| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,097,158 | 0 | C | T | 28.6% | 40.5 / 18.3 | 42 | intergenic (+329/+407) | ycdU/serX | uncharacterized protein YcdU/tRNA‑Ser |
| Reads supporting (aligned to +/- strand): ref base C (5/25); new base T (8/4); total (13/29) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.01e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
GTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCC‑AACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCG‑GTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTC > NC_000913/1096870‑1097451 | gTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCC‑AACTGGCTGTCGACAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGaaaaaaaa > 1:823021/1‑300 (MQ=255) gAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGGGCTCTTCTTCAACCCCTAAAGTGAGGGGGGAATTGAACAGCTTCGCTCGCACTTCGGGCAGCTCGCTCCCTGCGTTCACGGTCTGTCC‑AACTGGCTGTAGGAGGTTGTCGACACCAGGTCGGGGCTTCTCATTCCCCAGGTGTGTGTAATATACGAAGAAAAAGCCCGTACTTTCGTACGAgtttctagttca > 2:375150/1‑289 (MQ=12) gAGTAACCAGACAGGTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCC‑AACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTaa < 2:105799/300‑1 (MQ=255) gAGTAACCAGACAATTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTAGGCGGGGGCACCCGGTGTGTGCCATCTACGACAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTCAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGTTCACTACGTTCACGGTCTGTCC‑AACTGGCTGTCGCCAGTTGTCGAACCCAGGTCGGGGCTTCTCATCCCCAAGGTGTGTGCAATATACGAAAAAAGAGCCCGTACTTTCGTCTGGGCTCTTCTTTaa > 1:446470/1‑300 (MQ=14) tAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCC‑AACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAata < 1:50944/300‑1 (MQ=255) cAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGTGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGGACGAGCTCTTTTTGAAATATGGCGGTGAGGGGGGGAGTGACTTGCTTCGTTCGCCCTGCGGGCAGCCCGCTCGCTGCGTTCACGTTCTGTAC‑AACTGGCTTGCGCCAGTTGTCGAACCCCGTTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGc < 1:401632/300‑1 (MQ=14) aGTTGATGTGCGCGATTTCCCCTCGCCCGAACAGACGGGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTTAGGGGTGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACGGCGTTCACGGTCTGTCC‑AACTTGCTGTCGCCAGTTGTCGACCCCCGGTCGGTGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGa < 2:83383/300‑1 (MQ=14) aGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGACACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCC‑AACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGa < 1:76266/300‑1 (MQ=255) atctCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCAGGTGGGTGCGATATACGAAAAAAAAGCCCGTACTTTCGGACGAGTTCTTCGTTAAATATGGCGGTGAGGGTGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGGTCACGGTCTGTCC‑AACTGGCGTTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACt < 1:218807/297‑1 (MQ=14) cGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCCCGGTCTGTCC‑AACTGGCTGTCGCCAGTTGTCGACCCCCGGNCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTAAGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACtcgcttcgct > 1:630988/1‑300 (MQ=255) cccTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTACATATAGCGGCAAAGTATAAACTGACCCGCTTCGCTCGCCATACGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCC‑AACTGGCTGTCGAAAGTTGTCGAACCCAGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTATTTACGTATAGCAGTGAggggggggtttacgcgaggcgcttt > 1:39339/1‑282 (MQ=11) gCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCC‑AACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCAc < 1:879737/300‑1 (MQ=35) gtgtgtGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCC‑AACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGATCCTCATCCCCAAGATACATGAAAAATACTAAACAAAAGACCGTACTTTCGTACGAGTTCTTATTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCACGCTCACTGCGTTc > 1:571967/1‑300 (MQ=11) gtgCAACATACGAAAAAAAAGCTCTTACTTTCGTACGAGCGCTTCTTTAAAGAGGGCGGTGAGGGTGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGGTCACGGTCTGTCC‑AACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTCCACgg < 2:742873/300‑1 (MQ=11) gCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCGTTAAATATGGCGGTTAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGTTCTGTCC‑AACTGGCTGTCGCCAGTTGTCGACCCCCGTTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTc < 2:513579/300‑1 (MQ=19) cttTAAATAGGGCGGTGAGGGGGGGAGTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTTGCGGTCTGTCC‑AGCTTGCTTTCGCCAGTTGTCGACCCCCGTTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGc < 1:235900/300‑1 (MQ=11) aaTATGGCGGTTAGGGTGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCC‑AACTGGCTGGCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTtctc < 2:402932/300‑1 (MQ=17) ggCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCC‑AACTTGCTGTCGCCAGTTGTCGACCCCCGTTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATccc < 1:227509/300‑1 (MQ=17) aGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCC‑AACGGGCTGTCGCCAGTTTTCGACCCCCGTTCGGGGCTTCTCATNCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGgtg < 1:638592/300‑1 (MQ=17) gggggggATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCC‑AACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGAAAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGgtgt > 1:317285/1‑300 (MQ=17) gggATTGACGCGCTTCGTTCGCCCTGCGGGCAGCCCGCTCACTACGGTCACGGTCTGTCCGATCTG‑CTTTCGCCAGTTGTCGACCCCCGGTCGTGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGc < 2:551722/300‑1 (MQ=11) cccTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCC‑AACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCAAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCg > 1:166714/1‑300 (MQ=17) gtaggCAGCCCACCCACTGCGTTCACGTTCTGTCC‑AACTTGCTTTCGCCAGTTGTCGACCCCCGGTTGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACt < 1:448214/297‑1 (MQ=255) gCGGTCAGCCCGCTCACTGCGTTCACGGTCTGTCC‑AACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGTGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACt < 1:477292/300‑1 (MQ=17) gCCCTCTCACTGCGTTCACGGCCTGCCA‑AATTTGCTGTCGCCAGTTGTCTACCCCCATTCGTGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCTTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGTTCTGTCCAACTGGTTGTCGCCATTTTTCGAACCCCATTCGGGGCTTCTCAGCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTAc < 1:377656/300‑1 (MQ=11) ttCACGGTCTGTCC‑ATCTGGCTAGCGCCAGTCGTCTACCCCCGTTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTTTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCACCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTaa < 1:199463/300‑1 (MQ=11) caagtccggtccagatGGCTGTCGCCGTTTTTCGACCCCCGTTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAat < 1:780553/285‑1 (MQ=11) aaCTTGCTGTCGCCAGTTGTCGACCCCCGGTCTGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCG‑GTGAgg < 1:296952/300‑1 (MQ=17) tGGCTGTCGCTATTCGTCGACCCCCTGTCTGGGCTTCTCAGCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGGGGGGGGGGTTGACTCGCTTTGCTCGCCTTGTGGGCAGCCTGCTCACTGCGTTCATGTTCTGCCCAACTGGCTGTCGCCAGTTTTTGAACCCCGTTCGGGTCTTCTCATCCCCTCGGTGTGGGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCG‑GTGAggggg < 1:78772/300‑1 (MQ=11) tttctgccctagtttatggtttcggaggcccccGGTGTGTGCGATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTGAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGTTCTGTCCAACTGTCTGTCGCCAGTTGTCGAACCCCGTTCTGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCG‑GTGAGGGGGGGATTGACtcgctt < 1:316547/272‑1 (MQ=11) cccGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCG‑GTGAGGGGGGGATTGACTCGCTTCGCTCGcc < 1:475541/300‑1 (MQ=38) ggTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTACGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATCCGAAAAAAAAGCCCGCACTTTCGTACGAGCTCTTACTTACATATGGCG‑GTGAGGGGGGGATTGACTCGATtcgatcgacccg > 1:134178/1‑295 (MQ=11) tCGGGGTTTCTCGTCCCCCCGGTGTGTGCAATACACTAGAAAAAATCCTGTACGTTCGTACGAGCTCTTCGTTAAATATAGCGGTGAGGGGGGGATGGACCCGCTTCGCTCGCCCTGCTGGCAGCCCGCTCACTGCTTGCACGGTCTGTCTGGCTGGTTGGCGCCAGTTGTCGAACCCCGGGTGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCG‑GTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCg < 2:322467/300‑1 (MQ=11) ttgCTTCTCGTCCCCCTGGTTTGTGCAAGATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATTGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCG‑GTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGc < 1:796404/298‑1 (MQ=255) gggCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCAGGTGTGTGCAATATCCGAACAAAACGCCCGTACTTTCTTACGAGCTCTTCTTTACATCTGGCG‑GTGAGGGGGGGGTTGACTCTCTTCGATCGCCCTGCgttc > 1:186797/1‑297 (MQ=11) cTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTTACCCACCCAACCCGCCACACGGGCAACCCGCTCAATGCGTTCACGATCCGCCCCACCGACTATCACCAGTTGCCGCACCCCGGTCGGGGCTTCTCATCCCCCAGGTGTGTGCAATATACGAAAAAAAAGTACGTACTTTGGTATGAGCGCTTCTTTAAATATGGTG‑GTGAGGGGGGGATTGAATCGCTTAGCTCGCCCTGCGGGCAGc > 1:717165/1‑300 (MQ=2) ccctccGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCG‑GTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCAc < 1:312550/296‑1 (MQ=21) ccccccGGGGGGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCG‑GTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCAc < 1:312559/300‑1 (MQ=25) ccacccGATGTGTGCAATATACTAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAACTATTGCAGTGAGGTGGTGATTGACTCGCTTTGCTCGCCCTGAAGGCAGCCTGCACACTCCGTTTACGGTCTTTCCAGCTGGCTGTCGCCAAGCGGAGAACCCCATTCGGGGCTNCTTATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCG‑GTGAGGGGGGGATTGACTNGCTTCGCTCGCCCTGCGGGCAGCCCGCTCAc < 2:620426/297‑1 (MQ=11) gtgtgtGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGACAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCG‑GTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTACGGGCAGCCCGCTCCCTGCGTTc > 1:201483/1‑300 (MQ=9) gtgtgCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTAACTCGCTCAGCTCACCCTATGGGCCGCCCTCTCACTGCGTTCCCGGTCTGTCCAACTGGCCGCCGCCAGGTGTAGAACCCCGGTCGGGACTTAGCGTCCACCCGGTGTGGGCAATCTCTGAAAAAAAAGCCCGTACTTTTGTACAAGCTCTTCTTTGCATCTG‑CGTGTGATGGAGGGATTGAATAGCGCAGCGCGACCTGTGGGCCGCCCGCTCACTGCGTTCAc > 1:104348/1‑300 (MQ=2) gCAATACACGAAAAAAAAGCCCGTACTTTCGTATGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACGGGCTGTCGCCGGTTGTCGAACCCCGTTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCG‑GTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTc < 1:520864/300‑1 (MQ=19) | GTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCC‑AACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCG‑GTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTC > NC_000913/1096870‑1097451 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |