New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 781446	50 (0.490)	4 (0.050)	4/442	8.1	8.9%	intergenic (+2/‑131)	lysZ/lysQ	tRNA‑Lys/tRNA‑Lys
	?	NC_000913	781655 =	45 (0.600)					intergenic (+3/‑430)	lysQ/nadA	tRNA‑Lys/quinolinate synthase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

AGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTA‑ACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATG‑ATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTT  >  NC_000913/781169‑781729                                                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                                                                             agCAGTTGACGTTTAATCAATTGGTCGCAGGTTCGAATCCTACACGACCCACCAGTTTTAACACCAAACTCAGACGTTAAGCGTTAAGGATAACGTCGCGCCATCAACTGCCCGTAGGGCGAGCGAAGCGAGTCACTATACGCTACACGTTAACCTGGAAGATGAGATTTGGGTAAGAGACAGTCCTGTC‑ACCCACCCATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTagag                                                                                                                                                                                                                                                                        <  1:375512/300‑1 (MQ=12)  gCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGTATCTCTTATCCCCATGTCCGAGCCCAAGTGAACGTGTCCCAGGTAGAGACC‑GTATGGGTTGTTAGCTCAGTTGGTAGAGTAGTTGAAGTTTAATCGATTGGTAGCAGGTTCGAATCCTGCACGAACCACCAATTTAAAGGTGGTTACTGGTagagg                                                                                                                                                                                                                                                                       >  1:812638/1‑299 (MQ=9)   catttGACTTTTAATCAATTGGTCGCAGTTTCGAATCCTGCACGACCCACCATTTTTAACATCAAACTCAGATATTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATGGGCCCCGAGTAAAAATCTTTCAGGTA‑ACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGaa                                                                                                                                                                                                                                                                      <  1:664574/297‑1 (MQ=255)           ttttAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACGCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTA‑ACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAgg                                                                                                                                                                                                                                                              <  2:482555/300‑1 (MQ=255)                  cAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTGAACATCGAATTCNGATGTTAAGCGTGGAGGATAACGTTGCGCCAGCAACGGCCCGTAGTGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTA‑ACACCCGTATGGTTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATNCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGt                                                                                                                                                                                                                                                       <  2:771464/300‑1 (MQ=255)                                ttCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTA‑ACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCATGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACgg                                                                                                                                                                                                                                         >  1:408895/1‑300 (MQ=255)                                               aCCCACCAGCTTTAACATCAACCTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCTAAACGACTCATCCCGCACGAACCACCAAACTGAAAAATTGGCCCCGAGTAAAAATCCTTCAGGTA‑ACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGAc                                                                                                                                                                                                                          <  2:6320/300‑1 (MQ=37)                                                    ccaGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAANATTGGCCCCGAGTAAAAACCTTTCAGGTA‑ACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGt                                                                                                                                                                                                                     <  1:570935/300‑1 (MQ=255)                                                      aGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGCGTAAACCTCTTTAAGGTA‑ACACCCGTATGGGTAGTTAGTTCAGTTGGTAGAGCAGTTGAATTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCg                                                                                                                                                                                                                   >  1:4300/1‑300 (MQ=255)                                                                   aaCTCAGATGTGAAGCGTGAAGGGTGACGTTGTGCTAGCAACGGCCCGTAGTGCGGGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGGGTAAAAATCTTTCAGTTA‑ACACCCGTATGGTTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCAc                                                                                                                                                                                                      <  2:330980/300‑1 (MQ=37)                                                                     cTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTA‑ACCCCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCNGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGa                                                                                                                                                                                                    >  2:727225/1‑300 (MQ=255)                                                                           tGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCAGAGTAAAAATCTTTCAGGTA‑ACAACCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAACTTAAAGGTGGTTAGTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCAGAAGGACGAGACGAAGTCGAGTCATCCTGCACGACcaacc                                                                                                                                                                                              >  2:399384/1‑300 (MQ=37)                                                                           tGTTAAGCGTGTAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCACTCTTAAAGGTTGGCCCAGCGTAAACATCTTTCAGTTC‑CCACCCGTATATGTCGTTAGCTCAGTCGGTAGAGCAGTCGACTTTTCACCAATTGGTAGCAGGTTCGCCTCCTACACGACCAACCAATTTCAAGGTGGTTAGTGGTAGCGAACGTGCAGGATAACGTTACGTTAGCAACGGCAAGAAGGGAGAGAAGAAGTCTAGTCATTTTGCACGACacacc                                                                                                                                                                                              >  2:399380/1‑300 (MQ=16)                                                                             ttAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTA‑ACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCAt                                                                                                                                                                                            <  1:171948/300‑1 (MQ=255)                                                                             ttAAGCGTGAAGGAGAACGTTGCGCCAGCAACTGCCCGGAGGGCGAGCGAAACGAGTCAGCCTGTACGACCCACCAATCTGAAAGAGTGGCCCCGAGTAAAAATCTTTCAGGTA‑ACCCCCGTATGGGTCGTTAGCTCAGTTGTTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCAt                                                                                                                                                                                            <  1:263964/300‑1 (MQ=25)                                                                                        ggATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAGAAATCTTTCAGGTA‑ACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGAACCACCATACTGAATG‑Att                                                                                                                                                                                >  1:720625/1‑300 (MQ=255)                                                                                        ggATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTA‑ACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAAGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGAACGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATG‑Att                                                                                                                                                                                >  1:640544/1‑300 (MQ=255)                                                                                             gatgtgtataagagacagCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTA‑ACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATG‑ATTAAGgc                                                                                                                                                                           <  1:22307/283‑1 (MQ=255)                                                                                             aCGTTGCGTCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTA‑ACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATG‑ATTAAGgc                                                                                                                                                                           <  1:404477/300‑1 (MQ=255)                                                                                             aCGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTA‑ACACCCGTATGGGTCGTTAGCTCATTCGTTAGAGCAGTTGACTTTTAATCAATTGTTCGCAGGTTTGAATCTTGCACGATTCGCCGAGGTAAAGGTGGTGAATGGTATAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATG‑ATTAAGgc                                                                                                                                                                           <  1:404554/300‑1 (MQ=37)                                                                                             aCGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTA‑ACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATG‑ATTAAGgc                                                                                                                                                                           <  1:404473/300‑1 (MQ=255)                                                                                                       aGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTA‑ACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATG‑ATTAAGGCAGCATAATcc                                                                                                                                                                 <  1:385502/300‑1 (MQ=255)                                                                                                               cccGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTA‑ACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCACGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATG‑ATTAAGgcctgtctcttatacacatc                                                                                                                                                         >  2:22275/1‑282 (MQ=255)                                                                                                                                  gaGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTA‑ACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATACCGTTGCGTTAGCAACGGCACGCAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATG‑ATTAAGGCCGCATAATCCAGCAAGGGGTCGTTAGCTCAGTTGGTa                                                                                                                                      >  1:151097/1‑300 (MQ=255)                                                                                                                                  gaGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTA‑ACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGNTCGAATCCTACACGACCCACCAATTTNAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGCGTCATCCTGCACGACCCACCATCCTGAATG‑ATTAAGGCAGAATAATCCCGCAAGGGGTCGTTAGTTCAGTTGGTa                                                                                                                                      >  2:545987/1‑300 (MQ=255)                                                                                                                                   aGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTA‑ACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATG‑ATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTag                                                                                                                                     <  2:432591/300‑1 (MQ=255)                                                                                                                                   aGTCATCCTGCACGACCCACCAACCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGTTA‑ACACCCGTATGGGTCGTTAGCTCATTTGTTAGATCAGTTGACTTTTAATCAATTGGTCTCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGTTGGTTACTGGTAGAGAACGTGAAGGAGAATGTTGCGTTGGCGATGGTGCGAGGGGATAGATGGAGTCGATGCATCCTGCACGACCCACCATCCTGAATG‑ATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTag                                                                                                                                     <  1:676313/300‑1 (MQ=255)                                                                                                                                   aGTCATCCTGCACAACCCACCAATCTTAAAGAGTGGCCCCGAGTAAAAATCCTTCAGTTA‑ACACCCATATGGTTCGTTAGCTCAGTTGTTAGAGCAGTTGACGTTTAATCAATTGGTCGCAGGTTTGAATCCTGCACGACCCACCAATGTAGAGGTGGTTACTGGTAGGGAACGTGGAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATG‑ATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTag                                                                                                                                     <  2:16633/300‑1 (MQ=37)                                                                                                                                     tCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGTTA‑ACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATG‑ATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTagag                                                                                                                                   <  2:367704/300‑1 (MQ=255)                                                                                                                                      cATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGGAAAAATCTTTCAGGTA‑ACACCCGTATGGGTCGTTAGCTCAGTTGTTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAATTCGAGTCATCCTGCACGACCCACCATCCTGAATG‑ATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGc                                                                                                                                  <  1:385674/300‑1 (MQ=255)                                                                                                                                       aTCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTA‑ACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGCAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTNAATG‑ATTAAGGCAGCATAATCCAGCAAGGGGTCGTTAGCTCAGTTGGTAGAGcc                                                                                                                                 >  2:621799/1‑299 (MQ=255)                                                                                                                                          cTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTA‑ACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATG‑ATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGtt                                                                                                                              >  1:154808/1‑300 (MQ=255)                                                                                                                                          cTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTA‑ACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCACGACGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAANG‑ATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTCGNGCAGtt                                                                                                                              >  2:670351/1‑300 (MQ=255)                                                                                                                                                                            atgtgtntaagagacagatcacccaccaccgggTCGTTAGCTCAGTTGGTAGAGNAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATG‑ATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATcc                                                                                             <  2:671135/270‑1 (MQ=37)                                                                                                                                                                                aaagtccctCAGGTA‑ACACCCGTATGGGTCGTTAGCTCAGTTGTTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTGAAAGTTGGTTACTGGTAGAGAACGTTAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATG‑ATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCAc                                                                                        <  1:146309/292‑1 (MQ=255)                                                                                                                                                                                   aTCTTTCAGGTA‑ACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATG‑ATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGAc                                                                                     <  1:668742/300‑1 (MQ=255)                                                                                                                                                                                             atcacccaccaccgggTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATG‑ATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATccctgtctcttatacacat                                                                            >  1:686478/14‑283 (MQ=37)                                                                                                                                                                                                                ttAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATG‑ATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAgg                                                         <  1:145230/300‑1 (MQ=255)                                                                                                                                                                                                                        gTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATTCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCACGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATG‑ATTAAGGCAGCATAATCCAGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAgacgatctgt                                                 >  2:15265/1‑291 (MQ=255)                                                                                                                                                                                                                           gttatagCAGTTGACTTTTAGTCAATTGTGCGCGGGTTCGAAGCCGGCACTACCCACCAATTTAAAGGTGGTTGTTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGGAGGGCTAGACGAAGTCGAGTCACCCTGCACGACCCACCATCCTGAATG‑ATTAAGGCAGCATAATCCCGCAATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGc                                              <  2:248853/295‑1 (MQ=25)                                                                                                                                                                                                                                         cTTTTAATCACTTGGCCGCAGTTTCAAACCCTGCACGACCCCCCACTTTAACGGTGGTTGCTGGTAGGGAACGTGAAGGATAAAGTTGCGTTAGCGACGGCTCGGAGGGTGAGACGAAGTAGAGTAACACTGCAAAAAACAACATCC‑GAAGGGAGAAATTCAGAATAACCCCCAAATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTc                                <  1:58206/300‑1 (MQ=9)                                                                                                                                                                                                                                         cTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCACCCTGAATG‑ATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGTTCAGTCGGTAGAGCCGTTGACTTTTAATCAATTGGTCGCAGGTTCGCATCCTGCACGNCCCACCAATGTAAAAAAGCGCCCTAAAGGAGCTTTTTTGCTATCTGCGACACTc                                >  2:613427/1‑300 (MQ=255)                                                                                                                                                                                                                                                   aTTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATG‑ATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGANCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCTATACTCAAAGATTCGa                      >  1:568018/1‑300 (MQ=255)                                                                                                                                                                                                                                                             ggTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATG‑ATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTgcagca            >  1:504319/1‑300 (MQ=255)                                                                                                                                                                                                                                                               ttCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATG‑ATTAAGGCAGCATAATCCAGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTTCGATACTCAAAGATTCGAACCTGCAGCAgg          >  1:238896/1‑300 (MQ=255)                                                                                                                                                                                                                                                                    aTCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGCGTCATCCTGCACGACCCACCCTCCTGAATG‑ATTAAGGCAGCATACTCCCTCCCGTGATCGTTCGCTCAGTTGGTAGCGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGCATCCTGCACGACCCACCAATGTAAAAAAGCGCCATAAAGGCGCTTTTCTGCTATCTGCGATACTAACAGATTCGCCCCTACAGCAGGTttga     >  1:445898/1‑300 (MQ=25)                                                                                                                                                                                                                                                                       cTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATG‑ATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTACAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTttgagtt  >  2:269986/1‑300 (MQ=255)                                                                                                                                                                                                                                                                       cTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATG‑ATTAAGGCAGCATAATCCAGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGGTTCGAACCTGCAGCCGGTttgagtt  >  1:10014/1‑300 (MQ=255)                                                                                                                                                                                                                                                                       cTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATG‑ATTAAGGCAGCATAATCCAGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTttgagtt  >  1:202205/1‑300 (MQ=255)                                                                                                                                                                                                                                                                       cTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCATGAATG‑ATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTttgagtt  >  2:274022/1‑300 (MQ=255)                                                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                                                                             AGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTA‑ACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATG‑ATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTT  >  NC_000913/781169‑781729

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.