Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,507,136 G→A C119Y (TGC→TAC)  rlhA → 23S rRNA 5‑hydroxycytidine C2501 synthase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,507,1360GA100.0% 231.4 / NA 64C119Y (TGC→TAC) rlhA23S rRNA 5‑hydroxycytidine C2501 synthase
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (31/33);  total (31/33)

CGCGAAGCTATTTTGCACGGTGCCGATGCTGTTTATATCGGCGGCCCTGGTTTTGGTGCCCGTCATAATGCCAGTAATAGCTTGAAAGATATTGCCGAGCTGGTGCCGTTTGCCCATCGTTATGGTGCAAAAATTTTCGTCACGCTTAACACCATTTTGCATGATGATGAGCTGGAACCCGCGCAACGGCTGATTACTGACCTCTACCAGACCGGTGTCGATGCGCTGATTGTTCAGGATATGGGGATTCTGGAACTTGATATTCCGCCGATTGAACTGCACGCCAGTACGCAGTGCGACATTCGTACAGTTGAAAAAGCGAAGTTCCTCTCTGATGTTGGCTTCACGCAGATTGTGCTGGCGCGAGAGCTGAATCTTGATCAGATCCGCGCGATTCACCAGGCTACGGACGCGACCATTGAATTCTTTATTCATGGGGCACTGTGCGTGGCCTATTCGGGTCAGTGCTACATTTCTCATGCGCAAACAGGGCGTAGCGCCAACCGTGGCGATTGCTCGCAGGCGTGCCGTTTGCCATACACATTGAAAGACGATCAGGGGCGGGTGGTTTCCTATGAAAAAC  >  NC_000913/1506841‑1507423
                                                                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                                                                               
cgcgAAGCTATTTTGCACGGTGCCGATGCTGTTTATATCGGCGGCCCTGGTTTTGGTGCCCGTCATAATGCCAGTAATAGCTTGAAAGATATTGCCGAGCTGGTGCCGTTTGCCCATCGTTATGGTGCAAAAATTTTCGTCACGCTTAACACCATTTTGCATGATGATGAGCTGGAACCCGCGCAACGGCTGATTACTGACCTCTACCAGACCGGTGTCGATGCGCTGATTGTTCAGGATATGGGGATTCTGGAACTTGATATTCCGCCGATTGAACTGCACGCCAGTACGCAGTACGAc                                                                                                                                                                                                                                                                                             <  1:439680/300‑1 (MQ=255)
  cgAAGCTATTTTGCACGGTGCCGATGCTGTTTATATCGGCGGCCCTGGTTTTGGTGCCCGTCATAATGCCAGTAATAGCTTGAAAGATATTGCCGAGCTGGTGCCGTTTGCCCATCGTTATGGTGCAAAAATTTTCGTCACGCTTAACACCATTTTGCATGATGATGAGCTGGAACCCGCGCAACGGCTGATTACTGACCTCTACCAGACCGGTGTCGATGCGCTGATTGTTCAGGATATGGGGATTCTGGAACTTGATATTCCGCCGATTGAACTGCACGCCAGTACGCAGTACGACAt                                                                                                                                                                                                                                                                                           <  1:744040/300‑1 (MQ=255)
         aTTTTGCACGGTGCCGATGCTGTTTATATCGGCGGCCCTGGTTTTGGTGCCCGTCATAATGCCAGTAATAGCTTGAAAGATATTGCCGAGCTGGTGCCGTTTGCCCATCGTTATGGTGCAAAAATTTTCGTCACGCTTAACACCATTTTGCATGATGATGAGCTGGAACCCGCGCAACGGCTGATTACTGACCTCTACCAGACCGGTGTCGATGCGCTGATTGTTCAGGATATGGGGATTCTGGAACTTGATATTCCGCCGATTGAACTGCACGCCAGTACGCAGTACGACATTCGTACa                                                                                                                                                                                                                                                                                    >  1:350948/1‑300 (MQ=255)
                   gTGCCGATGCTGTTTATATCGGCGGCCCTGGTTTTGGTGCCCGTCATAATGCCAGTAATAGCTTGAAAGATATTGCCGAGCTGGTGCCGTTTGCCCATCGTTATGGTGCAAAAATTTTCGTCACNCTTAACACCATTTTGCATGATGATGAGCTGGAACCCGCGCAACGGCTGATTACTGACCTCTNCCAGACCGGTGTCGATGCGCTGATTGTTCAGGATATGGGGATTCTGGAACTTGATATTCCGCCGATTGAACTGCACGCCAGTACGCAGTACGAAATTCGTACAGTTGAAAAAg                                                                                                                                                                                                                                                                          >  2:641360/1‑300 (MQ=255)
                   gTGCCGATGCTGTTTATATCGGCGGCCCTGGTTTTGGTGCCCGTCATAATGCCAGTAATAGCTTGAAAGATATTGCCGAGCTGGTGCCGTTTGCCCATCGTTATGGTGCAAAAATTTTCGTCACGCTTAACACCATTTTGCATGATGATGAGCTGGAACCCGCGCAACGGCTGATTACTGCCCTCTACCAGACCGGTGTCGATGCGCTGATTGTTCAGGATATGGGGATTCTGGAACTTGATATTCCGCCGATTGAACTGCACGCCAGTACGCAGTACGACATTCGTACAGTTGAAAAAg                                                                                                                                                                                                                                                                          >  1:611043/1‑300 (MQ=255)
                   gTGCCGATGCTGTTTATATCGGCGGCCCTGGTTTTGGTGCCCGTCATAATGCCAGTAATAGCTTGAAAGATATTGCCGAGCTGGTGCCGTTTGCCCATCGTTATGGTGCAAAAATTTTCGTCACGCTTAACACCATTTTGCATGATGATGAGCTGGAACCCGCGCAACGGCTGATTACTGACCTCTACCAGACCGGTGTCGATGCGCTGATTGTTCAGGATATGGGGATTCTGGAACTTGATATTCCGCCGATTGAACTGCACGCCAGTACGCAGTACGACATTCGTACAGTTGAAAAAg                                                                                                                                                                                                                                                                          >  1:195795/1‑300 (MQ=255)
                   gTGCCGATGCTGTTTATATCGGCGGCCCTGGTTTTGGTGCCCGTCATAATGCCAGTAATAGCTTGAAAGATATTGCCGAGCTGGTGCCGTTTGCCCATCGTTATGGTGCAAAAATTTTCGTCACGCTTAACACCATTTTGCATGATGATGAGCTGGAACCCGCGCAACGGCTGATTACTGACCTCTAACAGACCGGTGTCGATGCGCTGATTGTTCAGGATATGGGGATTCTGGAACTTGATATTCCGCCGATTGAACTGCACGCCAGTACGCAGTACGACATTCGTACAGTTGAAAAAg                                                                                                                                                                                                                                                                          >  1:63143/1‑300 (MQ=255)
                      ccGATGCTGTTTATATCGGCGGCCCTGGTTTTGGTGCCCGTCATAATGCCAGTAATAGCTTGAAAGATATTGCCGAGCTGGTGCCGTTTGCCCATCGTTATGGTGCAAAAATTTTCGTCACGCTTAACACCATTTTGCATGATGATGAGCTGGAACCCGCGCAACGGCTGATTACTGACCTCTACCAGACCGGTGTCGATGCGCTGATTGTTCAGGATATGGGGATTCTGGAACTTGATATTCCGCCGATTGAACTGCACGCCAGTACGCAGTACGACATTCGTACAGTTGAAAAAGCGa                                                                                                                                                                                                                                                                       >  1:128930/1‑300 (MQ=255)
                              gTTTATATCGGCGGCCCTGGTTTTGGTGCCCGTCATAATGCCAGTAATAGCTTGAAAGATATTGCCGAGCTGGTGCCGTTTGCCCATCGTTATGGTGCAAAAATTTTCGTCACGCTTAACACCATTTTGCATGATGATGAGCTGGAACCCGCGCAACGGCTGATTACTGACCTCTACCAGACCGGTGTCGATGCGCTGATTGTTCAGGATATGGGGATTCTGGAACTTGATATTCCGCCGATTGANCTGCACGCCAGTACGCAGTACGACATTCGTACAGTTGAAAAAGCGAAGTTCctc                                                                                                                                                                                                                                                               >  2:606572/1‑300 (MQ=255)
                              gTTTATATCGGCGGCCCTGGTTTTGGTGCCCGTCATAATGCCAGTAATAGCTTGAAAGATATTGCCGAGCTGGTGCCGTTTGCCCATCGTTATGGTGCAAAAATTTTCGTCACGCTTAACACCATTTTGCATGATGATGAGCTGGAACCCGCGCAACGGCTGATTACTGACCTCTACCAGACCGGTGTCGATGCGCTGATTGTTCAGGATATGGGGATTCTGGAACTTGATATTCCGCCGATTGAACTGCACGCCAGTACGCAGTACGACATTCGTACAGTTGAAAAAGCGAAGTTCctc                                                                                                                                                                                                                                                               >  1:303256/1‑300 (MQ=255)
                                     tCGGCGGCCCTGGTTTTGGTGCCCGTCATAATGCCAGTAATAGCTTGAAAGATATTGCCGAGCTGGTGCCGTTTGCCCATCGTTATGGTGCAAAAATTTTCGTCACGCTTAACACCATTTTGCATGATGATGAGCTGGAACCCGCGCAACGGCTGATTACTGACCTCTACCAGACCGGTGTCGATGCGCTGATTGTTCAGGATATGGGGATTCTGGAACTTGATATTCCGCCGATTGAACTGCACGCCAGTACGCAGTACGACATTCGTACAGTTGAAAAAGCGAAGTTCCTCTCTGATg                                                                                                                                                                                                                                                        <  1:395869/300‑1 (MQ=255)
                                                              tCATAATGCCAGTAATAGCTTGAAAGATATTGCCGAGCTGGTGCCGTTTGCCCATCGTTATGGTGCAAAAATTTTCGTCACGCTTAACACCATTTTGCATGATGATGAGCTGGAACCCGCGCAACGGCTGATTACTGACCTCTACCAGACCGGTGTCGATGCGCTGATTGTTCAGGATATGGGGATTCTGGAACTTGATATTCCGCCGATTGAACTGCACGCCAGTACGCAGTACGACATTCGTACAGTTGAAAAAGCGAAGTTCCTCTCTGATGTTGGCTTCACGCAGATTGTGCTGgc                                                                                                                                                                                                                               >  2:767417/1‑300 (MQ=255)
                                                              tCATAATGCCAGTAATAGCTTGAAAGATATTGCCGAGCTGGTGCCGTTTGCCCATCGTTATGGTGCAAAAATTTTCGTCACGCTTAACACCATTTTGCATGATGATGAGCTGGAACCCGCGCAACGGCTGATTACTGACCTCTACCAGACCGGTGTCGATGCGCTGATTGTTCAGGATATGGGGATTCTGGAACTTGATATTCCGCCGATTGAACTGCACGCCAGTACGCAGTACGACATTCGTACAGTTGAAAAAGCGAAGTTCCTCTCTGATGTTGGCTTCACGCAGATTGTGCTGgc                                                                                                                                                                                                                               >  1:479406/1‑300 (MQ=255)
                                                               cATAATGCCAGTAATAGCTTGAAAGATATTGCCGAGCTGGTGCCGTTTGCCCATCGTTATGGTGCAAAAATTTTCGTCACGCTTAACACCATTTTGCATGATGATGAGCTGGAACCCGCGCAACGGCTGATTACTGACCTCTACCAGACCGGTGTCGATGCGCTGATTGTTCAGGATATGTGGATTCTGGAACTTGATATTCCGCCGATTGAACTGCACGCCAGTACGCAGTACGACATTCGTACAGTTGAAAAAGCGAAGTTCCTCTCTGATGTTGGCTTCACGCAGATTGTGTTGgcg                                                                                                                                                                                                                              <  2:165745/300‑1 (MQ=255)
                                                                                  tgaaaaatcccgCCGGGCTGGTGCCGTTTGCTCATCGTTATGGTGCAAAAATTTTCTTCACGCTTAACACCATTTTACATGATGATGAGCTGGAGCCCGCGCGACGGCTAATTACTGACCCCTACCAGACCCGTATCTATGCGCTGATTATTCAGGATATGTGGATTCGGGGATTTGATATTCCGCCGATTGAACTGCACGCCAGTACGCAGTACGACATTCGTACAGTTGAAAAAGCGAAGTTCCTCTCTGATGTTTGCTCCACGCAGATTGTGCTCGCGCGAGAGCTGAATCTTGATc                                                                                                                                                                                                           <  2:399586/289‑1 (MQ=255)
                                                                                  tGAAAGATATTGCCGAGCTGGTGCCGTTTGCCCATCGTTATGGTGCAAAAATTTTCGTCACGCTTAACACCATTTTGCATGATGATGAGCTGGAACCCGCGCAACGGCTGATTACTGACCTCTACCAGACCGGTGTCGATGCGCTGATTGTTCAGGATATGGGGATTCTGGAACTTGATATTCCGCCGATTGAACTGCACGCCAGTACGCAGTACGACATTCGTACAGTTGAAAAAGCGAAGTTCCTCTCTGATGTTGGCTTCACGCAGATTGTGCTGGCGCGAGAGCTGAATCTTGATc                                                                                                                                                                                                           <  1:410363/300‑1 (MQ=255)
                                                                                      aGATATTGCCGAGCTGGTGCCGTTTGCCCATCGTTATGGTGCAAAAATTTTCGTCACGCTTAACACCATTTTGCATGATGATGAGCTGGAACCCGCGCAACGGCTGATTACTGACCTCTACCAGACCGGTGTCGATGCGCTGATTGTTCAGGATATGGGGATTCTGGAACTTGATATTCCGCCGATTGAACTGCACGCCAGTACGCAGTACGACATTCGTACAGTTGAAAAAGCGAAGTTCCTCTCTGATGTTGGCTTCACGCAGATTGTGCTGGCGCGAGAGCTGAATCTTGATCAGAt                                                                                                                                                                                                       >  2:361538/1‑300 (MQ=255)
                                                                                        atatTGCCGAGCTGGTGCCGTTTGCCCATCGTTATGGTGCAAAAATTTTCGTCACGCTTAACACCATTTTGCATGATGATGAGCTGGAACCCGCGCAACGGCTGATTACTGACCTCTACCAGACCGGTGTCGATGCGCTGATTGTTCAGGATATGGGGATTCTGGAACTTGATATTCCGCCGATTGAACTGCACGCCAGTACGCAGTACGACATTCGTACAGTTGAAAAAGCGAAGTTCCTCTCTGATGTTGGCTTCACGCAGATTGTGCTGGCGCGAGAGCTGAATCTTGATCAGATcc                                                                                                                                                                                                     >  2:474375/1‑300 (MQ=255)
                                                                                                 aGCTGGTGCCGTTTGCCCATCGTTATGGTGCAAAAATTTTCGTCACGCTTAACACCATTTTGCATGATGATGAGCTGGAACCCGCGCAACGGCTGATTACTGACCTCTACCAGACCGGTGTCGATGCGCTGATTGTTCAGGATATGGGGATTCTGGAACTTGATATTCCGCCGATTGAACTGCACGCCAGTACGCAGTACGACATTCGTACAGTTGAAAAAGCGAAGTTCCTCTCTGATGTTGGCTTCACGCAGATTGTGCTGGCGCGAGAGCTGAATCTTGATCAGATCCGCGCGATTc                                                                                                                                                                                            <  1:498768/300‑1 (MQ=255)
                                                                                                 aGCTGGTGCCGTTTGCCCATCGTTATGGTGCAAAAATTTTCGTCACGCTTAACACCATTTTGCATGATGATGAGCTGGAACCCGCGCAACGGCTGATTACTGACCTCTACCAGACCGGTGTCGATGCGCTGATTGTTCAGGATATGGGGATTCTGGAACTTGATATTCCGCCGATTGAACTGCACGCCAGTACGCAGTACGACATTCGTACAGTTGAAAAAGCGAAGTTCCTATATGATGTTGGCTTCACGCAGATTGTGCTGGCGCGAGAGCTGAATCTTGATCAGATCCGCGCGATTc                                                                                                                                                                                            >  1:428547/1‑300 (MQ=255)
                                                                                                      gTGCCGTTTGCCCATCGTTATGGTGCAAAAATTTTCGTCACGCTTAACACCATTTTGCATGATGATGAGCTGGAACCCGCGCAACGGCTGATTACTGACCTCTACCAGACCGGTGTCGATGCGCTGATTGTTCAGGATATGGGGATTCNGGAACTTGATATTCCGCCGATTGAACNGCACGCCAGTACGCAGTACGACATTCGTACAGTTGAAAAAGCGAAGTTCCTCTCTGATGTTGGCTTCACGCAGATTGTGCTGGCGCGAGAGCTGAATCTTGATCAGATCCGCGCGATTCACCAg                                                                                                                                                                                       <  2:537867/300‑1 (MQ=255)
                                                                                                        gCCGTTTGCCCATCGTTATGGTGCAAAAATTTTCGTCACGCTTAACACCATTTTGCATGATGATGAGCTGGAACCCGCGCAACGGCTGATTACTGACCTCTACCAGACCGGTGTCGATGCGCTGATTGTTCAGGATATGGGGATTCTGGAACTTGATATTCCGCCGATTGAACTGCACGCCAGTACGCAGTACGACATTCGTACAGTTGAAAAAGCGAAGTTCCTCTCTGATGTTGGCTTCACGCAGATTGTGCTGGCGCGAGAGCTGAATCTTGATCAGATCCGCGCGATTCACCAGGc                                                                                                                                                                                     <  1:59418/300‑1 (MQ=255)
                                                                                                              tGCCCATCGTTATGGTGCAAAAATTTTCGTCACGCTTAACCCCATTTTGCATGATGATGAGCTGGAACCCGCGCAACGGCTGCTTACTGACCTCTACCAGACCGGTGTCGATGCGCTGATTGTTCAGGATATGGGGATTCTGGAACTTGATATTCCGCCGATTGAACTGCACGCCAGTACGCAGTACGACATTCGTACAGTTGAAAAAGCGAAGTTCCTCTCTGATGTTGGCTTCACGCAGATTGTGCTGGCGCGAGAGCTGAATCTTGATCAGATCCGCGCGATTCACCAGGCTACGGa                                                                                                                                                                               <  2:697822/300‑1 (MQ=255)
                                                                                                              tGCCCATCGTTATGGTGCAAAAATTTTCGTCACGCTTAACACCATTTTGCATGATGATGAGCTGGAACCCGCGCAACGGCTGATTACTGACCTCTACCAGACCGGTGTCGATGCGCTGATTGTTCAGGATATGGGGATTCTGGAACTTGATATTCCGCCGATTGAACTGCACGCCAGTACGCAGTACGACATTCGTACAGTTGAAAAAGCGAAGTTCCTCTCTGATGTTGGCTTCACGCAGATTGTGCTGGCGCGAGAGCTGAATCTTGATCAGATCCGCGCGATTCACCAGGCTACGGa                                                                                                                                                                               <  1:454754/300‑1 (MQ=255)
                                                                                                                cccATCGTTATTGTGCAAAAATTTTCGTCACGCTTAACACCATTTTGCATGATGATGAGCTGGAACCCGCGCAACGGCTGATTACTGACCTCTACCAGACCGGTGNCGATGCGCTGATTGTTCAGGATATGGGGATTCTGGAACTTGAGATTCCGCCGATTGAACTGCACGCCAGTACGCAGTACGACATTCGTACAGTTGAAAAAGCGAAGTTCCTCTCTGATGTTGGCTTCACTCAGATTGTGCTGGCGCGAGAGCTGAATCTTGATCAGATCCGCGCGATTCACCAGGCTACGGAcg                                                                                                                                                                             <  2:710116/300‑1 (MQ=255)
                                                                                                                cccATCGTTATGGTGCAAAAATTTTCGTCACGCTTAACACCATTTTGCATGATGATGAGCTGGAACCCGCGCAACGGCTGATTACTGACCTCTACCAGACCGGTGNCGATGCGCTGATTGTTCAGGATATGGGGATTCTGGAACTTGATATTCCGCCGATTGAACTGCACGCCAGTACGCAGTACGACATTCGTACAGTTGAAAAAGCGAAGTTCCTCTCTGATGTTGGCTTCACGCAGATTGTGCTGGCGCGAGAGCTGAATCTTGATCAGATCCGCGCGATTCACCAGGCTACGGAcg                                                                                                                                                                             <  2:713753/300‑1 (MQ=255)
                                                                                                                    tCGTTATGGTGCAAAAATTTTCGTCACGCTTAACACCATTTTGCATGATGATGAGCTGGAACCCGCGCAACGGCTGATTACTGACCTCTACCAGACCGGTGTCGATGCGCTGATTGTTCAGGATATGGGGATTCTGGAACTTGATATTCCGCCGATTGAACTGCACGCCAGTACGCAGTACGACATTCGTACAGTTGAAAAAGCGAAGTTCCTATCTGATGTTGGCTTCACGCAGATTGTGCTGGCGCGAGAGCTGAATCTTGATCAGATCCGCGCGATTCACCAGGCTACGGACGCGAc                                                                                                                                                                         >  2:284804/1‑300 (MQ=255)
                                                                                                                    tCGTTATGGTGCAAAAATTTTCGTCACGCTTAACACCATTTTGCATGATGATGAGCCGGAACCCGCGCAACGGCTGATTACTGACCTCTACCAGACCGGTGTCGATGCGCTGATTGTTCAGGATATGGGGATTCTGGAACTTGATATTCCGCCGATTGAACTGCACGCCAGTACGCAGTACGACATTCGTACAGTTGAAAAAGCGAAGTTCCTCTCTGATGTTGGCTTCACGCAGATTGTGCTGGCGCGAGAGCTGAATCTTGATCAGATCCGCGCGATTCACCAGGCTACGGACGCGAc                                                                                                                                                                         >  2:727734/1‑300 (MQ=255)
                                                                                                                                             aCGCTTAACACCATTTTGCATGATGATGAGCTGGAACCCGCGCAACGGCTGATTACTGACCTCTACCAGACCGGTGTCGATGCGCTGATTGTTCAGGATATGGGGATTCTGGAACTTGATATTCCGCCGATTGAACTGCACGCCAGTACGCAGTACGACATTCGTACAGTTGAAAAAGCGAAGTTCCTCTCTGATGTTGGCTTCACGCAGATTGTGCTGGCGCGAGAGCTGAATCTTGATCAGATCCGCGCGATTCACCAGGCTACGGACGCGACCATTGAATTCTTTATTCATGGGGCa                                                                                                                                                >  2:164292/1‑300 (MQ=255)
                                                                                                                                                    acacCATTTTGCATGATGATGAGCTGGAACCCGCGCAACGGCTGATTACTGACCTCTACCAGACCGGTGTCGATGCGCTGATTGTTCAGGATATGGGGATTCTGGAACTTGATATTCCGCCGATTGAACTGCACGCCAGTACGCAGTACGACATTCGTACAGTTGAAAAAGCGAAGTTCCTCTCTGATGTTGGCTTCACGCAGATTGTGCTGGCGCGAGAGCTGAATCTTGATCAGATCCGCGCGATTCACCAGGCTACGGACGCGACCATTGAATTCTTTATTCATGGGGCACTGTGCg                                                                                                                                         >  1:18652/1‑300 (MQ=255)
                                                                                                                                                        cATTTTGCATGATGATGAGCTGGAACCCGCGCAACGGCTGATTACTGACCTCTANCAGACCGGTGTCGATGCGCTGATTGTTCAGGATATGGGGATTCTGGAACTTGATATTCCGCCGATTGAACTGCACGCCAGTACGCAGTACGACATTCGTACAGTTGAAAAAGCGAAGTTCCTCTCTGATGTTGGCTTCACGCAGATTGTGCTGGCGCGAGAGCTGAATCTTGATCAGATCCGCGCGATTCACCAGGCTACGGACGCGACCATTGAATTCTTTATTCATGGGGCACTGTGCGTGGc                                                                                                                                     <  2:593897/300‑1 (MQ=255)
                                                                                                                                                        cATTTTGCATGATGATGAGCTGGAACCCGCGCAACGGCTGATTACTGACCTCTACCAGACCGGTGTCGATGCGCTGATTGTTCAGGATATGGGGATTCTGGAACTTGATATTCCGCCGATTGAACTGCACGCCAGTACGCAGTACGACCTTCGTACAGTTGAAAAAGCGAAGTTCNTCTCTGATGTTGGCTTCACGCAGATTGTGCTGGCGCGAGAGCTGAATCTTGATCAGATCCGCGCGATTCACCAGGCTACGGACGCGACCATTNAATTCTTTATTCATGGGGCACTGTGCGTGGc                                                                                                                                     <  2:561709/300‑1 (MQ=255)
                                                                                                                                                        cATTTTGCATGATGATGAGCTGGAACCCGCGCAACGGCTGATTACTGACCTCTACCAGACCGGTGTCGATGCGCTGATTGTTCAGGATATGGGGATTCTGGAACTTGATATTCCGCCGATTGAACTGCACGCCAGTACGCAGTACGACATTCGTACAGTTGAAAAAGCGAAGTTCCTCTCTGATGTTGGCTTCACGCAGATTGTGCTGGCGCGAGAGCTGAATCTTGATCAGATCCGCGCGATTCACCAGGCTACGGACGCGACCATTGAATTCTTTATTCATGGGGCACTGTGCGTGGc                                                                                                                                     <  1:452084/300‑1 (MQ=255)
                                                                                                                                                              gCATGATGATGAGCTGGAACCCGCGCAACGGCTGATTACTGACCTCTACCAGACCGGTGTCGATGCGCTGATTGTTCAGGATATGGGGATTCTGGAACTTGATATTCCGCCGATTGAACTGCACGCCAGTACGCAGTACGACATTCGTACAGTTGAAAAAGCGAAGTTCCTCTCTNATGTTGGCTTCACGCAGATTGTGCTGGCGCGAGAGCTGAATCTTGATCAGATCCGCGCGATTCACCAGGCTACGGACGCGACCATTGAATTCNTTATTCATGGGGCACTGTGCGTGGCCTATTc                                                                                                                               <  2:561160/300‑1 (MQ=255)
                                                                                                                                                                   atgatgaGCTGGAACCCGCGCAGCGGCTGATTGCCTACCTCTACCATACTGTTGTCGATGCGCTAATTGTCCAGGATATGTGGATTCTGAAACTTGATACTCCGCCGATTGAACTGCACGCCAGTACGCAGTACGACATTCGTACAGTTGAAAAAGCGAAGGTCCTCTCTGATGGTGGCTTCACGCAGATTGTGCTGGCGCGAGAGCTGAATCTTGATCAGATCCGCGCGATTCACCAGGCTACGGACGCGACCAGTGAATCCTTTATTCATGGGGCACTGTGCGTGGCCTATTCGGGTc                                                                                                                          <  2:234594/300‑1 (MQ=255)
                                                                                                                                                                   atgatgaGCTGGAACCCGCGCAACGGCTGATTACTGACCTCTACCAGACCGGTGTCGATGCGCTGATTGTTCAGGATATGGGGATTCTGGAACTTGATATTCCGCCGATTGAACTGCACGCCAGTACGCAGTACGACATTCGTACAGTTGAAAAAGCGAAGTTCCTCTCTGATGTTGGCTTCACGCAGATTGTGCTGGCGCGAGAGCTGAATCTTGATCAGATCCGCGCGATTCACCAGGCTACGGACGCGACCATTGAATTCTTTATTCATGGGGCACTGTGCGTGGCCTATTCGGGTc                                                                                                                          <  1:25588/300‑1 (MQ=255)
                                                                                                                                                                   atgatgaGCTGGAACCCGCGCAACGGCTGATTACTGACCTCTACCAGACCGGTGTCGATGCGCTGATTGTTCAGGATATGGGGATTCTGGAACTTGATATTCCGCCGATTGAACTGCACGCCAGTACGCAGTACGACATTCGTACAGTTGAAAAAGCGAAGTTCCTCTCTGATGTTGGCTTCACGCAGATTGTGCTGGCGCGAGAGCTGAATCTTGATCAGATCCGCGCGATTCACCAGGCTACGGACGCGACCATTGAATTCTTTATTCATGGGGCACTGTGCGTGGCCTATTCGGGTc                                                                                                                          <  2:780506/300‑1 (MQ=255)
                                                                                                                                                                          gCTGGAACCCGCGCAACGGCTGATTACTGACCTCTACCAGACCGGTGTCGATGCGCTGATTGTTCAGGATATGGGGATTCTGGAACTTGATATTCCGCCGATTGAACTGCACGCCAGTACGCAGTACGACATTCGTACAGTTGAAAAAGCGAAGTTCCTCTCTGATGTTGGCTTCACGCAGATTGTGCTGGCGCGAGAGCTGAATCTTGATCAGATCCGCGCGATTCACCAGGCTACGGACGCGACCATTGAATTCTTTATTCATGGGGCACTGTGCGTGGCCTATTCGGGTCAGTGCTa                                                                                                                   >  1:645658/1‑300 (MQ=255)
                                                                                                                                                                             ggAACCCGCGTAACGGCTGAGTACTGACCTCTACCAGACCGGTGTCGATGCGCTGATTGTTCAGGATATGGGGATTCTGGAACTTGATATTCCGCCGATTGAACTGCACGCCAGTACGCAGTACGACATTCGTACAGTTGAAAAAGCGAAGTTCCTCTCGGATGTTGGCTTCACGCAGATTGTGCTGGCGCGAGAGCTGAATCTTGATCAGATCCGCGCGATTCACCAGGCTACGGACGCGACCATTGAATTCTTTATTCATGGGGCACTGTGCGTGGCCTATTCGGGTCAGTGCTACAt                                                                                                                <  2:429500/300‑1 (MQ=255)
                                                                                                                                                                             ggAACCCGCGCAACGGCTGATTACTGACCTCTACCATACCGGTGTCGATGCGCTGATTGTTCAGGATATGGTGATTCTGGAACTTGATATTCCGCCGATTGAACTGCACNCCAGTACGCAGTACGACATTCGTACAGTTGAAAAAGCGAAGTTCCTCTCTGATGTTGGCTTCACGCAGATTGTGCTGGCGCGAGAGCTGAATCTTGATCAGATCCGCGCGATTCACCAGGCTACGGACGCGACCATTGAATTCTTTATTCATGGGGCACTGTGCGTGGCCTATTCGGGTCAGTGCTACAt                                                                                                                <  1:570590/300‑1 (MQ=255)
                                                                                                                                                                             ggAACCCGCGCAACGGCTGATTACTGACCTCTACCAGACCGGTGTCGATGCGCTGATTGTTCAGGATATGGGGATTCTGGAACTTGATATTCCGCCGATTGAACTGCACNCCAGTACGCAGTACGACATTCGTACAGTTGAAAAAGCGAAGTTCCTCTCTGATGTTGGCTTCACGCAGATTGTGCTGGCGCGAGAGCTGAATCTTGATCAGATCCGCGCGATTCACCAGGCTACGGACGCGACCATTGAATTCTTTATTCATGGGGCACTGTGCGTGGCCTATTCGGGTCAGTGCTACAt                                                                                                                <  1:570195/300‑1 (MQ=255)
                                                                                                                                                                             ggAACCCGCGCAACGGCTGATTACTGACCTCTACCAGACCGGTGTCGATGCGCTGATTGTTCAGGATATGGGGATTCTGGAACTTGATATTCCGCCGATTGAACTGCACGCCAGTACGCAGTACGACATTCGTACAGTTGAAAAAGCGAAGTTCCTCTCTGATGTTGGCTTCACGCAGATTGTGCTGGCGCGAGAGCTGAATCTTGATCAGATCCGCGCGATTCACCAGGCTACGGACGCGACCATTGAATTCTTTATTCATGGGGCACTGTGCGTGGCCTATTCGGGTCAGTGCTACAt                                                                                                                <  2:737678/300‑1 (MQ=255)
                                                                                                                                                                             ggAACCCGCGCAACGGCTGATTACTGACCTCTACCAGACCGGTGTCGATGCGCTGATTGTTCAGGATATGGGGATTCTGGAACTTGATATTCCGCCGATTGAACTGCACGCCAGTACGCAGTACGACATTCGTACAGTTGAAAAAGCGAAGTTCCTCTCTGATGTTGGCTTCACGCAGATTGTGCTGGCGCGAGAGCTGAATCTTGATCAGATCCGCGCGATTCACCAGGCTACGGACGCGACCATTGAATTCTTTATTCATGGGGCACTGTGCGTGGCCTATTCGGGTCAGTGCTACAt                                                                                                                <  1:117592/300‑1 (MQ=255)
                                                                                                                                                                              gAACCCGCTCAACGGCTGATTACTTACCTCTACCAGACCGGGGTCGATGCGCTGATGGTTCAGGATATGGGGATTCTGGAACTTGATATTCCGCCGATTGAACTGCACGCCAGTACGCAGTACGACATTCGTACAGTTGAAAAAGCGAAGTTCCTCTCTGATGTTGGCTTCACGCAGATTGTGCTGGCGCGAGAGCTGAATCTTGATCAGATCCGCGCGATTCACCAGGCTACGGACGCGACCATTGAATTCTTTATTCATGGGGCACTGTGCGTGGCCTATTCGGGTCAGTGCTACAtt                                                                                                               <  2:397242/300‑1 (MQ=255)
                                                                                                                                                                                                     tGACCTCTACCAGACCGGTGTCGATGCGCTGATTGTTCAGGATATGGGGATTCTGGAACTTGATATTCCGCCGATTGAACTGCACGCCAGTACGCAGTACGACATTCGTACAGTTGAAAAAGCGAAGTTCCTCTCTGATGTTGGCTTCACGCAGATTGTGCTGGCGCGAGAGCTGAATCTTGATCAGATCCGCGCGATTCACCAGGCTACGGACGCGACCATTGAATTCTTTATTCATGGGGCACTGTGCGTGGCCTATTCGGGTCAGTGCTACAtctgtctcttatacacatctcgcag                                                                                        <  1:761017/300‑25 (MQ=255)
                                                                                                                                                                                                      gACCTCTACCAGACCGGTGTCGATGCGCTGATTGTTCAGGATGTGGGGATTCTGGAGCTTGATATTCCGCCGATTGAACTGCACGCCAGTACGCAGTACGACATTCGTACAGTTGAAAAAGCGAAGTTCCTCTCTGATGTTGGCTTCACGCAGATTGTGCTGGCGCGAGAGCTGAATCTTGATCAGATCCGCGCGATTCACCAGGCTACGGACGCGACCATTGAATTCTTTATTCATGGGGCACTGTGCGTGGCCTATTCGGGTCAGTGCTACATTTCTCATGCGCAAACAGGGCGTAgc                                                                                       >  2:773057/1‑300 (MQ=255)
                                                                                                                                                                                                      gACCTCTACCAGACCGGTGTCGATGCGCTGATTGTTCAGGATATGGGGATTCTGGAACTTGATATTCCGCCGATTGAACTGCACGCCAGTACGCAGTACGACATTCGTACAGTTGAAAAAGCGAAGTTCCTCTCTGATGTTGGCTTCACGCAGATTGTGCTGGCGCGAGAGCTGAATCTTGATCAGATCCGCGCGATTCACCAGGCTACGGACGCGACCATTGAATTCTTTATTCATGGGGCACTGTGCGTGGCCTATTCGGGTCAGTGCTACATTTCTCATGCGCAAACAGGGCGTAgc                                                                                       <  2:798463/300‑1 (MQ=255)
                                                                                                                                                                                                      gACCTCTACCAGACCGGTGTCGATGCGCTGATTGTTCAGGATATGGGGATTCTGGAACTTGATATTCCGCCGATTGAACTGCACGCCAGTACGCAGTACGACATTCGTACAGTTGAAAAAGCGAAGTTCCTCNCTGATGTTGGCTTCACGCAGATTGTGCTGGCGCGAGAGCTGAATCTTGATCAGATCCGCGCGATTCACCAGGCTACGGACGCGACCATTGAATTCTTTATTCATGGGGCACTGTGCGTGGCCTATTCGGGTCAGTGCTACATTTCTCATGCGCAAACAGGGCGTAgc                                                                                       <  2:199773/300‑1 (MQ=255)
                                                                                                                                                                                                        ccTCTACCAGACCGGTGTCGATGCGCTGATTGTTCAGGATATGGGGATTCTGGAACTTGATATTCCGCCGATTGAACTGCACGCCAGTACGCAGTACGACATTCGTACAGTTGAAAAAGCGAAGTTCCTCTCTGATGTTGGCTTCACGCAGATTGTGCTGGCGCGAGAGCTGAATCTTGATCAGATCCGCGCGATTCACCAGGCTACGGACGCGACCATTGAATTCTTTATTCATGGGGCACTGTGCGTGGCCTATTCGGGTCAGTGCTACATTTCTCATGCGCAAACAGGGCGTAgcgc                                                                                     <  1:60440/300‑1 (MQ=255)
                                                                                                                                                                                                           ctACCAGACCGGTGTCGATGCGCTGATTGTTNAGGATATGGGGATTCTGGAACTTGATATTCCGCCGATTGAACTGCACGCCAGTACGCAGTACGACATTCGTACAGTTGAAAAAGCGAAGTTCNTCTCTGATGTTGGCTTCACGCAGATTGTGCTGGCGCGAGAGCTGAATCTTGATCAGATCCGCGCGATTCACCAGGCTACGGACGCGACCATTGAATTCTTTATTCATGGGGCACTGTGCGTGGCCTATTCGGGTCAGTGCTACATTTCTCATGCGCAAACAGGGCGTAGCGCCaa                                                                                  >  2:564830/1‑300 (MQ=255)
                                                                                                                                                                                                           ctACCAGACCGGTGTCGATGCGCTGATTGTTNAGGATATGGGGATTCTGGAACTTGATATTCCGCCGATTGAACTGCACGCCAGTACGCAGTACGACATTCGTACAGTTGAAAAAGCGAAGTTCNTATATGATGTTGGCTTCACGCAGATTGTGCTGGCGCGAGAGCTGAATCTTGATCAGATCCGCGCGATTCACCAGGCTACGGACGCGACCATTGAATTCTTTATTCATGGGGCACTGTGCGTGGCCTATTCGAGTCAGTGCTACATTTCTCATGCGCAAACAGGGCGTAGCGCCaa                                                                                  >  2:564882/1‑300 (MQ=255)
                                                                                                                                                                                                           ctACCAGACCGGTGTCGATGCGCTGATTGTTCAGGATATGGGGATTCTGGAACTTGATATTCCGCCGATTGAACTGCACGCCAGTACGCAGTACGACATTCGTACAGTTGAAAAAGCGAAGTTCCTCTCTGATGTTGGCTTCACGCAGATTGTGCTGGCGCGAGAGCTGAATCTTGATCAGATCCGCGCGNTTCACCAGGCTACGGACGCGACCATTGAATTCTTTATTCATGGGGCACTGTGCGTGGCCTATTCGGGTCAGTGCTACATTTCTCATGCGCAAACAGGGCGTAGCGCCaa                                                                                  >  1:564018/1‑300 (MQ=255)
                                                                                                                                                                                                           ctACCAGACCGGTGTCGATGCGCTGATTGTTCAGGATATGGGGATTCTGGAACTTGATATTCCGCCGATTGAACTGCACGCCAGTACGCAGTACGACATTCGTACAGTTGAAAAAGCGAAGTTCCTCTCTGATGTTGGCTTCACGCAGATTGTGCTGGCGCGAGAGCTGAATCTTGATCAGATCCGCGCGATTCACCAGGCTACGGACGCGACCATTGAATTCTTTATTCATGGGGCACTGTGCGTGGCCTATTCGGGTCAGTGCTACATTTCTCATGCGCAAACAGGGCGTAGCGCCaa                                                                                  >  1:59311/1‑300 (MQ=255)
                                                                                                                                                                                                                                       gTTCAGGATATGGGGATTCTGGAACTTGATATTCCGCCGATTGAACTGCACGCCAGTACGCAGTACGACATTCGTACAGTTGAAAAAGCGAAGTTCCTCTCTGATGTTGGCTTCACGCAGATTGTGCTGGCGCGAGAGCTGAATCTTGATCAGATCCGCGCGATTCACCAGGCTACGGACGCGACCATTGAATTCTTTATTCATGGGGCACTGTGCGTGGCCTATTCGGGTCAGTGCTACATTTCTCATGCGCAAACAGGGCGTAGCGCCAACCGTGGCGATTGCTCGCAGGCGTGCCGt                                                      >  2:493968/1‑300 (MQ=255)
                                                                                                                                                                                                                                            ggATATGGGGATTCTGGAACTTGATATTCCGCCGATTGAACTGCACGCCAGTACGCAGTACGACATTCGTACAGTTGAAAAAGCGAAGTTCCTCTCTGATGTTGGCTTCACGCAGATTGTGCTGGCGCGAGAGCTGAATCTTGATCAGATCCGCGCGATTCACCAGGCTACGGACGCGACCATTGAATTCTTTATTCATGGGGCACTGTGCGTGGCCTATTCGGGTCAGTGCTACATTTCTCATGCGCAAACAGGGCGTAGCGCCAACCGTGGCGATTGCTCGCAGGCGTGCCGTTTGcc                                                 >  1:796724/1‑300 (MQ=255)
                                                                                                                                                                                                                                                atgtggATTCTGGAACTTGATATTCCGCCGATTGAACTGCACGCCAGTACGCAGTACGACATTCGTACAGTTGAAAAAGCGAAGTTCCTCTCTGATGTTGGCTTCACGCAGATTGTGCTGGCGCGAGAGCTGAATCTTGATCAGATCCGCGCGATTCACCAGGCTACGGACGCGACCATTGAATTCTTTATTCATGGGGCACTGTGCGTGGCCTATTCGGGTCAGTGCTACATTTCTCATGCGCAAACAGGGCGTAGCGCCAACCGTGGCGATTGCTCGCAGGCGTGCCGTTTGCCATac                                             <  1:617631/296‑1 (MQ=255)
                                                                                                                                                                                                                                                        tCTGGAACTTGATATTCCGCCGATTGAACTGCACGCCAGTACGCAGTACGACATTCGTACAGTTGAAAAAGCGAAGTTCCTCTCTGATGTTGGCTTCACGCAGATTGTGCTGGCGCGAGAGCTGAATCTTGATCAGATCCGCGCGATTCACCAGGCTACGGACGCGACCATTGAATTCTTTATTCATGGGGCACTGTGCGTGGCCTATTCGGGTCAGTGCTACATTTCTCATGCGCAAACAGGGCGTAGCGCCAACCGTGGCGATTGCTCGCAGGCGTGCCGTTTGCCATACACATTGaa                                     <  1:299111/300‑1 (MQ=255)
                                                                                                                                                                                                                                                                                tGAACTGCACGCCAGTACGCAGTACGACATTCGTACAGTTGAAAAAGCGAAGTTCCTCTCTGATGTTGGCTTCACGCAGATTGTGCTGGCGCGAGAGCTGAATCTTGATCAGATCCGCGCGATTCACCAGGCTACGGACGCGACCATTGAATTCTTTATTCATGGGGCACTGTGCGTGGCCTATTCGGGTCAGTGCTACATTTCTCATGCGCAAACAGGGCGTAGCGCCAACCGTGGCGATTGCTCGCAGGCGTGCCGTTTGCCATACACATTGAAAGACGATCAGGGGCGGGTGGTTTc             <  1:14937/300‑1 (MQ=255)
                                                                                                                                                                                                                                                                                 gAACTGCACGCCAGTACGCAGTACGACATTCGTACAGTTGAAAAAGCGAAGTTCCTCTCTGATGTTGGCTTCACGCAGATTGTGCTGGCGCGAGAGCTGAATCTTGATCAGATCCGCGCGATTCACCAGGCTACGGACGCGACCATTGAATTCTTTATTCATGGGGCACTGTGCGTGGCCTATTCGGGTCAGTGCTACATTTCTCATGCGCAAACAGGGCGTAGCGCCAACCGTGGCGATTGCTCGCAGGCGTGCCGTTTGCCATACACATTGAAAGACGATCAGGGGCGGGTGGTTTcc            >  1:663215/1‑300 (MQ=255)
                                                                                                                                                                                                                                                                                         cgcaaGTACGCAGTACGACATTCGTACAGTTGAAAAAGCGAAGTTCCTCTCTGATGTTGGCTTCACGCAGATTGTGCTGGCGCGAGAGCTGAATCTTGATCAGATCCGCGCGATTCACCAGGCTACGGACGCGACCATTGAATTCTTTATTCATGGGGCACTGTGCGTGGCCTATTCGGGTCAGTGCTACATTTCTCATGCGCAAACAGGGCGTAGCGCCAACCGTGGCGATTGCTCGCAGGCGTGCCGTTTGCCATACACATTGAAAGACGATCAGGGGCGGGTGGTTTCCTATGaaaa    >  2:678674/5‑300 (MQ=255)
                                                                                                                                                                                                                                                                                         cGCCAGTACGCAGTACGACATTCGTACAGTTGAAAAAGCGAAGTTCCTCTCTGATGTTGGCTTCACGCAGATTGTGCTGGCGCGAGAGCTGAATCTTGATCAGATCCGCGCGATTCACCAGGCTACGGACGCGACCATTGAATTCTTTATTCATGGGGCACTGTGCGTGGCCTATTCGGGTCAGTGCTACATTTCTCATGCGCAAACAGGGCGTAGCGCCAACCGTGGCGATTGCTCGCAGGCGTGCCGTTTGCCATACACATTGAAAGACGATCAGGGGCGGGTGGTTTCCTATGaaaa    >  1:262060/1‑300 (MQ=255)
                                                                                                                                                                                                                                                                                           ccAGTACGCAGTACGACATTCGTACAGTTGAAAAAGCGAAGTTCCTCTCTGATGTTGGCTTCACGCAGATTGTGCTGGCGCGAGAGCTGAATCTTGATCAGATCCGCGCGATTCACCAGGCTACGGACGCGACCATTGAATTCTTTATTCATGGGGCACTGTGCGTGGCCTATTCGGGTCAGTGCTACATTTCTCATGCGCAAACAGGGCGTAGCGCCAACCGTGGCGATTGCTCGCAGGCGTGCCGTTTGCCATACACATTGAAAGACGATCAGGGGCGGGTGGTTTCCTATGAAAAAc  >  1:460135/1‑300 (MQ=255)
                                                                                                                                                                                                                                                                                           ccAGTACGCAGTACGACATTCGTACAGTTGAAAAAGCGAAGTTCCTCTCTGATGTTGGCTTCACGCAGATTGTGCTGGCGCGAGAGCTGAATCTTGATCAGATCCGCGCGATTCACCAGGCTACGGACGCGACCATTGAATTCTTTATTCATGGGGCACTGTGCGTGGCCTATTCGGGTCAGTGCTACATNTCTCATGCGCAAACAGGGCGTAGCGCCAACCGTGGCGATTGCTCGCAGGCGTGCCGTTTGCCATACACATTGAAAGACGATCAGGGGCGGGTGGTTTCCTATGAAAAAc  >  1:588795/1‑300 (MQ=255)
                                                                                                                                                                                                                                                                                           ccAGTACGCAGTACGACATTCGTACAGTTGAAAAAGCGAAGTTCCTCTCTGATGTTGGCTTCACGCAGATTGTGCTGGCGCGAGAGCTGAATCTTGATCAGATCCGCGCGATTCACCAGGCTACGGACGCGACCATTGAATTCTTTATTCATGGGGCACTGTGCGTGGCATATTCGGGTCAGTGCTACATTTCTCATGCGCAAACAGGGCGTAGCGCCAACCGTGGCGATTGCTCGCAGGCGTGCCGTTTGCCATACACATTGAAAGACGATCAGGGGCGGGTGGTTTCCTATGAAAAAc  >  2:21119/1‑300 (MQ=255)
                                                                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                                                                               
CGCGAAGCTATTTTGCACGGTGCCGATGCTGTTTATATCGGCGGCCCTGGTTTTGGTGCCCGTCATAATGCCAGTAATAGCTTGAAAGATATTGCCGAGCTGGTGCCGTTTGCCCATCGTTATGGTGCAAAAATTTTCGTCACGCTTAACACCATTTTGCATGATGATGAGCTGGAACCCGCGCAACGGCTGATTACTGACCTCTACCAGACCGGTGTCGATGCGCTGATTGTTCAGGATATGGGGATTCTGGAACTTGATATTCCGCCGATTGAACTGCACGCCAGTACGCAGTGCGACATTCGTACAGTTGAAAAAGCGAAGTTCCTCTCTGATGTTGGCTTCACGCAGATTGTGCTGGCGCGAGAGCTGAATCTTGATCAGATCCGCGCGATTCACCAGGCTACGGACGCGACCATTGAATTCTTTATTCATGGGGCACTGTGCGTGGCCTATTCGGGTCAGTGCTACATTTCTCATGCGCAAACAGGGCGTAGCGCCAACCGTGGCGATTGCTCGCAGGCGTGCCGTTTGCCATACACATTGAAAGACGATCAGGGGCGGGTGGTTTCCTATGAAAAAC  >  NC_000913/1506841‑1507423

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: