New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 689045NA (NA)37 (0.780) 35/488 0.4 50.7% noncoding (1/1195 nt) IS5 repeat region
?NC_000913 758570 = 36 (0.750)intergenic (+165/‑136) sdhB/sucA succinate:quinone oxidoreductase, iron‑sulfur cluster binding protein/subunit of E1(0) component of 2‑oxoglutarate dehydrogenase

GCGTCAGTGTATGTCCGAAGGGGCTGAACCCGACGCGCGCCATCGGCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTCATTACCCGTAGGCCTGATAAGCGCAGCGCATCAGGCGTAACAAAGAAATGCAGGAAATCTTTAAAAACTGCCCCTGACACTAAGACAGTTTTTAAAGGTTCCTTCGCGAGCCACTACGTAGACAAGAGCTCGCAAGTGAACCCCGGCACGCACATCACTGTGCGTGGTAGTATCCACGGCGAAGTAAGCATAAAAAAGATGCTTAAGGGATCACGATGCAGAACAGCGCTTTGAAAGCCTGGTTGGACTCTTCTTACCTCTCTGGCGCAAACCAGAGCTGGATAGAACAGCTCTATGAAGACTTCTTAACCGATCCTGACTCGGTTGAC  >  NC_000913/758323‑758819
                                                                                                                                                                                                                                                         |                                                                                                                                                                                                                                                          
gcatggtttccagcggataaggtcgccggccattaccagccttggggtaaaacggctcgatgacttccaccatgttttgccatggcagaatctgctccatgcgggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCt                                                                                                                                                                                                                                                           <  1:349331‑M2/2‑1 (MQ=255)
gcanggtttccagcggataaggtcgccggccattaccagccttggggtaaaacggctcgatgacttccaccatgttttgccatggcagaatctgctccatgcgggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCt                                                                                                                                                                                                                                                           <  2:483571‑M2/2‑1 (MQ=255)
  gTCAGTGTATGTCCGAAGGGGCTGAACCCGACGCGCGCCATCGGCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTCATTACCCGTAGGCCTGATAAGCGCAGCGCATCAGGCGTAACAAAGAAATGCAGGAAATCTTTAAAAACTGCCCCTGACACTAAGa                                                                                                                                                                                                                                                       <  2:279135/251‑1 (MQ=255)
     aGTGTATGTCCGAAGGGGCTGAACCCGACGCGCGCCATCGGCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTCATTACCCGTAGGCCTGATAAGCGCAGCGCATCAGGCGTAACAAAGAAATGCAGGAAATCTTTAAAAACTGCCCCTGACACTAAGAc                                                                                                                                                                                                                                                      >  2:312774/1‑249 (MQ=255)
         tATGTCCGAAGGGGCTGAACCCGACGCGCGCCATCGGCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTCATTACCCGTAGGCCTGATAAGCGCAGCGCATCAGGCGTAACAAAGAAATGCAGGAAATCTTTAAAAAATGCCCCTGACACTAAGACAGtttt                                                                                                                                                                                                                                                >  1:95470/1‑251 (MQ=255)
                  gggngCTGAACCCGACGCGCGCCATCGGCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTCATTACCCGTAGGCCTGATAAGCGCAGCGCATCAGGCGTAACAAAGAAATGCAGGAAATCTTTAAAAACTGCCCCTGACACTAAGACAGTTTTTAAAGGTTc                                                                                                                                                                                                                                       <  2:475178/250‑1 (MQ=255)
                  aaggtcgccggccattaccagccttggggtaaaacggctcgatgacttccaccatgttttgccatggcagaatctgctccatgcgggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGACAGTTTTTAAAGGt                                                                                                                                                                                                                                         >  2:345924‑M2/232‑251 (MQ=255)
                    ggtcgccggccattaccagccttggggtaaaacggctcgatgacttccaccatgttttgccatggcagaatctgctccatgcgggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGACAGTTTGTAAAGGTTc                                                                                                                                                                                                                                       <  2:524709‑M2/22‑1 (MQ=255)
                       cgccggccattaccagccttggggtaaaacggctcgatgacttccaccatgttttgccatggcagaatctgctccatgcgggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGACAGTTTTTAAAGGTTCCtt                                                                                                                                                                                                                                   >  2:32910‑M2/227‑251 (MQ=255)
                        gccggccattaccagccttggggtaaaacggctcgatgacttccaccatgttttgccatggcagaatctgctccatgcgggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGACAGTTTTTAAAGGTTCCTTc                                                                                                                                                                                                                                  <  1:31235‑M2/26‑1 (MQ=255)
                                 taccagccttggggtaaaacggctcgatggcttccaccatgttttgccagcgcagaatctgctccatgcgggacaagaaactctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgcctcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGACAGTTTTTAAAGgttccttcgctggcccc                                                                                                                                                                                                                         >  1:39873‑M2/217‑244 (MQ=255)
                                  accagccttggggtaaaacggcgcgatgccttccaccatgttttgccatggcagaatctgctccatgcgggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaacccttttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGCCAGTTTTTAAAGGTTCCTTCGCGAGCCAc                                                                                                                                                                                                                         <  2:82340‑M2/35‑1 (MQ=255)
                                     agccttggggtaaaacggctcgatgacttccaccatgttttgccatggcagaatctgctccatgcgggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggaaagttgatgactcatgatgaaccctgttctatggctcccgatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGACAGTTTTTAAAGGTTCCTTCGCGAGCCACTACg                                                                                                                                                                                                                     >  1:274444‑M2/213‑251 (MQ=255)
                                          ccGGCCATATCAATTCGTTGTTTTTGAAACGTAATGGGTAACCCTTAGTCCTAATAAGACGCGCAAGCGTCCCCTCAGGCACCATGTGCCGGATGCGGCGTAACCCCCTTATCCGGCCTACAAGTCATTCCCCGTAGGCCTGATAAGCGCATCGCATCAGGCGTAACAAAGAAATGCAGGAAATCTTTAAAAACTGCCCCTTACACAAAGACAGTTTTTAAAGGTTCCTTCTCGAGCCACTACGTAGACaa                                                                                                                                                                                                              <  1:24963/250‑1 (MQ=255)
                                              ccATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTACGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGAGTGAACGCCTTATCCGGCCTACAAGTCATTAACCGTAGGAATGATAAGCGCAGCGCATCAGGCGTAACAAAGAAATGCAGGAAATCTTTAAAAACTGCCCCTGACACTAAGACAGTTTTTAAAGGATCCTTCGCGAGCCACTAAGAAGACAAGAGc                                                                                                                                                                                                          >  2:126490/1‑251 (MQ=255)
                                               cATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGAGTCGCATAAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTCTCCGGCCTACAAGTCATTACCCGTATGCCTGATAAGCGCAGCGCAACAGGCGTAACAAAGAAATGCAGGAAAACTTTAAAAAATGACCCTGACACTAAGACAGATTTTAAAGGTTACTTCCAGAGACAATACGTAGACAAGAGCt                                                                                                                                                                                                         >  2:137004/1‑251 (MQ=255)
                                                  atCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTCATTACCCGTAGGCCTGATAAGCGCAGCGCATCAGGCGTAACAAAGAAATGCAGGAAATCTTTAAAAACTGCCCCTGACACTAAGACAGTTTTTAAAGGTTCCTTCGCGAGCCACTACGTAGACAAGAGCTCGc                                                                                                                                                                                                      >  1:112481/1‑251 (MQ=255)
                                                            tgttgtTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTCATTACCCGTAGGCCTGATAAGCGCAGCGCATCAGGCGTAACAAAGAAATGCAGGAAATCTTTAAAAACTGCCCCTGACACTAAGACAGTTTTTAAAGGTTCCTTCGCGAGCCACTACGTAGACAAGAGCTCGCAAGTGAAccc                                                                                                                                                                                            >  2:396699/1‑251 (MQ=255)
                                                             gttgttGCAACGTAATGCGTAAACCGTAAGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTATGCGGACTACAAGTCATTACCCGTAAGCCTGCTAAGCGCAGAGCATCAGGCGTAACAAAGAAATGCAGGAAATCTTTAAAAACTGCCCCTGACACTAAGACAGTTTTTAAAGGTTCCTTCGCGAGCCACTACGTAGACAAGAGCTCGCAAGTGAAcccc                                                                                                                                                                                           >  1:238770/1‑251 (MQ=255)
                                                             gacttccaccatgttttgccatggcagaatctgctccatgcgggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGACAGTTTTTAAAGGTTCCTTCGCGAGCCACTACGTAGACAAGAGCTCGCAAGTGAAcc                                                                                                                                                                                             >  2:154630‑M2/189‑251 (MQ=255)
                                                                 tccaccatgttttgccatggcagaatctgctccatgcgggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGACAGTTTTTAAAGGTTCCTTCGCGAGCCACTACGTAGACAAGAGCTCGCAAGTGAACCCCgg                                                                                                                                                                                         >  1:371266‑M2/185‑251 (MQ=255)
                                                                  ccaccatgttttgccatggcagaatctgctccatgcgggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGACAGTTTTTAAAGGTTCCTTCGCGAGCCACTACGTAGACAAGAGCTCGCAAGTGAACCCCGgc                                                                                                                                                                                        >  1:267833‑M2/184‑251 (MQ=255)
                                                                   caccatgttttgccatggcagaatctgctccatgcgggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGACAGTTTTTAAAGGTTCCTTCGCGAGCCACTACGTAGACAAGAGCTCGCAAGTGAACCCCGgc                                                                                                                                                                                        >  1:446653‑M2/183‑250 (MQ=255)
                                                                           tttgccatggcagaatctgctccatgcgggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGACAGTTTTTAAAGGTTCCTTCGCGAGCCACTACGTAGACAAGAGCTCGCAAGTGAACCCCGGCACGCACATc                                                                                                                                                                               >  2:452815‑M2/175‑251 (MQ=255)
                                                                           aTGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTCATTACCCGTAGGCCTGATAAGCGCAGCGCATCAGGCGTAACAAAGAAATGCAGGAAATCTTTAAAAACTGCCCCTGACACTAAGACAGTTTTTAAAGGTTCCTTCGCGAGCCACTACGTAGACAAGAGCTCGCAAGTGAACCCCGGCACGCACATCAc                                                                                                                                                                             >  2:396885/1‑251 (MQ=255)
                                                                             tgccatggcagaatctgctccatgcgggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGACAGTTTTTAAAGGTTCCTTCGCGAGCCACTACGTAGACAAGAGCTCGCAAGTGAACCCCGGCACGCACATCAc                                                                                                                                                                             >  1:106860‑M2/173‑251 (MQ=255)
                                                                                       gaGGCCGGATAAGACGCGCAAGCGGCGCATCAGCCAACCAGGGCCGGATGCGGCGTAAACGCTTTATCCGGCCTAAAAGTCATTACCCGTAGGCCTGATAAGCGCAGCGCATCGGGCGTAAAAAAGAAATGCAGAAAATTTTTAAAAACTCCCCCTGACACTAAGACAGTTTTTAAAGGTTCCTTCGCGAGCCACTACGTAGACAAGAGCTCGCAAGTGAACCCCGGCACGCACATCACTGTGCGTGgtag                                                                                                                                                                 <  2:370785/250‑1 (MQ=255)
                                                                                         atctgctccatgcgggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgacggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGACAGTTTTTAAAGGTTCCTTCGCGAGCCACTACGTAGACAAGAGCTCGCAAGTGAACCCCGGCACGCACATCACTGTGCGTGgt                                                                                                                                                                   >  1:218530‑M2/161‑249 (MQ=255)
                                                                                                 aggccgggcAAGCGTCGCATCAGGCAACCGGGGCGGGAGGGGGGGGGACCGCCTTACCCGGCCAAAAATTCATTCCCGGTAGGCCTGAAAGGCGCAGCGCACCGGGCGAAAAAAAAAAATGAAGAAAATCTTTAAAACCTCCCCCTGACACAAAGACAGTTTTTAAAGGTCCCTCCGCGAGCCACTACGTAGACAAGAGCTCGCAAGTGAACCCCGGCACGCACATCACTGTGCGTGGTAGTATCCACGGc                                                                                                                                                       <  2:49563/244‑1 (MQ=255)
                                                                                                 aaGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTAAACGCCTTACCCGGCTTACAATTCATTACCCGTAGGCCTGATAAGCGCAGCGCATCAGGCGTAAAAAAAAAATGCAGGAAATCTTTAAAAACTGCCCCTGACACTAAGACAGTTTTTAAAGGTTCCTTCGCGAGCCACTACGTAGACAAGAGCTCGCAAGTGAACCCCGGCACGCACATCACTGTGCGTGGTAGTATCCACGGc                                                                                                                                                       <  1:385649/251‑1 (MQ=255)
                                                                                                   ggcgggagaagaaaatctcttttctggtttgacggctctttctgctgaattcccttgcggcgaaggtaagttgatgaatcatgatgacccctgttctatggctccagatgacaaacatgatctcatttcagggacttgtccgccccttccCTAAGACATTTTTTAAAGGTTCCTTCGCGAGCCACTACGTAGACAAGAGCTCGCAAGTGAACCCCGGCACGCACATCACTGTGCGTGGTAGTATCCACGGc                                                                                                                                                       <  1:383552‑M2/101‑1 (MQ=255)
                                                                                                        gacaagaaaatctcttttcgggtctgacggcgcttactgctgaattcactgtcggagaaggtaagttgatgactcatgatgaaccgtgttctatggctccagatgacaaacatgatctcatatcagggatttgttcgcaccttccCTAAGACAGTTTTTAAAGGTTCCTGCGCGAGCCACTACGTAGACAAGAGCTCGCAAGTGAACCCCGGCACGCACATCACTGTGCGTGGTAGTATCCACGGCGAAGt                                                                                                                                                  <  1:293602‑M2/106‑1 (MQ=255)
                                                                                                         cAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTCATTCCCCGTAGGCTTGATAAGCCCAGCGCATCAGGCGTAAAAAAAAAAGGCAGGAAATCTTTAAAAACTGCCCCTGACACTAAGCCAGTTTTTAAAGTTTCCTTCGCGAGCCACTACGTAGACAAGAGCTCGCAAATGAACCCCGGCACGCACATCACTGTGCGTGGTAGTATCCACGGCGAAGTAAg                                                                                                                                               <  1:434991/251‑1 (MQ=255)
                                                                                                              gTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTCATTACCCGTAGGCCTGATAAGCGCAGCGCATCAGGCGTAACAAAGAAATGCAGGAAATCTTTAAAAACTGCCCCTGACACTAAGACAGTTTTTAAAGGTTCCTTCGCGAGCCACTACGTAGACAAGAGCTCGCAAGTGAACCCCGGCACGCACATCACTGTGCGTGGTAGTATCCACGGCGAAGTAAGCATa                                                                                                                                           >  2:286423/1‑250 (MQ=255)
                                                                                                               ccGCATCAGGCACCAGTTGCGGGGTGGGGCGGAAACGCCTTACCCGGACAAAAATTCATTCCCCGGAGGCCGAAGAAGCCCAGCGAATCAGGTGAAAAAAAAAAAGGCAGAAAATTTTAAAAAACTCCCCCTTACACAAAGACTTTTTGAAAAGGTCCCTCCGTGAGCCACTACGTAGACAAGAGCTCGCAAGTGAACCCCGGCACGCACATCACTGTGCGTGGTAGTATCCACGGCGAAGTAAGCATaaa                                                                                                                                         <  2:331810/250‑1 (MQ=255)
                                                                                                                       tttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGACAGTTTTTAAAGGTTCCTTCGCGGGCCACTACGTAGACAAGAGCTCGCAAGTGAACCCCGGCACGCACATCACTGTGCGTGGTAGTATCCACGGCGAAGTAAGCATaaaaaa                                                                                                                                      <  1:170266‑M2/118‑1 (MQ=255)
                                                                                                                           aCCAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTCATTCCCCGTAGGCCTGATAAGCGCAGCGCATCAGGCGTAACAAAGAAATGCAGGAAATCTTTAAAAACTGCCCCTGACACTAAGACAGTTTTTAAAGGTTCCTTCGCGAGCCACTACGTAGACAAGAGCTCGCAAGTGAACCCCGGCACGCACATCACTGTGCGTGGTAGTATCCACGGCGAAGTAAGCATAAAAAAGATGCTTaa                                                                                                                             <  1:396699/251‑1 (MQ=255)
                                                                                                                            ggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGACAGTTTTTAAAGGTTCCTTCGCGAGCCACTACGTAGACAAGAGCTCGCAAGTGAACCCCGGCACGCACATCACTGTGCGTGGTAGTATCCACGGCGAAGTAAGCATAAAAAAGATGCtt                                                                                                                               >  2:75882‑M2/126‑250 (MQ=255)
                                                                                                                             cAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTCATTACCCGTAGGCCTGATAAGCGCAGCGCATCAGGCGTAACAAAGAAATGCAGGAAATCTTTAAAAACTGCCCCTGACACTAAGACAGTTTTTAAAGGTTCCTTCGCGAGCCACTACGTAGACAAGAGCTCGCAAGTGAACCCCGGCACGCACATCACTGTGCGTGGTAGTATCCACGGCGAAGTAAGCATAAAAAAGATGCTTAAgg                                                                                                                           >  2:520811/1‑251 (MQ=255)
                                                                                                                              caggtgcggggggcggctTGATCGCCTTACCCGGCCAACAAGTCATTACCCGTAGGCCGAAAAAGCGCGGCCCACCAGGAGTAACAAAAAAATGCAGGAAATCTTAAAAACCGGCCCCGGCCAATAAGACAGTTTTAAAAGTTTCCTCCGCGAGCCACTACGTAGACAAGAGCGCGCAAGTGAACCCCGGCACGCACATCACTGTGCGTGGTAGTATCCACGGCGAAGTAAGCATAAAAAAGATGCTTAAg                                                                                                                            <  2:485591/239‑1 (MQ=255)
                                                                                                                                 gacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgacccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGACAGTTTTTAAAGGTTCCTTCGCGAGCCACTACGTAGACAAGAGCTCGCAAGTGAACCCCGGCACGCACATCACTGTGCGTGGTAGTATCCACGGCGAAGTAAGCATAAAAAAGATGCTTAAg                                                                                                                            <  1:222699‑M2/128‑1 (MQ=255)
                                                                                                                                  agggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgacccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcacctcccCTAAGACAGTTTTAAAAGGTCCCTGCGCGAGCCACTACGTAGACAAGAGCTCGCAAGTGAACCCCGGCACGCACATCACTGTGCGTGGTAGTATCCACGGCGAAGTAAGCATAAAAAAGATGCTTAAGGGAt                                                                                                                        <  1:73383‑M2/132‑1 (MQ=255)
                                                                                                                                    ggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgccccttccCTAAGACATTTTTAAAAGTTTCCTTCGCGAGCCACTACGTAGACAAGAGCTCGCAAGTGAACCCCGGCACGCACATCACTGTGCGTGGTAGTATCCACGGCGAAGTAAGCATAAAAAAGATGCTTAAGGGATCa                                                                                                                      <  1:245368‑M2/134‑1 (MQ=255)
                                                                                                                                    cgggATGCGGCGTAACCCCCTTACCCGGCCTACACTTCTTTCCCAGAAGGCCTGATAGGCGCAGCTCATAAGGCGAAACAAAAAAATGCAGGAAATCTTCAAAACCTCCCCCGTCCACTAAGACCGTTTTTAAAGGTTCCTTCGCGAGCCACTATGTAGACAAGAGCTCGCAAGTGACCCCCGGCACGCACATCACTGTGCGTGGTAGTATCCACGGCGAAGTAAGCATAAAAAAGATGCTTAATGGATCa                                                                                                                      <  1:396444/249‑1 (MQ=255)
                                                                                                                                       gcttacagctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctacagatgacaaacatgatctcatatcagggacttgttagcaccttccCTAAGACAGTGTTTAAAGGTTCCTTCGCGAGCCACTACGTAGACAAGAGCTCGCAAGTGAACCCCGGCACGCACATCACTGTGCGTGGTAGTATCCACGGCGAAGTAAGCATAAAAAAGATGATTAAGGGATCACg                                                                                                                    >  1:421481‑M2/115‑250 (MQ=255)
                                                                                                                                         tttctcctaaattcactgtcgtcgaaggtaagttgatgtctcttgattcacccttttttttggccccatatgacaaacatgatctcatatcaggtacttgttcgccctttccCTAAGACATTTTTTAAAGGTTCCTTCGCGAGCCACTACGTAGACAAGAGCTCGCAAGTGAACCCCGGCACGCACATCACTGTGCGTGGTAGTATCCACGGCGAAGTAAGCATAAAAAAGATGCTTAAGGGATCACGAt                                                                                                                  <  2:267833‑M2/138‑1 (MQ=255)
                                                                                                                                           acttctgaattcactgtgggagaaggtaagtggatgactcatgatgaaccctttttattgcctcaagatacaaaacaggatctcatatcagggacttgttcgcaccttccCTAGGACATTTTTTAAAGGTCCCTTCGCGAGCCACTACGTAGACAAGAGCTCGCAAGTGAACCCCGGCACGCACATCACTGTGCGTGGTAGTATCCACGGCGAAGTAAGCATAAAAAAGATGCTTAAGGGATCACGATGCa                                                                                                               <  2:523456‑M2/141‑1 (MQ=255)
                                                                                                                                               gTGAACGCCTTATCCGGCCTACAAGTCATTACCCGTAGGCCTGATAAGCGCAGCGCATCAGGCGTAACAAAGAAATGCAGGAAATCTTTAAAAACTGCCCCTGACACTAAGACAGTTTTTAAAGGTTCCTTCGCGAGCCACTACGTAGACAAGAGCTCGCAAGTGAACCCCGGCACGCACATCACTGTGCGTGGTAGTATCCACGGCGAAGTAAGCATAAAAAAGATGCTTAAGGGATCACGATGCAGAAc                                                                                                           >  1:107696/1‑251 (MQ=255)
                                                                                                                                                 gAACGCCTTATCCGGCCTACAAGTCATTACCCGTAGGCCTGATAAGCGCAGCGCATCAGGCGTAACAAAGAAATGCAGGAAATCTTTAAAAACTGCCCCTGACACTAAGACAGTTTTTAAAGGTTCCTTCGCGAGCCACTACGTAGACAAGAGCTCGCAAGTGAACCCCGGCACGCACATCACTGTGCGTGGTAGTATCCACGGCGAAGTAAGCATAAAAAAGATGCTTAAGGGATCACGATGCAGAAc                                                                                                           >  1:105427/1‑249 (MQ=255)
                                                                                                                                                  aattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGACAGTTTTTAAAGGTTCCTTCGCGAGCCACTACGTAGACAAGAGCTCGCAAGTGAACCCCGGCACGCACATCACTGTGCGTGGTAGTATCCACGGCGAAGTAAGCATAAAAAAGATGCTTAAGGGATCACGATGCAGAACAgc                                                                                                        >  2:121898‑M2/104‑251 (MQ=255)
                                                                                                                                                   attcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGACAGTTTTTAAAGGTTCCTTCGCGAGCCACTACGTAGACAAGAGCTCGCAAGTGAACCCCGGCACGCACATCACTGTGCGTGGTAGTATCCACGGCGAAGTAAGCATAAAAAAGATGCTTAAGGGATCACGATGCAGAACAgcg                                                                                                       >  1:246808‑M2/103‑251 (MQ=255)
                                                                                                                                                                cataaaaGTCATTCCCCGTGGGCCTGATAAGCGCAGCGCAGCAGGCGAAAAAAAGAAATGCAGGAAATCTTTAAAACCTGCCCCTGACACTAAGACAGTTTTTAAAGGTTCCTTCGCGAGCCACTACGTAGACAAGAGCTCGCAAGTGAACCCCGGCACGCACATCACTGTGCGTGGTAGTATCCACGGCGAAGTAAGCATAAAAAAGATGCTTAAGGGATCACGATGCAGAACAGCGCTTTGAAAGCCTg                                                                                          <  1:265905/246‑1 (MQ=255)
                                                                                                                                                                 aagttaagtttatgacccatgtgtaaccctgttctatggctccaaatgacaaccatgatctcatatcagcgccttgttcccgcctcccCTAAGACAGTTTTTAAAGGTCCCTTCCCGGGCCACTACGTAGACAAGAGCTCGCAAGTGAACCCCGGCACGCACATCACTGTGCGTGGTAGTATCCACGGCGAAGTAAGCATAAAAAAGATGCTTAAGGGATCACGATGCAGAACAGCGCTTTGAAAGCCTgg                                                                                         <  1:115465‑M2/163‑1 (MQ=255)
                                                                                                                                                                     aaGTCATTACCCGTAGGCCTGATAAGCGCAGCGCATCAGGCGTAACAAAGAAATGCAGGAAATCTTTAAAAACTGCCCCTGAACCTAAGAAGGTTTTTAAAGATTCCTTCCCGAGCAACTACGTAAACAAGAGCTCGCAAGTGAACCCCGGCACGCACATAACTGTGCGTGGTAGTATCAACGGCGAAGTAAGCATAAAAAAGATGCTTAAGGGACAACGTTGCAGACCGGCGCTTGGAAGGCCAGGTTgg                                                                                     >  2:407555/1‑251 (MQ=255)
                                                                                                                                                                        tCATTACCCGTAGGCCTGATAAGCGCAGCGCATCCGGCGTAACAAAGAAATGCAGGAAATCTTTAAAAACTGCCCCTGACACTAAGACAGTTTTTAAAGGTTCCTTCGCGAGCCACTACGTAGACAAGAGCTCGCAAGTGAACCCCGGCACGCACATCACTGTGCGTGGTAGTATCCACGGCGAAGTAAGCATAAAAAAGATGCTTAAGGGATCACGATGCAGAACAGCGCTTTGAAAGCCTGGTTGGAct                                                                                  >  1:154795/1‑251 (MQ=255)
                                                                                                                                                                            tACCCGTAGGCCTGATAAGCGCAGCGCATCAGGCGTAACAAAGAAATGCAGGAAATCTTTAAAAACTGCCCCTGACACTAAGACAGTTTTTAAAGGTTCCTTCGCGAGCCACTACGTAGACAAGAGCTCGCAAGTGAACCCCGGCACGCACATCACTGTGCGTGGTAGTATCCACGGCGAAGTAAGCATAAAAAAGATGCTTAAGGGATCACGATGCAGAACAGCGCTTTGAAAGCCTGGTTGGACtcttc                                                                              >  2:265985/1‑251 (MQ=255)
                                                                                                                                                                                  tAGGCCTGATAAGCGCAGCGCATCAGGCGTAACAAAGAACTGCAGGAAATCTTTAAAAACTGCCCCTGACACTAAGACAGTTTTTAAAGGTTCCTTCGCGAGCCACTACGTAGACAAGAGCTCGCAAGTGAACCCCGGCACGCACATCACTGTGCGTGGTAGTATCCACGGCGAAGTAAGCATAAAAAAGATGCTTAAGGGATCACGATGCAGAACAGCGCTTTGAAAGCCTGGTTGGACTCTTCTTACct                                                                        >  2:256462/1‑251 (MQ=255)
                                                                                                                                                                                  catgataaccccggttctagggctcgagataacaaaattgatttcatatcggggctttttgcgcacctcccCAAGGACAGTTTATAAAGGTTCCTACGCGAGCCACTACGTAGACAAGAGCTCGCAAGTGAACCCCGGCACGCACATCACTGTGCGTGGTAGTATCCACGGCGAAGTAAGCATAAAAAAGATGCTTAAGGGATCACGATGCAGAACAGCGCTTTGAAAGCCTGGTTGGACTCTTCTTACct                                                                        <  2:91952‑M2/180‑1 (MQ=255)
                                                                                                                                                                                                 tctttggctcaatacgacaaacataatctcatattagggacttgttcgcaccttccTTAAAACATTTTTTAAAGTTTCCTTCGCGAGCCACTACGTAGACAAGAGCTCGCAAGTGAACCCCGGCACGCACATCACTGTGCGTGGTAGTATCCACGGCGAAGTAAGCATAAAAAAGATGCTTAAGGGATCACGATGCAGAACAGCGCTTTGAAAGCCTGGTTGGACTCTTCTTACCTCTCTGGCGCAAAcc                                                          <  1:345924‑M2/194‑1 (MQ=255)
                                                                                                                                                                                                   tatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGACAGTTTTTAAAGGTTCCTTCGCGAGCCACTACGTAGACAAGAGCTCGCAAGTGAACCCCGGCACGCACATCACTGTGCGTGGTAGTATCCACGGCGAAGTAAGCATAAAAAAGATGCTTAAGGGATCACGATGCAGAACAGCGCTTTGAAAGCCTGGTTGGACTCTTCTTACCTCTCTGGCGCAAAcc                                                          >  2:122271‑M2/55‑248 (MQ=255)
                                                                                                                                                                                                     gcaTCAGGCGTAACAAAGAAATGCAGGAAATCTTTAAAAACTGCCCCTGACACTAAGACAGTTTTTAAAGGTTCCTTCGCGAGCCACTACGTAGACAAGAGCTCGCAAGTGAACCCCGGCACGCACATCACTGTGCGTGGTAGTATCCACGGCGAAGTAAGCATAAAAAAGATGCTTAAGGGATCACGATGCAGCACAGCGCTTTGAAAGCCTGGTTGGACTCTTCTTACCTCTCTGGCGCAAACCAGAGc                                                     >  1:441874/1‑251 (MQ=255)
                                                                                                                                                                                                           cagatgacaaacaggatctcatatcagggacttgtgcgcaccttccATAAGACATTTTTTAAGGTTTCCTTCGCGAGCCACTACGTAGACAAGAGCTCGCAAGTGAACCCCGGCACGCACATCACTGTGCGTGGTAGTATCCACGGCGAAGTAAGCATAAAAAAGATGCTTAAGGGATCACGATGCAGAACAGCGCTTTGAAAGCCTGGTTGGACTCTTCTTACCTCTCTGGCGCAAACCAGAGCTGGATa                                               <  1:440396‑M2/205‑1 (MQ=255)
                                                                                                                                                                                                             cGTAACAAAGAAATGCAGGAAATCTTTAAAAACTGCCCCTGACACTAAGACAGTTTTTAAAGGTTCCTTCGCGAGCCACTACGTAGACAAGAGCTCGCAAGTGAACCCCGGCACGCACATCACTGTGCGTGGTAGTATCCACGGCGAAGTAAGCATAAAAAAGATGCTTAAGGGATCACGATGCAGAACAGCGCTTTGAAAGCCTGGTTGGACTCTTCTTACCTCTCTGGCGCAAACCAGAGCTGGAt                                                >  1:87247/1‑248 (MQ=255)
                                                                                                                                                                                                                aaCAAAGAAATGCAGGAAATCTTTAAAAACTGCCCCTGACACTAAGACAGTTTTTAAAGGTTCCTTCGCGAGCCACTACGTAGACAAGAGCTCGCAAGTGAACCCCGGCACGCACATCACTGTGCGTGGTAGTATCCACGGCGAAGTAAGCATAAAAAAGATGCTTAAGGGATCACGATGCAGAACAGCGCTTTGAAAGCCTGGTTGGACTCTTCTTACCTCTCTGGCGCAAACCAGAGCTGGATAGAAc                                           >  1:158164/1‑250 (MQ=255)
                                                                                                                                                                                                                   aaacatgatctcatatcagggacttgttcgcaccttccCTAAGACAGTTTTTAAAGGTTCCTTCGCGAGCCACTACGTAGACAAGAGCTCGCAAGTGAACCCCGGCACGCACATCACTGTGCGTGGTAGTATCCACGGCGAAGTAAGCATAAAAAAGATGCTTAAGGGATCACGATGCAGAACAGCGCTTTGAAAGCCTGGTTGGACTCTTCTTACCTCTCTGGCGCAAACCAGAGCTGGATAGAACAGct                                       >  1:219267‑M2/39‑251 (MQ=255)
                                                                                                                                                                                                                   aaaaaaaTGAAGGAAATCTTAAAAAACTGCCCCTGACACAAAAACATTTTTAAAAGTTCCCTTCGCGAGCCACTACGTAGACAAGAGCTCGCAAGTGAACCCCGGCACGCACATCACTGTGCGTGGTAGTATCCACGGCGAAGTAAGCATAAAAAAGATGCTTAAGGGATCACGATGCAGAACAGCGCTTTGAAAGCCTGGTTGGACTCTTCTTACCTCTCTGGCGCAAACCAGAGCTGGATAGAACAGct                                       <  2:95470/247‑1 (MQ=255)
                                                                                                                                                                                                                    aaGAAATGCAGGAAATCTTTAAAAACTGCCCCTGACACTAAGACAGTTTTTAAAGGTTCCTTCGCGAGCCACTACGTAGACAAGAGCTCGCAAGTGAACCCCGGCACGCACATCACTGTGCGTGGTAGTATCCACGGCGAAGTAAGCATAAAAAAGATGCTTAAGGGATCACGATGCAGAACAGCGCTTTGAAAGCCTGGTTGGACTCTTCTTACCTCTCTGGCGCAAACCAGAGCTGGATAGAACAGctc                                      >  1:202716/1‑251 (MQ=255)
                                                                                                                                                                                                                     actgtatctaatataagggctttgtccgctccttccCAAGGACTGTTTTTAAGGGTCCCTTCGCGAGCCACTACGTAGACAAGAGCTCGCAAGTGAACCCCGGCACGCACATCACTGTGCGTGGTAGTATCCACGGCGAAGTAAGCATAAAAAAGATGCTTAAGGGATCACGATGCAGAACAGCGCTTTGAAAGCCTGGTTGGACTCTTCTTACCTCTCTGGCGCAAACCAGAGCTGGATAGAACAGctct                                     <  2:158568‑M2/215‑1 (MQ=255)
                                                                                                                                                                                                                     aGAAATGCAGGAAATCTTTAAAAACTGCCCCTGACACTAAGACAGTTTTTAAAGGTTCCTTCGCGAGCCACTACGTAGACAAGAGCTCGCAAGTGAACCCCGGCACGCACATCACTGTGCGTGGTAGTATCCACGGCGAAGTAAGCATAAAAAAGATGCTTAAGGGATCACGATGCAGAACAGCGCTTTGAAAGCCTGGTTGGACTCTTCTTACCTCTCTGGCGCAAACCAGAGCTGGATAGAACAGctct                                     >  1:502492/1‑251 (MQ=255)
                                                                                                                                                                                                                                           aaCTGCCCCTGACACTAAGACAGTTTTTAAAGGTTCCTTCGCGAGCCACTACGTAGACAAGAGCTCGCAAGTGAACCCCGGCACGCACATCACTGTGCGTGGTAGTATCCACGGCGAAGTAAGCATAAAAAAGATGCTTAAGGGATCACGATGCAGAACAGCGCTTTGAAAGCCTGGTTGGACTCTTCTTACCTCTCTGGCGCAAACCAGAGCTGGATAGAACAGCTCTATGAAGACTTCTTAACCGATcc               >  1:425304/1‑251 (MQ=255)
                                                                                                                                                                                                                                            gttcccaccttccCTAAGACAGTTTTTAAAGTTTCCTTCGCGAGCCACTACGTAGACAAGAGCTCGCAAGTGAACCCCGGCACGCACATCACTGTGCGTGGTAGTATCCACGGCGAAGTAAGCATAAAAAAGATGCTTAAGGGATCACGATGCAGAACAGCGCTTTGAAAGCCTGGTTGGACTCTTCTTACCTCTCTGGCGCAAACCAGAGCTGGATAGAACAGCTCTATGAAGACTTCTTAACCGATCCt              <  1:75882‑M2/238‑1 (MQ=255)
                                                                                                                                                                                                                                                     gACACTAAGACAGTTTTTAAAGGTTCCTTCGCGAGCCACTACGTAGACAAGAGCTCGCAAGTGAACCCCGGCACGCACATCACTGTGCGTGGTAGTATCCACGGCGAAGTAAGCATAAAAAAGATGCTTAAGGGATCACGATGCAGAACAGCGCTTTGAAAGCCTGGTTGGACTCTTCTTACCTCTCTGGCGCAAACCAGAGCTGGATAGAACAGCTCTATGAAGACTTCTTAACCGATCCTGACTCGGtt     >  1:4119/1‑251 (MQ=255)
                                                                                                                                                                                                                                                        cCTAAGACAGTTTTTAAAGTTTCCTTCTCTAGCCACTACGTAGACAAGAGCTCGCAAGTGAACCCCGGCACGCACATCACTGTGCGTGGTAGTATCCACGGCGAAGTAAGCATAAAAAAGATGCTTAAGGGATCACGATGCAGAACAGCGCTTTGAAAGCCTGGTTGGACTCTTCTTACCTCTCTGGCGCAAACCAGAGCTGGATAGAACAGCTCTATGAAGACTTCTTAACCGATCCTGACTCGGTTGAc  <  1:396885‑M2/250‑1 (MQ=255)
                                                                                                                                                                                                                                                         |                                                                                                                                                                                                                                                          
GCGTCAGTGTATGTCCGAAGGGGCTGAACCCGACGCGCGCCATCGGCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTCATTACCCGTAGGCCTGATAAGCGCAGCGCATCAGGCGTAACAAAGAAATGCAGGAAATCTTTAAAAACTGCCCCTGACACTAAGACAGTTTTTAAAGGTTCCTTCGCGAGCCACTACGTAGACAAGAGCTCGCAAGTGAACCCCGGCACGCACATCACTGTGCGTGGTAGTATCCACGGCGAAGTAAGCATAAAAAAGATGCTTAAGGGATCACGATGCAGAACAGCGCTTTGAAAGCCTGGTTGGACTCTTCTTACCTCTCTGGCGCAAACCAGAGCTGGATAGAACAGCTCTATGAAGACTTCTTAACCGATCCTGACTCGGTTGAC  >  NC_000913/758323‑758819

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.