New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	2288919 =	NA (NA)	15 (0.130)	14/598	5.7	7.9%	noncoding (1195/1195 nt)	IS5	repeat region
	?	NC_000913	= 2774956	174 (1.520)					coding (1639/1704 nt)	yfjW	uncharacterized protein YfjW
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TACAAGGGGTTGCTGAAAAACGATAACCAACTGGCGATGTTATTCACGCTGGCCAACCTGTTTCGGGCGGACCAAATGATACGTCAGTGGGAGAGATCTCACTAAAAACTGGGGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/2289169‑2288919 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTAGCAGACCTAAACCAAATATATACTTTAATATATCCATAATAGAAGAACCAAAAATTTCTAGCTTAGATTGCAAATAAGTTATTTTACGAAGGTTCATTATCTTGTTATCAACAAAAACAAGATCTGCTGTGCCATATATTTTGATTTTTTTGCTTTTATTAACTAGTCCATACAAACTCCCTTCAGAAATAATAATCTCCGATTCTGGCCTTAACGACAAATGTTTCCCGTTGATACTAAACTGGGAGATACCTGTTGCTCTCAGTGAAGATAATTTTCCATTGCTTATGTCA  <  NC_000913/2774956‑2774661                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TACAAGGGGTTGCTGAAAAACGATAACCAACTGGCGATGTTATTCACGCTGGCCAACCTGTTTCGGGCGGACCAAATGATACGTCAGTGGGAGAGATCTCAATAAAAACTGGGGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAGACTTAAACCAAATATATACTTTAATATATCCATAATAAAAGA                                                                                                                                                                                                                                                         >  2:1607/1‑300                                       GTTATTCACGCTGGCCAACCTGTTTCGGGCGGACCAAATGATACGTCAGTGGGAGAGATCTCACTAAAAACTGGGGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAGACTTAAACCAAATATATACTTTAATATATCCATAATAGAAGAACCAAAAATTTCTAGCTTAGATTGCAAATAAGTTATTT                                                                                                                                                                                                                   >  2:501383/1‑300                                                           TGTTTCGGGCGGACCAAATGATACGTCAGTGGGAGAGATCTCACTAAAAACTGGGGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAGACTTAAACCAAATATATACTTTAATATATCCATAATAGAAGAACCAAAAATTTCTAGCTTAGATTGCAAATAAGTTATTTTACGAAGGTTCATTATCTTG                                                                                                                                                                                               <  1:269943/300‑1                                                                                     CAGTGGGAGAGATCTCACTAAAAACTGGGGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAGACTTAAACCAAATATATACTTTAATATATCCATAATAGAAGAACCAAAAATTTCTAGCTTAGATTGCAAATAAGTTATTTTACGAAGGTTCATTATCTTGTTATCAACAAAAACAAGATCTGCTGT                                                                                                                                                                     >  1:187747/1‑300                                                                                            AGAGATCTCACTAAAAACTGTGGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGTAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAGACTTAAACCAAATATATACTTTAATATATCCATAATAGAAAAACCAAAAATTTCTAGCTTAGATTGCAAATAAGTTATTTTACGAAGGTTCATTATCTTGTTATCAACAAAAACAAGATCTGCTGTGCCATAT                                                                                                                                                              <  2:364575/300‑1                                                                                              AGATCTCACTAAAAACTGGGGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAGACTTAAACCAAATATATACTTTAATATATCCATAATAGAAGAACCAAAAATTTCTAGCTTAGATTGCAAATAAGTTATTTTACGAAGGTTCATTATCTTGTTATCAACAAAAACAAGATCTGCTGTGCCATATAT                                                                                                                                                            <  2:271842/300‑1                                                                                                    CACTAAAAACTGGGGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAGACTTAAACCAAATATATACTTTAATATATCCATAATAGAAGAACCAAAAATTTCTAGCTTAGATTGCAAATAAGTTATTTTACGAAGGTTCATTATCTTGTTATCAACAAAAACAAGATCTGCTGTGCAATATATTTTGAT                                                                                                                                                      >  1:834831/1‑300                                                                                                                                                      GGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAGACTTAAACCAAATATATACTTTAATATATCCATAATAGAAGAACCAAAAATTTCTAGCTTAGATTGCAAATAAGTTATTTTACGAAGGTTCATTATCTTGTTATCAACGAAAACAAGATCTGCTGTGCCATATATTNTGATTTTTTTGCTTTTATTAACTAGTCCATACAAACTCCCTTCAGAAATAATAA                                                                                                    >  2:659969/1‑300                                                                                                                                                                     TTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGGCAGCCGAGAAGAATTCCCCCGCTTATTCGCACCGTCCCTAGCAGACTTAAACCAAGTATATACTTTAATATATCCATAATAGAAGAACCAAAAATTTCTAGCTTAGATTGCAAATAAGTTATTTTACGAAGGTTCATTATCTTGTTATCAACAAAAACAAGATCTGCTGTGCCATATATTTTGATTTTTTTGCTTTTATTAACTAGTCCATACAAACTCCCTTCAGAAATAATAATCTCCGATTCTGGCC                                                                                     <  2:475427/300‑1                                                                                                                                                                              GAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAGACTTAAACCAAATATATACTTTAATATATCCATAATAGAAGAACCAAAAATTTCTAGCTTAGATTGCAAATAAGTTATTTTACGAAGGTTCATTATCTTGTTATCAACAAAAACAAGATCTGCTGTGCCATATATTTTGATTTTTTTGCTTTTATTAACTAGTCCATACAAACTCCCTTCAGAAATAATAATCTCCGATTCTGGCCTTAACGACA                                                                            >  1:894777/1‑300                                                                                                                                                                                             AACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAGACTTAAACCAAATATATACTTTAATATATCCATAATAGAAGAACCAAAAATTTCTAGCTTAGATTGCAAATAAGTTATTTTACGAAGGTTCATTATCTTGTTATCAACAAAAACAAGATCTGCTGTGCCATATATTTTGATTTTTTTGCTTTTATTAACTAGTCCATACAAACTCNCTTCAGAAATAATAATCTCCGATTCTGGCCTTAACGACAAATGTTTCCAGTTGA                                                             >  2:673481/1‑300                                                                                                                                                                                                            AATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAGACTTAAACCAAATATATACTTTAATATATCCATAATAGAAGAACCAAAAATTTCTAGCTTAGATTGCAAATAAGTTATTTTACGAAGGTTCATTATCTTGTTATCAACAAAAACAAGATCTGCTGTGCCATATATTTTGATTTTTTTGCTTTTATTAACTAGTCCATACAAACTCCCTTCAGAAATAATAATCTCCGATTCTGGCCTTAACGACAAATGTTTCCCGTTGATACTAAACTGGGAGA                                              <  1:508645/300‑1                                                                                                                                                                                                                   GAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAGACTTAAACCAAATATATACTTTAATATATCCATAATAGAAGAACCAAAAATTTCTAGCTTAGATTGCAAATAAGTTATTTTACGAAGGTTCATTATCTTGTTATCAACAAAAACAAGATCTGCTGTGCCATATATTTTGATTTTTTTGCTTTTATTAACTAGTCCATACAAACTCCCTTCAGAAATAATAATCTCCGATTCTGGCCTTAACGACAAATGTTTCCCGTTGATACTAAACTGGGAGATACCTGT                                       >  1:403986/1‑300                                                                                                                                                                                                                                                        TTCCCTAGCAGACTTAAACCAAATATATACTTTAATATATCCATAATAGAAGAACCACAAATTTCTAGCTTAGATTGCAAATAAGTTATTTTACGAAGGTTCATTATCTTGTTATCAACAAAAACAAGATCTGCTGTGCCATATATTTTGATTTTTTTGCTTTTATTAACTAGTCCATACAAACTCCCTTCAGAAATAATAATCTCCGATTCTGGCCTTAACGACAAATGTTTCCCGTTGATACTAAACTGGGAGATACCTGTTGCTCTCAGTGAAGATAATTTTCCATTGCTTATGTCA  >  2:567497/1‑300                                                                                                                                                                                                                                                        TTCCCTAGCAGACTTAAACCAAATATATACTTTAATATATCCATAATAGAAGAACCAAAAATTTCTAGCTTAGATTGCAAATAAGTTATTTTACGAAGGTTCATTATCTTGTTATCAACAAAAACAAGATCTGCTGTGCCATATATTTTGATTTTTTTGCTTTTATTAACTAGTCCATACAAACTCCCTTCAGAAATAATAATCTCCGATTCTGGCCTTAACGACAAATGTTTCCCGTTGATACTAAACTGGGAGATACCTGTTGCTCTCAGTGAAGATAATTTTCCATTGCTTATGTCA  >  1:594016/1‑300                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TACAAGGGGTTGCTGAAAAACGATAACCAACTGGCGATGTTATTCACGCTGGCCAACCTGTTTCGGGCGGACCAAATGATACGTCAGTGGGAGAGATCTCACTAAAAACTGGGGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/2289169‑2288919 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTAGCAGACCTAAACCAAATATATACTTTAATATATCCATAATAGAAGAACCAAAAATTTCTAGCTTAGATTGCAAATAAGTTATTTTACGAAGGTTCATTATCTTGTTATCAACAAAAACAAGATCTGCTGTGCCATATATTTTGATTTTTTTGCTTTTATTAACTAGTCCATACAAACTCCCTTCAGAAATAATAATCTCCGATTCTGGCCTTAACGACAAATGTTTCCCGTTGATACTAAACTGGGAGATACCTGTTGCTCTCAGTGAAGATAATTTTCCATTGCTTATGTCA  <  NC_000913/2774956‑2774661

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.