACGCCATCTACGCGGGGAATAGTGCGCCGCCAGCTGCGCCATAGCAGATAGCTCAGCAAAACG > 1:264666/1‑300 GCCACAACTGGCGACGCTGTGGCCCCCATTCAAGCAACACCGCCCCAGGATTAACAGGAGCAAAGCGATGAATATCGCCACCAGCCCCATTGCCAGGCTGTTGATGAGCGCTTCACTATTGATCGTCGACTGATCCGCGAGGATCGCAAGCAGAACCACACACAGCATACCGGTTAAGGGTAAAAAAATCGACAGCGTATTGCCCGGCAATAAAGGCGTGGCGGGCTTGCGAACGCCATCTACGGGGGGAATAGTGCGCAGCACGCTGCGCCACAGCAGATAGCTCAGCAAAACGTAGac > 2:461534/1‑298 CAACTGGCGACGCTGTGGCCCCCATTCCAGCCACCCAGCCACAGCAGTAACAGGAGCAAAGCGATGAATGTCGCCACCAGCCCCATTGTCAGGCTGTTGATGAGCGCTTCACTATTGATCGTCGACTGATCCGCGAGGATCGCCAGCAGAACCACACACAGCACACCGGTTAAGGGTAAAAAAATCGCCAGCGTATTGCCCGGCAATAAAGGCGTGGCAGGCTTGCGAACGCCATCTACGCGGGGAATAGTGCGCAGCCAGCTGCGCCATAGCAGATAGCTCAGCAAAACGTAGGCGGCG > 2:556065/1‑300 GCGACGCTGTGGCCCCCATTCCAGCCACCCAGCCACAGCAGTAACATGAGCAAAGCGATGAATGTCGCCACCAGCCCCATTGTCAGGCTGTGGATGAGCGCTTCATTATTGATCGTCGACTGATCCGCGAGGATCGCCAGCAGAACCACACACAGCACACCGGTTAAGGGTAAAAAAATCGCCAGCGTATTGCCCGGCAATAAAGGCGTGGCAGGCTTGCGAACGCCATCTACGCGGGGAATAGTGCGCCGCCAGCTGCGCCATAGCAGATAACTCAGCAAAACGTAGGCGGCGAGTAAC < 2:59931/300‑1 GCGACGCTGTGGCCCCCATTCCAGCCACCCAGCCACAGCAGTAACAGGAGCAAAGCGATGAATGTCGCCACCAGCCCCATTGTCAGGCTGTTGATGAGCGCTTCACTATTGATCGTCGACTGATCCGCGAGGATCGCCAGCAGAACCACACACAGCACACCGGTTAAGGGTAAAAAAATCGCCAGCGTATTGCCCGGCAATAAAGGCGTGGCAGGCTTGCGAACGCCATCTACGCGGGGAATACTGCGCCGCCAGCTGCGCCATAGCAGATAGCTCAGCAAAACGTAGGCGGCGAGTAAC < 2:840319/300‑1 TGGCCCCCATTCCAGCCACCCAGCCACAGCAGTAACAGGAGCAAAGCGATGAATGTCGCCACCAGCCCCATTGTCAGGCTGTTGATGAGCGCTTCACTATTGATCGTCGACTGATCCGCGAGGATCGCCAGCAGAACCACACACAGCACACCGGTTAAGGGTAAAAAAATCGCCAGCGTATTGCCCGGCAATAAAGGCGTGGCAGGCTTGCGAACGCCATCTACGCGGGGAATAGTGCGCCGCCAGCTGCGCCATAGCAGATAGCTCAGCAAAACGTAGGCGGCGAGTAACAGCATCAAC < 1:890689/300‑1 CAGCCCAGTGTTTGCGCAATCAAAATTAACCGTGAATCAATGCGCTGCCAGGCGGGTTGCAGGATAAACAGCATCCACGGCATCACCCACAGCAGATGCCCCCAGACCACCGCCGTCCAGCTTCCATCCAGTTTCAGCCATAGCGCCAGCGTGTACTGGCCCGCCACCAGTGGCAGAGCAGGTAATAAAATGGGCAACCATAGCCACAACTGGCGACGCTGTGGCCCCCATTCCAGCCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/1838455‑1838216‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCAGCCACAGCAGTAACAGGAGCAAAGCGATGAATGTCGCCACCAGCCCCATTGTCAGGCTGTTGATGAGCGCTTCACTATTGATCGTCGACTGATCCGCGAGGATCGCCAGCAGAACCACACACAGCACACCGGTTAAGGGTAAAAAAATCGCCAGCGTATTGCCCGGCAATAAAGGCGTGGCAGGCTTGCGAACGCCATCTACGCGGGGAATAGTGCGCCGCCAGCTGCGCCATAGCAGATAGCTCAGCAAAACGTAGGCGGCGAGTAACAGCATCAAC < NC_000913/1838223‑1837943 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |