| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,345,203 | Δ1 bp | coding (1540/1986 nt) | pdeR ← | cyclic di‑GMP phosphodiesterase PdeR |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,345,203 | 0 | T | . | 98.3% | 301.7 / ‑1.3 | 60 | coding (1540/1986 nt) | pdeR | cyclic di‑GMP phosphodiesterase PdeR |
| Reads supporting (aligned to +/- strand): ref base T (0/1); new base . (35/24); total (35/25) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.17e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.55e-01 | |||||||||||
TTCAATGCCTGGGCCACAGCGACGATCGCCCGGACCAGTGACTGCGAGACAGGTTGTTTGTGAATATCTCGAACAAAAACCTGGTCAAGTTTGATGGCATCGATCGGAAAGCGCGCCAGTTGCGAAAGTGAAGAGTAGCCGGTACCAAAATCATCCAGATGCACTTGCGCACCTAGTTGGCTAAATTGTTGAATAACAGACAGTGCCAGTTCATCATTCTCAATCAGACAACTCTCTGTCAGTTCAACATCTATAGGGCAGTATTCAAAATTGAGTTCCTGGAGAACCTGTTTCAGGGCGGTGAAAATGGTTTGATCGGCGAGCTGACGTGCAGAAATATTTACCGCCACTCGCAGGTTTATGCCTTTATCCCGCCACTTTGCCACCTGGCGTACGACATCGAGAATCACCCAACGGCCTAAAGGCACAATTAGCCCTGACTCTTCGGCGTAGGAAATGAAGTCCAACGGTGGAATCAACCCACGTTCAGGTGACTGCCAACGTACTAGTGCTTCCAGACTGCGCACTTCGCCACGCCAGGTGATTTTCGGTTGATAGTGAATAACCAACTGATCGTTTTCCAGTGCTTT > NC_000913/1344911‑1345500 | ttCAATGCCTGGGCCACAGCGACGATCGCCCGGACCAGTGACTGCGAGACAGGTTGTTTGTGAATATCTCGAACAAAAACCTGGTCAAGTTTGATGGCATCGATCGGAAAGCGCGCCAGTTGCGAAAGTGAAGAGTAGCCGGTACCAAAATCATCCAGATGCACTTGCGCACCTAGTTGGCTAAATTGTTGAATAACAGACAGTGCCAGTTCATCATTCTCAATCAGACAACTCTCTGTCAGTTCAACATCTATAGGGCAGTATTCAAAATTGAGTTCCTGGAGAACCTGTT‑CAGGGCgg > 1:441713/1‑300 (MQ=255) gggCCACAGCGACGATCGCCCGGACCAGTGACTGCGAGACAGGTTGTTTGTGAATATCTCGAACAAAAACCTGGTCAAGTTTGATGGCATCGATCGGAAAGCGCGCCAGTTGCGAAAGTGAAGAGTAGCCGGTACCAAAATCATCCAGATGCACTTGCGCACCTAGTTGGCTAAATTGTTGAATAACAGACAGTGCCAGTTCATCATTCTCAATCAGACAACTCTCTGTCAGTTCAACATCTATAGGGCAGTATTCAAAATTGAGTTCCTGGCGAACCTGTT‑CAGGGCGGTGAAAATGGt > 2:409316/1‑300 (MQ=255) cGCCCGGACCAGTGACTGCGAGACAGGTTGTNTGTGAATATCTCGAACAAAAACCTGGTCAAGTTTGATGGCATCGATCGGAAAGCGCGCCAGTTGCGAAAGTGAAGAGTAGCCGGTACCAAAANCATCCAGATGCACTTGCGCACCTAGTTGGCTAAATTGTTGAATAACAGACAGTGCCAGTTCATCATTCTCAATCAGACAACTCTCTGTCAGTTCAAAATCTATAGGGCAGTATTCAAAATTGAGTTCCTGGAGAACCTGTT‑CAGGGCGGTGAAAATGGTTTGATCGGCGAGCTGa > 2:505327/1‑300 (MQ=255) gCCCGGACCAGTGACTGCGAGACAGGTTGTTTGTGAATATCTCGAACAAAAACCTGGTCAAGTTTGATGGCATCGATCGGAAAGCGCGCCAGTTGCGAAAGTGAAGAGTAGCCGGTACCAAAATCATCCAGATGCACTTGCGCACCTAGTTGGCTAAATTGTTGAATAACAGACAGTGCCAGTTCATCATTCTCAATCAGACAACTCTCTGTCAGTTCAACATCTATAGGGCAGTATTCAAAACTGAGTTCCTGGAGAACCTGTT‑CAGGGCGGTGAAAATGGTTTGATCGGCGAGCTGAc > 2:95522/1‑300 (MQ=255) aCCAGTGACTGCGAGACAGGTTGTTTGTGAATATCTCGAACAAAAACCTGGTCAAGTTTGATGGCATCGATCGGAAAGCGCGCCAGTTGCGAAAGTGAAGAGTAGCCGGTACCAAAATCATCCAGATGCACTTGCGCACCTAGTTGGCTAAATTGTTGAATCACAGACAGTGCCAGTCCATCATTCTCAATCAGACAACTCTCTGTCAGTTCAACATCTATAGGGCAGTATTCAAAATTGAGTTCCTGGAGAACCTGTT‑CAGGGCGGTGAAAATGGTTCGATCGGCGAGCTGACGTGCAg > 2:70747/1‑300 (MQ=255) gcgagatgtgtataagaaacagatCTCGAACAAAAACCTGGTCAAGTTTGATGGCATCGATCGGAAAGCGCGCCAGTTGCGAAAGTGAAGAGTAGCCGGTACCAAAATCATCCAGATGCACTTGCGCACCTAGTTGGCTAAATTGTTGAATAACAGACAGTGCCAGTTTATCATTCTCCATCAGACAACTCTCTGTCAGTTCAACATCTATAGGGCAGGATTCAAAATTGAGTTCCTGGAGAACCTGTT‑CAGGGCGGTGAAAACGGTTTGATCGGCGAGCTGACGTGCAGCAATATTTAc > 2:268602/23‑300 (MQ=255) gagaCAGGTTGTTTGTGAATATCTCGAACAAAAACCTGGTCAAGTTTGATGGCATCGATCGGAAAGCGCGCCAGTTGCGAAAGTGAAGAGTAGCCGGTACCAAAATCATCCAGATGCACTTGCGCACCTAGTTGGCTAAATTGTTGAATAACAGACAGTGCCAGTTCATCATTCTCAATCAGACAACTCTCTGTCAGTTCAACATCTATAGGGCAGTATTCAAAATTGAGTTCCTGGAGAACCTGTT‑CAGGGCGGTGAAAATGGTTTGATCGGCGAGCTGACGTGCAGAAATATTTACCg < 1:690631/300‑1 (MQ=255) tgtttgtGAATATCTCGAACAAAAACCTGGTCAAGTTTGATGGCATCGATCGGAAAGCGCGCCAGTTGCGAAAGTGAAGAGTAGCCGGTACCAAAATCATCCAGATGCACTTGCGCACCTAGTTGGCTAAATTGTTGAATAACAGACAGTGCCAGTTCATCATTCTCAATCAGACAACTCTCTGTCAGTTCAACATCTATAGGGCAGTATTCAAAATTGAGTTCCTGGAGAACCTGTT‑CAGGGCGGTGAAAATGGTTTGATCGGCGAGCTGACGTGCAGAAATATTTACCGCCACTCGCa < 1:703115/300‑1 (MQ=255) atatCTCGAACAAAAACCTGGTCAAGTTTGATGGCATCGATCGGAAAGCGCGCCAGTTGCGAAAGTGAAGAGTAGCCGGTACCAAAATCATCCAGATGCACTTGCGCACCTAGTTGGCTAAATTGTTGAATAACAGACAGTGCCAGTTCATCATTCTCAATCAGACAACTCTCTGTCAGTTCAACATCTATAGGGCAGTATTCAAAATTGAGTTCCTGGAGAACCTGTT‑CAGGGCGGTGAAAATGGTTTGATCGGCGAGCTGACGTGCAGAAATATTTACCGCCACTCGCAGGTTTATGc < 1:139219/300‑1 (MQ=255) aaCAAAAACCTGGTCAAGTTTGATGGCATCGATCGGAAAGCGCGCCAGTTGCGAAAGTGAAGAGTAGCCGGTACCAAAATCATCCAGATGCACTTGCGCACCTAGTTGGCTAAATTGTTGAATAACAGACAGTGCCAGTTCATCATTCTCAATCAGACAACTCTCTGTCAGTTCAACATCTATAGGGCAGTATTCAAAATTGAGTTCCTGGAGAACCTGTT‑CAGGGCGGTGAAAATGGTTTGATCGGCGAGCTGACGTGCAGAAATATTTACCGCCACTCGCAGGTTTATGCCTTTATcc < 1:407429/300‑1 (MQ=255) gTTTGATGGCATCGATCGGAAAGCGCGCCAGTTGCGAAAGTGAAGAGTAGCCGGTACCAAAATCATCCAGATGCACTTGCGCACCTAGTTGGCTAAATTGTTGAATAACAGACAGTGCCAGTTCATCATTCTCAATCAGACAACTCTCTGTCAGTTCAACATCTATAGGGCAGTATTCAAAATTGAGTTCCTGGAGAACCTGTT‑CAGGGCGGTGAAAATGGTTTGATCGGCGAGCTGACGTGCAGAAATATTTACCGCCACTCGCAGGTTTATGCCTTTATCCCGCCACTTTGCCACCTg > 1:393567/1‑300 (MQ=255) tttGATGGTATCGATCGGAAAGCGCGCCAGTTGCGAAAGTGAAGAGTAGCCGGTACCAAAATCATCCAGATGCACTTGCGCACCTAGTTGGCTAAATTGTTGAATAACAGACAGTGCCAGTTCATCATTCTCAATCAGACAACTCTCTGTCAGTTCAACATCTATAGGGCAGTATTCAAAATTGAGTTCCTGGAGAACCTGTT‑CAGGGCGGTGAAAATGGTTTGATCGGCGAGCTGACGTGCAGAAATATTTACCGCCACTCGCAGGTTTATGCCTTTATCCCGCCACTTTGCCACCTgg < 1:281566/300‑1 (MQ=255) tttGATGGCATCGATCGGAAAGCGCGCCAGTTGCGAAAGTGAAGAGTAGCCGGTACCAAAATCATCCAGATGCACTTGCGCACCTAGTTGGCTAAATTGTTGAATAACAGACAGTGCCAGTTCATCATTCTCAATCAGACAACTCTCTGTCAGTTCAACATCTATAGGGCAGTATTCAAAATTGAGTTCCTGGAGAACCTGTT‑CAGGGCGGTGAAAATGGTTTGATCGGCGAGCTGACGTGCAGAAATATTTACCGCCACTCGCAGGTTTATGCCTTTATCCCGCCACTTTGCCACCTgg < 1:281610/300‑1 (MQ=255) gCATCGATCGGAAAGCGCGCCAGTTGCGAAAGTGAAGAGTAGCCGGTACCAAAATCATCCAGATGCACTTGCGCACCTAGTTGGCTAAATTGTTGAATAACAGACAGTGCAAGTTCATCATTCTCAATCAGACAACTCTCTGTCAGTTCAACATCTATAGGGCAGTATTCAAAATTGAGTTCCTGGAGAACCTGTT‑CAGGGCGGTGAAAATGGTTTGATCGGCGAGCTGACGTGCAGAAATATTTACCGCCAATCGCAGGTTTATGCCTTTATCCCGCCACTTTGCCACCTGGCGTCCGa > 2:397513/1‑300 (MQ=255) cATCGATCGGAAAGCGCGCCAGTTGCGAAAGTGAAGAGTAGCCGGTACCAAAATCATCCAGATGCACTTGCGCACCTAGTTGGCTAAATTGTTGAATAACAGACAGTGCCAGTTCATCATTCTCAATCAGACAACTCTCTGTCAGTTCAACATCTATAGGGCAGTATTCAAAATTGAGTTCCTGGAGAACCTGTT‑CAGGGCGGTGAAAATGGTTTGATCGGCGAGCTGACGTGCAGAAATATTTACCGCCACTCGCAGGTTTATGCCTTTATCCCGCCACTTTGCCACCTGGCGTACGAc < 1:19693/300‑1 (MQ=255) cgatcgGAAAGCGCGCCAGTTGCGAAAGTGAAGAGTAGCCGGTACCAAAATCATCCAGATGCACTTGCGCACCTAGTTGGCTAAATTGTTGAATAACAGACAGTGCCAGTTCATCATTCTCAATCAGACAACTCTCTGTCAGTTCAACATCTATAGGGCAGTATTCAAAATTGAGTTCCTGGAGAACCTGTT‑CAGGGCGGTGAAAATGGTTTGATCGGCGAGCTGACGTGCAGAAATATTTACCGCCACTCGCAGGTTTATGCCTTTATCCCGCCACTTTGCCACCTGGCGTACGACATc > 1:147452/1‑300 (MQ=255) atcgGAAAGCGCGCCAGTTGCGAAAGTGAAGAGTAGCCGGTACCAAAATCATCCAGATGCACTTGCGCACCTAGTTGGCTAAATTGTTGAATAACAGACAGTGCCAGTTCATCATTCTCAATCAGACAACTCTCTGTCAGTTCAACATCTATAGGGCAGTATTCAAAATTGAGTTCCTGGAGAACCTGTT‑CAGGGCGGTGAAAATGGTTTGATCGGCGAGCTGACGTGCAGCAATATTTACCGCCACTCGCAGGTTTATGCCTTTATCCCGCCACTTTGCCACCTGGCGTACGAAATCga > 2:61604/1‑300 (MQ=255) atcgGAAAGCGCGCCAGTTGCGAAAGTGAAGAGTAGCCGGTACCAAAATCATCAAGATGCACTTGCGCACCTAGTTGGCTAAATTGTTGAATAACAGACAGTGCCAGTTCATCATTCTCAATCAGACAACTCTCTGTCAGTTCAACATCTATAGGGCAGTATTCAAAATTGAGTTCCTGGAGGACCTGTT‑CAGGGCGGTGAAAATGGCTTGATCGGCGAGCTGACGTGCAGCAATCTTTACCGCCACTCGCAGGTTTATGCCTTTATCCCGCCACTTTGCCACCTGGCGTACGACATCga > 2:192567/1‑300 (MQ=255) aGTTGCGAAAGTGAAGAGTAGCCGGTACCAAAATCATCCAGATGCACTTGCGCACCTAGTTGGCTAAATTGTTGAATAACAGACAGTGCCAGTTCATCATTCTCAATCAGACAACTCTCTGTCAGTTCAACATCTATAGGGCAGTATTCAAAATTGAGTTCCTGGAGAACCTGTT‑CAGGGCGGTGAAAATGGTTTGATCGGCGAGCTGACGTGCAGAAATATTTACCGCCACTCGCAGGTTTATGCCTTTATCCCGCCACTTTGCCACCTGGCGTACGACATCGAGAATCAACCAACGGc > 1:627849/1‑300 (MQ=255) cGAAAGTGAAGAGGAGCCGGTACCAAAATCATCCAGATACACTTGCGCACCTAGTTGGCTAAATTGTTGAATAACAGACAGTGCCAGTTCATCATTCTCAATCAGACAACTCTCTGTCAGTTCAACATCTATAGGGCAGTATTCAAAATTGAGTTCCTGGAGAACCTGTT‑CAGGGCGGTGAAAATGGTTTGATCGGCGAGCTGACGTGCAGAAATATTTACCGCCACTCGCAGGTTTATGCCTTTATCCCGCCACTTTGCCACCTGGCGTACGACATCGAGAATCACCCAACGGCCTaaa < 1:259753/300‑1 (MQ=255) aGTGAAGAGTAGCCGGTACCAAAATCATCCAGATGCACTTGCGCACCTAGTTGGCTNAATTGTTGAATAACAGACAGTGCCAGTTCATCATTCTCAATCAGACAACTCTCTGTCAGTTCAACATCTATAGGGCAGTATTCAAAATTGAGTTCCTGGAGAACCTGTT‑CGGGGCGGTGAAAATGGTTTGATCGGCGAGCTGACGTGCAGAAATATTTACCGCCACTCGCAGGTTTATGCCTTTATCCNGCCACTTTGCCACCTGGCGTAAGACATCGAGAATCACCCAACGGACTAAAGGca > 2:672614/1‑300 (MQ=255) aaGAGTAGCCGGTACCAAAATCATCCAGATGCACTTGCGCACCTAGTTAGCTAAATTGTTGAATAACAGACAGTGCCAGTTCATCATTCTCAATCAGACAACTCTCTGTCAGTNCAACATCTATAGGGCAGTATTCAAAATTGAGTTCCTGGAGAACCTGTT‑CAGGGCGGTGAAANTGGTTTGATCGGCGAGCTGACGTGCAGAAATATTTACCGCCACTCGCAGGTTTATGCCTTTATCCCGCCACTTTGCCACCTGGCGTACGACATCGAGAATCACCCAACGGCCTAAAGGCACAAt < 2:575753/300‑1 (MQ=255) gagTAGCCGGTACCAAAATCATCCAGATGCACTTGCGCACCTAGTTGGCTAAATTGTTGAATAACAGACAGTGCCAGTTCATCATTCTCAATCAGACAACTCTCTGTCAGTTCAACATCTATAGGGCAGTATTCAAAATTGAGTTCCTGGAGAACCTGTT‑CAGGGCGGTGAAAATGGTTTGATCGGCGAGCTGACGTGCAGAAATATTTACCGCCACTCGCAGGTTTATGCCTTTATCCCGCCACTTTGCCACCTGGCGTACGACATCGAGAATCACCCAACGGCCTAAAGGCACAATTa > 2:418893/1‑300 (MQ=255) gTACCAAAATCATCCAGATGCACTTGCGCACCTAGTTGGCTAAATTGTTGAATAACAGACAGTGCCAGTTCATCATTCTCAATCAGACAACTCTCTGTCAGTTCAACATCTATAGGGCAGTATTCAAAATTGAGTTCCTGGAGAACCTGTT‑CAGGGCGGTGAAAATGGTTTGATCGGCGAGCTGACGTGCAGAAATATTTACCGCCACTCGCAGGTTTATGCCTTTATCCCGCCACTTTGCCACCTGGCGTACGACATCGAGAATCACCCAACGGCCTAAAGGCACAATTAGCCCTGAct > 1:71976/1‑300 (MQ=255) aGATGCACTTGCGCACCTAGTTGGCTAAATTGTTGAATAACAGACAGTGCCAGTTCATCATTCTCAATCAGACAACTCTCTGTCAGTTCAACATCTATAGGGCAGTATTCAAAATTGAGTTCCTGGAGAACCTGTT‑CAGGGCGGTGAAAATGGTTTGATCGGCGAGCTGACGTGCAGAAATATTTACCGCCACTCGCAGGTTTATGCCTTTATCCCGCCACTTTGCCACCTGGCGTACGACATCGAGAATCACCCAACGGCCTAAAGGCACAATTAGCCCTGACTCTTCGGCGTAGGaaa > 1:325312/1‑300 (MQ=255) cACTTGCGCACCTAGTTGGCTAAATTGTTGAATAACAGACAGTGCCAGTTCATCATTCTCAATCAGACAACTCTCTGTCAGTTCAACATCTATAGGGCAGTATTCAAAATTGAGTTCCTGGAGAACCTGTT‑CAGGGCGGTGAAAATGGTTTGATCGGCGAGCTGACGTGCAGAAATATTTACCGCCACTCGCAGGTTTATGCCTTTATCCCGCCACTTTGCCACCTGGCGTACGACATCGAGAATCACCCAACGGCCTAAAGGCACAATTAGCCCTGACTCTTCGGCGTAGGAAATGAAg > 1:257848/1‑300 (MQ=255) tGCGCACCTAGTTGGCTAAATTGTTGAATAACAGACAGTGCCAGTTCATCATTCTCAATCAGACAACTCTCTGTCAGTTCAACATCTATAGGGCAGTATTCAAAATTGAGTTCCTGGAGAACCTGTT‑CAGGGCGGTGAAAATGGTTTGATCGGCGAGCTGACGTGCAGAAATATTTACCGCCACTCGCAGGTTTATGCCTTTATCCCGCCACTTTGCCACCTGGCGTACGACATCGAGAATCACCCAACGGCCTAAAGGCACAATTAGCCCTGACTCTTCGGCGTAGGAAATGAAGTCCa > 1:715804/1‑300 (MQ=255) ccTAGTTGGCTAAATTGTTGAATAACAGACAGTGCCAGTTCATCATTCTCAATCAGACAACTCTCTGTCAGTTCAACATCTATAGGGCAGTATTCAAAATTGAGTTCCTGGAGAACCTGTT‑CAGGGCGGTGAAAATGGTTTGATCGGCGAGCTGACGTGCAGAAATATTTACCGCCACTCGCAGGTTTATGCCTTTATCCCGCCACTTTGCCACCTGGCGTACGACATCGAGAATCACCCAACGGCCTAAAGGCACAATTAGCCCTGACTCTTCGGCGTAGGAAATGAAGTCCAACGGTg > 1:69775/1‑300 (MQ=255) ttGGCTAAATTGTTGAATAACAGACAGTGCCAGTTCATCATTCTCAATCAGACAACTCTCTGTCAGTTCAACATCTATAGGGCAGTATTCAAAATTGAGTTCCTGGAGAACCTGTT‑CAGGGCGGTGAAAATGGTTTGATCGGCGAGCTGACGTGCAGAAATATTTACCGCCACTCGCAGGTTTATGCCTTTATCCCGCCACTTTGCCACCTGGCGTACGACATCGAGAATCACCCAACGGCCTAAAGGCACAATTAGCCCTGACTCTTCGGCGTAGGAAATGAAGTCCAACGGTGGAATc < 1:684381/300‑1 (MQ=255) tGGCTAAATTGTTGAATAACAGACAGTGCCAGTTCATCATTCTCAATCAGACAACTCTCTGTCAGTTCAACATCTATAGGGCAGTATTCAAAATTGAGTTCCTGGAGAACCTGTT‑CAGGGCGGTGAAAATGGTTTGATCGGCGAGCTGACGTGCAGAAATATTTACCGCCACTCGCAGGTTTATGCCTTTATCCCGCCACTTTGCCACCTGGCGTACGACATCGAGAATCACCCAACGGCCTAAAGGCACAATTAGCCCTGACTCTTCGGCGTAGGAAATGAAGTCCAACGGTGGAATCa < 1:354620/300‑1 (MQ=255) ggCTAAATTGTTGAATAACAGACAGTGCCAGTTCATCATTCTCAATCAGACAACTCTCTGTCAGTTCAACATCTATAGGGCAGTATTCAAAATTGAGTTCCTGGAGAACCTGTT‑CAGGGCGGTGAAAATGGTTTGATCGGCGAGCTGACGTGCAGAAATATTTACCGCCACTCGCAGGTTTATGCCTTTATCCCGCCACTTTGCCACCTGGCGTACGACATCGAGAATCACCCAACGGCCTAAAGGCACAATTAGCCCTGACTCTTCGGCGTAGGAAATGAAGTCCAACGGTGGAATCaa > 1:601094/1‑300 (MQ=255) ttgttgAATAACAGACAGTGCCAGTTCATCATTCTCAATCAGACAACTCTCTGTCAGTTCAACATCTATAGGGCAGTATTCAAAATTGAGTTCCTGGAGAACCTGTT‑CAGGGCGGTGAAAATGGTTTGATCGGCGAGCTGACGTGCAGAAATATTTACCGCCACTCGCAGGTTTATGCCTTTATCCCGCCACTTTGCCACCTGGCGTACGACATCGAGAATCACCCAACGGCCTAAAGGCACAATTATCCCTGACTCTTCGGCGTAGGGACTGAAGTCCAACGGTGGAATCCACCCACGt > 2:121996/1‑300 (MQ=255) gttgAATAACAGACAGTGCCAGTTCATCATTCTCAATCAGACAACTCTCTGTCAGTNCAACATCTATAGGGCAGTATTCAAAATTGAGTTCCTGGAGAACCTGTT‑CAGGGCGGTGAAAATGGTTTGATCGGCGAGCTGACGTGCAGAAATATTTACCGCCACTCGCAGGTTTATGCCTTTATCCCGCCACTTTGCCACCTGGCGTACGACATCGAGAATCACCCAACGGCCTAAAGGCACAATTANCCCTGAATCTTAGGCGTAGGAAATGAAGTCCAACGGTGGAATCCACCCACGtcc > 2:656872/1‑298 (MQ=255) gAATAACAGACAGTGCCAGTTCATCATTCTCAATCAGACAACTCTCTTTCAGTTCAACATCTATAGGGCAGTATTCAAAATTGAGTTCCTGGAGAACC‑GGTTCAGGGCGGTGAAAATGGTTTGATCGGCGAGNTGACGTGCAGAAATATTTACCGCCACTCGCAGGTTTATGCCTTTATCCCGCCACTTTGCCACCTGGCGTACGACATCGAGAATCACCCAACGGCCTAAAGGCACAATTAGCCCTGACTCTTCGGCGTAGGAAATGAAGTCCAACGGTGGAATCAACCCACGTTCAgg < 2:164960/300‑1 (MQ=255) aTAACAGACAGTGCCAGTTCATCATTCTCAATCAGACAACTCTCTGTCAGTTCAACATCTATAGTGCAGTATTCAAAATTGAGTTCCTGGAGAACCTGTT‑CAGGGCGGTGAAAATGGTTTGATCGGCGAGCTGACGTGCAGAAATATTTACCGCCACTCGCAGGTTTATGCCTTTATCCCGCCACTTTGCCACCTGGCGTACGACATCGAGAATCACCCAACGGCCTAAAGGCACAATTAGCCCTGACTCTTCGGCGTAGGAAATGAAGTCCAACGGTGGAATCAACCCACGTTCAGGTg < 1:533581/300‑1 (MQ=255) aTAACAGACAGTGCCAGTTCATCATTCTCAATCAGACAACTCTCTGTCAGTTCAACATCTATAGGGCAGTATTCAAAATTGAGTTCCTGGAGAACCTGTT‑CAGGGCGGTGAAAATGGTTTGATCGGCGAGCTGACGTGCAGAAATATTTACCGCCACTCGCAGGTTTATGCCTTTATCCCGCCACTTTGCCACCTGGCGTACGACATCGAGAATCACCCAACGGCCTAAAGGCACAATTAGCCCTGACTCTTCGGCGTAGGAAATGAAGTCCAACGGTGGAATCAACCCACGTTCAGGTg > 1:433541/1‑300 (MQ=255) aTAACAGACAGTGCCAGTTCATCATTCTCAATCAGACAACTCTCTGTCAGTTCAACATCTATAGGGCAGTATTCAAAATTGAGTTCCTGGAGAACCTGTT‑CAGGGCGGTGAAAATGGTTTGATCGGCGAGCTGACGTGCAGAAATATTTACCGCCACTCGCAGGTTTATGCCTTTATCCCGCCACTTTGCCACCTGGCGTACGAAATAGAGAATCACCCAACGGCCTAAAGGCACAATTAGCCCTGACTCTTAGGCGTAGGGAATGAAGTACAACGGTGGAATCAACCCACGTTCAAGTg > 2:215195/1‑300 (MQ=255) aTAACAGACAGTGCCAGTTCATCATTCTCAATCAGACAACTCTCTGTCAGTTCAACATCTATAGGGCAGTATTCAAAATTGACTTCCTGGAGAACCTGTT‑CAGGGCGGTGAAAATGGTTTGATCGGCGAGCTGACGTGCAGAAATATTTACCGCCACTCGCAGGTTTATGCCTTTATCCCGCCACTTTGCCACCTGGCGTACGACATCGAGAATCACCCAACGGCCTAAAGGCACAATTAGCCCTGACTCTTCGGCGTAGGAAATGAAGTCCAACGGTGGAATCAACCCACGTTCAGGTg < 2:616877/300‑1 (MQ=255) gacagTGCCAGTTCATCATTCTCAATCAGACAACTCTCTGTCAGTTCAACATCTATAGGGCAGTATTCAAAATTGAGTTCCTGGAGAACCTGTT‑CAGGGCGGTGAAAATGGTTTGATCGGCGAGCTGACGTGCAGAAATATTTACCGCCACTCGCAGGTTTATGCCTTTATCCCGCCACTTTGCCACCTGGCGTACGACATCGAGAATCACCCAACGGCCTAAAGGCACAATTAGCCCTGACTCTTCGGCGTAGGAAATGAAGTCCAACGGTGGAATCAACCCACGTTCAGGTGACTGcc > 1:361492/1‑300 (MQ=255) gTGCCAGTTCATCATTCTCAATCAGACAACTCTCTGTCAGTTCAACATCTATAGGGCAGTATTCAAAATTGAGTTCCTGGAGAACCTGTT‑CAGGGCGGTGAAAATGGTTTGATCGGCGAGCTGACGTGCAGAAATATTTACCGCCACTCGCAGGTTTATGCCTTTATNCCGCCACTTTGCCACCTGGCGTACGACATCGAGAATCACCCAACGGCCTAAAGGCACAATTAGCCCTGACTCTTCGGCGTAGGAAATGAAGGCCAACAGCGGAATCAACCCACGTTCAGGTGAATGCCAACg > 2:156202/1‑300 (MQ=255) gTGCCAGTTCATCATTCTCAATCAGACAACTCTCTGTCAGTTCAACATCTATAGGGCAGTATTCAAAATTGAGTTCCTGGAGAACCTGTT‑CAGGGCGGTGAAAATGGTTTGATCGGCGAGCTGACGTGCAGAAATATTTACCGCCACTCGCAGGTTTATGCCTTTATCCCGCCACTTTGCCACCTGGCGTACGACATCGAGAATCACCCAACGGCCTAAAGGCACAATTAGCCCTGACTCTTCGGCGTAGGAAATGAAGTCCAACGGTGGAATCAACCCACGTTCCGGTGACTGCCAACg > 2:696457/1‑300 (MQ=255) gTGCCAGTTCATCATTCTCAATCAGACAACTCTCTGTCAGTTCAACATCTATAGGGCAGTATTCAAAATTGAGTTCCTGGAGAACCTGTT‑CAGGGCGGTGAAAATGGTTTGATCGGCGAGCTGACGTGCAGAAATATTTACCGCCACTCGCAGGTTTATGCCTTTATCCCGCCACTTTGCCACCTGGCGTACGACATCGAGAATCACCCAACGGCCTAAAGGCACAATTAGCCCTGACTCTTCGGCGTAGGAAATGAAGTCCAACGGTGGAATCAACCCACGTTCAGGTGACTGCCAACg > 1:425735/1‑300 (MQ=255) tcgtcatTCTCAATCAGACAACTCTCTGTCAGTTCAACATCTATAGGGCAGTATTCAAAATTGAGTTCCTGGAGAACCTGTT‑CAGGGCGGTGAAAATGGTTTGATCGGCGAGCTGACGTGCAGAAATATTTACCGCCACTCGCAGGTTTATGCCTTTATCCCGCCACTTTGCCACCTGGCGTACGACATCGAGAATCACCCAACGGCCTAAAGGCACGATTAGCCCTGACTCTTCGGCGTAGGAAATGAAGTCCAACGGTGGAATCAACCAACGTTCAGGTGACTGCCAACGTACTAGTg > 2:74140/4‑300 (MQ=255) tcatcaTTCTCAATCAGACAACTCTCTGTCAGTTCAACATCTATAGGGCAGTATTCAAAATTGAGTTCCTGGAGAACCTGTT‑CAGGGCGGTGAAAATGGTTTGATCGGCGAGCTGACGTGCAGAAATATTTACCGCCACTCGCAGGTTTATGCCTTTATCCCGCCACTTTGCCACCTGGCGTACGACATCGAGAATCACCCAACGGCCTAAAGGCACAATTAGCCCTGACTCTTCGGCGTAGGAAATGAAGTCCAACGGTGGAATCAACCCACGTTCAGGTGACTGCCAACGTACTAGTg < 2:557741/300‑1 (MQ=255) tcatcaTTCTCAATCAGACAACTCTCTGTCAGTTCAACAGCTATAGGGCAGTATTCAAAATTGAGTTCCTGGAGAACCTGTT‑CAGGGCGGTGAAAATGGTTTGATCGGCGAGCTGACGTGCAGAAATATTTACCGCCACTCGCAGGTTTATGCCTTTATCCCGCCACTTTGCCACCTGGCGTACGACATCGAGAATCACCCAACGGCCTAAAGGCACAATTAGCCCTGACTCTTCGGCGTAGGAAATGAAGTCCAACGGTGGAATCAACCCACGTTCAGGTGACTGCCAACGTACTAGTg < 2:604021/300‑1 (MQ=255) tcAATCAGACAACTCTCTGTCAGTTCAACATCTATAGGGCAGTATTCAAAATTGNGTTCCTGGAGAACCTGTT‑CAGGGCGGTGAAAATGGTTTGATCGGCGAGCTGACGTGCAGAAATATTTACCGCCACTCGCAGGTTTATGCCTTTATCCCGCCACTTTGCCACCTGGCGTACGACATCGAGAATCACCCAACGGCCTAAAGGCACAATTAGCCCTGACTCTTCGGCGTAGGAAATGAAGTNCAACGGTGGAATCAACCCACGTTCAGGTGACTGCCAACGTACTAGTGCTTCCAGAc < 2:659431/300‑1 (MQ=255) tcAATCAGACAACTCTCTGTCAGTTCAACATCTATAGGGCAGTATTCAAAATTGAGTTCCTGGAGAACCTGTT‑CAGGGCGGTGAAAATGGTTTGATCGGCGAGCTGACGTGCAGAAATATTTACCGCCACTCGCAGGTTTATGCCTTTATCCCGCCACTTTGCCACCTGGCGTACGACATCGAGAATCACCCAACGGCCTAAAGGCACAATTAGCCCTGACTCTTCGGCGTAGGAAATGAAGTCCAACGGTGGAATCAACCCACGTTCAGGTGACTGCCAACGTACTAGTGCTTCCAGAc < 2:12666/300‑1 (MQ=255) gagacaggACAACTCTCTGTCAGTTCAACATCTATAGGGCAGTATTCAAAATTGAGTTCCTGGAGAACCTGTT‑CAGGGCGGTGAAAATGGTTTGATCGGCGAGCTGACGTGCAGAAATATTTACCGCCACTCGCAGGTTTATGCCTTTATCCCGCCACTTTGCCACCTGGCGTACGACATCGAGAATCACCCAACGGCCTAAAGGCACAATTAGCCCTGACTCTTCGGCGTAGGAAATGAAGTCCAACGGTGGAATCAACCCACGTTCAGGTGACTGCCAACGTACTAGTGCTTCCAGAc < 1:327042/293‑1 (MQ=255) cAATCAGACAACTCTCTGTCAGTTCAACATCTATAGGGCAGTATTCAAAATTGAGTTCCTGGAGAACCTGTT‑CAGGGCGGTGAAAATGGTTTGATCGGCGAGCTGACGTGCAGAAATATTTACCGCCACTCGCAGGTTTATGCCTTTATCCCGCCACTTTGCCACCTGGCGTACGACATCGAGAATCACCCAACGGCCTAAAGGCACAATTAGCCCTGACTCTTCGGCGTAGGAAATGAAGTCCAACGGTGGAATCAACCCACGTTCAGGTGACTGCCAACGTACTAGTGCTTCCAGACt > 1:273195/1‑300 (MQ=255) cAGACAACTCTCTTTCAGTTCAACATCTATAGGGCAGTATTCAAAATTGAGTTCCTGGAGAACCTGTT‑CAGGGCGGTGAAAATGGTTTGATCGGCGAGCTGACGTGCAGAAATATTTACCGCCACTCGCAGGTTTATGCCTTTATCCCGCCACTTTGCCACCTGGCGTACGACATCGAGAATCACCCAACGGCCTAAAGGCACAATTAGCCCTGACTCTTCGGCGTAGGAAATGAAGTCCAACGGTGGAATCAACCCACGTTCAGGTGACTGCCAACGTACTAGTGCTTCCAGACTgcgc < 2:378452/300‑1 (MQ=255) aGACAACTCTCTGTCAGTTCAACATCTATAGGGAAGTATTCAAAATTGAGTTCCTGGAGAACCTGTT‑CAGGGCGGTGAAAATGGTTTGATCGGCGAGCTGACGTGCCGAAATATTTACCGCCACTCGCAGGTTTATGCCTTTATCCCGCCACTTTGCCACCTGGCGTACGACATCGAGAATCACCCAACGGCCTAAAGGCACAATTAGCCCTGACTCTTAGGCGTAGGAAATGAAGTCCAACGGTGGAATCAAACCACATTCAGGTGACCGCCAACGTACTAGTGGTTACAGACTgcgta > 2:140838/1‑298 (MQ=255) gACAACTCTCTGTCAGTTCAACATCTATAGGGCAGTATTCAAAATTGAGTTCCTGGAGAACCTGTT‑CAGGGCGGTGAAAATGGTTTGATCGGCGAGCTGACGTGCAGAAATATTTACCGCCACTCGCAGGTTTATGCCTTTATCCCGCCACTTTGCCACCTGGCGTACGACATCGAGAATCACCCAACGGCCTAAAGGCACAATTAGCCCTGACTCTTCGGCGTAGGAAATGAAGTCCAACGGTGGAATCAACCCACGTTCAGGTGACTGCCAACGTACTAGTGCTTCCAGAcctgtctc > 2:324529/1‑293 (MQ=255) tGTCAGTTCAACATCTATAGGGCAGTATTCAAAATTGAGTTCCTGGAGAACCTGTT‑CAGGGCGGTGAAAATGGTTTGATCGGCGAGCTGACGTGCAGAAATATTTACCGCCACTCGCAGGTTTATGCCTTTATCCCGCCACTTTGCCACCTGGCGTACGACATCGAGAATCACCCAACGGCCTAAAGGCACAATTAGCCCTGACTCTTCGGCGTAGGAAATGAAGTCCAACGGTGGAATCAACCCACGTTCAGGTGACTGCCAACGTACTAGTGCTTCCAGACTGCGCACTTcgccacgc < 1:605217/300‑1 (MQ=255) cATCTATAGGGCAGTATTCAAAATTGAGTTCCTGGAGAACCTGTT‑CAGGGCGGTGAAAATGGTTTGATCGGCGAGCTGACGTGCAGAAATATTTACCGCCACTCGCAGGTTTATGCCTTTATCCCGCCACTTTGCCACCTGGCGTACGACATCGAGAATCACCCAACGGCCTAAAGGCACAATTAGCCCTGACTCTTCGGCGTAGGAAATGAAGTCCAACGGTGGAATCAACCCACGTTCAGGTGACTGCCAACGTACTAGTGCTTCCCGGCTGCGCACTTAGCCACGCAAGGTGAtttt > 2:241166/1‑300 (MQ=255) gCAGTATTCAAAATTGAGTTCCTGGAGAACCTGTT‑CAGGGCGGTGAAAATGGTTTGATCGGCGAGCTGACGTGCAGAAATATTTACCGCCACGCGCAGGTTTATGCCTTTATCCCGCCACTTTGCCACCTGGCGTACGACAGCGAGAATCACCCAACGGCCTAAAGGCACAATTAGCCCTGACTCTTCGGCGTAGGAAATGAAGTCCAACGGTGGAATCAACCCACGTTCAGGTGACTGCCAACGTACTAGTGCTTCCAGACTGCGCACTTCGCCACGCCAGGTGATTTTCGGTTGATAg < 2:79350/300‑1 (MQ=255) gTATTCAAAATTGAGTTCCTGGAGAACCTGTT‑CAGGGCGGTGAAAATGGTTTGATCGGCGAGCTGACGTGCAGAAATATTTACCGCCACTCGCAGGTTTATGCCTTTATCCCGCCACTTTGCCACCTGGCGTACGACATCGAGAATCACCCAACGGCCTAAAGGCACAATTAGCCCTGACTCTTCGGCGTAGGAAATGAAGTCCAACGGTGGAATCAACCCCCGTTCAGGTGACTGCCAACGTACTAGTGCTTCCAGACTGCGCACTTCGCCACGCCAGGTGATTTTCGGTTGATAGTGa > 1:277830/1‑300 (MQ=255) aTTGAGTTCCTGGAGAACCTGTT‑CAGGGCGGTGAAAATGGTTTGATCGGCGAGCTGACGTGCAGAAATATTTACCGCCACTCGCAGGTTTATGCCTTTATCCCGCCACTTTGCCACCTGGCGTACGACATCGAGAATCACCCAACGGCCTAAAGGCACAATTAGCCCTGACTCTTCGGCGTAGGAAATGAAGTCCAACGGTGGAATCAACCCACGTTCAGGTGACTGCCAACGTACTAGTGCTTCCAGACTGCGCACTTCGCCACGCCAGGTGATTTTCGGTTGATAGTGAATAACCAAc < 1:103871/300‑1 (MQ=255) tGAGTTCCTTGAGAACCTGTT‑CAGGGCGGTGGAAATGGTTTGATCGGCGAGCTGACGTGCAGAAATATTTACCGCCACTCGCAGGGTTATGCCTTTATCCCGCCACTTTGCCACCTGGCGTACGACATCGAGAATCACCCAACGGCCTAAAGGCACAATTAGCCCTGACTCTTCGGCGTAGGAAATGAAGTCCAACGGTGGAATCAACCCACGTTCAGGTGACTGCCAACGTACTAGTGCTTCCAGACTGCGCACTTCGCCACGCCAGGTGATTTTCGGTTGATAGTGAATAACCAACTg < 2:195720/300‑1 (MQ=255) gagaACCTGTT‑CAGGGCGGTGAAAATGGTTTGATCGGCGAGCTGACGTGCAGAAATATTTACCGCCACTCGCAGGTTTATGCCTTTATCCCGCCACTTTGCCACCTGGCNTACGACATCGAGAATCACCCAACGGCCTAAAGGCACAATTAGCCCTGACTCTTCGGCGTAGGAAATGAAGTCCAACGGTGGAATCAACCCACGTTCAGGTGACTGCCAACGTACTAGTGCTTCCAGACTGCGCACTTCGCCACGCCAGGTGATTTTCGGTTGATAGTGAATAACCAACTGATCGTTTTcc < 1:518952/300‑1 (MQ=255) aaCCTGTT‑CAGGGCGGTGAAAATGGTTTGATCGGCGAGCTGACGTGCAGAAATATTNACCGCCACTCGCAGGTTTATGCCTTTATCCCGCCACTTTGCCACCTGGCGTACGACATCGAGAATCACCCAACGGCCTAAAGGCACAATTAGCCCTGACTCTTCGGCGTAGGAAATGAAGTCCAACGGTGGAATCAACCCACGTTCAGGTGACTGCCAACGTACTAGTGCTTCCAGACTGCGCACTTCNCCACGCCAGGTGATTTTCGGTTGATAGTGAATAACCAACTGATCGTTTTCCAGt > 2:671572/1‑300 (MQ=255) cctgttCAGGTCGGTGAAAATGGTTTGATCGGCGAGCTGACGTGCAGAAATATTTACCGCCACTCGCAGGTTTATGCCTTTATCCCGCCACTTTGCCACCTGGCGGACGACATCGAGAATCACCCAACGGCCTAAAGGCACAATTAGCCCTGACTCTTCGGCGTAGGAAATGAAGTCCAACGGTGGAATCAACCCACGTTCAGGTGACTGCCAACGTACTAGTGCTTCCAGACTGCGCACTTCGCCACGCCAGGTGATTTTCGGTTGATAGTGAATAACCAACTGATCGTTTTCCAGTGc < 1:411627/296‑1 (MQ=255) gttCAGGGCGGTGAAAATGGTTTGATCGGCGAGCTGACGTGCAGAAATATTTACCGCCACTCGCAGGTTTATGCCTTTATCCCGCCACTTTGCCACCTGGCGTACGACATCGAGAATCAACCAACGGCCTAAAGGCACAATTAGCCCTGACTCTTCGGCGTAGGAAATGAAGTCCAACGGTGGAATCAACCCACGTTCAGGTGACTGCCAACGTACTAGTGCTTCCAGACTGCGCACTTCGCCACGCCAGGTGATTTTCGGTTGATAGTGAATAACCAACTGATCGTTTTCCAGTGCttt > 1:161321/2‑300 (MQ=255) | TTCAATGCCTGGGCCACAGCGACGATCGCCCGGACCAGTGACTGCGAGACAGGTTGTTTGTGAATATCTCGAACAAAAACCTGGTCAAGTTTGATGGCATCGATCGGAAAGCGCGCCAGTTGCGAAAGTGAAGAGTAGCCGGTACCAAAATCATCCAGATGCACTTGCGCACCTAGTTGGCTAAATTGTTGAATAACAGACAGTGCCAGTTCATCATTCTCAATCAGACAACTCTCTGTCAGTTCAACATCTATAGGGCAGTATTCAAAATTGAGTTCCTGGAGAACCTGTTTCAGGGCGGTGAAAATGGTTTGATCGGCGAGCTGACGTGCAGAAATATTTACCGCCACTCGCAGGTTTATGCCTTTATCCCGCCACTTTGCCACCTGGCGTACGACATCGAGAATCACCCAACGGCCTAAAGGCACAATTAGCCCTGACTCTTCGGCGTAGGAAATGAAGTCCAACGGTGGAATCAACCCACGTTCAGGTGACTGCCAACGTACTAGTGCTTCCAGACTGCGCACTTCGCCACGCCAGGTGATTTTCGGTTGATAGTGAATAACCAACTGATCGTTTTCCAGTGCTTT > NC_000913/1344911‑1345500 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |