New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1287084	51 (0.450)	4 (0.040)	3/558	11.0	6.6%	noncoding (153/171 nt)	rttR	small RNA RttR
	?	NC_000913	1287557 =	65 (0.620)					noncoding (66/85 nt)	tyrT	tRNA‑Tyr
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GCTCAAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCTTGGGCAGAATATTTGATTGCGGATTCGTTTGAGAATTCCGGGGCTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACA‑GTCTGCTCCCTTTGGCCGCTCGGGAAC‑CCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTGGGGGAAGGAT  >  NC_000913/1286789‑1287380                                                                                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                                                                                           gcTCAAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCTTGGGCAGAATATTTGATTGCGGATTCGTTTGAGAATTCCGGGGCTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTAATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTc                                                                                                                                                                                                                                                                                                        >  1:794623/1‑300 (MQ=255) gcTCAAGTCGAACCTTGGTCGAAGCTTCTAATCCTTCCCCGCTTGGGCAGAATATTTGATTGCGGATTCGTTTGAGAATTCCGGGGCTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGTCGAACCTTAGTCGAAGATTCTCATCCTTCCCCGAATGGGAAGAATATTTGATTGCGGCTTCGCTTGAGGGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGAttcatc                                                                                                                                                                                                                                                                                                        >  1:224358/1‑296 (MQ=17)      ggTCGAACCTGGGTTGAAGTTTCTCATCCTTCCCCGCTTGGGCAGAATATTGGATTGCGGATCCGTTTGAGAATTCCGGGACTTTTGAAATTGATGTTAGTGGGAGAAGGATTACTCATCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTTCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGTAAGGATTACTCAgcgc                                                                                                                                                                                                                                                                                                   <  2:307688/299‑1 (MQ=17)      aatctaaCCTTGGGCGAGGCTTCTTATCCGTACCCGTTTGTGCAGAGGATTTGATTGCGGATTAGTTGTAGGGTTTCGTGGCTTGTGAAAGTGATGGTGGTGGGGGAAGGACTACTCGGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAgcgc                                                                                                                                                                                                                                                                                                   <  2:270314/295‑1 (MQ=17)      aGTCGAGCCTTGGGCGAAGCTTCTCATCCTTCCCCGCTTGGGCAGAATATGTGANTGCGGATTCGTGTGAGAATTCCGGGGCTTGTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAgcgc                                                                                                                                                                                                                                                                                                   <  2:664100/300‑1 (MQ=255)      aGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCTTGGGCAGAATATTTGATTGCGGATTCGTTTGAGAATTCCGGGGCTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAgcgc                                                                                                                                                                                                                                                                                                   <  1:709366/300‑1 (MQ=255)             ccTTGTTCGAAGCTTCTCATCCTTCCCCGCTTGGGCAGAATATTTGATTGCGGATTCGTTTGAGAATTCCGGTGCTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTgcgcgc                                                                                                                                                                                                                                                                                            <  1:19845/300‑1 (MQ=255)                                   ttCCCCGCTTGGGCAGAATATTTGATTGCGGATTCGTTTGAGAATTCCGGGGCTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGAAAAATATTTAATTGCGGATTCGCTTTAAAGTTCCGGGACTTTTGACAGTGGTGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCTCCTCGCCCTTCTAGTCGTTGCCt                                                                                                                                                                                                                                                                      >  1:45626/1‑300 (MQ=17)                                                                               ttCCGGGGCTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGa                                                                                                                                                                                                                          >  1:484297/1‑300 (MQ=255)                                                                                                      gtggtggGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAACTTCTAATCCTTCCCCGCATg                                                                                                                                                                                                   >  1:232679/1‑300 (MQ=255)                                                                                                        ggtggGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGNTTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGGTTCTCATCCTTCCCCgaagggg                                                                                                                                                                                                 >  1:598519/1‑294 (MQ=255)                                                                                                                  gggttACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGATGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGTCAGAATAttt                                                                                                                                                                                       >  1:382305/4‑300 (MQ=255)                                                                                                                   gactaccctgcgcggcgtgttttgcttttCGTGTCGTTGCCTGCGGTAACGCGTGCTCGCCGACGCTCGAGCCGAAATTTAGTCGGAGCTTCTCATCCTTCCCCGTGTGGGCAGAATATGTGATTGCGGATTNGCTGGAGAGTTTAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTa                                                                                                                                                                                      <  2:201728/273‑1 (MQ=14)                                                                                                                       aCTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGGGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACCCAGCGCTACGCTCCTCGCCCCTCGTGTCGTTGCCTACGGCAACGCTCTCTCGCTGGCGCTCGCATCGACCCTTCGTCGAAGCTGCTCATCCTTCCCCGCATgggacgaacattcaagtg                                                                                                                                                                                  >  2:501396/1‑285 (MQ=14)                                                                                                                       aCTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTg                                                                                                                                                                                  >  1:48573/1‑300 (MQ=255)                                                                                                                       aCTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTACCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGTTCTCTCGCTGGCGCTCGAATCGACCCTTAGTCGAAGTTTCTCATCCTTacccacgagggcagagcacttactcg                                                                                                                                                                                  >  2:330556/1‑278 (MQ=14)                                                                                                                            gcgcTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCACCGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGAt                                                                                                                                                                             >  1:28979/1‑300 (MQ=255)                                                                                                                                             cTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATCTTTGATTGCGGATTCGCTTGATAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCCGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTACGGCAACGCCCTCTCGCTGGCACTCGAGTCGAACACTGGTCGACGCTTCTCATCCTTCGCCGCATGGGTAGAATATTTAATTGCGGATTTGTTTGGGAGTTccgg                                                                                                                                                            >  2:453567/1‑297 (MQ=17)                                                                                                                                                         gCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGGTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTCTGAAAg                                                                                                                                                >  1:803525/1‑300 (MQ=255)                                                                                                                                                               ggCAACGCTCGCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCAGGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGTACTTGTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGAtgg                                                                                                                                          <  2:256330/300‑1 (MQ=255)                                                                                                                                                                                   gCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATGTGTGATTGCGGATTCGCGTGAGAGTTCAGGGATTTTTGGAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGaa                                                                                                                      <  1:529028/300‑1 (MQ=255)                                                                                                                                                                                             aaCCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGCGTCGAACCTTGGTCGACGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTACTTGCGGATTCGTTGTGACGCTCAGGGACTTTTGCAAGTGATGGTGGTGGGGGACGGATTCGAACCTTCGAAGt                                                                                                            >  2:192732/1‑300 (MQ=17)                                                                                                                                                                                              aCCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTAATCCTTCCCCGCATGGGAAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAgcc                                                                                                           >  2:840252/1‑298 (MQ=255)                                                                                                                                                                                               ccTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCCGCGCTGCGCGCCTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTAGTCGACGCTTCTCATCCTTCCCCGAATGAGCAGAGGACTTACCTGCGTATTCGTTAGGAAGTTCAGGGACTTTTGAAAGTGGTGGTGGGGGGGGAAGGATTCGAAccccagaagccg                                                                                                          >  2:235790/1‑290 (MQ=17)                                                                                                                                                                                                           cTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCATGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGAt                                                                                              >  1:20657/1‑300 (MQ=255)                                                                                                                                                                                                            ttCTCATCCTTCCCCGCAGGGGCAGAATATTTGATTGCAGATTCGTTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGAtt                                                                                             <  1:332803/300‑1 (MQ=255)                                                                                                                                                                                                             tctcATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGCTGACGGCAGAttt                                                                                            >  2:678942/1‑300 (MQ=255)                                                                                                                                                                                                                   ccTTCCCCGCATGGTCAGAATATCTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTGGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCNTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACA‑GTc                                                                                     <  1:604503/300‑1 (MQ=255)                                                                                                                                                                                                                   agttacacgtaggggcagcatgtgtGATTGCGGATGCGCGGTAGGGTTCAGGGACTTGGGGAAGTGATGGTGGTTGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACA‑GTc                                                                                     <  1:584219/276‑1 (MQ=18)                                                                                                                                                                                                                      tCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTAATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAAATTTACC‑GTCTGc                                                                                  >  1:198439/1‑300 (MQ=255)                                                                                                                                                                                                                                ggcagaggattcgATTGCGGATTTGGTTGAGAGTTCAGGGACTTTTGAAATTGATGGTGGGGGGGGGAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTGGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACA‑GTCTGCTCCCTTTGGc                                                                        <  2:243914/288‑1 (MQ=18)                                                                                                                                                                                                                                ggCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACA‑GTCTGCTCCCTTTGGc                                                                        <  1:732205/300‑1 (MQ=255)                                                                                                                                                                                                                                             aTTGCTGATTCGCTTTAGAGTTCATGTACTTTTGAAATTGATGGTGGTTGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTNTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTGAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACA‑GTCTGCTCCCTTTGGCCGCTCGGGAAc‑cc                                                          <  1:598986/300‑1 (MQ=255)                                                                                                                                                                                                                                                      tCGCTTGAGAGTTTGGGGATTTTTGAAAGTGATGGTGTTGGGTGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGGCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCAAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATGTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACA‑GTCTGCTCCCTTTGGCCGCTCGGGAAC‑CCCACCAgggg                                                 <  1:23799/300‑1 (MQ=21)                                                                                                                                                                                                                                                      gcgtcgcagggttcgggtatttgcggaagcgATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACA‑GTCTGCTCCCTTTGGCCGCTCGGGAAC‑CCCACCAtggg                                                 <  2:31411/270‑1 (MQ=21)                                                                                                                                                                                                                                                            gagaGTTTCGGGACTTTTGAAAGCGGTGGGGGTGGGGGAAGGATTACTCAGCACTGCGCGCTGCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGTGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACA‑GTCTGCTCCCTTTGGCCGCTCGGGAAC‑CCCACCAGGGGTAATTc                                           <  2:527430/300‑1 (MQ=21)                                                                                                                                                                                                                                                                gTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGTTTCTAATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGCAGTTCAGGGACTTTTGAAAGTGCTGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGAAGGCAGATCTACA‑GTCTGCTCCCTCTGGCCGCTCGGGAAC‑CCCACCAAGGGTGATTCagct                                       >  2:470542/1‑297 (MQ=21)                                                                                                                                                                                                                                                                gTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACA‑GTCTGCTCCCTTTGGCCGCTCGGGAAC‑CCCAACAGGGGGAATTcccat                                       >  2:154296/1‑296 (MQ=255)                                                                                                                                                                                                                                                                             tGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGTTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACA‑GTCTGCTCCCTTTGGCCGCTCGGGAAC‑CCCACCAGGGGTAATTCAAATTTTGAGGTAATGc                          <  1:98084/300‑1 (MQ=255)                                                                                                                                                                                                                                                                                aaGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCACTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGATGGCGCCCGCGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCAGGGGGAGGGTGTTTAATTGTGGATTAGTGGGGAAGTTCANGGATTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGCACCTTCGAAGTCGATGACGGCAGATTTACA‑GTCTGCTCCCTTTGGCAGCTCGGGAAC‑CCCACCAGGGGTGGTTCAAATTTGGCGGTAATgttta                       >  2:212585/1‑296 (MQ=21)                                                                                                                                                                                                                                                                                        gtggtggGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTTGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCACACCCTCGAAGTCCCTGGCGCCAGATTT‑CACGTCCGCCCCCTCTGGCCTCTCGGGAAC‑CCCAACAAAGGTAATTCACCTTTTGAGGTAATGCTTGAGCtggtg               >  1:232302/1‑300 (MQ=17)                                                                                                                                                                                                                                                                                        gtggtggGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACA‑GTCTGCTCCCTTTGGCCGCTCGGGAAC‑CCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGAtggtg               >  1:301171/1‑300 (MQ=255)                                                                                                                                                                                                                                                                                        gtggtggGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTACACGCGTGGGCAGAGTGTTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGCAGGATTCGACCCTTCGAAGTCGATGACGGCAGATTTACA‑GTCTGCTCCCTTTGGCCGCTCGGGAAC‑CCCACCAGGGGTAACTCACCTTTTGAGGTACGGCTTgatgtggtg               >  2:440153/1‑293 (MQ=21)                                                                                                                                                                                                                                                                                              ggggAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATGTAATTGCGGATTCGTTGGGAANTTCAGGGACTTTTGAAAGTGATGGTGNTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACA‑GTCTGCTCCCTTTGGCCGCTCGGGAAC‑CCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTgggg         <  2:598904/300‑1 (MQ=255)                                                                                                                                                                                                                                                                                              ggggAAGGATTACTCAGCGCTACGCACTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCCCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCGTGGGCAGAATATTTAATTGCGGATTCGTTGGGGAGTTCAGGGACTTTGGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACA‑GTCTGCTCCCTTTGGCCGCTCGGGAAC‑CCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTgggg         <  2:47942/300‑1 (MQ=255)                                                                                                                                                                                                                                                                                               gggAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACA‑GTCTGCTCCCTTTGGCCGCTCGGGAAC‑CCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTggggg        >  1:244204/1‑300 (MQ=255)                                                                                                                                                                                                                                                                                                 gAAGGATTACTCAGCGCGTCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCTGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACA‑GTCTGCTCCCTTTGGCCGCTCGGGAAC‑CCCACCAGGGGTAATTCAAATTTTGAGTTAATGCTTGAGATGGTGGTGGGGGaa      <  2:105617/300‑1 (MQ=255)                                                                                                                                                                                                                                                                                                  aaGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGATCGAGTCAGACCTGGGTCGAAGCTTATAATCTTTCCATGCATGGGCAGAATATGTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGCCGATGACGGCAGATTTACA‑GTCCGCTCCCTTTGGCAGCTCGGGAAC‑CCCACTAAAGGTCATTCAAATTTTGAGGCAGTGTTTGCGATGGTGATGGGAGAAg     >  2:190043/1‑300 (MQ=21)                                                                                                                                                                                                                                                                                                    ggATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCTTGGGCAGAGTATTTACNTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTAGCNCCTTCGACGTCACTAACAACAGGTTTCAA‑GTCTGCTGACGTTGGCCGCTCGGGAACACCCAA‑AGAGGTAATTCACATCTTGAGGTAATGCTTGAGATGGTGGTGGGGggagga   >  2:688241/1‑300 (MQ=17)                                                                                                                                                                                                                                                                                                    ggATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTCCGAAGTCGATGACGGCAGATTTACA‑GTCTGCTCCCTTTGGCCGCTCGGGAAC‑CCCAACAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTGGGGGAAGGa   >  1:148191/1‑300 (MQ=255)                                                                                                                                                                                                                                                                                                    ggATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTAATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACA‑GTCTGCTCCCTTTGGCCGCTCGGGAAC‑CCCACCAGGGGTAATTCAAATTTTGAGGTAGTGCTTGAGATGGTGGTGGGGGAAGGa   >  1:113657/1‑300 (MQ=255)                                                                                                                                                                                                                                                                                                     gagtACTCAGCGCTTAGCGCTTCTCCCTTCGGTTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTTGGAAGTTCATGGACTTTTGAAAGTGATGGTGGTGGGGGAAAAATTCGAACCTTCGAAGTCGATGACGGCAGAGTTACA‑GTCTGCTCCCTTTGGCCGCTCGGGAAC‑CCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTGGGGGAAGGat  <  2:231422/297‑1 (MQ=25)                                                                                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                                                                                           GCTCAAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCTTGGGCAGAATATTTGATTGCGGATTCGTTTGAGAATTCCGGGGCTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACA‑GTCTGCTCCCTTTGGCCGCTCGGGAAC‑CCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTGGGGGAAGGAT  >  NC_000913/1286789‑1287380

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.