New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1492213	15 (0.310)	15 (0.310)	15/488	1.7	50.0%	intergenic (+38/‑257)	sokB/trg	putative small regulatory RNA antitoxin SokB/methyl‑accepting chemotaxis protein Trg
	?	NC_000913	= 3722075	NA (NA)					noncoding (1443/1443 nt)	IS150	repeat region

GTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGTGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGATGCTGTTACGGAATATATTGAATACTACAACAGCAGAAGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCGGTGAATACCTGAGACAAACAGTCTCAAGCACCCGTGGCTATTCTAGCTTAATAAGTTTGTTTCTTCTCCTTGATATAATCCTAAAAAAATCTCATAAAATTAATATATGAGATAATCTTTATTCAGCAGAAGATTATTAAAGGTTGCTGTATTATTTAGCGATAAAAAAAGCCTGCCAGATGGCAGGCTATTTAATAACGG  >  NC_000913/3721830‑3722322                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                        gTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGTGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGATGCTGTTACGGAATATATTGAATACTACAACAGCAGAAGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGTAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACtt                                                                                                                                                                                                                                                    <  1:468139/251‑1 (MQ=255)    cAGAAAAGGCAATTGTCTGGATAATGCTGTGGTGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGATGCTGTTACGGAATATATTGAATACTACAACAGCAGAAGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACTTTg                                                                                                                                                                                                                                                  >  2:153283/1‑250 (MQ=255)    cAGAAAAGGCAATTGTCTGGATAATGCTGTGGTGGAGTGTTTATTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATGTAAGCGAACTGAAGGATGCTGTTACGGAATATATTGAATACTACAACAGCAGAAGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACTTTg                                                                                                                                                                                                                                                  >  1:481738/1‑250 (MQ=255)      gAAAAGGCAATTGTCTGGATAATGCTGTGGTGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTGGATGAGTTCAGTAATAGAAGCGAACTGAAGGATGCTGTTACGGAATATATTGAATACTACAACAGCAGAAGAATTAGCCTGAAATTAAAAGGTCTTACTCCAATTGAATATCGGAAGCAGTCCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATCTTTGAtt                                                                                                                                                                                                                                               <  2:227559/251‑1 (MQ=255)              aatnatCTGGATGATGCTGTGGTGGAGTGTTTCTTTGGAACTTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCATTAATATAAGCGAGCTGAATAATGCTGTGACGTAATATATTGAATACTACAACAGCAGAAGAATAAGGCGGTAATTAAAATGTCTGTTCCCTATTGAGTATGGGAGTCAGACCTAGATGCCGCGTATATAACTGTCGTACTTTTTGAGGTCATTACaattcgatcgttcttacta                                                                                                                                                                                                                                       <  2:480790/246‑18 (MQ=255)              aaTTGTCTGGATAATGCTGTGGTGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGATGCTGTTACGGAATATATTGAATACTACAACAGCAGAAGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAgcctgagactttctgttt                                                                                                                                                                                                                                       <  2:110223‑M2/251‑19 (MQ=255)                          aaTGCTGTGGTGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGATGCTGTTACGGAATATATTGAATACTACAACAGCAGAAGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAagcggacctattttgataacgaggctttcc                                                                                                                                                                                                                           >  2:373389‑M1/1‑221 (MQ=255)                               tgtgGTGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGATGCTGTTACGGAATATATTGAATACTACAACAGCAGAAGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAgcctgagactttctgttttcaggctaaccgggaat                                                                                                                                                                                                                      <  2:54304‑M2/251‑36 (MQ=255)                                       aGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGATGCTGTTACGGAATATATTGAATACTACAACAGCAGAAGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAatgcgaggctttttactatgctttatcttcgctcctggcgttc                                                                                                                                                                                                              >  1:203833‑M2/1‑208 (MQ=255)                                                   gAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGATGCTGTTACGGAATATATTGAATACTACAACAGCAGAAGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCGGTGAATAcc                                                                                                                                                                                                  >  1:345164/1‑251 (MQ=255)                                                              tCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGATGCTGTTACGGAATATATTGAATACTACAACAGCAGAAGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAgcctgagacttt                                                                                                                                                                                                                                             >  1:143681‑M2/1‑185 (MQ=255)                                                              tCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGATGCTGTTACGGAATATATTGAATACTACAACAGCAGAAGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAgcctgagacttt                                                                                                                                                                                                                                             <  2:143681‑M2/197‑13 (MQ=255)                                                                  aGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGATGCTGTTACGGAATATATTGAATACTACAACAGCAGAAGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCGGTGAATACCTGAGACAAACAGtct                                                                                                                                                                                   >  1:157976/1‑251 (MQ=255)                                                                       ttttATCTTGATGAGTTCAGTAATATAAGCGAAATGAAGGATGCTGTTACGGAATATATTGAATACTACAACAGCAGAAGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCGAACTTTTTGGGGTCAGTACAAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCGGTGAATACCTGAGACAAACAGTCTCAAg                                                                                                                                                                               <  2:139821/250‑1 (MQ=255)                                                                              atgatgagTTCAGTAAGATAAGCTAACGGAAGGATGGTGTTACGTAATATATTGAATACTACAACAGCAGAAGAATTAGCCTGAAATTAAAAGGTCTGACTCCAAGTGAATATCGGAAGCAGACCTATATGCCTCCGGTTTAACTGTCCAACTTTTTGTGGTCAGTACAgcctgagagattctgttttcaggctaagcgggaatcagaatgacgaaggacccgcgcgaaatttctatcaaccgaggccaac                                                                                                                                                                       >  2:500885‑M2/2‑169 (MQ=255)                                                                                   gaGTTCAGTAATATAAGCGAACTGAAGGATGCTGTTACGGAATATATTGAATACTACAACAGCAGAAGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCGGTGAATACCTGAGACAAACAGTCTCAAGCACCCGTGGCTAt                                                                                                                                                                  <  1:435187/251‑1 (MQ=255)                                                                                     gTTCAGTAATATAAGCGAACTGAAGGATGCTGTTACGGAATATATTGAATACTACAACAGCAGAAGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCGGTGAATACCTGAGACAAACAGTCTCAAGCACCCGTGGCTCTTc                                                                                                                                                                >  2:245910/1‑251 (MQ=255)                                                                                        cAGTAATATAAGCGAACTGAAGGATGCTGTTACGGAATATATTGAATACTACAACAGCAGAAGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAatgcgaggctttttactatgctttatcttcgctccgggcgttcggatatttgcccgccgcgtgattcgcgttacacttgcggcctttagtat                                                                                                                                                             >  1:8386‑M2/1‑159 (MQ=255)                                                                                            aaTATAAGCGAACTGAAGGATGCTGTTACGGAATATATTGAATACTACAACAGCAGAAGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAgcctgagactttctgttttcaggctaaccgggaatcagaaagacgaaggccccgaccgatatttctatcaaccgaggccaacgaatgaacctagca                                                                                                                                                         >  1:409775‑M2/1‑155 (MQ=255)                                                                                              tataAGCGAACTGAAGGATGCTGTTACGGAATATATTGAATACTACAACAGCAGAAGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCGGTGAATACCTGAGACAAACAGTCTCAAGCACCCGTGGCTATTCTAGCTtaat                                                                                                                                                       >  1:510599/1‑251 (MQ=255)                                                                                               ataAGCGAACTGAAGGATGCTGTTACGGAATATATTGAATACTACAACAGCAGAAGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCGGTGAATACCTGAGACAAACAGTCTCAAGCACCCGTGGCTATTCTAGCTtaata                                                                                                                                                      <  2:263660/251‑1 (MQ=255)                                                                                                        cTGAAGGATGCTGTTACGGAATATATTGAATACTACAACAGCAGAAGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCGGTGAATACCTGAGACAAACAGTCTCAAGCACCCGTGGCTATTCTAGCTTAATAAgtttgttt                                                                                                                                             >  1:372842/1‑251 (MQ=255)                                                                                                          gaatgATGCTGTTACGGAATATATTGAATACTACAACAGCAGAAGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCGGTGAATACCTGAGACAAACAGTCTCAAGCACCCGTGTCTATTCTAGCTTAATAAttttgttt                                                                                                                                             <  2:340855/245‑1 (MQ=255)                                                                                                          gAAGGATGCTGTTACGGAATATATTGAATACTACAACAGCAGAAGAATTAGCCTGAAATTAAAAGGTCTGACTCCAAGTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCGGTGAATACCTGAGACAAACAGTCTCAAGCACCCGTGGCTATTCTAGCTTAATAAGTTTGTttc                                                                                                                                            <  1:245910/250‑1 (MQ=255)                                                                                                                          gAATATATTGCATCCTACAACAGCAGAAGAATTAGCCTGAAATTAAAAGGTCTGACTCCACTTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCGGTGAATACCTGAGACAAACAGTCTCAAGCACCCGTGGCTATTCTAGCTTAATAAGTTTGTTTCTTCTCCTTGATATAATc                                                                                                                           >  2:232225/1‑251 (MQ=255)                                                                                                                            atatatTGAATACTACAACAGCAGAAGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAagcggacctattttgataacgaggctttcccggatctcacgcctgaactgggcgcgttgaaaaatgaaggcctggatttcagccacacgcagcagctgccgggaacagattacacgattgcgggcatg                                                                                                                         >  2:433659‑M1/1‑123 (MQ=255)                                                                                                                              atatTGAATACTACAACAGCAGAAGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAatgcgaggctttttactatgctttatcttcgctcctggcgttcggatatttgcccgccgcgtgattcgcgttacacttgcggcctttagtatcctgccggagttgtcatgtctttttcctgtccactttg                                                                                                                       <  2:5598‑M2/251‑131 (MQ=255)                                                                                                                                atTGAATACTACAACAGCAGAAGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCGGTGAATACCTGAGACAAACAGTCTCAAGCACCCGTGGCTATTCTAGCTTAATAAGTTTGTTTCTTCTCCTTGATATAATCCTaaa                                                                                                                      >  1:28108/1‑250 (MQ=255)                                                                                                                                    aaTACTACAACAGCAGAAGAATTAGCCTGAAATTAAAAGGTCTGACTCAAATTGAATATCGGAATAAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCGGTGAATACCTGAGACAAACAGTCTCAAGCACCCGTGGCTATTCTAGCTTAATAAGTTTGTTTCTTCTCCTTGATATAATCCTAAAAAAAt                                                                                                                 >  2:17531/1‑251 (MQ=255)                                                                                                                                     aTACTCCAACAGCAGAAGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAatgcgaggctttttactatgctttatcttagctcctggcgttcggatatttgcccgccgcgtgattcgcgttacacttgcggcctttagtatcctgccggagttgtcatgtctttttcctgtccactttgccatc                                                                                                                  <  2:523514‑M2/249‑136 (MQ=255)                                                                                                                                       actacAACAGCAGAAGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCGGTGAATACCTGAGACAAACAGTCTCAAGCACCCGTGGCTATTCTAGCTTAATAAGTTTGTTTCTTCTCCTTGATATAATCCTAAAAAAAtct                                                                                                               <  2:372842/250‑1 (MQ=255)                                                                                                                                             acaGCAGAAGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCGGTGAATACCTGAGACAAACAGTCTCAAGCACCCGTGGCTATTCTAGCTTAATAAGTTTGTTTCTTCTCCTTGATATAATCCTAAAAAAATCTCATaaaa                                                                                                        <  1:85846/251‑1 (MQ=255)                                                                                                                                             aaagcagaaGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAatgcgaggctttttactatgctttatcttcgctcctggcgttcggatatttgcccgccgcgtgattcgcgttacacttgcggcctttagtatcctgccggaggtgtcatgtctttttcctgtccactttgcaatcagcctctttc                                                                                                        <  1:359815‑M2/249‑146 (MQ=255)                                                                                                                                                      gaaTTAGCCTGAAATTAAAAGGTCTAACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGCACAagcggacctattttgataacgaggctttcccggatctcacgactgaactgggcgcgttgaaaaatgaaggcctggatttcagccacacgcagaagctgccgggaacagattacacgattgcgggcatggtggcttctcagtgcggcataccgct                                                                                               >  1:381029‑M1/1‑97 (MQ=255)                                                                                                                                                          tAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAgcctgagactttctgttttcaggctaaccgggaatcagaaagacgaaggccccgaccgatatttctatcaaccgaggccaacgaatgaacctagcaattcagatcttagcctcttacccgccatccggcaaggagaaaggctatgaagcacaaccct                                                                                            >  1:428490‑M2/1‑93 (MQ=255)                                                                                                                                                          tAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAgcctgagactttctgttttcaggctaaccgggaatcagaaagacgaaggccccgaccgatatttctatcaaccgaggccaacgaatgaacctagcaattcagatctgagcctcttacccgccatccagcaaggagcaaggctatgaagcacaaccctc                                                                                           <  2:184283‑M2/251‑159 (MQ=255)                                                                                                                                                           aGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCGGTGAATACCTGAGACAAACAGTCTCAAGCACCCGTGGCTATTCTAGCTTAATAAGTTTGTTTCTTCTCCTTGATATAATCCTAAAAAAATCTCATAAAATTAATATATGAGAt                                                                                          <  1:112636/251‑1 (MQ=255)                                                                                                                                                                  aaTTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCGGTGAATACCTGAGACAAACAGTCTCAAGCACCCGTGGCTATTCTAGCTTAATAAGTTTGTTTCTTCTCCTTGATATAATCCTAAAAAAATCTCATAAAATTAATATATGAGATAATCttt                                                                                   <  1:269551/251‑1 (MQ=255)                                                                                                                                                                      aaaaGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAatgcgaggctttttactatgctttatcttcgctcctggcgttcggatatttgcccgccgcgtgattcgcgttacacttgcggcctttagtatcctgccggagttgtcatgtctttttcctgtccacttttccatcagcctctttcgcgtgaaaataacagctatatctg                                                                                >  2:317853‑M2/1‑81 (MQ=255)                                                                                                                                                                      aaaaGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAatgcgaggctttttactatgctttatcttcgctcctggcgttcggatatttgcccgccgcgtgattcgcgttacacttgcggcctttagtatcctgccggagttgtcatgtctttttcctgtccactttgccatcagcctctttcgcgtgaaaaaaacagctatatctgt                                                                               <  1:293723‑M2/251‑171 (MQ=255)                                                                                                                                                                        aaGGTCTGAATCCAATTGAATCTAGGAATCAGACCTATCTGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCGGTGACTACCTCAGACAAACAGTCTCAAGCACCCGTGGCTATTCTAGCTTAATAAGTTTGTTTCTTCTCCTTGATATAATCCTAAAAAACTCTCATAAAATTAATATATGAGATAATCTTTATNc                                                                               >  2:476589/1‑249 (MQ=255)                                                                                                                                                                         aGGTCTGACTCCAATTGAATATCGGCATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAatgcgaggctttttactatgctttatattcgctcctggcgatcggatatttgcccgccgcgcgattcgcgttacacttgcggccttttgtatcctgctcaagttgtcatgtctttttcctgcccactttcccatcagcgtctttcgcgcgaaaaaaacagccatatcagtccc                                                                            <  1:327850‑M2/251‑174 (MQ=255)                                                                                                                                                                               gACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAgcctgagactttctgttttcaggctaaccgggaatcagaaagacgaaggccccgaccgatatttctatcaaccgaggccaacgaatgaacctagcaattcagatcttagcctcttacccgccatccggcaaggagaaaggctatgaagcacaaccctctggtggtgtgtctgctca                                                                         >  1:54304‑M2/1‑72 (MQ=255)                                                                                                                                                                               gACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAgcctgagactttctgttttcaggctaaccgggaatcagaaagacgaaggccccgaccgatatttctatcaaccgaggccaacgaatgaacctagcaattcagatcttagcctcttacccgccatccggcaagg                                                                                                                    <  2:388227‑M2/205‑134 (MQ=255)                                                                                                                                                                               gACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAgcctgagactttctgttttcaggctaaccgggaatcagaaagacgaaggccccgaccgatatttctatcaaccgaggccaacgaatgaacctagcaattcagatcttagcctcttacccgccatccggcaagg                                                                                                                    >  1:388227‑M2/1‑72 (MQ=255)                                                                                                                                                                                aCTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAAATTTTTGGGGTCAGTACAatgcgaggctttttactatgctttatcttagctcctggcgttcggatatttgcccgccgcgtgattcgcgttacacttgcggcctttagtatcctgccggagttgtcatgtctttttcctgtccactttgccatcagcctctttcgcgtgaaaaaaacagctatatctgtccccagcgac                                                                     <  2:485613‑M2/251‑181 (MQ=255)                                                                                                                                                                                         gAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAatgcgaggctttttactatgctttatcttcgctcctggcgttcggatatttgcccgccgcgtgattcgcgttacacttgcggcctttagtatcctgccggagttgtcatgtctttttcctgtccactttgccatcagcctctttcgcgtgaaaaaaacagctatatctgtccccagcgacatcagttt                                                             >  1:83327‑M2/1‑62 (MQ=255)                                                                                                                                                                                             atCGGAATCAGACTTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAagcggacctattttgataactaggctttcccggatctcactcctgaactgggcgcgttgaaaaatgaaggcctggatttcagccacacgcagcagctgccgggaacagattacacgattgcgggcatggtggcttctcagtgcggcataccgctgtttgccccctttgaaggcaacgcctccgcctctgtct                                                         <  1:54451‑M1/250‑193 (MQ=255)                                                                                                                                                                                               cGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAgcctgagactttctgttttcaggctaaccgggaatcagaaagacgaaggccccgaccgatatttctatcaaccgaggccaacgaatgaacctagcaattcagatcttagcctcttacccgccatccggcaaggagaaaggctatgaagcacaaccctctggtggtgtgtctgctcattatctgcattacgattct                                                      >  1:131297‑M2/1‑56 (MQ=255)                                                                                                                                                                                               cGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCGGTGAATACCTGAGACAAACAGTCTCAAGCACCCGTGGCTATTCTAGCTTAATAAGTTTGTTTCTTCTCCTTGATATAATCCTAAAAAAATCTCATAAAATTAATATATGAGATAATCTTTATTCAGCAGAAGATTATTAAAGGTTGCTg                                                      >  2:519576/1‑251 (MQ=255)                                                                                                                                                                                                  aaTCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAagcggacctattttgataacgaggctttcccggatctcacgcctgaactgggcgcgttgaaaaatgaaggcctggatttcagccacacgcagcagctgccgggaacagattacacgattgcgggcatggtggcttctcagtgcggcataccgctgtttgccccctttgaaggcaacgcctccgcctctgtctccagct                                                   >  1:139723‑M1/1‑53 (MQ=255)                                                                                                                                                                                                   aTCAGGCCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACTTTGATTTATAGTCAGGTGAGGCTTTTCTCTGTCTGCCTTTCGGTGAATACCTGAGACAAACAGTCTCAAGCACCCGTGGCTATTCTAGCTTAATAAGTTTGTTTCTTCTCCTTGATATAATCCTAAAAAAATCGCATAAAATTAAGATATGAGATAATCTTTACTCAGCAGAAGATTATTAAAGGTTGCTGtatt                                                  <  1:440550/251‑1 (MQ=255)                                                                                                                                                                                                                         ttAACTGTCCAACTTTTTCGGGTCAGTACAgcctgagactttctgttttcaggctaaccgggaatcagaaagacgaaggccccgaccgatatttctatcaaccgaggccaacgaatgaacctagcaattcagatcttagcctcttacccgccatccggcaaggagaaaggctatgaagcacaaccctctggtggtgtgtctgctcattatctgcattacgattctgacattcacactcctgacccgacaa                             <  1:459641‑M2/250‑221 (MQ=255)                                                                                                                                                                                                                           aaCTGTCCAACTTTTTGGGGTCAGTACAgcctgagactttctgttttcaggctaaccgggaatcagaaagacgaaggccccgaccgatatttctatcaaccgaggccaacgaatgaacctagcaattcagatcttagcctcttacccgccatccggcaaggagaaaggctatgaagcacaaccctctggtggtgtgtctgctcattatctgcattacgattctgacattcacactcctgacccgacaaac                           >  1:110223‑M2/1‑28 (MQ=255)                                                                                                                                                                                                                               gTCCAACTTTTTGGGGTCAGTACAAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCGGTGAATACCTGAGACAAACAGTCTCAAGCACCCGTGGCTATTCTAGCTTAATAAGTTTGTTTCTTCTCCTTGATATAATCCTAAAAAAATCTCATAAAATTAATATATGAGATAATCTTTATTCAGCAGAAGATTATTAAAGGTTGCTGTATTATTTAGCGATAAAAAAAGCCTGCCAg                        <  1:471518/249‑1 (MQ=255)                                                                                                                                                                                                                                        tttGGGGTCAGTACAagcggacctattttgataacgaggctttcccggatctcacgcctgaactgggcgcgttgaaaaatgaaggcctggatttcagccacacgcagcagctgccgggaacagattacacgattgcgggcatggtggcttctcagtgcggcataccgctgtttgccccctttgaaggcaacgcctccgcctctgtctccagcttcttcccgcagaacatctgtctgggagatatcctgaa              >  1:216159‑M1/1‑15 (MQ=255)                                                                                                                                                                                                                                          tGGGGTCAGTACAAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCGGTGAATACCTGAGACAAACAGTCTCAAGCACCCGTGGCTATTCTAGCTTAATAAGTTTGTTTCTTCTCCTTGATATAATCCTAAAAAAATCTCATAAAATTAATATATGAGATAATCTTTATTCAGCAGAAGATTATTAAAGGTTGCTGTATTATTTAGCGATAAAAAAAGCCTGCCAGATGGCAGGCTAt            <  1:153283/250‑1 (MQ=255)                                                                                                                                                                                                                                              gTCAGTACAatgcgaggctttttactatgctttatcttcgctcctggcgttcggatatttgcccgccgcgtgattcgagttacacttgcggcctttaggatcctgccggagttgtcatgtctttttcctgtccactttgccatcagcctctttcgcgtgaaaaaaacagctatatctgtccccagcgacatcagtttgatatggcgtaagaagggtatgtcaatctgctgcccgttcagcataaacggtct       <  2:340156‑M2/251‑243 (MQ=255)                                                                                                                                                                                                                                                 aGTACAagcggacctattttgataacgaggctttcccggatctcacgcctgaactgggcgcgttgaaaaatgaaggcctggatttcagccacacgcagcagctgccgggaacagattacacgattgcgggcatggtggcttctcagtgcggcataccgctgtttgccccctttgaaggcaacgcctccgcctctgtctccagcttcttcccgcagaacatctgtctgggagatatcctgaaaaactcgggt    <  1:373389‑M1/251‑246 (MQ=255)                                                                                                                                                                                                                                                    aCAgcctgagactttctgtttgcaggctaaccgagaatcagaaagacgaaggccccgaccgatatttctatcaaccgaggccaacgaatgaacctagcaattcagatcttagcctcttacccgccatccggcaaggagaaaggctatgaagcacaaccctctggtggtgtgtctgctcattatctgcattacgattctgacattcacactcctgacccgacaaacgctctacgaactgcggttccgggac  >  1:264999‑M2/1‑3 (MQ=255)                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                        GTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGTGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGATGCTGTTACGGAATATATTGAATACTACAACAGCAGAAGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCGGTGAATACCTGAGACAAACAGTCTCAAGCACCCGTGGCTATTCTAGCTTAATAAGTTTGTTTCTTCTCCTTGATATAATCCTAAAAAAATCTCATAAAATTAATATATGAGATAATCTTTATTCAGCAGAAGATTATTAAAGGTTGCTGTATTATTTAGCGATAAAAAAAGCCTGCCAGATGGCAGGCTATTTAATAACGG  >  NC_000913/3721830‑3722322

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.