New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 781222	51 (0.540)	5 (0.070)	5/446	6.8	10.5%	noncoding (76/76 nt)	lysY	tRNA‑Lys
	?	NC_000913	781653 =	47 (0.660)					intergenic (+1/‑432)	lysQ/nadA	tRNA‑Lys/quinolinate synthase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

AACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCA‑T‑CAC‑CCACCACTCGGGTCGTTAGCTCAGTTGGT‑AGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGT‑TTTA‑ACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACG‑ACCCACCAATCTTAAAGATTGGCCCCGAGT‑AAA‑AATCTTTCAGGTAACAC‑CCGTATGGGTCGTTAGCTCAGTTGGT‑AGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGT  >  NC_000913/780924‑781519                                                                                                                                                                                                                                                                                                               |                                                                                                                                                                                                                                                                                                                 aaCATCGAAGACAGGGGTTAAGCGTGTGGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTTTAGTATCCAGCCCAGTATCGGTTGATTAGCCCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGGGCGATCCTTTTAGTGTACGCTAAGA‑T‑GTGT‑ATGAGCTAAGTTGGT‑AGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAg                                                                                                                                                                                                                                                                                                                 <  1:68399/300‑1 (MQ=21)                             ggATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTCTCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGCGGGGGCCGGCGGTTCGATCCCGTCA‑C‑CAC‑CCACCACTCGGGTCGTTAGCTTAGTTGGT‑AGAGCAGTTGACTTTTAACCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGT‑TTTC‑ACATCAAACTCAGCTGTTAAgtg                                                                                                                                                                                                                                                                                   >  2:29530/1‑298 (MQ=21)                             ggATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGTACCTCCCTTACAAGTAGGGGGTCGGCGGTTCGATCCCGTCA‑T‑CAA‑CCACCACTCGGGTCGTTAGCTCAGTTGGT‑AGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGT‑TTTA‑ACGTCaaagcaggatgttaggtg                                                                                                                                                                                                                                                                                   >  2:80749/1‑285 (MQ=21)                                                     ccGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCA‑T‑CAC‑CCACCACTCGGGTCGTTAGCTCAGTTGGT‑AGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGT‑TTTA‑ACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCaa                                                                                                                                                                                                                                                           >  1:712564/1‑300 (MQ=255)                                                         aGGGCGAGCGAAGCGAGTCATCCTGCACTACCCACCACTAATGACGGTGGGTTCGGGGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCA‑T‑CAC‑CCACCACTCGGGTCGTTAGCTCAGTTGGT‑AGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGT‑TTTA‑ACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGc                                                                                                                                                                                                                                                       <  1:253729/300‑1 (MQ=255)                                                                         gTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCA‑T‑CAC‑CCACCACTCGGGTCGTTAGCTCAGTTGGT‑AGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGT‑TTCA‑AAATCAAACTCAGAGGTTAAGTGTGACGGCTAACGTTGCGCCAGCAACGGCCCGTAGGGCGagcgaa                                                                                                                                                                                                                                       >  1:189073/1‑300 (MQ=255)                                                                                      aCCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCA‑T‑CAC‑CCACCACTCGGGTCGTTAGCTCAGTTGGT‑AGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGT‑TTTA‑ACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATcccg                                                                                                                                                                                                                          >  1:92684/1‑298 (MQ=255)                                                                                      aCCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCA‑T‑CAC‑CCACCACTCGGGTCGTTAGCTCAGTTGGT‑AGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGT‑TGTA‑ACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTg                                                                                                                                                                                                                          >  2:463244/1‑300 (MQ=255)                                                                                                         gggTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCA‑T‑CAC‑CCACCACTCGGGTCGTTAGCTCAGTTGGT‑AGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGT‑TTTA‑AAATCAAACTCAGATGTTCAGCGTGAAGGACAACGTTGCGCCAGCAACGGCCCGTAAGGCGAGCGAAGCGCGTCATCCTGCACG‑AACCACCAATCTTaa                                                                                                                                                                                                      >  2:40191/1‑300 (MQ=255)                                                                                                           gTTCGGGGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCA‑T‑CAC‑CCACCACTCGGGTCGTTAGCTCAGTTGGT‑AGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGT‑TTTA‑ACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACG‑ACCCACCAATCTTAAAg                                                                                                                                                                                                    <  1:38640/300‑1 (MQ=255)                                                                                                                        agtTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCA‑T‑CAC‑CCACCACTCGGGTCGTTAGCTCAGTTGGT‑AGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGT‑TTTA‑ACATCCAACTCAGATGTTACTCGTGAATGCTCACGTTGCGCAAGCAGCGGCCCATAGAGCGAGCGAAGCGGGTTATCCTGCACG‑AACCAACAATCTTAACGATTGGCCCCGAGt                                                                                                                                                                                       >  1:485610/1‑300 (MQ=14)                                                                                                                        agtTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCA‑T‑CAC‑CCACCACTCGGGTCGTTAGCTCAGTTGGT‑AGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGT‑TTTA‑ACATCAAACTCAGATGTTAATCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACG‑ACCCACCAATCTTAAAGATTGGCCCCGAGt                                                                                                                                                                                       >  1:617022/1‑300 (MQ=255)                                                                                                                                  aTCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCA‑T‑CAC‑CCACCACTCGGGTCGTTAGCTCAGTTGGT‑AGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGT‑TTTA‑ACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACG‑ACCCACCAATCTTAAAGATTGGCACCGAGT‑AAA‑CATCtgt                                                                                                                                                                           >  1:14262/1‑298 (MQ=255)                                                                                                                                       gcgtaGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCA‑T‑CAC‑CCACCACTCGGGTCGTTAGCTCAGTTGGT‑AGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAAT‑TTTA‑ACATCAACCTCAGACGTTAAGCGTGAAGGATAAAGTTGCGCCAGCACAGACCCGTAGGACGAGCGAAGCGAGTCATCCTTCCCG‑ACCCACCCATCTTAAAGATTTGCAACGAGT‑AAA‑AATCTCTCAGGt                                                                                                                                                                      >  1:631878/5‑300 (MQ=14)                                                                                                                                         gtaGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCA‑T‑CAC‑CCACCAC‑CGGGTCGTTAGCTCAGTTGGT‑CGAGCAGTTGACTTTTCATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGT‑TTTC‑ACATTAAAACCAGATGTTAAACGTGAAGGACAACGTTGCGTCAGACACGGACCGTAGGGAGAGCGAAGCGAGTCCTCCTTCACG‑ACCCACCAATCTTAAAGGTTGGACCCGAGT‑AAA‑AATCTTTTAGGTAac                                                                                                                                                                   >  2:723309/3‑300 (MQ=14)                                                                                                                                            gggttggtgaatgagctaagtggggaaagaaCCTCCCTGAAAAGGGGGGGGTCGAGGGTTAGATCCAGTCA‑T‑‑AA‑CCAACAATCGGGTCGTTAGCTCAGTTGGT‑AGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGT‑TTTA‑ACATCGAATACAGATGTTAAGCGTGGAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACG‑ACCCACCAATCTTAAAGATTGGCCCCGAGT‑AAA‑AATCTTTCAGGTAACAc‑c                                                                                                                                                               <  1:66088/270‑1 (MQ=14)                                                                                                                                            gTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCA‑T‑CAC‑CCACCACTCGGGTCGTTAGCTCAGTTGGT‑AGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGT‑TTTA‑ACATCAAACTCAGATGTTAAGCGTGAAGGGTGACGTTGCGCCAGCAACGGCACGTAGGGCGAGCGAAGCGAGTAATCCTGCACG‑AACCACCAATCTTAAAGACTGGCACCGAGT‑AGA‑CATTTTTCATGTAacac                                                                                                                                                                 >  1:96131/1‑300 (MQ=14)                                                                                                                                                cGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCA‑T‑CAC‑CCACCACTCGGGTCGTTAGCTCAGTTGGT‑AGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGT‑TTTA‑ACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACG‑AACCACCAATCTTAAAGATTGGCCCAGAGT‑AAA‑AATCTTTCAGGTAACAC‑CCGt                                                                                                                                                            >  1:234918/1‑300 (MQ=255)                                                                                                                                                  ggtggtTAGCTCAGTTGGGGGAACACCTCCCTTACAAGGGGGGGGTCGGCCGGTCGATCCCTTCA‑C‑CAC‑CCACCACTCTGGTCGTTAGCTCAGTTGGT‑AGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGT‑TTTA‑ACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACG‑ACCCACCAATCTTAAAGATTGGCCCCGAGT‑AAA‑AATCTTTCAGGTAACAC‑CCGTAt                                                                                                                                                          <  1:334899/300‑1 (MQ=18)                                                                                                                                                       gtAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTTGATCCCTTCA‑T‑CAC‑CCACCACTCGGGTCGTTAGCTCAGTTGGT‑AGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGT‑TTTA‑ACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACG‑ACCCACCAATCTTAAAGATTGGCCCCGAGT‑AAA‑AATCTTTCAGGTAACAC‑CCGTATGGGTc                                                                                                                                                     <  1:185766/299‑1 (MQ=255)                                                                                                                                                               gCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCA‑T‑CAC‑CCACCACTCGGGTCGTTAGCTCAGTTGGT‑AGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGT‑TTTA‑ACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCAAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACG‑CCCCACCAACCTTACCGACTAACCCCAAAT‑AAA‑AATCTTTCAggcggcaacagtataggcttctagctc                                                                                                                                              >  2:419808/1‑275 (MQ=14)                                                                                                                                                                    gaaagCACCTCCCCTACAAGGAGGGGGTCGGCGGTTCGATCCCTTCA‑T‑CAC‑CCACCACTCGGGTCGTTAGCTCAGTTGTT‑AGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGT‑TTTA‑ACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACG‑ACCCACCAATCTTAAAGATTGGCCCCGAGT‑AAA‑AATCTTTCAGGTAACAC‑CCGTATGGGTCGTTAGCTCAGTTg                                                                                                                                        <  1:166395/297‑1 (MQ=255)                                                                                                                                                                           ccTCCCTTACAATGAGGTGGTCGGCGGTTCGATCCCGTCA‑C‑CAC‑CCACCACTCTGGTCGTTAGCTTAGTTGGT‑AGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGT‑TTTA‑ACATCAAATTCAGATGTTAAGCGTTAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACG‑ACCCACCAACCTTAAAGATTGGCCCCGATT‑AAA‑AATCTTTCAGTTAACAC‑CCGTATGGGTCGTTAGCTCAGTTGGT‑AGAGc                                                                                                                                <  2:30561/300‑1 (MQ=18)                                                                                                                                                                           ccTCCCTTACAAGGAGTGGGTCGGCGGGTCGATCCCGTCA‑T‑CAC‑CCACCACTCGGGTCGTTAGCTCAGTTGGT‑AGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGT‑TTTA‑ACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACG‑ACCCACCAATCTTAAAGATTGGCCCCGAGT‑AAA‑AACCTTTCAGGTAACAC‑CCGTATGGGTCGTTAGCTCAGTTGGT‑AGAGc                                                                                                                                <  1:512733/300‑1 (MQ=255)                                                                                                                                                                           ccTCCATTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCA‑T‑CAC‑CCACCACTCGGGTCGTTAGCTCAGTTGGT‑AGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGT‑TTTA‑ACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGCACCC‑CCACTCCTCAAGCTTGGAACCGAGC‑AGA‑AATCTGTAAGGTAACAC‑CCGTCTATGTCGTTGGCTCTGTGGGT‑agcac                                                                                                                                >  2:384431/1‑297 (MQ=14)                                                                                                                                                                              cccTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCA‑T‑CAC‑CCACCACTCGGGTCGTTAGCTCAGTTGGT‑AGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTTCCCGACCCCCCATC‑TCTA‑AAATCACAATCAGATGCCAATCACGACGACCACCGCTTCGCCCACACCTCCCCGTCAGACGCACAACGCAAGTCATCCTGCACG‑ACCCACCAATCTTAAAGATTGGCCCAGAGT‑AAA‑AATCTTTCAGGTAACAC‑CCGGATGGGGCGTTAGCTCAGTTGGT‑AGagtagt                                                                                                                             >  2:683698/1‑300 (MQ=9)                                                                                                                                                                              cccTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCA‑T‑CAC‑CCACCACTCGGGTCGTTAGCTCAGTTGGT‑AGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGT‑TTTA‑ACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCACGTAGGGCGAGCGAAGAGAGTAATCCTGCACG‑ACCCACCAATCTTAAAGATTGGCACCGAGT‑AAA‑AATCTTTCAGGTAACAC‑CCGTCTGGGTCGTTAGATCAGTTGGT‑CGAGCAGt                                                                                                                             >  1:633527/1‑300 (MQ=255)                                                                                                                                                                                                    ggTTCGATCCCGTCA‑T‑CAC‑CCACCACTCGGGTCGTTAGCTCAGTTGGT‑AGAGCAGTTGACTTTTAAGCAATTGGTCGCAGGTGCGAATCCGGCGTGACCTGTAGGT‑TTTAGAGGT‑GGATGCGGGTTGGAAGCGTTAAGGATAACGTTGCGTTGGTGATGGCTCGTAGGGCGAGTGAAGTGAGTCAGCCGGTAGG‑ACACATCAATTGTAAGGAGGGGCTCTGAGG‑GGA‑AATCCTTTAGGTAACAA‑CCGTATGGGTCGTTAGCTCAGTTGGT‑AGAGCAGTTGACTTTTAATCAATTGGTCGc                                                                                                       <  1:644562/300‑1 (MQ=2)                                                                                                                                                                                                         gATCCCGTCA‑C‑CAC‑CCACCACTCGGGTCGTTAGCTCAGTGGGT‑AGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGT‑TTTA‑ACATNAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACG‑ACCCACCAATCTTAAAGAGTGGTCCCGAGG‑AAA‑AATCTTTCAGGTAACAC‑CCGTATGGGGCGTTAGCTCAGTTGGT‑AGAGCAGTTGACTTTTAATCAAGTGGTCGCAGGtt                                                                                                  <  1:545529/300‑1 (MQ=255)                                                                                                                                                                                                               ccttcctccc‑ccaccA‑TCGGGTCGTTAGCTCA‑TTGGTTAGAGCAGTTGATTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGT‑TTTA‑ACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCTTAGGGCGAGCGAAGCGAGTCATCCTGCACG‑ACCCACCAATCTTAAAGATTGGCCCCGAGT‑AAA‑AATCTTTCAGGTAACAC‑CCGTATGGGTCGTTAGCTCAGTTGGT‑AGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAAt                                                                                             <  2:755655/291‑1 (MQ=25)                                                                                                                                                                                                                   tcaccaaccaacacTCGGGTCGTTAGCTCAGTTGGT‑AGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCGGCACGACCCACCAGT‑TTTA‑ACATCAAACGCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACG‑ACCCACCAATCTTAAAGATTGGCCCCGAGT‑AAA‑AATCCTTCAGGTAACAC‑CCGTACGGGTCGTTAGCTCAGTTGGT‑AGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATcc                                                                                           <  2:285821/289‑1 (MQ=255)                                                                                                                                                                                                                        c‑ccaccACTCGGGTCGTTAGCTCAGTTGGT‑AGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGT‑TTTA‑ACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCACGTAGGGCGAGTGAAGCGAGTAATCCTGCACA‑AACCAACAATCTTAAAGATTGAACCCGAGT‑AAA‑AACCTTTCAGGTAACAC‑CCGTATGGGTCGTTAGCTTAGTTGGT‑AGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCAct                                                                                     >  1:274491/1‑299 (MQ=25)                                                                                                                                                                                                                        c‑ccaccACTCGGGTCGTTAGCTCAGTTGGT‑AGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAAT‑TTCA‑ACATTAACCTCAGATGTTAAGCTTGAAGGCTAACGTTGCGCCAACAACAGCACATAGGGCGAGCGAAGCGGGTCCTCCTTCACG‑ACCCACCAATCTTAAAGATTAACCCCAAGT‑AAA‑AACCTTCCAGGTACCAC‑CCCTACAGGTCCTTAGCTCNGTCGGT‑ATAGCATCTGAATTTTATTCCATTGGTCGCAGGTTctcaccntgaacg                                                                                     >  2:638141/1‑288 (MQ=12)                                                                                                                                                                                                                                     gTCGTTAGCTCAGTTGGT‑AGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGT‑TTTA‑ACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACG‑ACCCACCAATCTTAAAGATTGGCCCCGAGT‑AAA‑CCTTTTTCAGGTCACAC‑CCGTATGGGTCGTTAGTTCAGTTGGT‑AGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAAtgt                                                                         >  1:245235/1‑298 (MQ=255)                                                                                                                                                                                                                                          tAGCTCAGTTGGT‑AGAGCAGTTTACTTTTAATCAATGGGTCGCAGGTTCGAATCCTGCACGACCCACCGGT‑TTTG‑ATGTCAAGTGCAGAGGGGAAGCGGTAAGGAGAACGTTGCGTTGGCGAAGGCACTTAGGGAGAGTGAGGTGAGTCACCCTGTGCG‑ACCAACCAATCTGAAAGAGTGGCTTCG‑GTGAGG‑AAGCTTTTGGGTAACAC‑ACTGATGGGTCGTTAGCTCAGTTGGT‑AGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAgg                                                                    <  1:378577/300‑1 (MQ=9)                                                                                                                                                                                                                                                 gTTGGT‑AGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGT‑TTTA‑ACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACG‑ACCCCCCAATCTTAAAGATTGGCACCGAGT‑AAA‑ACTCTTTCAGGTAACAC‑CCGTCTGGGTCGTTAGCTCCGTTGGT‑AGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGAACCACCAATTTAAAGGTGGTTAc                                                             >  2:484444/1‑300 (MQ=255)                                                                                                                                                                                                                                                   cggT‑AGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGT‑TTTA‑ACATCAACCTCAGATGCTACTTGTGAAGGATCACGTTGCGCCAACACTGGCACGTAGGGCGAGCGAAGCGCGTTCTCCTGCACG‑AACCACCAATCTTCACAATTGGACCCGAGT‑AAA‑AATCTTTCAGGTCCCAC‑GCTTATAGGTCGTTAGCTCATTTGGT‑AGAGTCGTTGACTTTTAATCAATTGGTTGGAGGTTCGAATCCTGCAAGACCCACAAATGTaacgatgtttcctg                                                           >  2:396570/2‑288 (MQ=16)                                                                                                                                                                                                                                                     gT‑AGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGT‑TTTA‑ACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACG‑ACCCACCAATCTTAAAAATCGGCCCCGAGT‑AAA‑AATCTTTCAGGTAACAC‑CCGTATGGGTCGTTAGCTCAGTTGGT‑AGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGt                                                         >  1:574064/1‑300 (MQ=255)                                                                                                                                                                                                                                                      ttatagCAGTTAACCTTTAACCGATTGTTCGCAGGTTCGAATCCTGCACGACCCACCAGT‑TGTA‑ACATCGAACGCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACG‑ACCCACCAATTTTAAAGATTGGCCCCGAGT‑AAA‑AATCTTTCAGGTAACAC‑CCGTAGGGGTCTTTAGCCCAGTTGGT‑AGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGt                                                         <  1:270134/296‑1 (MQ=25)                                                                                                                                                                                                                                                          agCAGTTTACTGTTAATCAATTTGTCGCAGTTTCGAGTCCTGCACCACCCACCAGT‑TTTA‑ACATCAAGTTCATATGTTAAGCGTTGAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACG‑ACCCACCAATCTTAAAGAGTGGCCCCGAGT‑AAA‑AATCCTTCAGGTAACAC‑CCGTATGGGTCGTTAGCTCAGTTGGT‑AGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTagag                                                     <  2:83736/300‑1 (MQ=37)                                                                                                                                                                                                                                                          agCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGT‑TTTA‑ACATCAAACTCAGATGTTAATCGTGAAGGATAACGTTGCGCCAGCAACGGCCCNTAGGGCGAGCGAAGCGAGTCATCCTGCACG‑ACCCACCAATCTTAAAGATTGGCCCCGAGT‑ANA‑AATCTTTCAGGTAACAC‑CCGTATGGGTCGTTAGCTCAGTTGGT‑AGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTagag                                                     <  2:602219/300‑1 (MQ=255)                                                                                                                                                                                                                                                            cagcttaCTTTTAATCAATGGGGCGAAGGGGCGAACCATGCACGACCCACC‑GTCGTCA‑ACATCAAACGAAGATATTAAGCTTTAAGTATAGCGTGGCCCCAGCAACGTCCCTTAGGGCGAGCGGAGTGAGTCNGCCTGTACG‑ACCCACCACCCTTAAAGAGTGGCTCCGGTT‑GGA‑AATCCTTCAGGTAACAC‑CCGGATGGGTCGTTAGCTCAGTTGGT‑AGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGaa                                                   <  2:174048/294‑1 (MQ=12)                                                                                                                                                                                                                                                                   cTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGT‑TTTA‑ACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACG‑ACCCACCAATCTTAAAGATTGGCCCCGAGT‑AAA‑AATCTTTCAGGTAACAC‑CCGTATGGGTCGTTAGCTCAGTTGGT‑AGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAg                                            <  1:29713/300‑1 (MQ=255)                                                                                                                                                                                                                                                                         atcacttgttcacagtttCGAATCCCGCACGACCCACCATT‑TTTA‑ACAGCAAACTCAGATGTTAAGCGTGAAGGATAACGGTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGGCATTTTGCACG‑ACCCACCAATCGTAAAGAGGGGCTCCGAGG‑AAA‑AATCTTTTAGGTAACAC‑CCGTATGGGTCGTTAGCTCAGTTGGT‑AGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAAc                                      <  2:21892/284‑1 (MQ=37)                                                                                                                                                                                                                                                                           cAATTGTTCGCAATTTCGAATCCTGCACGACCCACCAGT‑TTTA‑ACATCAAACCCAGATTTTAAGCGGGGAGGATGACGTTGCGCCAGCAACGGCCCTTAGGGCGGGCGAAGCGAGGCATCCTGTACG‑ACCCACCAATCTTAAAGAGTGGTCTCGAGT‑AGA‑AATCTTTCAGGTAACAC‑CCGTATGGGTCGTTAGCTCAGTTGGT‑AGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGt                                    <  2:144494/300‑1 (MQ=37)                                                                                                                                                                                                                                                                           cAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGT‑TTTA‑ACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACG‑ACCCACCAATCTTAAAGATTGGCCCCGAGT‑AAA‑AATCTTTCAGGTAACAC‑CCGTATGGGTCGTTAGCTCAGTTGGT‑AGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGt                                    <  1:741956/300‑1 (MQ=255)                                                                                                                                                                                                                                                                           cAATTGGTCGCAGGTTCGAATCCGGCACGACCCACCATT‑TTTA‑ACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGTCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACG‑ACCCACCAATCTTAAAGATTGGCCCCTAGT‑AAA‑ACTCCTTCAATTAACAC‑CCGTATGGGTCGTTAGCTCAGT‑GATGAGAGCACTCGGTGGTTAATCAATGGGTAGCAGGTGCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGt                                    <  1:665353/300‑1 (MQ=21)                                                                                                                                                                                                                                                                                    gCAGATTCGAATCCTGCACGACCCACCAGT‑TTTA‑ACATCAAACTCAGACGTTAAGCGTGAAGGATAACGCTTCGCCAGCAACGCCCCTTAGGGCGAGCGAAGCGAGTCATCCTGCACG‑ACCCACCAATCTTCCCCATGGGCTCTGAGG‑GGGGTAT‑AGTAAACAGACACACCG‑CCGGGTCGTTAGCTCAGTTGGT‑AGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGc                           <  1:336734/300‑1 (MQ=16)                                                                                                                                                                                                                                                                                                        aCCCACCAGT‑TTTA‑ACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACG‑ACCCACCAATCTTAAAGATTGGCCCCGAGT‑AAA‑AATCTTTCAGGTAACAC‑CCGTATGGGTCGTTAGCTCAGTTGGT‑AGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGAc       <  1:682137/300‑1 (MQ=255)                                                                                                                                                                                                                                                                                                        aCCCACCAGT‑TTTA‑ACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACG‑ACCCACCAATCTCAAAGATTGGCCCCACGT‑AAA‑CATCTCTCAGGTCACCC‑CAGTATAGGTCATTAGGTCCGTTGGT‑AGGTCAGGTGCCCTTTAATCAATTGGTCGCGGGTTCGAATCCTGCACGAACCAAAAAGGGAGAGGGGGTGACTGGGAGAGAGCGTGAAGGATAACGTCGCGTTAGCAATGGTACGAAGGGAGAGAc       >  2:582045/1‑300 (MQ=16)                                                                                                                                                                                                                                                                                                             ccaGT‑TTTA‑ACATCAAACTCAGATGTTAAGCGTGGAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACG‑ACCCACCAATCTTAAAGATTGGCCCCGAGT‑AAA‑AATCTTTCAGGTAACAC‑CCGTATGGGTCGTTAGCTCAGTTGGT‑AGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGt  <  1:629516/300‑1 (MQ=255)                                                                                                                                                                                                                                                                                                               |                                                                                                                                                                                                                                                                                                                 AACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCA‑T‑CAC‑CCACCACTCGGGTCGTTAGCTCAGTTGGT‑AGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGT‑TTTA‑ACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACG‑ACCCACCAATCTTAAAGATTGGCCCCGAGT‑AAA‑AATCTTTCAGGTAACAC‑CCGTATGGGTCGTTAGCTCAGTTGGT‑AGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGT  >  NC_000913/780924‑781519

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.