New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 25355479 (0.850)12 (0.130) 10/598 6.0 13.2% intergenic (+393/+705) yafP/pepD putative N‑acetyltransferase YafP/peptidase D
?NC_000913 273955 = NA (NA)noncoding (1195/1195 nt) IS5 repeat region
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

CTGTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAATAACATCGCCAGTTGGTTATCGTTTTTCAGCAACCCCTTGTATCTGGCTTTCACGAAGCCGAACTGTCGCTTGATGATGCGAAA  >  NC_000913/273948‑274247
       |                                                                                                                                                                                                                                                                                                    
ttattATGGAAGGTGCGAATAAGCGGGGAAATCTTTCTCGGCTGCCTCAGTCATTTCATTTCTTCATGTTTGAGCCGACTTTTTCTCCCGTCAATGCCTTGAATCAGCCTATTTAGACCGCTTCTTCGCCATTTAAGGCGTTATCCCAAGTTTTTAGTGAGATCTCTCCCACCGACGTATCATTCGGTCCGCCCGAAACAGGTTGGCCAGCATGAATAACATCGCCGGTTGGTTCTCGTTTTTCAGCAACCCCTTGTATCTGGCTTTCACGAAGCCGAATTGTCGCTTGATGATGCGaaa  >  2:256215/4‑300 (MQ=11)
       |                                                                                                                                                                                                                                                                                                    
CTGTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAATAACATCGCCAGTTGGTTATCGTTTTTCAGCAACCCCTTGTATCTGGCTTTCACGAAGCCGAACTGTCGCTTGATGATGCGAAA  >  NC_000913/273948‑274247

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.