Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 3,903,015 | 0 | C | A | 26.6% | 122.7 / 23.9 | 64 | G229G (GGG→GGT) | bglB | 6‑phospho‑beta‑glucosidase B |
Reads supporting (aligned to +/- strand): ref base C (19/28); new base A (0/17); total (19/45) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.29e-03 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Rejected as consensus: Frequency below/above cutoff threshold. |
CAGATGCGGATTGGGGATCATATTCAGTATGTTGCCCTGCGCATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATGGCCTGCAACATATCCT‑GTGGCTGGCAGGT‑‑GAGGGGGTAAACCAGCCCACCGAGAAGCATATTGCCGATTTTCGCTTCGGGGAGCAGGCTATGACAGGCTTTAACTGCCCGCGCACTGGCAACCAGTTGATGGTGGATAGCCTGATAAACTTCCGCCTCGCCACTCTCTTCTGCCAGCCCCACGCCCGTGAATGGCGCGTGTAACGACATGTTGATTTCATTAAACGTCAGCCATAACGCCACTTTATGTTGGTAGCGAGTAAAGACCGTGCGGGCGTAATGCTCGAAGTGATCGATGACCGCTCGATTAGCCCAACCGCCGTAGTTTTTCACC > NC_000913/3902718‑3903303 | cAGATGCGGATTGGGGATCATATTCAGTATGTTGCCCTGCGCATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACAGCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATGGCCTGCAACATATCCT‑GTGGCTGGCAGGT‑‑GAGGGGGTAAACCAGccc < 1:123209/300‑1 (MQ=255) gCGGATTGGGGATCATATTCAGTATGTTGCCCTGCGCATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATGGCCTGCAACATATCCT‑GTGGCTGGCAGGT‑‑GAGGGGGTAAACCAGCCCACCga < 1:481347/300‑1 (MQ=255) ggATTGGGGATCATATTCAGTAGGTTGCCCTGCGCATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAATAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATGGCCTGCAACATATCCT‑GTGGCTGGCAGGT‑‑GAGGGGGTAAACCAGCCCACCgaga < 1:440622/300‑1 (MQ=255) gtggATCATATTCAGTATGTTGCCCTGCGCATTTTTATTAATGCTTTCGTCGTTGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATGGCCTGCAACATATCCT‑GTGGCTGGCAGGT‑‑GGGGGGGGGAACGAGACCACCGAGAAGCat < 2:104650/298‑1 (MQ=255) ggATCATATTCAGTATGTTGCCCTGCGCATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATGGCCTGCAACATATCCT‑GTGGCTGGCAGGT‑‑GAGGGGGTAAACCAGCCCACCGAGAAGCatat > 1:549597/1‑300 (MQ=255) atTCAGTATGTTGCCCTGCGCATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATGGCCTGCAACATATCCT‑GTGGCTGGCAGGT‑‑GAGGGGGTAAACCAGCCCACCGAGAAGCATATTGCCGAt > 1:474002/1‑300 (MQ=255) agttttATTAATGCGTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTTCGTCACTTTCATTCATCTCAATGGTGATATTGTGTTCGCGGAAGAAACGCTGCATATAGNCGGGATACTGGCCACGCGCCTGAACANCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATGGCCTGCAACATATCCT‑GTTGCTGGCAGGT‑‑TATGGGGTGAATCAGACCACCGAGAAGCATATTGCCGATTTTCGCTTCGGGGAGCAGGCt < 2:576673/298‑1 (MQ=255) aTTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACANCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATGGCCTGCAACATATCCC‑GTGGCTGGCAGGT‑‑GATGGGGGAAACCAGACCACCGAGAAGCNTATTGCCGATTTTCGCTTCGGGGAGCAGGCt < 2:615985/300‑1 (MQ=255) tcttaATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAATAGACGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATGGCCTGCAACATATCCT‑GTGGCTGGCAGGT‑‑GAGGGGGTAAACCAGCCCACCGAGAAGCATATTGCCGATTTTCGCTTCGGGGAGCAGGCTATGAc < 1:404100/298‑1 (MQ=255) tattaATGCTTTCGGCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCACGGCCTGCAACATATCCT‑GTGGCTGCCAGGT‑‑GGGGGGGGGAATGAGACCACCGAGAAGCATATTGCCGATTTTCGCTTCGGGGAGCAGGCTATGAc < 2:447606/300‑1 (MQ=255) aaTGCTTTCGTCGTGGTAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCATTCATCTCAATGGTGATATTGTGGTCGCGTAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATGGCCTGCAACATATCCT‑TTGGCTGGCATGT‑‑GGGGGGGGAAACCAGACCACCGAGAAGCATATTGCCGATTTTCGCTTCGGGGAGCAGGCTATGACAGGc < 2:9368/300‑1 (MQ=255) aaTGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATGGCCTGCAACATATCCT‑GTGGCTGGCAGGT‑‑GAGGGGGTAAACCAGCCCACCGAGAAGCATATTGCCGATTTTCGCTTCGGGGAGCAGGCTATGACAGGc < 1:439264/300‑1 (MQ=255) ttcctcgtGGGAAACACAACCAGTCATTTAATAACTAAAATAACTGAAATCGACGGTATGTTTTAAATCTTCTGCTTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAATAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCATCGCCGGTTCTCTTCCATGGCCTGCAACCTATCCT‑GTGTCCGGCAGGT‑‑GATGAGGGGAATGAGACCACCGAGAAGCATATTGCCGATTTTCGCTTCGGGGAGCAGGCTATGACAGGCTTTAAc < 2:342632/296‑1 (MQ=255) ttCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAATAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATGGCCTGCAACATATCCT‑GTGGCTGGCAGGT‑‑GAGGGGGGAAACCAGACCACCGAGAAGCATATTGCCGATTTTCGCTTCGGGGAGCAGGCTATGACAGGCTTTAAc < 2:271093/300‑1 (MQ=255) ttCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATGGCCTGCAACATATCCT‑GTGGCTGGCAGGT‑‑GAGGGGGTAAACCAGCCCACCGAGAAGCATATTGCCGATTTTCGCTTCGGGGAGCAGGCTATGACAGGCTTTAAc < 1:414997/300‑1 (MQ=255) ttCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTCCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATTGCCTGCAACATATCCT‑GTGGCTTGCAGGT‑‑GATGGGGGAAACCAGACCACCGAGAAGCATATTGCCGATTTTCGCTTCGGGGAGCAGGCTATGACAGGCTTTAAc < 2:731621/300‑1 (MQ=255) ttCGTCGTGGGAAACACAACCAGTCAGTTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCTTCACTTTCAGTCATCTCAATTGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCACCTGAACATCACCAAAGAACATCCAGCGCCATTTCTCTTCCATGGCCTGCAACACATCCTTCTTCCTG‑CAGTTTGGAAGGGG‑‑AACCAGACCACCGAGAAGCATATTGCCGATTTTCGCTTCGGGGAGCAGGCTATGACAGGCTTTAAc < 2:164783/300‑1 (MQ=255) ttCGGCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGGAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATGGCCTGCAACATATCCT‑GTTGCTTGCAGGT‑‑TATGGGGGAAACCAGACCACCGAGAAGCATATTGCCGATTTTCGCTTCGGGGAGCAGGCTATGACAGGCTTTAAc < 2:49105/300‑1 (MQ=255) gtGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATGGCCTGCAACATATCCT‑GTGGCTGGCAGGT‑‑GAGGGGGTAAACCAGCCCACCGAGAAGCATATTGCCGATTTTCGCTTCGGGGAGCAGGCTATGACAGGCTTTAACTGCCcg > 1:341065/1‑300 (MQ=255) aGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATGGCCTGCAACATATCCT‑GTGGCTGGCAGGT‑‑GAGGGGGTAAACCAGCCCACCGAGAAGCATATTGCCGATTTTCGCTTCGGGGAGCAGGCTATGACAGGCTTTAACTGCCCGCGCACTGGCAACCAg < 1:521605/300‑1 (MQ=255) aataaCTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATTGCCTGCAACATATCCT‑GTGGCTGGCAGGT‑‑GAGGGGGTAAACCAGCCCACCGAGAAGCATATTGCCGATTTTCGCTTCGGGGAGCAGGCTATGACAGGCTTTAACTGCCCGCGCACTGGCAACCAGTTGAtggt < 2:507005/300‑1 (MQ=255) aCTAAAATAGATGGAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCATTCATCTCAATGTTGATATTGTGGTCGCGGAATAAACGCTGCATATAGCCTGGATACTGGCCACGCGCCTGAACATCACCAAAGACCCTCCAGCGCCGTTTCTCTTCCATGTCCTGCACCATATCCT‑TTTTCTTCCAGTT‑‑TATGGTGGGAACCAGACCACCGAGAAGCATATTGCCGATTTTCGCTTCGGGGAGCAGGCTATGACAGGCTTTAACTGCCCGCGCACTGGCAACCAGTTGATGGTGGAt < 2:399459/300‑1 (MQ=255) aCTAAAATAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATGGCCTGCAACATANCCT‑GTGGCTGGCAGGT‑‑GAGGGGGTAAACCAGACCACCGAGAAGCATATTGCCGATTTTCGCTTCGGGGAGCAGGCTATGACAGGCTTTAACTNCCCGCGCACTGGCAACCAGTTGATGGTGGAt < 2:615791/300‑1 (MQ=255) aCTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATTGCCTGCAACATANCCT‑GTGGCTGGCAGGT‑‑GATGGGGTAAACCAGCCCACCGAGAAGCATATTGCCGATTTTCGCTTCGGGGAGCAGGCTATGACAGGCTTTAACTNCCCGCGCACTGGCAACCAGTTGATGGTGGAt < 2:622420/300‑1 (MQ=255) aCTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATGGCCTGCAACATATCCT‑GTGGCTGGCAGGT‑‑GAGGGGGGAAACTAGACCACCGAGAAGCATATTGCCGATTTTCGCTTCGGGGAGCAGGCTATGACAGGCTTTAACTGCCCGCGCACTGGCAACCAGTTGATGGTGGAt < 2:804521/300‑1 (MQ=255) gTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATGGCCTGCAACATATCCT‑GTGGCTGGCAGGT‑‑GAGGGGGTAAACCAGCCCACCGAGAAGCATATTGCCGATTTTCGCTTCGGGGAGCAGGCTATGACAGGCTTTAACTGCCCGCGCACTGGCAACCAGTTGATGGTGGATAGCCTGATAAACTTCCGCCTCGCCAc > 1:32363/1‑300 (MQ=255) aaaTCTTCTGCGTCACTTTCAGTCACCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTTGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATGGCCTGCAACATATCCT‑GTTGCCGGCAGTT‑‑GAGGGGGGGAACCAGCCCACCGAGAAGCATATTGCCGATTTTCGCTTCGGGGAGCAGGCTATGACAGGCTTTAACTGCCCGCGCACTGGCAACCAGTTGATGGTGGATAGCCTGATAAACTTCCGCCTCGCCActctct < 2:557895/300‑1 (MQ=255) aTCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAANCGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATGGCCTGCAACATATCCT‑GTGGCTGGCAGGT‑‑GAGGGGGTAAACCAGCCCACCGAGAAGCATATTGCCGATTTTCGCTTCGGGGAGCAGGCTATGACAGGCTTTAACTGCCCGCGCNCTGGCAACCAGTTGATGGTGGATAGCCTGATAAACTTCCGCCTCGCCACTCtcttc < 2:788509/300‑1 (MQ=255) aTCTCCTGCTTCACTTTCATTCATCTCAATTGTGATATTGTTGTCGCGGAAGAAACGCTACATATAGCCGGGATACTGTCCACGCGCCTGAACATCACCAACGAACATCCATCGCCTTTTCTCTTCCATGTCCTGCAACATATCCT‑GTGTCTGGCAGGT‑‑GAGGGTGGAAACCAGACCACCGAGAAGCATATTGCCGATTTTCGCTTCGGGGAGCAGGCTATGACAGGCTTTAACTGCCCGCGCACTGGCAACCAGTTGATGGTGGATAGCCTGATAAACTTCCGCCTCGCCACTCtcttc < 2:817502/300‑1 (MQ=255) ttctGCGGCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATGGCCTGCAACATATCCT‑GTGGCTGGCAGTT‑‑GATGGGGTAAACCAGCCCACCGAGAAGCATATTGCCGATTTTCGCTTCGGGGAGCAGGCTATGACAGGCTTTAACTGCCCGCGCACTGGCAACCAGTTGATGGTGGATAGCCTGATAAACTTCCGCCTCGCCACTCTCTTCTGc < 2:63730/300‑1 (MQ=255) ctGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATGGCCTGCAACATATCCT‑GTGGCTGGCAGGT‑‑GAGGGGGTAAACCAGCCCACCGAGAAGCATATTGCCGATTTTCGCTTCGGGGAGCAGGCTATGACAGGCTTTAACTGCCCGCGCACTGGCAACCAGTTGATGGTGGATAGCCTGATAAACTTCCGCCTCGCCACTCTCTTCTGCCa < 1:422680/300‑1 (MQ=255) tGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGAATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATTGCCTGCAACATATCCT‑TTTTCTTTCAGTT‑‑TCTGGGGGAAACCAGCCCACCTAGAAGCATATTGCCGATTTTCGCTTCGGGGAGCAGGCTATGACAGGCTTTAACTGCCCGCGCACTGGCAACCAGTTGATGGTGGATAGCCTGATAAACTTCCGCCTCGCCACTCTCTTCTGCCAg < 2:363925/300‑1 (MQ=255) aCTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATGGCCTGCAACATATCCT‑GTGGCTGGCAGGT‑‑GAGGGGGTAAACCAGCCCACCGAGAAGCATATTGCCGATTTTCGCTTCGGGGAGCAGGCTATGACAGGCTTTAACTGCCCGCGCACTGGCAACCAGTTGATGGTGGATAGCCTGATAAACTTCCGCCTCGCCACTCTCTTCTGCCAGCCCCAc > 1:547080/1‑300 (MQ=255) cTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATGGCCTGCAACATATCCT‑GTGGCTGGCAGGT‑‑GAGGGGGTAAACCAGCCCACCGAGAAGCATATTGCCGATTTTCGCTTCGGGGAGCAGGCTATGACAGGCTTTAACTGCCCGCGCACTGGCAACCAGTTGATGGTGGATAGCCTGATAAACTTCCGCCTCGCCACTCTCTTCTGCCAGCCCCACg > 1:386220/1‑300 (MQ=255) tCATCTNAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATNCTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATGGCCTGCAACATATCCT‑GTGGCTGGCAGGT‑‑GATGGGGTAAACCAGCCCACCGAGAAGCATATTGCCGATTTTCGCTTCGGGGAGCAGGCTATGACAGGCTTTAACTGCCCGCGCACTGGCAACCAGTTGATGGTGGATAGCCTGATAAACTTCCGCCTCGCCACTCTCTTCTGCCAGCCCCACGCCCGTGa < 2:700340/300‑1 (MQ=255) cATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATGGCCTGCAACATATCCT‑GTGGCTGGCAGGT‑‑GAGGGGGTAAACCAGCCCACCGAGAAGCATATTGCCGATTTTCGCTTCGGGGAGCANGCTATGACAGGTTTTAACTGCCCGCGCACTGGCAACCAGTTGATGGTGGATAGCCTGATACACTTCCGCCCCGCCACTCTCTTCTGCCAGCCCCACGCCCGTGaa > 2:737759/1‑300 (MQ=255) aTCTCAATGTTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATGGCCTGCAACATATCCT‑GTGGCTGGCAGGT‑‑GATGGGGTAAACCAGCCCACCGAGAAGCATATTGCCGATTTTCGCTTCGGGGAGCAGGCTATGACAGGCTTTAACTGCCCGCGCACTGGCAACCAGTTGATGGTGGATAGCCTGATAAACTTCCGCCTCGCCACTCTCTTCTGCCAGCCCCACGCCCGTGAAt < 2:717335/300‑1 (MQ=255) aTCTCAATGGTGATATTGTGGTCGCGTAGGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAGCATCCAGCGCCTGTTCTCTTCCATGGCCTGCAACATATCCT‑GTTGCTGGNAGGT‑‑GATGGGGTAAACCAGCCCACCGAGAAGCATATTGCCGATTTTCGCTTCGGGGAGCAGGCTATGACAGGCTTTAACTGCCCGCGCACTGGCAACCAGTTGATGGTGGATAGCCTGATAAACTTCCGCCTCGCCACTCTCTTCTGCCAGCCCCACGCCCGTGAAt < 2:192654/300‑1 (MQ=255) aTCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATGGCCTGCAACATATCCT‑GTGGCTGGCAGGT‑‑GAGGGGGTAAACCAGCCCACCGAGAAGCATATTGCCGATTTTCGCTTCGGGGAGCAGGCTATGACAGGCTTTAACTGCCCGCGCACTGGCAACCAGTTGATGGTGGATAGCCTGATAAACTTCCGCCTCGCCACTCTCTTCTGCCAGCCCCACGCCCGTGAAt < 1:678187/300‑1 (MQ=255) tctcAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATGGCCTGCAACATATCCT‑GTGGCTGGCAGGT‑‑GAGGGGGTAAACCAGCCCACCGAGAAGCATATTGCCGATTTTCGCTTCGGGGAGTAGGCTATGACAGGCTTTAACTGCCCGCGCACTGGCAACCAGTTGATGGTGGATAGCCTGATAAACTTCCGCCTCGCCACTCTCTTCTGCCAGCCCCACGCCCGTGAATg > 1:154818/1‑300 (MQ=255) tctcAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATGGCCTGCAACATATCCT‑GTGGCTGGCAGGT‑‑GAGGGGGTAAACCAGCCCACCGAGAAGCATATTGCCGATTTTCGCTTCGGGGAGCAGGCTATGACAGGCTTTAACTGCCCGCGCACTGGCAACCAGTTGATGGTGGATAGCCTGATAAACTTCCGCCTCGCCACTCTCTTCTGCCAGCCCCACGCCCGTGAATg > 1:310062/1‑300 (MQ=255) tctcAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATGGCCTGCAACATATCCT‑GTGGCTGGCAGGT‑‑GAGGGGGTAAACCAGCCCACCGAGAAGCATATTGCCGATTTTCGCTTCGGGGAGCAGGCTATGACAGGCTTTAACTGCCCGCGCACTGGCAAACAGTTGATGGTGGATAGCCTGATAAACTTCCGCCTCGCCACTCTCTTCTGCCAGCCCCACGCCCGTGAATg > 1:26151/1‑300 (MQ=255) gTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATGGCCTGCAACATATCCT‑GTGGCTGGCAGGT‑‑GAGGGGGTAAACCAGCCCACCGAGAAGCATATTGCCGATTTTCGCTTCGGGGAGCAGGCTATGACAGGCTTTAACTGCCCGCGCACTGGCAACCAGTTGATGGTGGATAGCCTGATAAACTTCCGCCTCGCCACTCTCTTCTGCCAGCCCCACGCCCGTGAATGGCGCgtgt > 1:670648/1‑300 (MQ=255) gATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACCCCCAGCGCCGGTTCTCTTCCATGGCCTGCAACATACCCT‑GTTGCTGGCATGT‑‑GAGGGGGAAAACCAGACCACCGAGAAGCATATTGCCGATTTTCGCTTCGGGGAGCAGGCTATGACAGGCTTTAACTGCCCGCGCACTGGCAACCAGTTGATGGTGGATAGCCTGATAAACTTCCGCCTCGCCACTCTCTTCTGCCAGCCCCACGCCCGTGAATGGCGCGTGTaa < 2:329478/300‑1 (MQ=255) tCGCGGAAGAAACTCTGCATATAGCCTGGACACTGTCCACACGCCTGAACACCACCAAAGACCACCCAGCGCCTGTTCTCTTCCATGTCCTTCAACATACCCT‑TTCTCTGTCAGTT‑‑TATGGGGTAACCCAGCCCACCGAGAAGCATATTGCCGATTTTCGCTTCTGGGAGCAGGCTATGACAGGCTTTAACTGCCCGCGCACTGGCAACCAGTTGATGGTGGATAGCCTGATAAACTTCCGCCTCGCCACTCTCTTCTGCCAGCCCCACGCCCGTGAATGGCGCGTGTAACGACATGTTg < 2:344862/300‑1 (MQ=255) taaaCGCTGCATATAGCCGGGATACGGACCACGCGCCTAAACATCACCAAAAAACATCCAGCGCCAGTTCTCTTCCATTGCCTGCAACATATCCT‑GTTGCTTACAGGT‑‑GATGGGGTAAACCAGACCACCGAGAAGCATATTGCCGATTTTCGCTTCGGGGAGCAGGCTATGACAGGCTTTAACTGCCCGCGCACTGGCAACCAGTTGATGGTGGATAGCCTGATAAACTTCCGCCTCGCCACTCTCTTCTGCCAGCCCCACGCCCGTGAATGGCGCGTGTAACGACATGTTGATTTCAtt < 2:417556/299‑1 (MQ=255) gCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATGGCCTGCAACATATCCT‑GTGGCTGGCAGGT‑‑GAGGGGGTAAACCAGCCCACCGAGAAGCATATTGCCGATTTTCGCTTCGGGGAGCAGGCTATGACAGGCTTTAACTGCCCGCGCACTGGCAACCAGTTGATGGTGGATAGCCTGATAAACTTCCGCCTCGCCACTCTCTTCTGCCAGCCCCACGCCCGTGAATGGCGCGTGTAACGACATGTTGATTTCATTAAACGTCa > 1:765141/1‑300 (MQ=255) gCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATGGCCTGCAACATATCCT‑GTGGCTGGCAGGT‑‑GAGGGGGTAAACCAGCCCACCGAGAAGCATATTGCCGATTTTCGCTTCGGGGAGCAGGCTATGACAGGCTTTAACTGCCCGCGCACTGGCAACCAGTTGATGGTGGATAGCCTGATAAACTTCCGCCTCGCCACTCTCTTCTGCCAGCCCCACGCCCGTGAATGGCGCGTGTAACGACATGTTGATTTCATTAAACGTCAGCCATaa > 1:105019/1‑300 (MQ=255) aTACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATGGCCTGCAACATATCCT‑GTGGCTGGCAGGT‑‑GAGGGGGTAAACCAGCCCACCGAGAAGCATATTGCCGATTTTCGCTTCGGGGAGCAGGCTATGACAGGCTTTAACTGCCCGCGCACTGGCAACCAGTTGATGGTGGATAGCCTGATAAACTTCCGCCTCGCCACTCTCTTCTGCCAGCCCCACGCCCGTGAATGGCGCGTGTAACGACATGTTGATTTCATTAAACGTCAGCCATAACGCCaa > 1:20766/1‑299 (MQ=255) aTACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATGGCCTGCAACATATCCT‑GTGGCTGGCAGGT‑‑GAGGGGGTAAACCAGCCCACCGAGAAGCATATTGCCGATTTTCGCTTCGGGGAGCAGGCTATGACAGGCTTTAACTGCCCGCGCACTGGCAACCAGTTGATGGTGGATAGCCTGATAAACTTCCGCCTCGCCACTCTCTTCTGCCAGCCCCACGCCCGTGAATGGCGCGTGTAACGACATGTTGATTTCATTAAACGTCAGCCATAACGCCAc > 1:19812/1‑300 (MQ=255) cgcCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATGGCCTGCAACATATCCT‑GTGGCTGGCAGGT‑‑GAGGGGGTAAACCAGCCCACCGAGAAGCATATTGCCGATTTTCGCTTCGGGGAGCAGGCTATGACAGGCTTTAACTGCCCGCGCACTGGCAACCAGTTGATGGTGGATAGCCTGATAAACTTCCGCCTCGCCACTCTCTTCTGCCAGCCCCACGCCCGTGAATGGCGCGTGTAACGACATGTTGATTTCATTAAACGTCAGCCATAACGCCACTTTATGTTGGTa > 1:463885/1‑300 (MQ=255) cATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATGGCCTGCAACATATCCT‑GTGGCTGGCAGGT‑‑GAGGGGGTAAACCAGCCCACCGAGAAGCATATTGCCGATTTTCGCTTCGGGGAGCAGGCTATGACAGGCTTTAACTGCCCGCGCACTGGCAACCAGTTGATGGTGGATAGCCTGATAAACTTCCGCCTCGCCACTCTCTTCTGCCAGCCCCACGCCCGTGAATGGCGCGTGTAACGACATGTTGATTTCATTAAACGTCAGCCATAACGCCACTTTATGTTGGTAGCGAGTaa > 1:501883/1‑300 (MQ=255) aCCAAATAACATCCAGCGCCGGTTCTCTTCCATTGCCTTCCACATATCCT‑GTGGCTTGCAGTT‑‑GAGGGGGTAAACCAGCCCACCGAGAAGCATATTGCCGATTTTCGCTTCGGGGAGCAGGCTATGACAGGCTTTAACTGCCCGCGCACTGGCAACCAGTTGATGGTGGATAGCCTGATAAACTTCCGCCTCGCCACTCTCTTCTGCCAGCCCCACGCCCGTGAATGGCGCGTGTAACGACATGTTGATTTCATTAAACGTCAGCCATAACGCCACTTTATGTTGGTAGCGAGTAAAGAc < 2:730104/300‑1 (MQ=255) aCCAAAGAACATCCAGCGCCGGTTCTCTTCCATTGCCTGCAACATATCCT‑GTGGCTTGCAGGT‑‑GAGGGGGTAAACCAGCCCACCGAGAAGCATATTGCCGATTTTCGCTTCGGNGAGCAGGCTATGACAGGCTTTAACTGCCCGCGCACTGGCAACCAGTTGATGGTGGATAGCCNGATAAACTTCCGCCTCGCCACTCTCTTCTGCCAGCCCCACGCCCGTGAATGGCGCGTGTAACGACATGTTGATTTCATTAAACGTCAGCCATAACGCCACTTTATGTTGGTAGCGAGTAAAGAc < 2:685844/300‑1 (MQ=255) aCCAAAGAACATCCAGCGCCGGTTCTCTTCCATGGCCTGCAACATATCCT‑GTGGCTTGCAGGT‑‑GAGGGGGTAAACCAGCCCACCGAGAGGCATATTGCCGATTTTCGCTTCGGGGAGCAGGCTATGACAGGCTTTAACTGCCCGCGCACTGGCAACCAGTTGATGGTGGATAGCCTGATAAACTTCCGCCTCGCCACTCTCTTCTGCCAGCCCCACGCCCGTGAATGGCGCGTGTAACGACATGTTGATTTCATTAAACGTCAGCCATAACGCCACTTTATGTTGGTAGCGAGTAAAGAc < 2:521705/300‑1 (MQ=255) aCCAAAGAACATCCAGCGCCGGTTCTCTTCCATGGCCTGCAACATATCCT‑GTGGCTGGCAGGT‑‑TAGGGGGTAAACCAGACCACCGAGAAGCATATTGCCGATTTTCGCTTCGGGGAGCAGGCTATGACAGGCTTTAACTGCCCGCGCACTGGCAACCAGTTGATGGTGGATAGCCTGATAAACTTCCGCCTCGCCACTCTCTTCTGCCAGCCCCACGCCCGTGAATGGCGCGTGTAACGACATGTTGATTTCATTAAACGTCAGCCATAACGCCACTTTATGTTGGTAGCGAGTAAAGAc < 2:33409/300‑1 (MQ=255) aCCAAAGAACATCCAGCGCCGGTTCTCTTCCATGGCCTGCAACATATCCT‑GTGGCTGGCAGGT‑‑GAGGGGGTAAACCAGCCCACCGAGAAGCATATTGCCGATTTTNGCTTCGGGGAGCAGGCTATGACAGGCTTTAACTGCCCGCGCACTGGCAACCAGTTGATGGTGGATAGCCTGATAAACTTCCGCCTCGCCACTCTCTTCTGCCAGCCCCACGCCCGTGAATGGCGCGTGTAACGACATGTTGATTTCATTAAACGTCAGCCATAACGCCACTTTATGTTGGTAGCGAGTAAAGAc < 2:752102/300‑1 (MQ=255) aCCAAAGAACATCCAGCGCCGGTTCTCTTCCATGGCCTGCAACATATCCT‑GTGGCTGGCAGGT‑‑GAGGGGGGAAACCAGCCCACCGAGAAGCATATTGCCGATTTTCGCTTCGGGGAGCAGGCTATGACAGGCTTTAACTGCCCGCGCACTGGCAACCAGTTGATGGTGGATAGCCTGATAAACTTCCGCCTCGCCACTCTCTTCTGCCAGCCCCACGCCCGTGAATGGCGCGTGTAACGACATGTTGATTTCATTAAACGTCAGCCATAACGCCACTTTATGTTGGTAGCGAGTAAAGAc < 2:656945/300‑1 (MQ=255) gcgcCGGTTCTCTTCCATGGCCTGCAACATATCCT‑GTGGCTGGCAGGT‑‑GAGGGGGTAAACCAGCCCACCGAGAAGCATATTGCCGATTTTCGCTTCGGGGAGCAGGCTATGACAGGCTTTAACTGCCCGCGCACTGGCAACCAGTTGATGGTGGATAGCCTGATAAACTTCCGCCTCGCCACTCTCTTCTGCCAGCCCCACGCCCGTGAATGGCGCGTGTAACGACATGTTGATTTCATTAAACGTCAGCCATAACGCCACTTTATGTTGGTAGCGAGTAAAGACCGTGCGGGCGTAATg < 1:860429/300‑1 (MQ=255) tgCCTGCAACATACCCT‑GTGGCTTGCAGTT‑‑GAGGGGTTAAACCAGCCCACCGAGAAGCATATTGCCGATTTTCGCTTCGGGGAGCAGGCTATGACAGGCTTTAACTGCCCGCGCACTGGCAACCAGTTGATGGTGGATAGCCTGATAAACTTCCGCCTCGCCACTCTCTTCTGCCAGCCCCACGCCCGTGAATGGCGCGTGTAACGACATGTTGATTTCATTAAACGTCAGCCATAACGCCACTTTATGTTGGTAGCGAGTAAAGACCGTGCGGGCGTAATGCTCGAAGTGATCGATGAc < 2:51386/299‑1 (MQ=255) ggCCTGCAACATATCCT‑GTGGCTGGCAGGT‑‑GAGGGGGGAAACCAGCCCACCGAGAAGCATATTGCCGATTTTCGCTTCGGGGAGCAGGCTATGACAGGCTTTAACTGCCCGCGCACTGGCAACCAGTTGATGGTGGATAGCCTGATAANCTTCCGCCTCGCCACTCTCTTCTGCCNGCCCCACGCCCGTGAATGGCGCGTGTAACGACATGTTGATTTCATTAAACGTCAGCCATAACGCCACTTTATGTTGGTAGCGAGTAAAGACCGTGCGGGCGTAATGCTCGAAGTGATCGATGAc < 2:584446/300‑1 (MQ=255) ggCCTGCAACATACCCT‑GTGGCTGGCAGGT‑‑GAGGGGGGAAACCAGCCCACCGAGAAGCATATTGCCGATTTTCGCTTCGGGGAGCAGGCTATGACAGGCTTTAACTGCCCGCGCACTGGCAACCAGTTGATGGTGGATAGCCTGATAAACTTCCGCCTCGCCACTCTCTTCTGCCAGCCCCACGCCCGTGAATGGCGCGTGTAACGACATGTTGATTTCATTAAACGTCAGCCATAACGCCACTTTATGTTGGTAGCGAGTAAAGACCGTGCGGGCGTAATGCTCGAAGTGATCGATGAc < 2:655061/300‑1 (MQ=255) ttcAACATATCCT‑GTTGCTTGCATGT‑‑TAGTGGGTAAACCAGCCCACCGAGAAGCATATTGCCGATTTTCGCTTCGGGGAGCAGGCTATGACAGGCTTTAACTGCCCGCGCACTGGCAACCAGTTGATGGTGGATAGCCTGATAAACTTCCGCCTCGCCACTCTCTTCTGCCAGCCCCACGCCCGTGAATGGCGCGTGTAACGACATGTTGATTTCATTAAACGTCAGCCATAACGCCACTTTATGTTGGTAGCGAGTAAAGACCGTGCGGGCGTAATGCTCGAAGTGATCGATGACCGCt < 2:65747/298‑1 (MQ=255) aCATATCCT‑GTGGCTGGCAGGT‑‑GAGGGGGTAAACCAGCCCACCGAGAAGCATATTGCCGATTTTCGCTTCGGGGAGCAGGCTATGACAGGCTTTAACTGCCCGCGCACTGGCAACCAGTTGATGGTGGATAGCCTGATAAACTTCCGCCTCGCCACTCTCTTCTGCCAGCCCCACGCCCGTGAATGGCGCGTGTAACGACATGTTGATTTCATTAAACGTCAGCCATAACGCCACTTTATGTTGGTAGCGAGTAAAGACCGTGCGGGCGTAATGCTCGAAGTGATCGATGACCGCTCGAt > 1:488438/1‑300 (MQ=255) gggTAAACCAGCCCACCGAGAAGCATATTGCCGATTTTCGCTTCGGGGAGCAGGCTATGACAGGCTTTAACTGCCCGCGCACTGGCAACCAGTTGATGGTGGATAGCCTGATAAACTTCCGCCTCGCCACTCTCTTCTGCCAGCCCCACGCCCGTGAATGGCGCGTGTAACGACATGTTGATTTCATTAAACGTCAGCCATAACGCCACTTTATGTTGGTAGCGAGTAAAGACCGTGCGGGCGTAATGCTCGAAGTGATCGATGACCGCTCGATTAGCCCAACCGCCGTAGTTTTTCAcc > 1:329029/1‑300 (MQ=255) | CAGATGCGGATTGGGGATCATATTCAGTATGTTGCCCTGCGCATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATGGCCTGCAACATATCCT‑GTGGCTGGCAGGT‑‑GAGGGGGTAAACCAGCCCACCGAGAAGCATATTGCCGATTTTCGCTTCGGGGAGCAGGCTATGACAGGCTTTAACTGCCCGCGCACTGGCAACCAGTTGATGGTGGATAGCCTGATAAACTTCCGCCTCGCCACTCTCTTCTGCCAGCCCCACGCCCGTGAATGGCGCGTGTAACGACATGTTGATTTCATTAAACGTCAGCCATAACGCCACTTTATGTTGGTAGCGAGTAAAGACCGTGCGGGCGTAATGCTCGAAGTGATCGATGACCGCTCGATTAGCCCAACCGCCGTAGTTTTTCACC > NC_000913/3902718‑3903303 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |