| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 405,638 | T→C | K3E (AAG→GAG) | proC ← | pyrroline‑5‑carboxylate reductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 405,638 | 0 | T | C | 96.8% | 213.4 / NA | 62 | K3E (AAG→GAG) | proC | pyrroline‑5‑carboxylate reductase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (30/30); minor base A (2/0); total (32/30) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.92e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CCTGCAGCAATAGAAACGACCAGAGAGTCTTTATTCAGGCTGGAGGTGATTTCGCTAAGCACTTTAATCATGATGCCAGGTTTAACGGCAGCAAAAATGATGTCGGCGATTTGCGCCACTTCTTGCGCCGATTCTGCGGCGTTGATGCCGAACTGGTCATGCAGGGCGGCGACTTTATCCGGGGAGGGGGTGTATACCCAGATTTGCCCTGGAAGCACCTGACCGCTGGCAATCAGACCGCCGAGAATGGCTTTTCCCATATTGCCGCAGCCAATAAAACCGATTTTCTTTTCCATTGCCTCACTCCTGCCGTGAAATTCATTGTTTTGATAATCGCTGGCAGAAGCATAAACAGAACTATGCCGGAAGGCAAAAGCGCGACACAATAGAGGATTACCCAACAAAGGATGACTTTATGACAATTTGGGTGGATGCCGACGCGTGTCCCAATGTAATTAAAGAGATTTTGTATCGCGCGGCGGAACGTATGCAGATGCCGCTGGTACTGGTAGCAAACCAGAGTTTACGCGTGCCGCCATCGCGATTTATTCGTACGCTGCGCGTCGCGGCA > NC_000913/405349‑405919 | ccTGCAGCAATAGAAACGACCAGAGAGTCTTTATTCAGGCTGTAGGTGATTTCGCTAAGCACTTTAATCATGATGCCAGGTTTAACGGCAGCAAAAATGATGTCGGCGATTTGCGCCACTTCTTGCGCCGATTCTGCGGCGTTGATGCCGAACTGGTCATGCAGGGCGGCGACTTTATCCGGGGAGGGGGTGTATACCCAGATTTGCCCTGGAAGCACCTGACCGCTGGCAATCAGACCGCCGAGAATGGCTTTTCCCATATTGCCGCAGCCAATAAAACCGATTTTCTCTTCCATTGcc < 1:160861/300‑1 (MQ=255) gcaATATAAACGACCAGAGAGTCTTTATTCAGGCTGGAGTTGATTTCGCTAAGCACTTTAATCATGATGCCAGGTTTAACGGCAGCAAAAATGATGTCGGCGATTTGCGCCACTTCTTGCGCCGATTCTGCGGCGTTGATGCCGAACTGGTCATGCAGGGCGGCGACTTTATCCGGGGAGGGGGTGTATACCCAGATTTGCCCTGGAAGCACCTGACCGCTGGCAATCAGACCGCCGAGAATGGCTTTTCCCATATTGCCGCAGCCAATAAAACCGATTTTCTCTTCCATTGCCTCACTc < 2:609522/300‑1 (MQ=255) aTAGAAACGACCAGAGAGTCTTTATTCAGGCTGGAGGTGATTTCGCTAAGCACTTTAATCATGATGCCAGGTTTAACGGCAGCAAAAATGATGTCGGCGATTTGCGCCACTTCTTGCGCCGATTCTGCGGCGTTGATGCCGAACTGGTCATGCAGGGCGGCGACTTTATCCGGGGAGGGGGTGTATACCCAGATTTGCCCTGGAAGCACCTGACCGCTGGCAATCAGACCGCCGAGAATGGCTTTTCCCATATTGCCGCAGCCAATAAAACCGATTTTCTCTTCCATTGCCTCACTCCTg > 1:563868/1‑300 (MQ=255) tAGAAACGACCAGAGAGTCTTTATTCAGGCTGTAGGTGATTTCGCTAAGCACTTTAATCATGATGCCAGGTTTAACGGCAGCAAAAATGATGTCGGCGATTTGCGCCACTTCTTGCGCCGATTCTGCGGCGTTGATGCCGAACTGGTCATGCAGGGCGGCGACTTTATCCGGGGAGGGGGTGTATACCCAGATTTGCCCTGGAAGCACCTGACCGCTGGCAATCAGACCGCCGAGAATGGCTTTTCCCATATTGCCGCAGCCAATAAAACCGATTTTCTCTTCCATTGCCTCACTCCTGc < 1:191883/300‑1 (MQ=255) gAAACGACCAGAGAGTCTTTATTCAGGCTGTAGGTGATTTCGCTAAGCACTTTAATCATGATGCCAGGTTTAACGGCAGCAAAAATGATGTCGGCGATTTGCGCCACTTCTTGCGCCGATTCTGCGGCGTTGATGCCGAACTGGTCATGCAGGGCGGCGACTTTATCCGGGGAGGGGGTGTATACCCAGATTTGCCCTGGAAGCACCTGACCGCTGGCAATCAGACCGCCGAGAATGGCTTTTCCCATATTGCCGCAGCCAATAAAACCGATTTTCTCTTCCATTGCCTCACTCCTGCCg < 1:429741/300‑1 (MQ=255) gAAACGACCAGAGAGTCTTTATTCAGGCTGGAGGTGATTTCGCTAAGCACTTTAATCATGATGCCAGGTTTAACGGCAGCAAAAATGATGTCGGCGATTTGCGCCNCTTCTTGCGCCGATTCTGCGGCGTTGATGCCGAACTGGTCATGCAGGGCGGCGACTTTATCCGGGGAGGGGGTGTATACCCAGATTTGCCCTGGAAGCACCTGACCGCTGGCAATCAGACCGCCGAGAATGGCTTTTCCCATATTGCCGCAGCCAATAAAACCGATTTTCTCTTCCATTGCCTCACTCCTGCCg < 2:629228/300‑1 (MQ=255) gAAACGACCAGAGAGTCTTTATTCAGGCTGGAGGTGATTTCGCTAAGCACTTTAATCATGATGCCAGGTTTAACGGCAGCAAAAATGATGTCGGCGATTTGCGCCACTTCTTGCGCCGATTCTGCGGCGTTGATGCCGAACTGGTCATGCAGGGCGGCGACTTTATCCGGGGAGGGGGTGTATACCCAGATTTGCCCTGTAAGCACCTGACCGCTGGCAATCAGACCGCCGAGAATGGCTTTTCCCATATTGCCGCAGCCAATAAAACCGATTTTCTCTTCCATTGCCTCACTCCTGCCg < 2:394480/300‑1 (MQ=255) gTCTTTATTCAGGCTGGAGGTGATTTCGCTAAGCACTTTAATCATGATGCCAGGTTTAACGGCAGCAAAAATGATGTCGGCGATTTGCGCCACTTCTTGCGCCGATTCTGCGGCGTTGATGCCGAACTGGTCATGCAGGGCGGCGACTTTATCCGGGGAGGGGGTGTATACCCAGATTTGCCCTGGAAGCACCTGACCGCTGGCAATCAGACCGCCGAGAATGGCTTTTCCCATATTGCCGCAGCCAATAAAACCGATTTTCTCTTCCATTGCCTCACTCCTGCCGTGAAATTCATTGtt > 1:442947/1‑300 (MQ=255) ttATTCAGGCTGGAGGTGATTTCGCTAAGCACTTTAATCATGATGCCAGGTTTAACGGCAGCAAAAATGATGTCGGCGATTTGCGCCACTTCTTGCGCCGATTCTGCGGCGTTGATGCCGAACTGGTCATGCAGGGCGGCGACTTTATCCGGGGAGGGGGTGTATACCCAGATTTGCCCTGGAAGCACCTGACCGCTGGCAATCAGACCGCCGAGAATGGCTTTTCCCATATTGCCGCAGCCAATAAAACCGATTTTCTCTTCCATTGCCTCACTCCTGCCGTGAAATTCATTGTTTTGa > 2:377984/1‑300 (MQ=255) ggCTGGAGGTGATTTCGCTAAGCACTTTAATCATGATGCCAGGTTTAACGGCAGCAAAAATGATGTCGGCGATTTGCGCCACTTCTTGCGCCGATTCTGCGGCGTTGATGCCGAACTGGTCATGCAGGGCGGCGACTTTATCCGGGGAGGGGGTGTATACCCAGATTTGCCCTGGAAGCACCTGACCGCTGGCAATCAGACCGCCGAGAATGGCTTTTCCCATATTGCCGCAGCCAATAAAACCGATTTTCTCTTCCATTGCCTCACTCCTGCCGTGAAATTCATTGTTTTGATAATCGc > 1:59856/1‑300 (MQ=255) gCTAAGCACTTTAATCATGATGCCAGGTTTAACGGCAGCAAAAATGATGTCGGCGATTTGCGCCACTTCTTGCGCCGATTCTGCGGCGTTGATGCCGAACTGGTCATGCAGGGCGGCGACTTTATCCGGGGAGGGGGTGTATACCCAGATTTGCCCTGGAAGCACCTGACCGCTGGCAATCAGACCGCCGAGAATGGCTTTTCCCATATTGCCGCAGCCAATAAAACCGATTTTCTCTTCCATTGCCTCACTCCTGCCGTGAAATTCATTGTTTTGATAATCGCTGGCAGAAGCATAAAc < 1:84187/300‑1 (MQ=255) cTTTAATCATGATGCCAGGTTTAACGGCAGCAAAAATGATGTCGGCGATTTGCGCCACTTCTTGCGCCGATTCTGCGGCGTTGATGCCGAACTGGTCATGCAGGGCGGCGACTTTATCCGGGGAGGGGGTGTATACCCAGATTTGCCCTGGAAGCACCTGACCGCTGGCAATCAGACCGCCGAGAATGGCTTTTCCCATATTGCCGCAGCCAATAAAACCGATTTTCTCTTCCATTGCCTCACTCCTGCCGTGAAATTCATTGTTTTGATAATCGCTGGCAGAAGCATAAACAGAACTAt > 1:269376/1‑300 (MQ=255) cTTTAATCATGATGCCAGGTTTAACGGCAGCAAAAATGATGTCGGCGATTTGCGCCACTTCTTGCGCCGATTCTGCGGCGTTGATGCCGAACTGGTCATGCAGGGCGGCGACTTTATCCGGGGAGGGGGTGTATACCCAGATTTGCCCTGGAAGCACATGACCGCTGGCAATCAGACCGCCGAGAATGGCTTTTCCCATATTGCCGCAGCCAATAAAACCGATTTTCTCTTCCATTGCCTCACTCCTGCCGTGAAATTCATTGTTTTGATAATCGCTGGCAGAAGCATAAACAGAACTAt > 2:425650/1‑300 (MQ=255) atgCCAGGTTTAACGGCAGCAAAAATGATGTCGGCGATTTGCGCCACTTCTTGCGCCGATTCTGCGGCGTTGATGCCGAACTGGTCATGCAGGGCGGCGACTTTATCCGGGGAGGGGGTGTATACCCAGATTTGCCCTGGAAGCACCTGACCGCTGGCAATCAGACCGCCGAGAATGGCTTTTCCCATATTGCCGCAGCCAATAAAACCGATTTTCTCTTCCATTGCCTCACTCCTGCCGTGAAATTCATTGTTTTGATAATCGCTGGCAGAAGCATAAACAGAACTATGCCGGAAGGCa > 1:389911/1‑300 (MQ=255) tgCCAGGTTTAACGGCAGCAAAAATGATGTCGGCGATTTGCGCCACTTCTTGCGCCGATTCTGCGGCGTTGATGCCGAACTGGTCATGCAGGGCGGCGACTTTATCCGGGGAGGGGGTGTATACCCAGATTTGCCCTGGAAGCACCTGACCGCTGGCAATCAGACCGCCGAGAATGGCTTTTCCCATATTGCCGCAGCCAATAAAACCGATTTTCTATTCCATTGCCTAACTCCTGCCGTGAAATTCATTGTTTTGATAATCGCTGGCAGAAGCATAAACAGAACTATGCCGGAAGGCaa > 1:638286/1‑300 (MQ=255) cAGGTTTAACGGCAGCAAAAATGATGTCGGCGATTTGCGCCACTTCTTGCGCCGATTCTGCGGCGTTGATGCCGAACTGGTCATGCAGGGCGGCGACTTTATCCGGGGAGGGGGTGTATACCCAGATTTGCCCTGGAAGCACCTGACCGCTGGCAATCAGACCGCCGAGAATGGCTTTTCCCATATTGCCGCAGCCAATAAAACCGATTTTCTCTTCCATTGCCTCACTCCTGCCGTGAAATTCATTGTTTTGATAATCGCTGGCAGAAGCATAAACAGAACTATGCCGGAAGGCAAAAg < 1:286165/300‑1 (MQ=255) gTTTAACGGCAGCAAAAATGATGTCGGCGATTTGCGCCACTTCTTGCGCCGATTCTGCGGCGTTGATGCCGAACTGGTCATGCAGGGCGGCGACTTTATCCGGGGAGGGGGTGTATACCCAGATTTGCCCTGGAAGCACCTGACCGCTGGCAATCAGACCGCCGAGAATGGCTTTTCCCATATTGCCGCAGCCAATAAAACCGATTTTCTCTTCCATTGCCTCACTCCTGCCGTGAAATTCATTGTTTTGATAATCGCTGGCAGAAGCATAAACAGAACTATGCCGGAAGGCAAAAgcgc > 1:353691/1‑300 (MQ=255) tCGGCGATTTGCGCCACTTCTTGCGCCGATTCTGCGGCGTTGATGCCGAACTGGTCATGCAGGGCGGCGACTTTATCCGGGGAGGGGGTGTATACCCAGATTTGCCCTGNAAGCACCTGACCGCTGGCAATCAGACCGCCGAGAATGGCTTTTCCCATATTGCCGCAGCCAATAAAACCGATTTTCTCTTCCATTGCCTCACTCCTGCCGTGAAATTCATTGTTTTGATAATCGCTGGCAGAAGCATAAACAGAACTATGCCGGAAGGCAAAAGCGCGACACAATAGAGGATTACCcaac < 1:495749/300‑1 (MQ=255) ccACTTCTTGCGCCGATTCTGCGGCGTTGATGCCGAACTGGTCATGCAGGGCGGCGACTTTATCCGGGGAGGGGGTGTATACCCAGATTTGCCCTGGAAGCACCTGACCGCTGGCAATCAGACCGCCGAGAATGGCTTTTCCCATATTGCCGCAGCCAATAAAACCGATTTTCTCTTCCATTGCCTCACTCCTGCCGTGAAATTCATTGTTTTGATAATCGCTGGCAGAAGCATAAACAGAACTATGCCGGAAGGCAAAAGCGCGAAACAATAGAGGATTACCCAACAAAGGATGACttt > 1:45165/1‑300 (MQ=255) ttcttGCGCCGATTCTGCGGCGTTGATGCCGAACTGGTCATGCAGGGCGGCGACTTTATCCGGGGAGGGGGTGTATACCCAGATTTGCCCTGGAAGCACCTGACCGCTGGCAATCAGACCGCCGAGAATGGCTTTTCCCATATTGCCGCAGCCAATAAAACCGATTTTCTCTTCCATTGCCTCACTCCTGCCGTGAAATTCATTGTTTTGATAATCGCTGGCAGAAGCATAAACAGAACTATGCCGGAAGGCAAAAGCGCGACACAATAGAGGATTACCCAACAAAGGATGACTTTATGa > 2:443750/1‑300 (MQ=255) tcttGCGCCGATTCTGCGGCGTTGATGCCGAACTGGTCATGCAGGGCGGCGACTTTATCCTGGGAGGGGGTGTATACCCAGATTTGCCCTGGAAGCACCTGACCGCTGGCAATCAGACCGCCGAGAATGGCTTTTCCCATATTGCCGCAGCCAATAAAACCGATTTTCTCTTCCATTGCCTCACTCCTGCCGTGAAATTCATTGTTTTGATAATCGCTGGCAGAAGCATAAACAGAACTATGCCGGAAGGCAAAAGCGCGACACAATAGAGGATTACCCAACAAAGGATGACTTTATGAc < 2:122544/300‑1 (MQ=255) cGATTCTGCGGCGTTGATGCCGAACTGGTCATGCAGTGCGGCGACTTTATCCGGGGAGGGGGTGTATACCCAGATTTGCCCTGGAAGCACCTGACCGCTGGCAATCAGACCGCCGAGAATGGCTTTTCCCATATTGCCGCAGCCAATAAAACCGATTTTCTCTTCCATTGCCTCACTCCTGCCGTGAAATTCATTGTTTTGATAATCGCTGGCAGAAGCATAAACAGAACTATGCCGGAAGGCAAAAGCGCGACACAATAGAGGATTACCCAACAAAGGATGACTTTATGACAATTTggg < 2:25872/300‑1 (MQ=255) tGATGCCGAACTGGTCATGCAGGGCGGCGACTTTATCCGGGGAGGGGGTGTATACCCAGATTTGCCCTGGAAGCACCTGACCGCTGGCAATCAGACCGCCGAGAATGGCTTTTCCCATATTGCCGCAGCCAATAAAACCGATTTTCTCTTCCATTGCCTCACTCCTGCCGTGAAATTCATTGTTTTGATAATCGCTGGCAGAAGCATAAACAGAACTATGCCGGAAGGCAAAAGCGCGACACAATAGAGGATTACCCAACAAAGGATGACTTTATGACAATTTGGGTGGATGCCGAcgcg < 1:423315/300‑1 (MQ=255) ccGAACTGGTCATGCAGGGCGGCGACTTTATCCGGGGAGGGGGTGTATACCCAGATTTGCCCTGGAAGCACCTGACCGCTGGCAATCAGACCGCCGAGAATGGCTTTTCCCATATTGCCGCAGCCAATAAAACCGATTTTCTCTTCCATTGCCTCACTCCTGCCGTGAAATTCATTGTTTTGATAATCGCTGGCAGAAGCATAAACAGAACTATGCCGGAAGGCAAAAGCGCGACACAATAGAGGATTACCCAACAAAGGATGACTTTATGACAATTTGGGTGGATGCCGACGCGTGTcc < 1:560657/300‑1 (MQ=255) gAACTGGTCATGCAGGGCGGCGACTTTATCCGGGGAGGGGGTGTATACCCAGATTTGCCCTGGAAGCACCTGACCGCTGGCAATCAGACCGCCGAGAATGGCTTTTCCCATATTGCCGCAGCCAATAAAACCGATTTTCTCTTCCATTGCCTCACTCCTGCCGTGAAATTCATTGTTTTGATAATCGCTGGCAGAAGCATAAACAGAACTATGCCGGAAGGCAAAAGCGCGACACAATAGAGGATTACCCAACAAAGGATGACTTTATGACAATTTGGGTGGATGCCGACGCGTGTCCCa > 1:163099/1‑300 (MQ=255) cTGGTCATGCAGGGCGGCGACTTGATCCGTGGAGGGGGTGTATACCCAGATTTGCCCTGGAAGCACCTGACCGCTGGCAATCAGACCGCCGAGAATGGCTTTTCCCATATTGCCGCAGCCAATAAAACCGATTTTCTCTTCCATTGCCTCACTCCTGCCGTGAAATTCATTGTTTTGATAATCGCTTGCAGAAGCATAAACAGAACTATGCCGGAAGGCAAAAGCGCGACACAATAGAGGATTACCCAACAAAGGATGACTTTATGACAATTTGGGTGGATGCCGACGCGTGTCCCAATg < 2:133170/300‑1 (MQ=255) tGGTCATGCAGGGCGGCGACTTTATCCTGGTAGGGGGTATATACCCAGATTTGCCCTGGAAGCACCTGACCGCTGGCAATCAGACCGCCGAGAATGGCTTTTCCCATATTGCCGCAGCCAATAAAACCGATTTTCTCTTCCATTGCCTCACTCCTGCCGTGAAATTCATTGTTTTGATAATCGCTGGCAGAAGCATAAACAGAACTATGCCGGAAGGCAAAAGCGCGACACAATAGAGGATTACCCAACAAAGGATGACTTTATGACAATTTGGGTGGATGCCGACGCGTGTCCCAATGt < 2:266969/300‑1 (MQ=255) tGGTCATGCAGGGCGGCGACTTTATCCGGGGAGGGGGTGTCTACCCAGATTTGCCCTGGAAGCACCTGACCGCTGGCAATCAGACCGCCGAGAATGGCTTTTCCCATATTGCCGCAGCCAATAAAACCGATTTTCTCTTCCATTGCCTCACTCCTGCCGTGAAATTCATTGTTTTGATAATCGCTGGCAGAAGCNTAAACAGAACTATGCAGGAAGGCAAAAGCGCGACACAATAGAGGATTACCCAACAAAGGCTGACTTTATGACAATTTGGGTGGATGCCGACGCGTGTCCCACTGt > 2:624613/1‑300 (MQ=255) tGGTCATGCAGGGCGGCGACTTTATCCGGGGAGGGGGTGTATACCCAGATTTGCCCTGGAAGCACCTGACCGCTGGCAATCAGACCGCCGAGAATGGCTTTTCCCATATTGCCGCAGCCAATAAAACCGATTTTCTCTTCCATTGCCTCACTCCTGCCGTGAAATTCATTGTTTTGATAATCGCTGGCAGAAGCATAAACAGAACTATGCCGGAAGGCAAAAGCGCGACACAATAGAGGATTACCCAACAAAGGATGACTTTATGACAATTTGGGTGGATGCCGACGCGTGTCCCAATGt < 1:453820/300‑1 (MQ=255) gTCATGCAGGGCGGCGCCTTTATCCGGGGAGGGGGTGTATCCCCAGATTTGCCCTGGAAGCACCTGACCGCTGGCAATCAGACCGCCGAGAATGGCTTTTCCCATATTGCCGCAGCCAATAAAACCGATTTTCTCTTCCATTGCCTCACTCCCGCCGTGAAATTCATTGTTTTGATCATCGCTGGCAGAAGCATAAACAGAACTATGCCGGAAGGCAAAAGCGCGAAACAATAAAGGATTCCCCAACAAAGGCGGACTTTATGATAATTTGGGTGGATGCCGACGCGTGTCCCAACGTaa > 2:380222/1‑300 (MQ=255) gCAGGGCGGCGACTTTATCCGGGGAGGGGGTGTATACCCAGATTTGCCCTGGAAGCACCTGACCGCTGGCAATCAGACCGCCGAGAATGGCTTTTCCCATATTGCCGCAGCCAATAAAACCGATTTTCTCTTCCATTGCCTCACTCCTGCCGTGAAATTCATTGTTTTGATAATCGCTGGCAGAAGCATAAACAGAACTATGCCGGAAGGCAAAAGCGCGACACAATAGAGGATTACCCAACAAAGGATGACTTTATGACAATTTGGGTGGATGCCGACGCGTGTCCCAATGTAATTaaa > 2:416253/1‑300 (MQ=255) aCTTTATCCGGGGAGGGGGTGTATACCCAGATTTGCCCTGGAAGCACCTGACCGCTGGCAATCAGACCGCCGAGAATGGCTTTTCCCATATTGCCGCAGCCAATAAAACCGATTTTCTCTTCCATTGCCTCACTCCTGCCGTGAAATTCATTGTTTTGATAATCGCTGGCAGAAGCATAAACAGAACTATGCCGGAAGGCAAAAGCGCGACACAATAGAGGATTACCCAACAAAGGATGACTTTATGACAATTTGGGTGGATGCCGACGCGTGTCCCAATGTAATTAAAGAGATTTTGTa > 1:253303/1‑300 (MQ=255) cTTTATCCGGGTAGGGGGTGTATACCCAGATTTGCCCTGGAAGCACCGGACCGTTGGCAATAAGACCGCCGAGGATGGCTTTTCCCATATTGCCGCAGCCAATAAAACCGATTTTCTCTTCCATTGCCTCACTCCTGCCGTGAAATTCATTGTTTTGATAATCGCTGGCAGAAGCATAAACAGAACTATGCCGGAAGGCAAAAGCGCGACACAATAGAGGATTACCCAACAAAGGACGACTTTATGACAATTTGGGTGGATGCCGACGCGTGTCCCAATGTAATTAAAGAGATTTTGTAt < 1:719772/300‑1 (MQ=255) ttATCCGGGGAGGGGGTGTATACCCAGATTTGCCCTGGAAGCACCTGACCGCTGGCAATCAGACCGCCGAGAATGGCTTTTCCCATATTGCCGCAGCCAATAAAACCGAGTTTCTCTTCCATTGCCTCACTCCTGCCGTGAAATTCATTGTTTTGATAATCGCTGGCAGAAGCATAAACAGAACTATGCCGGAAGGCAAAAGCGCGACACAATAGAGGATTACCCAACAAAGGATGACTTTATGACAATTTGGGTGGATGCCGACGCGTGTCCCAATGTAATTAAAGAGATTTTGTATcg < 1:127104/300‑1 (MQ=255) aTCCGGGGAGGGGGTGTATACCCAGATTTGCCCTGGAAGCACCTGACCGCTGGCAATCAGACCGCCGAGAATGGCTTTTCCCATATTGCCGCAGCCAATAAAACCGATTTTCTCTTCCATTGCCTCACTCCTGCCGTGAAATTCATTGTTTTGATAATCGCTGGCAGAAGCATAAACAGAACTATGCCGGAAGGCAAAAGCGCGACACAATAGAGGATTACCCAACAAAGGATGACTTTATGACAATTTGGGTGGATGCCGACGCGTGTCCCAATGTAATTAAAGAGATTTTGTATcgcg > 1:73455/1‑300 (MQ=255) ggggTGTATACCCAGATTTGCCCTGGAAGCACCTGACCGCTGGCAATCAGACCGCCGAGAATGGCTTTTCCCATATTGCCGCAGCCAATAAAACCGATTTTCTCTTCCATTGCCTCACTCCTGCCGTGAAATTCATTGTTTTGATAATCGCTGGCAGAAGCATAAACAGAACTATGCCGGAAGGCAAAAGCGCGACACAATAGAGGATTACCCAACAAAGGATGACTTTATGACAATTTGGGTGGATGCCGACGCGTGTCCCAATGTAATTAAAGAGATTTTGTATCGCGCGGCGGAACg > 2:639375/1‑300 (MQ=255) ggTGTATACCCAGCCTTGCCCTGGAAGCACCTGACCGCTGGCAATCAGACCGCCGAGAATGGCTTTTCCCATATTGCCGCAGCCAATAAAACCGATTTTCTCTTCCATTGCCTCACTCCTGCCGTGAAATTCATTGTTTTGATAATCGCTGGCAGAAGCATAAACAGAACTATGCAGGAAGGCAAAAGCGCGACACAATAGAGGATTACCAAACAAAGGATGACTTTATGACAATTTGGGTGGATGCCGACGCGTGTCCAAATGTAATTAAAGAGACTTTGTATCGCGCGGCGGAACGTa > 1:649846/1‑300 (MQ=255) ggTGTATACCCAGATTTGCCCTGGAAGCACCTGACCGCTGGCAATCAGACCGCCGAGAATGGCTTTTCCCATATTGCCGCAGCCAATAAAACCGATTTTCTCTTCCATTGCCTCACTCCTGCCGTGAAATTCATTGTTTTGATAATCGCTGGCAGAAGCATAAACAGAACTATGCAGGAAGGCAAAAGCGCGAAACAATAGAGGATTACCCAACAAAGGATGACTTTATGACAATTTGGGTGGATGCCGACGCGTGTCCCAATGTAATTAAAGAGATTTTGTATCGCGCGGCGGAACGTa > 1:178045/1‑300 (MQ=255) ggTGTATACCCAGATTTGCCCTGGAAGCACCNGACCGCTGGCAATCAGACCGCCGAGAATGGCTTTTCCCATCTTGCCGCCGTCGATAAAACCGGTTTTCTCTTCCCTTTCCTCCCTCCTGCCANGAAATTCATTGTTTTGATAATCGCTGCCAGAAGCCTAAACAGCACTATTCCGGAAAGCAACAGCGCGATACAATGGAGGAGTAATCGCAAAAGGATGACTTTGTGGCAATTTGGGTGGACGCCGCCGCATGTACCACTGTAATTACAGGGGTTTTTTATCTCGCGGTGGCACGTa > 2:502926/1‑300 (MQ=255) gtgtATACCCAGATTTGCCCTGGAAGCACCTGACCGCTGGCAATCAGACCGCCGAGAATGGCTTTTCCCATATTGCCGCAGCCAATAAAACCGATTTTCTCTTCCATTGCCTCACTCCTGCCGTNAAATTCATTGTTTTGATAATCGCTGGCAGAAGCATAAACAGAACTATGCCGGAAGGCAAAANCGCGACACAATAGAGGATTACCCAACAAAGGATGCCTTTATGACAATTTGGGTGGATGCCGACGCGTGTCCCAATGTACTTCAAGAGATTTTGTATCGCGCGGCTGAACGTac > 2:565261/1‑299 (MQ=255) gtgtATACCCAGATTTGCCCTGGAAGCACCTGACCGCTGGCAATCAGACCGCCGAGAATGGCTTTTCCCATATTGCCGCAGCCAATAAAACCGATTTTCTATTCCATTGCCTCACTCCTGCCGTGAAATTCATTGTTTTGATAATCGCTGGCAGAAGCATAAACAGAACTATGCAGGAAGGCAAAAGCGCGACACAATAGAGGATTACCCAACAAAGGATGACTTTATGACAATTTGGGTGGATGNCGACGCGTGTCCCAATGTAATTCAAGAGATTTTGTATCGCGCGGCGGAACGtct > 2:529598/1‑298 (MQ=255) gtgtATACCCAGATTTGCCCTGGAAGCACCTGACCGCTGGCAATCAGACCGCCGAGAATGGCTTTTCCCATATTGCCGCAGCCAACAAAAACGAGTTTCTCCTACATTGCCTCACTACTGACGTGAAATTTATCGCTTTGATAATCGCTGGCAAACGCATAAACAGAACTATGCAGGAAGGCAAAAGTGCGACACAATAGAGGATTACCCAACAAAGGATGAATTTATGACAATTTGGGTGGATGCCGACGTGGGTCCAAATGTAATTAAAGAAATCTTGTACTGCGCGGCGGAACGTAt > 2:54900/1‑300 (MQ=255) tgtATACCCAGATTTGCCCTGGAAGCACCTGACCGCTGGCAATCAGACCGCCGAGAATGGCTTTTCCCATATTGCCGCAGCCAATAAAACCGATTTTCTCTTCCATTGCCTCACTCCTGCCGTGAAATTCATTGTTTTGATAATCGCTGGCAGAAGCATAAACAGAACTATGCCGGAAGGCAAAAGCGCGACACAATAGAGGATTACCCAACAAAGGATGACTTTATGACAATTTGGGTGGATGCCGACGCGTGTCCCAATGTAATTAAAGAGATTTTGTATCGCGCGGCGGAACGTATg > 1:237574/1‑300 (MQ=255) gtATACCCAGATTTGCCCTGGAAGCACCTGACCGCTGGCAATCAGACCGCCGAGAATGGCTTTTCCCATATTGCCGCAGCCAATAAAACCGATTTTCTCTTCCATTGCCTCACTCCTGCCGTGAAATTCATTGTTTTGATAATCGCTGGCAGAAGCATAAACAGAACTATGCCGGAAGGCAAAAGCGCGACACAATAGAGGATTACCCAACAAAGGATGACTTTATGACAATTTGGGTGGATGCCGACGCGTGTCCCAATGTAATTAAAGAGATTTTGTATCGCGCGGCGGAACGTATGc < 2:89313/300‑1 (MQ=255) ataCCCAGATTTGCCCTGGAAGCACCTGACCGCTGGCAATCAGACCGCCGAGAATGGCTTTTCCCATATTGCCGCAGCCAATAAAACCGATTTTCTCTTCCATTGCCTCACTCCTGCCGTGAAATTCATTGTTTTGATAATCGCTGGCAGAAGCATAAACAGAACTATGCCGGAAGGCAAAAGCGCGACACAATAGAGGATTACCCAACAAAGGATGACTTTATGACAATTTGGGTGGATGCCGACGCGTGTCCCAATGTAATTAAAGAGATTTTGTATCGCGCGGCGGAACGTATGCAg < 1:415798/300‑1 (MQ=255) aCCCAGATTTGCCCTGGAAGCACCTGACCGCTGGCAATCAGACCGCCGAGAATGGCTTTTCCCATATTGCCGCAGCCAATAAAACCGATTTTCTCTTCCATTGCCTCACTCCTGCCGTGACACTCATTGTTTTGATAATCGCTGGCAGAAGCATAAACAGAACTCTGCAGGAAGGCAAAAGTGCGACACAATAGAGGATCACCCAACAAAGGATGACTTTATGGCAATTTGGGTAGATGCCGACGCGTGTCCCACTGTACTTAAAGAGATTTTGTATCGCGCGGCGGAAAGTATGCCGAt > 2:203706/1‑300 (MQ=255) ttccTGGAAGCACCTTACCGCTGGCAATCATACCGCCTAGAGTTGCTTTTCCCATATTGCCGCAGCCAATAAAACCGATTTTCCCTTCCATTGCCTCACTCCTGCCGTGAAATTCATTGTTTTGATAATCGCTGGCAGAAGCAGAAACAGAACTAGGCCGGAAGGCAAAAGCGCGACACAATAGAGGATTACCCAACAAAGGATGACTTTATGACAATTTTGGTGGATGCCGACGCGTGTCCCAATGTAATTAAATAGATTTTGTATCGCGCGGCGGAACGTATGCAGATGCCGctggta < 2:60922/298‑1 (MQ=255) ggAAGCACCTGACCGCTGGCAATCAGACCGCCGAGAATGGCTTTTCCCATATTGCCNCAGCCAATAAAACCGATTTTCTCTTCCATTGCCTCACTCCTGCCGTGAAATTCATTGTTTTGATAATCGCTGGCAGAAGCATAAACAGAACTATGCCGGAAGGCAAAAGCGCGACACAATAGAGGATTACCCCACAAAGGATGACTTTATGACAATTTGGGTGGATGCCGACGCGTGTCCCAATGTAANTAAAGAGATTTTGTATCGCGCGGCGGAACGTATGCAGATGCCGctggtactggt > 2:661372/1‑300 (MQ=255) ggAAGCACCTGACCGCTGGCAATCAGACCGCCGAGAATGGCTTTTCCCATATTGCCGCAGCCAATAAAACCGATTTTCTCTTCCATTGCCTCACTCCTGCCGTGAAATTCATTGTTTTGATAATCGCTGGCAGAAGCATAAACAGAACTATGCCGGAAGGCAAAAGCGCGACACAATAGAGGATTACCCAACAAAGGATGACTTTATGACAATTTGGGTGGATGCCGACGCGTGTCCAAATGTAATTAAAGAGATTTTGTATCGCGCGGCGGAACGTATGCAGATGCCGctggtactggt > 1:152099/1‑300 (MQ=255) cACCTGACCGCTGGCAATCAGACCGCCGAGAATGGCTTTTCCCATATTGCCGCAGCCAATAAAACCGATTTTCTCTTCCATTGCCTCACTCCTGCCGTGAAATTCATTGTTTTGATAATCGCTGGCAGAAGCATAAACAGAACTATGCCGGAAGGCAAAAGCGCGACACAATAGAGGATTACCCAACAAAGGATGACTTTATGACAATTTGGGTGGATGCCGACGCGTGTCCCAATGTAATTAAAGAGATTTTGTATCGCGCGGCGGAACGTATGCAGATGCCGCTGGTACTGGTAGCaa > 1:95025/1‑300 (MQ=255) ccGCTGGCAATCAGACCGCCGAGAATGGCTTTTCCCATATTGCCGCAGCCAATAAAACCGATTTTCTCTTCCATTGCCTCACTCCTGCCGTGAAATTCATTGTTTTGATAATCGCTGGCAGAAGCATAAACAGAACTATGCCGGAAGGCAAAAGCGCGACACAATAGAGGATTACCCAACAAAGGATGACTTTATGACAATTTGGGTGGATGCCGACGCGTGTCCCAATGTAATTAAAGAGATTTTGTATCGCGCGGCGGAACGTATGCAGATGCCGCTGGTACTGGTAGCAAACCagag < 1:593898/300‑1 (MQ=255) aaTCAGACCGCCTAGAATGGCTTTTCCCATATTGCCGCAGCCAATAAAACCGATTTTCTCTTCCATTGCCTCACTCCTGCCGTGAAATTCATTGTTTTGATAATCGCTGGCAGAAGCATAAACAGAACTATGCCGGAAGGCAAAAGCGNGACACAATAGAGGATTACCCAACAAANGATGACTTTATGACAATTTGGGTGGATGCCGACGCGTGTCCCAATTTAATTAAAGAGATTTTGTATCGCGCGGCGGAACGTATGCAGATGCCGCTGGTACTGGTAGCAAACCAGAGTTTAcgcg < 2:483275/300‑1 (MQ=255) aaTCAGACCGCCGAGAATGGCTTTTCCCATATTGCCGCAGCCAATAAAACCGATTTTCTCTTCCATTGCCTCACTCCTGCCGTGAAATTCATTGTTTTGATAATCNCTGGCAGAAGCATAAACAGAACTATGCCGGAAGGCAAAAGCGCGACACAATAGAGGATTACCCAACAAAGGATGACTTTATGACAATTTGGGTGGATGCCGACGCGTGTCCCAATGTAATTAAAGAGATTTTGTATCGCGCGGCGGAACGTATGCAGATGCCGCTGGTACTGGTAGCAAACCAGAGTTTAcgcg < 2:635546/300‑1 (MQ=255) aaTCAGACCGCCGAGAATGGCTTTTCCCATATTGCCGCAGCCAATAAAACCGATTTTCTCTTCCATTGCCTCACTCCTGCCGTGAAATTCATTGTTTTGATAATCGCTGGCAGAAGCATAAACAGAACTATGCCGGAAGGCAAAAGCGCGACACAATAGAGGATTACCCAACAAAGGATGACTTTATGACAATTTGGGTGGATGCCGACGCGTGTCCCAATGTAATTAAAGAGATTTTGTATCGCGCGGCGGAACGTATGCAGATGCCGCTGGTACTGGTAGCAAACCAGAGTTTAcgcg < 1:432765/300‑1 (MQ=255) gCTTTTCCCATATTGCCGCAGCCAATAAAACCGATTTTCTCTTCCATTGCCTCACTCCTGCCGTGAAATTCATTGTTTTGATAATCGCTGGCAGAAGCATAAACAGAACTATGCCGGAAGGCAAAAGCGCGACACAATAGAGGATTACCCAACAAAGGATGACTTTATGACAATTTGGGTGGATGCCGACGCGTGTCCCAATGTAATTAAAGAGATTTTGTATCGCGCGGCGGAACGTATGCAGATGCCGCTGGTACTGGTAGCAAACCAGAGTTTACGCGTGCCGCCATCGCGATTTAt > 1:571674/1‑300 (MQ=255) tttCCCATATTGCCGCAGCCAATAAAACCGATTTTCTCTTCCATTGCCTCACTCCTGCCGTGAAATTCATTGTTTTGATAATCGCTGGCAGAAGCATAAACAGAACTATGCCGGAAGGCAAAAGCGCGACACAATAGAGGATTACCCAACAAAGGATGACTTTATGACAATTTGGGTGGATGCCGACGCGTGTCCCAATGTAATTAAAGAGATTTTGTATCGCGCGGCGGAACGTATGCAGATGCCGCTGGTACTGGTAGCAAACCAGAGTTTACGCGTGCCGCCATCGCGATTTATTCg < 1:81294/300‑1 (MQ=255) cATATTGCCGCAGCCAATAAAACCGATTTTCTCTTCCATTGCCTCACTCCTGCCNTGAAATTCATTGTTTTGATAATCGCTGGCAGAAGCATAAACAGAACTATGCCGGAAGGCAAAAGCGCGACACAATAGAGGATTACCCAACAAAGGATGACTTTATGACAATTTGGGTGGATGCCGACGCGTGTCCCAATGTAATTAAAGAGATTTTGTATCGCGCGGCGGAACGTATGCAGATGCCGCNGGTACTGGTAGCAAACCAGAGTTTACGCGTGCCGCCATCGCGATTTATTCGTACGc < 2:663171/300‑1 (MQ=255) cATATTGCCGCAACCAATAAAACCGATTTTCTCTTCCATTGCCTCACTCCTGCCGTGAAATTCATTGTTTTGATAATCGCTGGCAGAAGCATAAACAGAACTATGCCGGAAGGCAAAAGCGCGACACAATAGAGGATTACCCAACAAAGGATGACTTTATGACAATTTGGGTGGATGCCGACGCGTGTCCCAATGTAATTAAAGAGATTTTGTATCGCGCGGCGGAACGTATGCAGATGCCGCTGGTACTGGTAGCAAACCAGAGTTTACGCGTGCCGCCATCGCGATTTATTCGTACGc < 2:697396/300‑1 (MQ=255) tatTGCCGCAGCCAATAAAACCGATTTTCTCTTCCATTGCCTCACTCCTGCCGTGAAATTCATTGTTTTGATAATCGCTGGCAGAAGCATAAACAGAACTATGCCGGAAGGCAAAAGCGCGACACAATAGAGGATTACCCAACAAAGGATGACTTTATGACAATTTGGGTGGATGCCGACGCGTGTCCCAATGTAATTAAAGAGATTTTGTATCGCGCGGCGGAACGTATGCAGATGCCGCTGGTACTGGTAGCAAACCAGAGTTTACGCGTGCCGCCATCGCGATTTATTCGTACGCTg < 1:26024/300‑1 (MQ=255) cAGCCAATAAAACCGATTTTCTCTTCCATTGCCTCACTCCTGCCGTGAAATTCATTGTTTTGATAATCGCTGGCAGAAGCATAAACAGAACTATGCCGGAAGGCAAAAGCGCGACACAATAGAGGATTACCCAACAAAGGATGACTTTATGACAATTTGGGTGGATGCCGACGCGTGTCCCAATGTAATTAAAGAGATTTTGTATCGCGCGGCGGAACGTATGCAGATGCCGCTGGTACTGGTAGCAAACCAGAGTTTACGCGTGCCGCCATCGCGATTTATTCGTACGCTGCGCGTcgc < 2:240891/300‑1 (MQ=255) gCCAATAAAACCGATTTTCTCTTCCATTGCCTCACTCCTGCCGTGAAATTCATTGTTTTGATAATCGCTGGCAGAAGCATAAACAGAACTATGCCGGAAGGCAAAAGCGCGACACAATAGAGGATTACCCAACAAAGGATGACTTTATGACAATTTGGGTGGATGCCGACGCGTGTCCCAATGTAATTAAAGAGATTTTGTATCGCGCGGCGGAACGTATGCAGATGCCGCTGGTACTGGTAGCAAACCAGAGTTTACGCGTGCCGCCATCGCGATTTATTCGTACGCTGCGCGTCGCgg > 1:161116/1‑300 (MQ=255) cAATAAAACCGATTTTCTCTTCCATTGCCTCACTCCTGCCGTGAAATTCATTGTTTTGATAATCGCTGGCAGAAGCATAAACAGAACTATGCCGGAAGGCAAAAGCGCGACACAATAGAGGATTACCCAACAAAGGATGACTTTATGACAATTTGGGTGGATGCCGACGCGTGTCCCAATGTAATTAAAGAGATTTTGTATCGCGCGGCGGAACGTATGCAGATGCCGCTGGTACTGGTAGCAAACCAGAGTTTACGCGTGCCGCCATCGCGATTTATTCGTACGCTGCGCGTCGCGGCa > 1:713517/1‑300 (MQ=255) | CCTGCAGCAATAGAAACGACCAGAGAGTCTTTATTCAGGCTGGAGGTGATTTCGCTAAGCACTTTAATCATGATGCCAGGTTTAACGGCAGCAAAAATGATGTCGGCGATTTGCGCCACTTCTTGCGCCGATTCTGCGGCGTTGATGCCGAACTGGTCATGCAGGGCGGCGACTTTATCCGGGGAGGGGGTGTATACCCAGATTTGCCCTGGAAGCACCTGACCGCTGGCAATCAGACCGCCGAGAATGGCTTTTCCCATATTGCCGCAGCCAATAAAACCGATTTTCTTTTCCATTGCCTCACTCCTGCCGTGAAATTCATTGTTTTGATAATCGCTGGCAGAAGCATAAACAGAACTATGCCGGAAGGCAAAAGCGCGACACAATAGAGGATTACCCAACAAAGGATGACTTTATGACAATTTGGGTGGATGCCGACGCGTGTCCCAATGTAATTAAAGAGATTTTGTATCGCGCGGCGGAACGTATGCAGATGCCGCTGGTACTGGTAGCAAACCAGAGTTTACGCGTGCCGCCATCGCGATTTATTCGTACGCTGCGCGTCGCGGCA > NC_000913/405349‑405919 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |