| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,097,037 | (G)7→8 | intergenic (+208/+528) | ycdU → / ← serX | uncharacterized protein YcdU/tRNA‑Ser |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,097,037 | 1 | . | G | 80.4% | 146.4 / 35.0 | 56 | intergenic (+208/+528) | ycdU/serX | uncharacterized protein YcdU/tRNA‑Ser |
| Reads supporting (aligned to +/- strand): ref base . (7/4); new base G (13/32); total (20/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.15e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TTACTATTTTTTCTATTGTCGATTCCTCTGGCATAACGATTTTATGATGGCATGTGACATGTATTTCCGTTGGGGGCATTTTAATAAGTGAGGAAGTGATAGGAAGTGACCAGATAATACATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAG‑GG‑GGGG‑A‑TTGACTCG‑CTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTG > NC_000913/1096739‑1097329 | ttACTATTTTTTCTATTGTCGATTCCTCTGGCATAACGATTTTATGATGGCATGTGACATGTATTTCCGTTGGGGGCATTTTAATAAGTGAGGAAGTGATAGGAAGTGACCAGATAATACATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAg‑gg‑ggggg < 1:882648/300‑2 (MQ=255) tATTTTTTCTATTGTCTATTCCGCTTGCATGACGATTTTATGATGGCATGTTACNGGTATTGCCGGTGGGGGCATTTTAATAAGTGAGGAAGTGATAGGAAGTTACCAGATAATACATATAGGTTCTGTACTCTCGGGCGCATTTGGATTGTTGACTGATTAACCAGACAGTTGATGTGCACGATTTCCCCTCACCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAANAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAg‑gg‑gggggattg < 2:823064/300‑6 (MQ=37) tttttCTATTGTCGATTCCTCTGGCATAACGATTTTATGATGGCATGTCACATGTATTTCCGTTGGGGGCATTTTAATAAGTGAGGAAGTGATAGGAAGTGACCAGATAATACCTATATGTTCTGTACTCTCTTGCGCATTTTGATTGNTGACTGAGTAACCAGACAGTTGATGTNCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAG‑GG‑GGGGGA‑TTGACt < 2:583964/300‑1 (MQ=255) ccTCTGGCATAACGATTTTATGATGGCATGTGACATGTATTTCCGTTGGGGGCATTTTAATAAGTGAGGAAGTGATAGGAAGTGACCAGATAATACATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAg‑gg‑gggggcttaccctcctccctccaccctac > 1:313003/1‑275 (MQ=255) ccTCTGGCATAACGATTTTATGATGGCATGTGACATGTATTTCCGTTGGGGGCATTTTAATAAGTGAGGAAGTGATAGGAAGTGACCAGATAATACATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAG‑GG‑GGGGGA‑TTGACTCG‑CTTCGCTCGCCCTGc > 1:868028/1‑300 (MQ=255) ctctGGCATAACGATTTTATGATGGCATGTGACATGTATTTCCGTTGGGGGCATTTTAATAAGTGAGGAAGTGATAGGAAGTGACCAGATAATACATATATGTTCTGTACTCTCTTGCGCATTTNGATTGTTGACTGAGTAACCAGACAGTNGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAG‑GG‑GGGG‑A‑TTGACTCG‑CTTCGCTCGCCCTGCgg > 2:599546/1‑300 (MQ=255) ggCATAACGATTTTATGATGGCATGTGACATGTATTTCCGTTGGGGGCATTTTAATAAGTGAGGAAGTGATAGGAAGTGACCAGATAATACATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAG‑GG‑GGGG‑A‑TTGACTCG‑CTTCGCTCGACCCGCGGGCAg > 2:838852/1‑300 (MQ=255) ttttATGATGGCATGTGACATGTATTTCCGTTGGGGGCATTTTAATAAGTGAGGAAGTGATAGGAAGTGACCAGATAATACATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAG‑GG‑GGGGGA‑TTGACTCG‑CTTCGCTCGCCCTGCGGGCAGCCCGCTCAc < 1:814010/300‑1 (MQ=255) ttATGATGGCATTTGACATGTATTTCCTTTGTGGGCATTTTAATAAGTGAGGAAGTGATAGGAAGTGACCAGATAATACATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAG‑GG‑GGGGGA‑TTGACTCG‑CTTCGCTCGCCCTGCGGGCAGCCCGCTCACTg < 1:438283/300‑1 (MQ=255) tgGCATGTGACATGTATTTCCGTTGGGGGCATTTTAATAAGTGAGGAAGTGATAGGAAGTGACCAGATAATACATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTCAG‑GG‑GGGGGA‑TTGACTCG‑CTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCa < 2:563210/300‑1 (MQ=255) ggCATGTGACATGTATTTCCGTTGGGGGCCTTTTACTAAGTGAGGACGTGATATGAAGTGACCAGATACTACATCTATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCCCGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATANACGAAACAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTCCATATGGAGGTGAG‑GG‑GGGGGC‑TTGACTCG‑CTTAGCTCGCCCCGCGGGCAGCCCGCTCACTGCGTTCAc > 1:616489/1‑300 (MQ=255) ggCATGTGACATGTATTTCCGTTGGGGGCATTTTAATAAGTGAGGAAGTGATAGGAAGTGACCAGATAATACATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGATGTGGGCGGGGGCACCCGGTGTGTGTAATATACGACAAAAAAGCCCGTACTTTCGTATGAGTTCTTCTTTAAATATGGCGGTGAG‑GG‑GGGG‑GGTTGATCCG‑TTTCTCTCGCCCTGCGGGCAGCACGCTCATTGCGtttat > 2:381566/1‑297 (MQ=255) cATGTGACAGGTATTTCCGGTGGGGGCATGGTAATAAGTGAGGAAGTGATAGGAAGTGACCAGATAATACATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAATAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAG‑GG‑GGGGGA‑TTGACTCG‑CTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACgg < 2:871862/300‑1 (MQ=255) aTGTGACATGTATTTCCGTTGGGGGCATTTTAATAAGTGAGGAAGTGATAGGAAGTGACCAGATAATACATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAG‑GG‑GGGGGA‑TTGACTCG‑CTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGt < 1:460075/300‑1 (MQ=255) gcATGAATTTCCGTTGGGGGCATTTGGATAAGTGGGTAAGTGATGGTAATGGACCAGATAGTACGTATATGTTCTGTACGCTCTTGCGCAGTTTGATTGTTTACTGATTAACCAGACAGTTGCTGTGTACGATTTCCCCTCGCCCTAACAGATGTGGGCGTGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAG‑GG‑GGGG‑A‑TTGACTCG‑CTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTcc < 1:858218/299‑1 (MQ=18) gTATTTCCTTTGGGGGCATTTTAATAAGTGAGGAAGTGATAGGAAGTGACCAGANAATACATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAG‑GG‑GGGGGA‑TTNACTCG‑CTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAAc < 2:821153/300‑1 (MQ=255) gTATTTCCGTTGGGGGCATTTTAATAAGTGAGGAAGTGATAGGAAGTGACCAGATAATACATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAG‑GG‑GGGGGA‑TTGACTCG‑CTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAAc > 1:760232/1‑300 (MQ=255) aTTTCCGTTGGGGGCATTTTAATAAGTGAGGAAGTGATAGGAAGTGACCAGATAATACATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATNTACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAG‑GG‑GGGGGA‑TTGACTCG‑CTTCGCTCGCCCTGCGGGCAGNCCGCTCACTGCGTTCACGGTCTGTCCAACTg < 2:645624/300‑1 (MQ=255) aTTTCCGTTGGGGGCATTTTAATAAGTGAGGAAGTGATAGGAAGTGACCAGATAATACATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAG‑GG‑GGGGGA‑TTGACTCG‑CTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTg < 1:119990/300‑1 (MQ=255) gTGATAGGAAGTTACCAGATAATACCTATCTGTTCCGTACTCTCTTGCGCATTTTGATTTTTTACTGAATAACCAGACAGTTGGTGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGTGT‑TGGG‑A‑TTGACTCG‑CTTCGCTCGCCCTGCGGGCAGCCCGCCCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCt < 2:42222/300‑1 (MQ=21) gTGATAGGAAGTGACCAGATAATACATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAG‑GG‑GGGGGA‑TTGACTCG‑CTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCt < 2:514497/300‑1 (MQ=255) gATAGGAAGTGACCAGATAATACATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTTTTCTTTAAATATGGCGGTGAG‑GG‑GGGGGA‑TTGACTCG‑CTTCGCTCGCATTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCAGGTCGGGGCTtc > 1:216266/1‑300 (MQ=255) gAAGTGACCAGATAATACATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTATGAGCTCTTATTTAAATATGGCGGTGAG‑GG‑GGGGGA‑TTGACTCG‑CTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCACCTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATc > 1:251613/1‑300 (MQ=255) ccAGATAATACATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAG‑GG‑GGGG‑G‑GTTACCCAACTTCACTCACCCTACGGGCATCCCGCCCACTGCGTCCACGGCCTGTCCAACTGGTTGTCACAAGTTGTCGACCCCAGGTAGGGGCTTCTCACCCCCCCgg > 1:855713/1‑300 (MQ=25) aagagaagaCATATATGTTCTGTACGCTCTGGCGCAGTTTGATTGGTGACGGAGTAACCAGACAGGTGATGTGCACGCTTTCCCCTCGCCCTAATAGACGTGGGCGTGTNCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAG‑GG‑GGGG‑A‑TTGACTCG‑CTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGgtg < 1:612415/292‑1 (MQ=17) aGATAATACATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAG‑GG‑GGGGGA‑TTGACTCG‑CTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGgtg > 1:741652/1‑300 (MQ=255) aGATAATACATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTAAG‑GG‑GGGG‑AATTAACTCG‑TTTCGCTCGCCCTGCGGTAAGCCCGCTCCCTGCGTTCCCGATCTATCNAACTGGCTGTCGCAAGTCGTCGAACCACGGTAGGGGATTCTCGTccancagttg > 2:726579/1‑292 (MQ=21) gacagtatatGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAG‑GG‑GGGGGA‑TTGACTCG‑CTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGc < 1:812206/295‑1 (MQ=255) ataCATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAG‑GG‑GGGGGA‑TTGACTCG‑CTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGc < 1:265443/300‑1 (MQ=255) ataCATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAG‑GG‑GGGGGA‑TTGACTCG‑CTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCACGGTGTGTGc > 2:110175/1‑300 (MQ=255) cATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTTACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAG‑GG‑GGGGGA‑TTGACTCG‑CTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAAt < 2:517339/300‑1 (MQ=255) atatctGTTCTGTACTCTCTTGCGCATTTTGATTTTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACATACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAG‑GGNGGGG‑A‑TTGACTCG‑CTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCC‑GGTCNGGGCTTCTCATCCCCCCGGTGTGTGCAATac < 2:636964/300‑1 (MQ=255) tatatGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAG‑GG‑GGGGGA‑TTGACTCG‑CTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATac < 1:85386/300‑1 (MQ=255) tatatGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAG‑GG‑GGGGGA‑TTGACTCG‑CTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGcctgtc > 2:795169/1‑295 (MQ=255) tatGTTCTGTACCCTCTTGCGCATTTTGATTGTTGACTGAGGAACCAGACAGTTGATGTGCACAATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACGTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAG‑GG‑GGGGGA‑TTGACTCG‑CTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATatac < 2:20770/300‑4 (MQ=255) cTGTACTCTCTTGCGTATTGTGATTTTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAG‑GG‑GGGGGA‑TTGACTCG‑CTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGaaaaa < 2:157307/300‑1 (MQ=255) aTTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAG‑GG‑GGGGGA‑TTGACTCG‑CTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGTTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTAATCCACCAGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAg > 1:214836/1‑300 (MQ=255) gAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAG‑GG‑GGGG‑AATTGACTCG‑CTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAAGTGGTTGTCGCCAGTTGTCGAACCCCGGTGGGGGCTTCTCATCCCCAAGGTGTGTGCAATACACGAAAAAAAAGCACGTACTTTAGTAAGAATTCTTCTTTa > 1:486267/1‑300 (MQ=17) tAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTTTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAG‑GG‑GGGGGA‑TTGACTCG‑CTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAat < 2:254966/300‑1 (MQ=255) tAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAG‑GG‑GGGGGA‑TTGACTCG‑CTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAat < 1:110527/300‑1 (MQ=255) cGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTATGAGCTCTTCTTTAAATATGGCGGTGAG‑GG‑GGGG‑GGTTGACTCA‑CTTCGCTGTCCCTGCGTGCAGCCCTTTCACTTCTTTCCCCTTCTGTCCACCTGGTTGTTGCCAGTTATCTAACCCCGGTCGGGGCTTCTAACCCCCCCAGCGTGCGTCAGACACGAAACAAGAGCCCGCACTTTAGTGGGGGCTTTTCTTTAAACATGGTGGTGAGGGGGGGATTgggacgtccggg > 2:142079/1‑289 (MQ=9) tcgtagatgggtataagagccatcACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTATTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAG‑GG‑GGGGGA‑TTGACTCG‑CTTCGCTCGCCCTGCGGGCAACCCGCTCACTGCGTTCATGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAAGATGGCGTTGAGGGGGGGATTGACtcgctttgct < 1:52082/277‑1 (MQ=11) ggCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAG‑GG‑GGGGGA‑TTGACTCG‑CTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCATTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTc < 1:211788/300‑1 (MQ=25) ggCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAG‑GG‑GGGGGA‑TTGACTCG‑CTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTc < 1:211856/300‑1 (MQ=25) cACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAG‑GG‑GGGGGA‑TTGACTCG‑CTTCGCTCGCCCTGCGGGCAGCCCGCTCCCTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACAAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTAGCTTCGCTCGCCCTGCGGGCAGCCCGCTCAc > 1:107447/1‑300 (MQ=12) cACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAG‑GG‑GGGGGA‑TTGACTCG‑CTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCAc < 1:298592/300‑1 (MQ=21) cACCCGGTATGTGCAATATACGAAAAAAAAGCCCGTATTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAG‑GG‑GGGGGA‑TTGCCTCG‑CTTCGCTCGCCCTTCGGGCAGCCCGCTCCCTGTGTTCACGGTCTGTCCCACCGGCTGTCGCCAGTTGTCGCCCCCCGATCTGGGCTTCTCATCCCCCCGGTGTGTGTAATGCACGAAAAAAAAGCCCGTACGTTAGTACGAGCTCTTCTTTAAATATGGCGGCGAGGGGGGAATTGACTCGCTtcgctctatttcttatacacatctcgca > 2:51950/1‑278 (MQ=11) ccGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAG‑GG‑GGGGGA‑TTGACTCG‑CTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGc < 1:824733/300‑1 (MQ=21) gtgtgCAATATACGAAAAAAAAGCTCGTACTGTCGTACGAGCTCTTCTTTAAATATGACGGTGAG‑GG‑GGGGGA‑TTGACTCT‑CTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGTCAGCCCGCTCACTGCGTTCa < 1:261873/300‑1 (MQ=255) gtgCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAG‑GG‑GGGGGA‑TTGACTCG‑CTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCACCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCACGTACTTTCGTATGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACg > 1:438632/1‑300 (MQ=255) gCAATAGACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATGTGGCGGTGAG‑GG‑GGGGGA‑TTGACTCG‑CTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGt < 1:18012/300‑1 (MQ=17) cAATATACGGAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTGTAAATATGGCGTTGAG‑GG‑GGGGGA‑TTGACTCT‑CTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTc < 2:150485/300‑1 (MQ=255) cAATAGACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTGGAAATATGGCGTTGAG‑GG‑GGGGGA‑TTGACTCG‑CTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTc < 1:214238/300‑1 (MQ=255) gAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAG‑GG‑GGGGGA‑TTGACTCG‑CTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAAc < 1:687492/300‑1 (MQ=17) aaaaaaaGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAG‑GG‑GGGGGA‑TTGACTCG‑CTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCNGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTg < 1:655435/300‑1 (MQ=17) aaaGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAG‑GG‑GGGGGA‑TTGACTCG‑CTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTCCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGGGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTg < 1:479888/300‑1 (MQ=17) tcttTAAATATGGCGGTGAG‑GG‑GGGGGA‑TTGACTCG‑CTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCACGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTATGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCGGTTGCCAGCTGTAGAAccaaggccggg > 1:198125/1‑291 (MQ=11) atatGGCGGTGAG‑GG‑GGGGGA‑TTGACTCG‑CTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTtctc < 1:444358/300‑1 (MQ=17) gCGGTGAG‑GG‑GGGGGA‑TTGACTCG‑CTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATccc < 1:439030/300‑1 (MQ=17) cg‑gg‑ggga‑A‑TCGACTAG‑CTTCGCTCGCCCTGTGTGCATCCCGCTTCCGGCGGTCACGGTCGGGCCAAATGGCCGTCGCTAGCCGTCGACCCCCCATCGGTGCTTCTCATCCCCCCGGGGTGTGCAATAAACGAAAAAAAAGCCTGTACTTCCGTACGAGCCCTTCTTGAAAGATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGgtg < 2:848060/299‑1 (MQ=11) gtgg‑gggg‑A‑TTGACTCG‑CTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGgtg < 1:464091/298‑1 (MQ=17) | TTACTATTTTTTCTATTGTCGATTCCTCTGGCATAACGATTTTATGATGGCATGTGACATGTATTTCCGTTGGGGGCATTTTAATAAGTGAGGAAGTGATAGGAAGTGACCAGATAATACATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAG‑GG‑GGGG‑A‑TTGACTCG‑CTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTG > NC_000913/1096739‑1097329 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |