New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 199973098 (0.800)22 (0.180) 17/594 5.6 18.6% coding (656/801 nt) tcyJ cystine ABC transporter periplasmic binding protein
?NC_000913 2025435 = 95 (0.780)intergenic (‑122/‑76) dsrA/yedP small regulatory RNA DsrA/putative mannosyl‑3‑phosphoglycerate phosphatase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

CGCCGATAAACTCCAGCCGTGGAAAACGGGTTAAATTATGCAGTGGCATAACAGCCTCCGATGTGTGTTGTTGTGATTTTCTTATTATGCACGCTGAAAACGCGTAAATAAAAAAGGCGCTAGTGAAAGCGCCCTTTTTTGTCATTATGCTGATTATTTGGTCACATCAGCACCAAACCATTTTTCGGAAAGGGCTTGCAGAGTGCCATCTTTTTGCATTTCCGCAATTGCATCATTCACTGCTTTCAGCAGGTCCTCATTTCCTTTACGCAGCGCCACGCCAGACTCCTGACGGGAGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1999432‑1999730
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaTCGCTCCCGAAAAAATCATCTTTGATAATTTGTGCGGTTTTGAGAATCATCCTGGTAAGAGGAGTACTGCGCGACTATGTTTTCAATTCAACAACCACTACTGGTTTTTAGCGATCTTGATGGCACCCTGCTGGACAGTCATAGTTATGACTGGCAACCGGCAGCCCCCTGGCTCACCCGTTTACGCGAAGCAAATGTTCCCGTCATTCTCTGTAGCAGTAAAACATCAGCGGAAATGCTGTACTTGCAAAAAACGTTGGGGCTACAAGG  >  NC_000913/2025435‑2025704
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
CGCCGATAAACTCCAGCCGTGGAAAACGGGTTAAATTATGCAGTGGCATAACAGCCTCCGATGTGTGTTGTTGTGATTTTCTTATTATGCACGCTGAAAACGCGTAAATAAAAAAGGCGCTAGTGAAAGCGCCCTTTTTTGTCATTATGCTGATTATTTGGTCACATCAGCACCAAACCATTTTTCGGAAAGGGCTTGCAGAGTGCCATCTTTTTGCATTTCCGCAATTGCATCATTCACTGCTTTCAGCAGGTCCTCATTTCCTTTACGCAGCGCCACGCCAGACTCCTGACGGGAGAT                                                                                                                                                                                                                                                                               <  1:937508/300‑1
                  GTGGAAAACGGGTTAAATTATGCAGTGGCATAACAGCCTCCGATGTGTGTTGTTGTGATTTTCTTATTATGCACGCTGAAAACGCGTAAATAAAAAAGGCGCTAGTGAAAGCGCCCTTTTTTGTCATTATGCTGATTATTTGGTCACATCAGCACCAAACCATTTTTCGGAAAGGGCTTGCAGAGTGCCATCTTTTTGCATTTCCGCAATTGCATCATTCACTGCTTTCAGCAGGTCCTCATTTCCTTTACGCAGCGCCACGCCAGACTCCTGACGGGAGATCGCTCCCGAAAAAATCAT                                                                                                                                                                                                                                                             >  1:529181/1‑300
                          CGGGTTAAATTATGCAGTGGCATAACAGCCTCCGATGTGTGTTGTTGTGATTTTCTTATTATGCACGCTGAAAACGCGTAAATAAAAAAGGCGCTAGTGAAAGCGCCCTTTTTTGTCATTATGCTGATTATTTGGTCACATCAGCACCAAACCATTTTTCGGAAAGGGCTTGCAGAGTGCCATCTTTTTGNATTTCCGCAATTGCATCATTCACTGCTTTCAGCAGGTCCTCATTTCCTTTACGCAGCGCCACGCCAGACTCCTGACGGGAGATCGCTCCCGAAAAAATCATCTTTGATA                                                                                                                                                                                                                                                     >  1:719525/1‑300
                                            GGCATAACAGCCTCCGATGTGTGTTGTTGTGATTTTCTTATTATGCACGCTGAAAACGCGTAAATAAAAAAGGCGCTAGTGAAAGCGCCCTTTTTTGTCATTATGCTGATTATTTGGTCACATCAGCACCAAACCATTTTTCGGAAAGGGCTTGCAGAGTGCCATCTTTTTGCATTTCCGCAATTGCATCATTCACTGCTTTCAGCAGGTCCTCATTTCCTTTACGCAGCGCCACGCCAGACTCCTGACGGGAGATCGCTCCCGAAAAAATCATCTTTGATAATTTGTGCGGTTTTGAGA                                                                                                                                                                                                                                   >  1:88759/1‑300
                                             GCATAACAGCCTCCGATGTGTGTTGTTGTGATTTTCTTATTATGCACGCTGAAAACGCGTAAATAAAAAAGGCGCTAGTGAAAGCGCCCTTTTTTGTCATTATGCTGATTATTTGGTCACATCAGCACCAAACCATTTTTCGGAAAGGGCTTGCAGAGTGCCATCTTTTTGCATTTCCGCAATTGCATCATTCACTGCTTTCAGCAGGTCCTCATTTCCTTTACGCAGCGCCACGCCAGACTCCTGACGGGAGATCGCTCCCGAAAAAATCATCTTTGATAATTTGTGCGGTTTTGAGAA                                                                                                                                                                                                                                  >  1:155267/1‑300
                                                              GTGTGTTGTTGTGATTTTCTTATTATGCACGCTGAAAACGCGTAAATAAAAAAGGCGCTAGTGAAAGCGCCCTTTTTTGTCATTATGCTGATTATTTGGTCACATCAGCACCAAACCATTTTTCGGAAAGGGCTTGCAGAGTGCCATCTTTTTGCATTTCCGCAATTGCATCATTCACTGCTTTCAGCAGGTCCTCATTTCCTTTACGCAGCGCCACGCCAGACTCCTGACGGGAGATCGCTCCCGAAAAAATCATCTTTGATAATTTGTGCGGTTTTGAGAATCATCCTGGTAAGAGGA                                                                                                                                                                                                                 >  2:760299/1‑300
                                                                    TGTTTTGATTTTCTTATTATGCACGCTGAAAACGCGTAAATAAAAAAGGCGCTAGTGAAAGCGCCCTTTTTTGTCATTATGCTGATTATTTGGTCACATCAGCACCAAACCATTTTTCGGAAAGGGCTTGCAGAGTGCCATCTTTTTGCATTTCCGCAATTGCATCATTCACTGCTTTCAGCAGGTCCTCATTTCCTTTACGCAGCGCCACGCCAGACTCCTGACGGGAGATCGCTCCCGAAAAAATCATCTTTGATAATTTGTGCGGTTTTGAGAATCATCCTGGTAAGAGGAGTACTG                                                                                                                                                                                                           <  1:853989/300‑1
                                                                                                                                       TTTTTGTCATTATGCTGATTATTTGGTCACATCAGCACCAAACCATTTTTCGGAAAGGGCTTGCAGAGTGCCATCTTTTTGCATTTCCGCAATTGCATCATTCACTGCTTTCAGCAGGTCCTCATTTCCTTTACGCAGCGCCACGCCAGACTCCTGACGGGAGATCGCTCCCGAAAAAATCATCTTTGATAATTTGTGCGGTTTTGAGAATCATCCTGGTAAGAGGAGTACTGCGCGACTATGTTTTCAATTCAACAACCACTACTGGTTTTTAGCGATCTTGATGGCACCCTGCTGGAC                                                                                                                                        <  1:208463/300‑1
                                                                                                                                                                    CATCAGCACCAAACCATTTTTCGGAAAGGGCTTGCAGAGTGCCATCTTTTTGCATTTCCGCAATTGCATCATTCACTGCTTTCAGCAGGTCCTCATTTCCTTTACGCAGCGCCACGCCAGACTCCTGACGGGAGATCGCTCCCGAAAAAATCATCTTTGCTCATTTGTGCGGTTTTGAGAATCATCCTGGTAAGAGGAGTACTGCGCGACTATGTTTTCAATTCAACAACCACTACTGGTTTTTAGCGATCTTGATGGCACCCTGCTGGACAGTCATAGTTATGACTGGCAACCGGCAGC                                                                                                           >  2:477793/1‑300
                                                                                                                                                                    CATCAGCACCAAACCATTTTTCGGAAAGGGCTTGCAGAGTGCCATCTTTTTGCATTTCCGCAATTGCATCATTCACTGCTTTCAGCAGGTCCTCATTTCCTTTACGCAGCGCCACGCCAGACTCCTGACGGGAGATCGCTCCCGAAAAAATCATCTTTGATAATTTGTGCGGTTTTGAGAATCATCCTGGTAAGAGGAGTACTGCGCGACTATGTTTTCAATTCAACAACCACTACTGGTTTTTAGCGATCTTGATGGCACCCTGCTGGACAGTCATAGTTATGACTGGCAACCGGCAGC                                                                                                           >  2:891288/1‑300
                                                                                                                                                                    CATCAGCACCAAACCATTTTTCGGAAAGGGCTTGCAGAGTGCCATCTTTTTGCATTTCCGCAATTGCATCATTCACTGCTTTCAGCAGGTCCTCATTTCCTTTACGCAGCGCCACGCCAGACTCCTGACGGGAGATCGCTCCCGAAAAAATCATCTTTGATAATTTGTGCGGTTTTGAGAATCATCCTGGTAAGAGGAGTACTGCGCGACTATGTTTTCAATTCAACAACCACTACTGGTTTTTAGCGATCTTGATGGCACCCTGCTGGACAGTCATAGTTATGACTGGCAACCGGCAGC                                                                                                           >  1:447289/1‑300
                                                                                                                                                                      tcgGCACCAAACTATTTTTTGGAAAGGGTTTGCAGAGTGCTATCTTTTTGCATTTTCGTAATTGCATCATTCACTGCTTTCAGTAGTTCCTCATTTCCTTTACTCAGCGCCACGCCAGACTCCTGACGGGAGATCGCTCCCGAAAAAATCATCTTTGATAATTTGTGCGGTTTTGAGAATCATCCTGGTAAGAGGAGTACTGCGTGGCTATGTTTTCAATTCAACAACCACTACTGGTTTTTAGCGATCTTGATGGCACCCTGTTGGATAGTCATAGTTGTGACTGGCAACCGGCAGCCC                                                                                                         <  2:189387/297‑1
                                                                                                                                                                             cgAACCATTTTTCGGAAAGGGCTTGCAGAGTGCCATCTTTTTGCATTTCCGCAATTGCATCATTCACTGCTTTCAGCAGGTCCTCATTTCCTTTACGCAGCGCCACGCCAGACTCCTGACGGGAGATCGCTCCCGAAAAAATCATCTTTGATAATTTGTGCGGTTTTGAGAATCATCCTGGTAATAGGAGTACTGCGCGACTATGTTTTCAATTCAACAACCACTACTGGTTTTTAGCGATCTTGATTGCACCCTGCTGGACAGTCATAGTTATGACTGGCAACCGGCAGCCCCCTGGCT                                                                                                  <  2:168522/298‑1
                                                                                                                                                                             CAAACCATTTTTCGGAAAGGGCTTGCAGGGTGCCATCTTTTTGCATTTCCGCAATTGCATCATTCACTGCTTTCAGCAGGTCCTCATTTCCTTTACGCAGCGCCACGCCAGACTCCTGACGGGAGATCGCTCCCGAAAAAATCATCTTTGATAATTTGTGCGGTTTTGAGAATCATCCTGGTAAGAGGAGTACTGCGCGACTATGTTTTCAATTCAACAACCACTACTGGTTTTTAGCGATCTTGATGGCACCCTGCTGGACAGTCATAGTTATGACTGGCAACCGGCAGCCCCCTGGCc                                                                                                  <  2:167188/300‑2
                                                                                                                                                                             CAAACCATTTTTCGGAAAGGGCTTGCAGAGTGCCATCTTTTTGCATTTCCGCAATTGCATCATTCACTGCTTTCAGCAGGTCCTCATTTCCTTTACGCAGCGCCACGCCAGACTCCTGACGGGAGATCGCTCCCGAAAAAATCATCTTTGATAATTTGTGCGGTTTTGAGAATCATCCTGGTAAGAGGAGTACTGCGCGACTATGTTTTCAATTCAACAACCACTACTGGTTTTTAGCGATCTTGATGGCACCCTGCTGGACAGTCATAGTTATGACTGGCAACCGGCAGCCCCCTGGCT                                                                                                  <  1:914687/300‑1
                                                                                                                                                                                                GGCTTGCAGAGTGCCATCTTTTTGCATTTCCGCAATTGCATCATTCACTGCTTTCAGCAGGTCCTCATTTCCTTTACGCAGCGCCACGCCAGACTCCTGACGGGAGATCGCTCCCGAAAAAATCATCTTTGATAATTTGTGCGGTTTTGAGAATCATCCTGGTAAGAGGAGTACTGCGCGACTATGTTTTCAATTCAACAACCACTAATGGTTTTTAGCGATCTTGATGGCACCCTGCTGGACAGTCATAGTTATGACTGGCAACCGGCAGCCCCCTGGCTCACCCGTTTACGCGAAGCA                                                                               >  2:215050/1‑300
                                                                                                                                                                                                                  TTTTTGCATTTCCGCAATTGCATCATTCACTGCTTTCAGCAGGTCCTCATTTCCTTTACGCAGCGCCACGCCAGACTCCTGACGGGAGATCGCTCCCGAAAAAATCATCTTTGATAATTTGTGCGGTTTTGAGAATCATCCTGGTAAGAGGAGTACTGCGCGACTATGTTTTCAATTCAACAACCACTACTGGTTTTTAGCGATCTTGATGGCACCCTGCTGGACAGTCATAGTTATGACTGGCAACCGGCAGCCCCCTGGCTCACCCGTTTACGCGAAGCAAATGTTCCCGTCATTCTC                                                             <  1:542040/300‑1
                                                                                                                                                                                                                                     GCATCATTCACTGCTTTCAGCAGGTCCTCATTTCCTTTACGCAGCGCCACGCCAGACTCCTGACGGGAGATCGCTCCCGAAAAAATCATCTTTGATAATTTGTGCGGTTTTGAGAATCATCCTGGTAAGAGGAGTACTGCGCGACTATGTTTTCAATTCAACAACCACTACTGGTTTTTAGCGATCTTGATGGCACCCTGCTGGACAGTCATAGTTATGACTGGCAACCGGCAGCCCCCTGGCTCCCCCGTTTACGCGAAGCAAATGTTCCCGTCATTCTCTGTAGCAGTAAAACATCAG                                          >  2:268523/1‑300
                                                                                                                                                                                                                                                               CTCATTTCCTTTACGCAGCGCCACGCCAGACTCCTGACGGGAGATCGCTCCCGAAAAAATCATCTTTGATAATTTGTGCGGTTTTGAGAATCATCCTGGTAAGAGGAGTACTGCGCGACTATGTTTTCAATTCAACAACCACTACTGGTTTTTAGCGATCTTGATGGCACCCTGCTGGACAGTCATAGTTATGACTGGCAACCGGCAGCCCCCTGGCTCACCCGTTTACGCGAAGCAAATGTTCCCGTCATTCTCTGTAGCAGTAAAACATCAGCGGAAATGCTGTACTTGCAAAAAACG                >  1:841600/1‑300
                                                                                                                                                                                                                                                                      CCTTTACGCAGCGCCACGCCAGACTCCTGACGGGAGATCGCTCCCGAAAAAATCATCTTTGATAATTTGTGCGGTTTTGAGAATCATCCTGGTAAGAGGAGTACTGCGCGACTATGTTTTCAATTCAACAACCACTACTGGTTTTTAGCGATCTTGATGGCACCCTGCTGGACAGTCATAGTTATGACTGGCAACCGGCAGCCCCCTGGCTCACCCGTTTACGCGAAGCAAATGTTCCCGTCATTCTCTGTAGCAGTAAAACATCAGCGGAAATGCTGTACTTGCAAAAAAAGTTGGagc         >  1:92640/1‑297
                                                                                                                                                                                                                                                                      CCTTTACGCAGCGCCACGCCAGACTCCTGACGGGAGATCGCTCCCGAAAAAATCATCTTTGATAATTTGTGCGGTTTTGAGAATCATCCTGGTAAGAGGAGTACTGCGCGACTATGTTTTCAATTCAACAACCACTACTGGTTTTTAGCGATCTTGATGGCACCCTGCTGGACAGTAATAGTTATGACTGGCAACCGGCAGCCCCCTGGCTCACCCGTTTACGCGAAGCAAATGTTCCCGTCATTCTCTGTAGCAGTAAAACATCAGCGGAAATGCTGTACTTGCAAAAAACGTTGGGGC         >  1:89952/1‑300
                                                                                                                                                                                                                                                                             GCAGCGCCACGCCAGACTCCTGACGTGAGATCGCTCCCTAAAAAATCATCTTTGATAATTTGTGCGGTTTTGAGAATCATCCTGGTAAGAGGAGTACTGCGCGACTATGTTTTCAATTCAACAACCACTACTGGTTTTTAGCGATCTTGATGGCACCCTGCTGGACAGTCATAGTTATGACTGGCAACCGGCAGCCCCCTGGCTCACCCGTTTACGCGAAGCAAATGTTCCCGTCATTCTCTGTAGCAGTAAAACATCAGCGGAAATGCTGTACTTGCAAAAAACGTTGGGGCTACAAGG  <  2:154516/300‑1
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
CGCCGATAAACTCCAGCCGTGGAAAACGGGTTAAATTATGCAGTGGCATAACAGCCTCCGATGTGTGTTGTTGTGATTTTCTTATTATGCACGCTGAAAACGCGTAAATAAAAAAGGCGCTAGTGAAAGCGCCCTTTTTTGTCATTATGCTGATTATTTGGTCACATCAGCACCAAACCATTTTTCGGAAAGGGCTTGCAGAGTGCCATCTTTTTGCATTTCCGCAATTGCATCATTCACTGCTTTCAGCAGGTCCTCATTTCCTTTACGCAGCGCCACGCCAGACTCCTGACGGGAGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1999432‑1999730
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaTCGCTCCCGAAAAAATCATCTTTGATAATTTGTGCGGTTTTGAGAATCATCCTGGTAAGAGGAGTACTGCGCGACTATGTTTTCAATTCAACAACCACTACTGGTTTTTAGCGATCTTGATGGCACCCTGCTGGACAGTCATAGTTATGACTGGCAACCGGCAGCCCCCTGGCTCACCCGTTTACGCGAAGCAAATGTTCCCGTCATTCTCTGTAGCAGTAAAACATCAGCGGAAATGCTGTACTTGCAAAAAACGTTGGGGCTACAAGG  >  NC_000913/2025435‑2025704

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.