BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
MC JC	NC_000913	1,397,239	Δ49,912 bp	IS5‑mediated	ynaJ–[feaR]	61 genes ynaJ, uspE, fnr, ogt, abgT, abgB, abgA, abgR, mcaS, smrA, dgcM, ynaN, zntB, fnrS, ynaL, dbpA, ttcA, intR, xisR, rcbA, ralA, ralR, recT, recE, racC, ydaE, kilR, kilS, sieB, ydaF, ydaG, racR, ydaS, ydaT, ydaU, ydaV, ydaW, rzoR, trkG, ynaK, ydaY, ynaA, lomR, insH5, lomR, stfR, tfaR, pinR, ynaE, ynaM, uspF, ompN, micC, ydbK, ydbJ, hslJ, ldhA, ydbH, ynbE, ydbL, [feaR]

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	1396261–1397243	1447150	49908–50890	32 [30]	[1] 102	[insH4]–[feaR]	[insH4],ynaJ,uspE,fnr,ogt,abgT,abgB,abgA,abgR,mcaS,smrA,dgcM,ynaN,zntB,fnrS,ynaL,dbpA,ttcA,intR,xisR,rcbA,ralA,ralR,recT,recE,racC,ydaE,kilR,kilS,sieB,ydaF,ydaG,racR,ydaS,ydaT,ydaU,ydaV,ydaW,rzoR,trkG,ynaK,ydaY,ynaA,lomR,insH5,lomR,stfR,tfaR,pinR,ynaE,ynaM,uspF,ompN,micC,ydbK,ydbJ,hslJ,ldhA,ydbH,ynbE,ydbL,[feaR]

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1397238	NA (NA)	101 (0.990)	75/598	0.1	99.0%	noncoding (1195/1195 nt)	IS5	repeat region
*	?	NC_000913	1447151 =	1 (0.010)	101 (0.990)	75/598	0.1	99.0%	coding (133/906 nt)	feaR	DNA‑binding transcriptional activator FeaR