New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1165257	38 (0.800)	19 (0.400)	18/486	1.4	35.9%	coding (115/543 nt)	ycfP	PF05728 family protein YcfP
	?	NC_000913	1229152 =	30 (0.630)					coding (338/462 nt)	ycgN	putative metal‑chelating domain‑containing protein YcgN

TCATTTTCGCGACAGGAACTGATGGACTCGGCTCGCTGGAAAGCGATCAGCACCCGTCTGAATCAGTTACATGAACGCTGGCAGGAAGAGAAAGCAGGTCACTAACCCTGGCTTATGTGAGGAAGCGATGATTATCTATTTACACGGTTTTGACTCTAACAGTCCGGGTAACCACGAGAAAGTCTTACAATTGCAGTTTATTGACCCGGATGTACGCTTGATAAGCTACAGTACGCGGCATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1165016‑1165257 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cTACTTACTGGTTCGAAAGCGGCAATGCATGGTGAACGTATCTCTGTGCGTCATATCGCAGTGAAAGAATCAGAAGTGATTGACTGGCAGGATCATATCTTAAATAAACCTGACTGGGCGCAGTGATAAATTTAATAGATGCTGATGGGGGCTTTCTTAATATACGTCTGGATGCTCGCCATTTCGTAGCCCTGTTTTTGAAAGCGCTCTG  >  NC_000913/1229152‑1229361                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TCATTTTCGCGTCAGGAACTGATGTACTCTGCTCGCGTGAATGCGTTCAGCACCCGACTGAATCAGTTACATGAACGCTGGCAGGAAGAGAACGCAGGTCACTATCCCTGCCTTATGTGAGGAAGCGATGATTACCTATTTACACGGTTTTGACTCTAACAGTCCGGGTAACCACGAGAAAGTCTTACAATTGCAGTCTATTGACCCCGATGTACGCGTGATAAGCTCCAGTCCGCGGCATCTACTTACT                                                                                                                                                                                                            <  2:354566/250‑1     TTTCGCGACAGGAACTGATGGACTCGGCTCGCTGGAAAGCGATCAGCACCCGTCTGAATCAGTTACATGAACGCTGGCAGGAAGAGAAAGCAGGTCACTAACCCTGGCTTATGTGAGGAAGCGATGATTATCTATTTACACGGTTTTGACTCTAACAGTCCGGGTAACCACGAGAAAGTCTTACAATTGCAGTTTATTGACCCGGATGTACGCTTGATAAGCTACAGTACGCGGCATCTACTTACTGGTTC                                                                                                                                                                                                       >  1:158718/1‑251        CGCGACAGGAACTGATGGACTCGGCTCGCTGGAAAGTGATCAGCACCCGTCTGAATCAGTTACATGAACGCTGGCAGGAAGAGAAAGCAGGTCACTAACCCTGGCTTATGTGAGGAAGCGATGATTATCTATTTACACGGTTTTGACTCTAACAGTCCGGGTAACCACGAGAAAGTCTTACAATTGCAGTTTATTGACCCGGATGTACGCTTGATAAGCTACAGTACGCGGCATCTACTTACTGGTTCGA                                                                                                                                                                                                     >  2:366269/1‑250           GACAGGAACTGATGGACTCGGCTCGCTGGAAAGCGATCAGCACCCGTCTGAATCAGTTACATGAACGCTGGCAGGAAGAGAAAGCAGGTCACTAACCCTGGCTTATGTGAGGAAGCGATGATTATCTATTTACACGGTTTTGACTCTAACAGTCCGGGTAACCACGAGAAAGTCTTACAATTGCAGTTGATTGACCCGGATGTACGCTTGATAAGCTACAGTACGCGGCATCTACGTACTGGTTCGAAAGC                                                                                                                                                                                                 <  2:328544/251‑1              AGGAACTGATGGACTCGGCTCGCTGGAAAGCGATCAGCACCCGTCTGAATCAGTTACATGAACGCTGGCAGGAAGAGAAAGCAGGTCACTAACCCTGGCTTATGTGAGGAAGCGATGATTATCTATTTACACGGTTTTGACTCTAACAGTCCGGGTAACCACGAGAAAGTCTTACAATTGCAGTTTATTGACCCGGATGTACGCTTGATAAGCTACAGTACGCGGCATCTACTTACTGGTTCGAAAGCGGC                                                                                                                                                                                              <  1:463905/251‑1                  ACTGATGGACTCGGCTCGCTGGAAAACGATCAGCACCCGTCTGAATCAGTTACATGAACGCGGGCAGGAAGAGAAAGCAGGTCACTAACACTGGCTTATGTGAGGAAGCGATGATTATCTATTTACACGGTTTTGACTCTAACAGTCCGGATAACCACGAGAAAGTCTTACAATTGCAGTTTATTGACCCGGATGTACGCTTGATAAGCTACAGTACGCGGCATCTACTTACTGGTTCGAAAGCGGCAATG                                                                                                                                                                                          >  1:235113/1‑251                                          AGCGATCAGCACCCGTCTGAATCAGTTACATGAACGCTGGCAGGAAGAGAAAGCAGGTCACTAACCCTGGCTTATGTGAGGAAGCGATGATTATCTATTTACACGGTTTTGACTCTAACAGTCCGGGTAACCACGAGAAAGTCTTACAATTGCAGTTTATTGACCCGGATGTACGCTTGATAAGCTACAGTACGCGGCATCTACTTACTGGTTCGAAAGCGGCAATGCATGGTGAACGTATCTCTGTGCGT                                                                                                                                                                  >  2:22424/1‑251                                                      CCGTCTGAATCAGTTACATGAACGCTGGCAGGAAGAGAAAGCAGGTCACTAACCCTGGCTTATGTGAGGAAGCGATGATTATCTATTTACACGGTTTTGACTCTAACAGTCCGGGTAACCACGAGAAAGTCTTACAATTGCAGTTTATTGACCCGGATGTACGCTTGATAAGCTACAGTACGCGGCATCTACTTACTGGTTCGAAAGCGGCAATGCATGGTGAACGTATCT                                                                                                                                                                          <  1:290357/231‑1                                                      CCGTCTGAATCAGTTACATGAACGCTGGCAGGAAGAGAAAGCAGGTCACTAACCCTGGCTTATGTGAGGAAGCGATGATTATCTATTTACACGGTTTTGACTCTAACAGTCCGGGTAACCACGAGAAAGTCTTACAATTGCAGTTTATTGACCCGGATGTACGCTTGATAAGCTACAGTACGCGGCATCTACTTACTGGTTCGAAAGCGGCAATGCATGGTGAACGTATCT                                                                                                                                                                          >  2:290357/1‑231                                                                    TACATGATCGCTCGCAGGGCGCGAAAGCAGGTCACTAACCCCGGCTTATGTCAGGAAGCGATGATTATCTATTTACACGGTTTTGACTCTAACAGTCCGGGTAACCACGAGAAAGTCTTACAATTGCAGTTTATTGACCCGGATGTACGCTTGATAAGCTACAGTACGCGGCATCTACTTACTGGTTCGAAAGCGGCAATGAATGGTGACCGTATCGCTGTGCGTCATATCGCAGGGCAAGAATCAGAAGg                                                                                                                                        >  2:252748/1‑250                                                                                                AGGTCACTAACCCTGGCTTATGTGAGGAAGCGATGATTATCTATTTACACGGTTTTGACTCTAACAGTCCGGGTAACCACGAGAAAGTCTTACAATTGCAGTTTATTGACCCTGATGTACGCTTGATAAGCTACAGTACGCGGCATCTACTTACTGGTTCGAAAGCGGCAATGCATGGTGAACGTATCTCTGTGCGTCATATCTCAGTGAAAGAATCAGAAGTGATTGACTGGCAGGATCATATCTTAAAT                                                                                                            <  2:307832/251‑1                                                                                                                        AGGAAGCGATGATTATCTATTTACACGGATTTGACTCTAACAGTCCGGTTAACCACGAGAAAGACTTACAATTGCAGTTTATTGACCCGGATGTACGCTTGATAAGCTACAGTACGAGGCATCTACTTACTGGTTCGAAAGCGGCAATGCATGGTGAACGTATCTCTGTGCGTCATATCGCAGAGAAAGAATCAGACGTGATTGACTGGCAGGATCTTATCTTAAATAAACCTGAATGTGCGCAGTGATA                                                                                     >  1:516679/1‑250                                                                                                                                                  GGTTTTGACTCTAACAGTCCGGGTAACCACGAGAAAGTCTTACAATTGCAGTTTATTGACCCGGATGTACGCTTGATAAGCTACAGTACGCGGCATCTACTTACTGGTTCGAAAGCGGCAATGCATGGTGAACGTATCTCTGTGCGTCATATCGCAGTGAAAGAATCAGAAGTGATTGACTGGCAGGATCATATCTTAAATAAACCTGACTGGGCGCAGTGATAAATTTAATAGATGCTGATGGGGGCTTT                                                          >  1:261602/1‑251                                                                                                                                                         ACTCTAACAGTCCGGGTAACCACGAGAAAGTCTTACAATTGCAGTTTATTGACCCGGATGTACGCTTGATAAGCTACAGTACGCGGCATCTACTTACTGGTTCGAAAGCGGCAATGCATGGTGAACGTATCTCTGTGCGTCATATCGCAGTGAAAGAATCAGAAGTGATTGACTGGCAGGATCATATCTTAAATAAACCTGACTGGGCGCAGTGATAAATTTAATAGATGCTGATGGGGGCTTTCTTAtt                                                    >  1:100290/1‑248                                                                                                                                                                          AACCACGAGAAAGTCTTACAATTGCAGTTTATTGACCCGGATGTACGCTTGATAAGCTACAGTACGCGGCATCTACTTACTGGTTCGAAAGCGGCAATGCATGGTGAACGTATCTCTGTGCGTCATATCGCAGTGAAAGAATCAGAAGTGATTGACTGGCAGGATCATATCTTAAATAAACCTGACTGGGCGCAGTGATAAATTTAATAGATGCTGATGGGGGCTTTCTTAATATACGTCTGGATGCTCGC                                  >  1:238758/1‑251                                                                                                                                                                               CGAGAAAGTCTTACAATTGCAGTTTATTGACCCGGATGTACGCTTGATAAGCTACAGTACGCGGCATCTACTTACTGGTTCGAAAGCGGCAATGCATGGTGAACGTATCTCTGTGCGTCATATCGCAGTGAAAGAATCAGAAGTGATTGACTGGCAGGATCATATCTTAAATAAACCTGACTGGGCGCAGTGATAAATTTAATAGATGCTGATGGGGGCTTTCTTAATATACGTCTGGATGCTCGCCATTT                             <  1:185937/251‑1                                                                                                                                                                                GAGAAAGTCTTACAATTGCAGTTTATTGACCCGGATGTACGCTTGATAAGCTACAGTACGCGGCATCTACTTACTGGTTCGAAAGCGGCAATGCATGGTGAACGTATCTCTGTGCGTCATATCGCAGTGAAAGAATCAGAAGTGATTGACTGGCAGGATCATATCTTAAATAAACCTGACTGGGCGCAGTGATAAATTTAATAGATGCTGATGGGGGCTTTCTTAATATACGTCTGGATGCTCGCCATTTC                            <  1:22424/251‑1                                                                                                                                                                                   aacGTCTTACAATTGCAGTTTATAGACCCGGATGTACGCTTGATAAGCTACAGTACGCGGCATCTACTTACTGGTTCGAAAGCGGCAATGCATGGTGAACGTATCTCTGTGCGTCATATCGCAGTGAAAGAATCAGAAGTGATTGAATGGCAGGATCATATCTTAAATAAACCTGACTGGGCGCAGTGATAAATTTAATAGATGCTGATGGGGGCTTTCTTAATATAAGTCTGGATGCTCGCCATTTCGT                          >  2:331837/4‑250                                                                                                                                                                                                           GACCCGGATGTACGCTTGATAAGCTACAGTACGCGGCATCTACTTACTGGTTCGAAAGCGGCAATGCATGGTGAACGTATCTCTGTGCGTCATATCGCAGTGAAAGAATCAGAAGTGATTGACTGGCAGGATCATATCTTAAATAAACCTGACTGGGCGCAGTGATAAATTTAATAGATGCTGATGGGGTCTTTCTTAATATACGTCTGGATGCTCGCCATTTCGTAGCCCTGTTTTTGAAAGCGCTCTG  <  1:287899/250‑1                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TCATTTTCGCGACAGGAACTGATGGACTCGGCTCGCTGGAAAGCGATCAGCACCCGTCTGAATCAGTTACATGAACGCTGGCAGGAAGAGAAAGCAGGTCACTAACCCTGGCTTATGTGAGGAAGCGATGATTATCTATTTACACGGTTTTGACTCTAACAGTCCGGGTAACCACGAGAAAGTCTTACAATTGCAGTTTATTGACCCGGATGTACGCTTGATAAGCTACAGTACGCGGCATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1165016‑1165257 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cTACTTACTGGTTCGAAAGCGGCAATGCATGGTGAACGTATCTCTGTGCGTCATATCGCAGTGAAAGAATCAGAAGTGATTGACTGGCAGGATCATATCTTAAATAAACCTGACTGGGCGCAGTGATAAATTTAATAGATGCTGATGGGGGCTTTCTTAATATACGTCTGGATGCTCGCCATTTCGTAGCCCTGTTTTTGAAAGCGCTCTG  >  NC_000913/1229152‑1229361

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.