New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	4163082 =	49 (1.030)	6 (0.130)	6/482	3.0	10.9%	coding (189/1101 nt)	trmA	tRNA m(5)U54 methyltransferase
	?	NC_000913	= 4499511	NA (NA)					noncoding (1331/1331 nt)	IS2	repeat region
Rejected: Frequency below/above cutoff threshold.

TGCGCGCGCAGTGCATCGCGCAGGGCCTCCGCTTCCTGACGCCACTCATCATCCAGCTTCTTATGGTATAGCAGGGAAACCACCGCCTGATTACTCAGTGTAGTGAGGTAATCAATCTGGAACAACTTGTGGCGCAGAACGGGATTATTACGCACACCCGCAATCATCGCCGTCATCAACTGGTTGATAAGTTCACTGGCGGCGGGGAAGCTATCCACGCGGATGCGGCTTTTGGTTTGTTGATCGAAAATGATGTGATACAGGTCATCGCCATCGTGCCAGATGCGGAACTCCGCGCGCATCCGGTAATGACTGACCGGCGAGCGAAACACTTCCGGAACCAGGTCAGAAAACGGTGCCATCATACTTTGCAAACGTACCACTTTTTCGGCTAACTGCGCTTCATACTGTTCTGTTGGAAGGTGTTCGGGGGTCATGATGTATCCTGAAAAATTAAAGTACGCGGCGATTGTAGGGATTGCTCATCAGATGTCCA  >  NC_000913/4162834‑4163329                                                                                                                                                                                                                                                         |                                                                                                                                                                                                                                                        ggcgcgcgcAGTGCATCGCGCAGGGCCTCCGCTTCCTGACGCCACGCAGCATCCAGCTTCTTATGGTATAGCAGGGAAACCACCGCCTGATTACTCAGTGTAGTGAGGTAATCAATCTGGAACAACTTGGGGCGCAGAACGGGATTATTACGCACACCCGCAATCATCGCCGTCATCAACTGGTTGATAAGTTCACTGGCGGCGGGGAAGCTATCCACGCGGATGCGGCTTTTGGTTTGTTGATCGAAAat                                                                                                                                                                                                                                                       <  2:331718/250‑1 (MQ=255)  gcgcgcgcAGTGCATCGCGCAGGGCCTCCGCTTCCTGACGCCACTCATCATCCAGCTTCTTATGGTATAGCAGGGAAACCACCGCCTGATTACTCAGTGTAGTGAGGTAATCAATCTGGAACAACTTGTGGCGCAGAACGGGATTATTACGCACACCCGCAATCATCGCCGTCATCAACTGGTTGATAAGTTCACTGGCGGCGGGGAAGCTATCCACGCGGATGCGGCTTTTGGTTTGTTGATCGaaa                                                                                                                                                                                                                                                         <  1:405355/248‑1 (MQ=255)         cAGTGCATCGCGCAGGGCCTCCGCTTCCTGACGCCACTCATCATCCAGCTTCTTATGGTATAGCAGGGAAACCACCGCCTGATTACTCAGTGTAGTGAGGTAATCAATCTGGAACAACTTGTGGCGCAGCACGGGATTATTACGCACACCCGCAATCATCGCCGTCATCAACTGGTTGATAAGTTCACTGGCGGCGGGGAAGCTATCCACGCGGATGCGGCTTTTGGTTTTTTGATCGAAAATGATGGGAt                                                                                                                                                                                                                                               >  2:467546/1‑251 (MQ=255)                   cgcAGGGCCTCCGCTTCCTGAAGCCACTCATCATCCAGCTTCTTATGGTATAGCAGGGAAACCACCGACTGATTGCTCAGTGTAGTGAGGTAATCAATCTGGAACAACTTGTGGCGCAGAACGGGATTAATACGCACACCCACAATCATCGCCCTCATCAACTGGTTGATAAGTTCACTGGCGGCGTGGAAGCTATCCCCGCGGATGCGGTTTTTGGTTTGTTGATCGAAAATGATGTGATACAGATCAta                                                                                                                                                                                                                                     <  2:341331/251‑2 (MQ=255)                             ccGCTTCCTGACGCCACTCATCATCCAGCTTCTTATGGTATAGCAGGGAAACCACCGCCTGATTACTCAGTGTAGTGAGGTAATCAATCTGGAACAACTTGTGGCGCAGAACGGGATTATTACGCACACCCGCAATCATCGCCGTCATCAACTGGTTGATAAGTTCACTGGCGGCGGGGAAGCTATCCACGCGGATGCGGCTTTTGGTTTGTTGATCGAAAATGATGTGATACAGGTCATCGCCATCGTGc                                                                                                                                                                                                                           >  2:148712/1‑251 (MQ=255)                                    cTGACGCCACTCATCATCCAGCTTCTTATGGTATAGCAGGGAAACCACCGCCTGATTACTCAGTGTAGTGAGGTAATCAATCTGGAACAACTTGTGGCGCAGAACGGGATTATTACGCACACCCGCAATCATCGCCGTCATCAACTGGTTGATAAGTTCACTGGCGGCGGGGAAGCTATCCACGCGGATGCGGCTTTTGGTTTGTTGATCGAAAATGATGTGATACAGGTCATCGCCATCGTGCCAGATGc                                                                                                                                                                                                                    >  1:10340/1‑251 (MQ=255)                                      gACGCCACTCATCATCCAGCTTCTTATGGTATAGCAGGGAAACCACCGCCTGATTACTCAGTGTAGTGAGGTAATCAATCTGGAACAACTTGTGGCGCAGAACGGGATTATTACGCACACCCGCAATCATCGCCGTCATCAACTGGTTGATAAGTTCACTGGCGGCGGGGAAGCTATCCACGCGGATGCGGCTTTTGGTTTGTTGATCGAAAATGATGTGATACAGGTCATCGCCATCGTGCCAGATGc                                                                                                                                                                                                                    <  2:264520/249‑1 (MQ=255)                                      gACGCCACTCATCATCCAGCTTCTTATGGTATAGCAGGGAAACCACCGCCTGATTACTCAGTGTAGTGAGGTAATCAATCTGGAACAACTTGTGGCGCAGAACGGGATTATTACGCACACCCGCAATCATCGCCGTCATCAACTGGTTGATAAGTTCACTGGCGGCGGGGAAGCTATCCACGCGGATGCGGCTTTTGGTTTGTTGATCGAAAATGATGTGATACAGGTCATCGCCATCGTGCCAGATGc                                                                                                                                                                                                                    <  1:265275/249‑1 (MQ=255)                                            aCTCATCATCCAGCTTCTTATGGTATAGCAGGGAAACCACCGCCTGATTACTCAGTGTAGTGAGGTAATCAATCTGGAACAACTTGTGGCGCAGAACGGGATTATTACGCACACCCGCAATCATCGCCGTCATCAACTGGTTGATAAGTTCACTGGCGGCGGGGAAGCTATCCACGCGGATGCGGCTTTTGGTTTGTTGATCGAAAATGATGTGATACAGGTCATCGCCATCGTGCCAGATGCGGAACTcc                                                                                                                                                                                                            >  1:235442/1‑251 (MQ=255)                                                     ccAGCTTCTTATGGTATAGCAGGGAAACCACCGCCTGATTACTCAGTGTAGTGAGGTAATCAATCTGGAACAACTTGTGGCGCAGAACGGGATTATTACGCACACCCGCAATCATCGCCGTCATCAACTGGTTGATAAGTTCACTGGCGGCGGGGAAGCTATCCACGCGGATGCGGCTTTTGGTTTGTTGATCGAAAATGATGTGATACAGGTCATCGCCATCGTGCCAGATGCGGAACTCCGCGCGCATc                                                                                                                                                                                                   <  2:374961/251‑1 (MQ=255)                                                              tATGGTATAGCAGGGAAACCACCGCCTGATTACTCAGTGTAGTGAGGTAATCAATCTGGAACAACTTGTGGCGCAGAACGGGATTATTACGCACACCCGCAATCATCGCCGTCATCAACTGGTTGATAAGTTCACTGGCGGCGGGGAAGCTATCCACGCGGATGCGGCTTTTGGTTTGTTGATCGAAAATGATGTGATACAGGTCATCGCCATCGTGCCAGATGCGGAACTCCGCGCGCATCCGGTAAt                                                                                                                                                                                            <  2:395683/249‑1 (MQ=255)                                                              tANGGTATAGCAGGGAAACCACCGCCTGATTACTCAGTGTAGTGAGGTAATCAATCTGGAACAGCTTGTGGCGCAGAACGGGATTATCACGCACCCCCGCAATCATCGCCGTCACCAACTGGTTGATAAGCTCACTGGCGGCGGGGAAGCTATCCCCGCGGATGCGGCATTTTGTTTGTTGATCGAAAATGATGTCATACAGGTTACGGCCATCGTTCCAGATGCGCAACTGCGCGGGCATCCGGTAAtg                                                                                                                                                                                           <  2:436219/250‑1 (MQ=255)                                                                  gTATAGCAGGGAAACCACCGCCTGCTTACTCAGTGTAGTGAGGTAATCACTCTGGAACAACTTGTGGCGCAGAACGGGATTATTACGCACACCCGCAATCATCGCCGTCATCAACTGGTTGATAAGTTCACTGGCGGCGGGGAAGCTATCCACGCGGATGCGGCTTTTGGATTGTTGATCGAAAATGATGTGATACAGGTCATCGCCATCGTGCCAGATGCGGAACTCCGCGCGCATCCGGTAAtgactc                                                                                                                                                                                       >  1:61574/1‑249 (MQ=255)                                                                    ataGCAGGGAAACCACCGCCTGATTACTCAGTGTAGTGAGGTAATCAATCTGGAACAACTTGTGGCGCAGAACGGGATTATTACGCACACCCGCAATCATCGCCGTCATCAACTGGTTGATAAGTTCACTGGCGGCGGGGAAGCTATCCACGCGGATGCGGCTTTTGGTTTGTTGATCGAAAATGATGTGATACAGGTCATCGCCATCGTGCCAGATGCGGAACTCCGCGCGCATCCGGTAATGACTGAcc                                                                                                                                                                                    <  2:432446/251‑1 (MQ=255)                                                                     taGCAGGGAAACCACCGCCTGATTACTCAGTGTAGTGAGGTAATCAATCTGGAACAACTTGTGGCGCAGAACGGGATTATTACGCACACCCGCAATCATCGCCGTCATCAACTGGTTGATAAGTTCACTGGCGGCGGGGAAGCTATCCACGCGGATGCGGCTTTTGGTTTGTTGATCGAAAATGATGTGATACAGGTCATCGCCATCGTGCCAGATGCGGAACTCCGCGCGCATCCGGTAATGACTGACCg                                                                                                                                                                                   >  1:327065/1‑251 (MQ=255)                                                                              aaCCAGCGCCTGATTACTCAGTGTAGTGAGTTAATCAATCTGGAACAACTTGTTGCGCAGAACGGGATTATTACGCACTGCCGCAATCATCGCCGTCATCAACTGTTTGATAAGGTCACTGGCGGCGGGGAAGCTATCCACGCGGATGCGGCTTTTGGTTTGGTGATCGAAAATGTTGTGATACAGGTCATCGCCATCTTGCCAGATGCGGAACTCCGCGCGGATCCGGTAATGACTGACCGGCGAGCGaa                                                                                                                                                                          <  2:478808/251‑1 (MQ=255)                                                                                 caccGCCTGATTACTCAGTGTAGTGAGGTAATCAATCTGGAACAACTTGTGGCGCAGAACGGGATTATTACGCACACCCGCAATCATCGCCGTCATCAACTGGTTGATAAGTTCACTGGCGGCGGGGAAGCTATCCACGCGGATGCGGCTTTTGGTTTGTTGATCGAAAATGATGTGATACAGGTCATCGCCATCGTGCCAGATGCGGAACTCCGCGCGCATCCGGTAATGACTGACCGGCGAGCGAAaca                                                                                                                                                                       <  1:324627/251‑1 (MQ=255)                                                                                  accGCCTGATTACTCAGTGTAGTGAGGTAATCAATCTGGAACAACTTGTGGCGCAGAACGGGATTATTACGCACACCCGCAATCATCGCCGTCATCAACTGGTTGATAAGTTCACTGGCGGCGGGGAAGCTATCCACGCGGATGCGGCTTTTGGTTTGTTGATCGAAAATGATGTGATACAGGTCATCGCCATCGTGCCAGATGCGGAACTCCGCGCGCATCCGGTAATGAATGAACGGCGAGCGAAacac                                                                                                                                                                      >  2:237175/1‑251 (MQ=255)                                                                                         gATTACTCAGTGTAGTGAGGTAATCAATCTGGAACAACTTGTGGCGCAGAACGGGATTATTACGCACACCCGCAATCATCGCCGTCATCAACTGGTTGATAAGTTCACTGGCGGCGGGGAAGCTATCCACGCGGATGCGGCTTTTGGTTTGTTGATCGAAAATGATGTGATACAGGTCATCGCCATCGTGCCAGATGCGGAACTCCGCGCGCATCCGGTAATGACTGACCGGCGAGCGAAACACTTCCGGa                                                                                                                                                               <  2:220672/251‑1 (MQ=255)                                                                                                  gtgtAGTGAGGTAATCAATCTGGAACAACTTGTGGCGCAGAACGGGATTATTACGCTCACCCGCAATCATCGCCGTCATCAACTGGTTGATAAGTTCACTGGCGGCGGGTAAGCTATCCACGCGGATGCGGCTTTTGGTTTGTTGATCGAAAATGATGTGATACAGGTCATCGCCATCGTGCCAGATGCGGAACTCCGCGCGCATCCGGTAATGACTGACCGGCGAGCGAAACCCTTCCGGAACCAGGTCa                                                                                                                                                      <  2:270274/251‑1 (MQ=255)                                                                                                    gtAGTGAGGTAATCAATCTGGAACAAATTGTGGCGCAGAACGGGATTATTACGCACACCCGCAATCATCGCCGTCATCAACTGGTTGATAAGTTCACTGGCGGCGGGGAAGCTATCCACGCGGATGCGGCTTTTGGTTTGTTGATCGAAAATGATGTGATACAGGTCATAGAAATCGTGCCAGATGCGGAAATCCGCGCGCATCCGGTAATGACTGAACGGAGAGCGCAACCCTTACGGAACCAAGTc                                                                                                                                                       >  1:140232/1‑248 (MQ=255)                                                                                                         gAGGTAATCAATCTGGAACAACTTGTGGCGCATAACGGTAGTATTACGCACACCCGCAATCATCGCCGTCATCAACTGGTGGATAAGTTCACTGTCGGCGGGGAAGCTATCCACGCGGATGCGGCTTTTGGTTTGTTGATCGAAAATGATGTGATTCAGGTCATCGCCATCGTGCCAGATGCTGAACTCCGCGCGCATCCTGTAATGGCTGACCTGCTAGCGAACCACTGCCGGAACCGGCTCATAAAAc                                                                                                                                                <  2:202560/250‑1 (MQ=255)                                                                                                          aaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaAATGATGTGATACAGGTCATCGCCATCGTGCCAGATGCGGAACTCCGCGCGCATCCGGTAATGACTGACCGGCGAGCGAAACACTTCCGGAACCAGGTCAGAAAACgg                                                                                                                                              <  2:225338‑M1/108‑1 (MQ=255)                                                                                                              aatcaatcTGGAACAACTTGTGGCGCAGAACGGGATTATTACGCACACCCGCAATCATCGCCGTCATCAACTGGTTGATAAGTTCACTGGCGGCGGGGAAGCTATCCACGCGGATGCGGCTTTTGGTTTGTTGATCGAAAATGATGTGATACAGGTCATCGCCATCGTGCCAGATGCGGAACTCCGCGCGCATCCGGTAATGACTGACCGGCGAGCGAAACACTTCCGGAACCAGGTCAGAAAACGGTGcc                                                                                                                                          <  1:416873/251‑1 (MQ=255)                                                                                                              aatcaatcTGGAACAACTTGTGGCGCAGAACGGGATTATTACGCACACCCGCAATCATCGCCGTCATCAACTGGTTGATAAGTTCACTGGCGGCGGGGAAGCTATCCACGCGGATGCGGCTTTTGGTTTGTTGATCGAAAATGATGTGATACAGGTCATCGCCATCGTGCCAGATGCGGAACTCCGCGCGCATCCGGTAATGACTGACCGGCGAGCGAAACACTTCCGGAACCAGGTCAGAAAACGGTGcc                                                                                                                                          <  1:195562/251‑1 (MQ=255)                                                                                                                 caatcTGGAACAACTTGTGGCGCAGAACGGGATTATTACGCACACCCGCAATCATCGCCGTCATCAACTGGTTGATAAGTTCACTGGCGGCGGGGAAGCTATCCACGCGGATGCGGCTTTTGGTTTGTTGATCGAAAATGATGTGATACAGGTCATCGCCATCGTGCCAGATGCGGAACTCCGCGCGCATCCGGTAATGACTGACCGGCGAGCGAAACACTTCCGGAACCAGGTCAGAAAACGGTGCcat                                                                                                                                        >  2:434276/1‑250 (MQ=255)                                                                                                                   gaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaAATGATGTGACACAGGTCATCGCCATCGTGCCAGATGCGGAACTCCGCGCGCATCCGGTAATGACTGACCGGCGAGCGAAACACTTCCGGAACCAGGTCAGAAAACGGTGCcatcat                                                                                                                                     >  1:121273‑M1/135‑251 (MQ=255)                                                                                                                       ggAACAACTTGTGGCGCAGAACGGGATTATTACGCACACCCGCAATCATCGCCGTCATCAACTGGTTGATAAGTTCACTGGCGGCGGGGAAGCTATCCACGCGGATGCGGCTTTTGGTTTGTTGATCGAAAATGATGTGATACAGGTCATCGCCATCGTGCCAGATGCGGAACTCCGCGCGCATCCGGTAATGACTGACCGGCGATCTAAACACTTCCGGAACCAGGTCAGAAAACGGTGCCATCATa                                                                                                                                    <  1:148712/248‑1 (MQ=255)                                                                                                                       ggAACAACTTGTGGCGCAGAACGGGATTATTACGCACACCCGCAATCATCGCCGTCATCAACTGGTTGATAAGTTCACTGGCGGCGGGGAAGCTATCCACGCGGATGCGGCTTTTGGTTTGTTGATCGAAAATGATGTGATACAGGTCATCGCCATCGTGCCAGATGCGGAACTCCGCGCGCATCCGGTAATGACTGACCGGCGAGCGAAACACTTCCGGAACCAGGTCAGAAAACGGTGCCATCATACtt                                                                                                                                 <  1:467546/251‑1 (MQ=255)                                                                                                                       ggAACAACTTGTGGCGCAGAACGGGATTATTACGCACACCCGCAATCATCGCCGTCATCAACTGGTTGATAAGTTCACTGGCGGCGGGGAAGCTATCCACGCGGATGCGGCTTTTGGTTTGTTGATCGAAAATGATGTGATACAGGTCATCGCCATCGTGCCAGATGCGGAACTCCGCGCGCATCCGGTAATGACTGACCGGCGAGCGAAACACTTCCGGAACCAGGTCAGAAAACGGTGCCATCATACt                                                                                                                                  <  2:235442/250‑1 (MQ=255)                                                                                                                                tgtgGCGCAGAACGGGATTATTACGCACACCCGCAATCATCGCCGTCATCAACTGGTTGATAAGTTCACTGGCGGCGGGGAAGCTATCCACGCGGATGCGGCTTTTGGTTTGTTGATCGAAAATGATGTGATACAGGTCATCGCCATCGTGCCAGATGCGGAACTCCGCGCGCATCCGGTAATGACTGACCGGCGAGCGAAACACTTCCGGAACCAGGTCAGAAAACGGTGCCATCATACTTTGCAAACGt                                                                                                                        >  1:443003/1‑251 (MQ=255)                                                                                                                                   ggCGCAGAACGGGATTATTACGCACACCCGCAATCATCGCCGTCATCAACTGGTTGATAAGTTCACTGGCGGCGGGGAAGCTATCCACGCGGATGCGGCTTTTGGTTTGTTGATCGAAAATGATGTGATACAGGTCATCGCCATCGTGCCAGATGCGGAACTCCGCGCGCATCCGGTAATGACTGACCGGCGAGCGAAACACTTCCGGAACCAGGTCAGAAAACGGTGCCATCATACTTTGCAAACGTAc                                                                                                                      <  2:278011/250‑1 (MQ=255)                                                                                                                                             gggATTATTACGCACACCCGCAATCATCGCCGTCATCAACTGGTTGATAAGTTCACTGGCGGCGGGGAAGCTATCCACGCGGATGCGGCTTTTGGTTTGTTGATCGAAAATGATGTGATACAGGTCATCGCCATCGTGCCAGATGCGGAACTCCGCGCGCATCCGGTAATGACTGACCGGCGAGCGAAACACTTCCGGAACCAGGTCAGAAAACGGTGCCATCATACTTTGCAAACGTACCACTTTTTCgg                                                                                                           >  1:455378/1‑251 (MQ=255)                                                                                                                                                      aCGCACAACCGCAATCATCGCCGTCATCAACTGGTTGATAAGTTCACTGGCGGCGGGGAAGCTATCCACGCGGATGCGGCTTTTGGTTTGTTGATCGAAAATGATGTGATACAGGTCCTCGCCATCGTGCCAGATGCGGAACTCCGCGCGCATCCGGTAATGACTGACCGGCGAGCGAAACACTTCCGGAACCAGGTCAGAAAACGGTGCCATCTTACTTTGCAAACGTACCACTTTTTCGGCTAACTgcg                                                                                                  >  1:362057/1‑251 (MQ=255)                                                                                                                                                       cGCACACACGCAATCATCGCCGTCATCAACTGGTTGATAAGGTCACTGGCGGCGGGGAAGCTATCCACGCGGATGCGGCTTTTGGTTTGTTGATCGAAAATGATGTGATACAGGTCATCGCCATCGTGCCAGATGCGGAACTCCGCGCGCATCCGGTAATGACTGACCGGCGAGCGAAACACTTCCGGAACCAGGTAAGAAAACGGTGCCATCATACTTTGCAAACGTACCACTTTTTCGGCTAACTgcgc                                                                                                 <  1:265120/251‑1 (MQ=255)                                                                                                                                                              ccGCAATCATCGCCGTCATCAACTGGTTGATAAGTTCACTAGCGGCGGGGAAGCCATTCCCCCGGATGCGGCTTTTGGTTTGTTGATCTAAAATGATGTGATACAGGGCATCGCCATCGTGCCAGATGCGGAACTCCGCGCGCATCCGGTAATGACTGACCGGCGAGCGGAACACTTCCGCAACCAGTGCAGAAAAAGGGGACATCCTACTTTTCAAACAGAACACTTTTTCGGCCTACTGCGCtttctac                                                                                          >  2:120686/1‑246 (MQ=255)                                                                                                                                                                            gTCATCAACTGGTTGATAAGTTCACTGGCGGCGGGGAAGCTATCCACGCGGATGCGGCTTTTGGTTTGTTGATCGAAAATGATGTGATACAGGTCATCGCCATCGTGCCAGATGCGGAACTCCGCGCGCATCCGGTAAtgac                                                                                                                                                                                         >  2:145569/1‑142 (MQ=255)                                                                                                                                                                            gTCATCAACTGGTTGATAAGTTCACTGGCGGCGGGGAAGCTATCCACGCGGATGCGGCTTTTGGTTTGTTGATCGAAAATGATGTGATACAGGTCATCGCCATCGTGCCAGATGCGGAACTCCGCGCGCATCCGGTAAtgac                                                                                                                                                                                         <  1:145569/142‑1 (MQ=255)                                                                                                                                                                            gTCATCAACTGGTTGATAAGTTCACTGGCGGCGGGGAAGCTATCCAAGCGGATGAGGCTTTTGGGTTGTTGATCGAAAATGATGTGATACAGGGCATCGCCATCGGGCCAGGTGCGGAACTCCGCGCGCATCCGGGAATGACCGACCGGCGAGCGAAACACTTCCGGAACCCAGTCAGAAAAAGGTGCCATCATACTTTGCAAACGTACAACTTTTTCCGCTAACTGCGCTTCATCTTGTTCTGTTGGa                                                                              >  2:188440/1‑249 (MQ=255)                                                                                                                                                                              catcaACTGGTTGATAAGTTCACTGGCGGCGGGGAAGCTATCCACGCGGATGCGGCTTTTGGTTTGTTGATCGAAAATGATGTGATACAGGTCATCGCCATCGTGCCAGATGCGGAACTCCGCGCGCATCCGGTAATGACTGACCGGCGAGCGAAACACTTCCGGAACCAGGTCAGAAAACGGTGCGATCATACTTTGCAAACGTACCACTTTTTCGGCTAACTGCGCTTCATACTGTTCTGTTGGAAGgt                                                                          <  1:263806/251‑1 (MQ=255)                                                                                                                                                                                 caACTGGTTGATAAGTTCACTGGCGGCGGGGAAGCTATCCACGCGGATGCGGCTTTTGGTTTGTTGATCGAAAATGATGTGATACAGGTCATCGCCATCATGCCAGATGCGGAACTCCGCGCGCATCCGGTAATGACTGACCGGCGAGCGAAACACTTCCGGAACCAGGTCAGAAAACGGTGCCATCATACTTTGCAAACGTACCACTTTTTCGGCTAACTGCGCTTCATACTGTTCTGTTGGAAGGTGtt                                                                       <  2:17328/251‑1 (MQ=255)                                                                                                                                                                                 caACTGGTTGATAAGGTCACTGGCGGCGGGGAAGCTATCCACGCGGATGCGGCTTTTGGTTTGTTGATCGAAAATGATGTGATACAGGTCATCGCCATCGTGCCAGATGCGGAACTCCGCGCGCATCCGGTAATGACTGACCGGCGAGCGAAACACTTCCGGAACCAGGTCAGAAAACGGTGCCATCATACTTTGCAAACGTACCACTTTTTCGGCTAACTGCGCTTCATACTGTTCTGTTGGAAGGTGtt                                                                       <  2:473902/251‑1 (MQ=255)                                                                                                                                                                                    atatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggacatataggggcaaatccaAATGATGTGATACAGGCCATCGCCATCGTGCCAGATGCGGAACTCCGCGCGCATCCGGTAATGACTGACAGGCGAGCGAAACACTTCAGGAACCAGGTCAGAAAACGGTGCCATCATACTTTGCAAACATACCACTTTTTCGGCTATATGCGCTTCATACTGTTCTGTTGGAAGgtgttagg                                                                    <  2:490525‑M1/182‑4 (MQ=255)                                                                                                                                                                                          gcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaAATGATGTGATACAGGTCATCGCCATCGTGCCAGATGCGGAACTCCGCGCGCATCCGGTAATGACTGACCGGCGAGCGAAACACTTCCGGAACCAGGTCAGAAAACGGTGCCATCATACTTTGCAAACGTACCACTTTTTCGGCTAACTGCGCTTCATACTGTTCTGTTGGAAGGTGTTCGTGGGTc                                                               >  2:61653‑M1/64‑250 (MQ=255)                                                                                                                                                                                                    cTGGCGGTGGGGAAGCTAACCACGCGGCTGTGGCTTTTGGTTTGTTGATCGAAAATGATGTGATACAGGTCATCGCCATCGTGCCAGATGCGGAACTCCGCGCGCATCCGGGAATGACTGACCGGCGAGCGAAACACTTCCGGAACCAGGTCAGAAAACGGGGCCATCATACTTTGCAAACGTACCACTTTTTCGGCTCACTGCGCTTCATACTGTTCTGTTGGAAGGTGTTCGGGGGTCATGATGTATcc                                                    >  1:422167/1‑251 (MQ=255)                                                                                                                                                                                                            ggggAAGCTATCCACGCGGATGCGGCTTTTGGTTTGTTGATCGAAAATGATGTGATACAGGTCATCGCCATCGTGCCAGATGCGGAACTCCGCGCGCATCCGGTAATGACTGACCGGCGAGCGAAACACTTCCGGAACCAGGTCAGAAAACGGTGCCATCATACTTTGCAAACGTACCACTTTTTCGGCTAACTGCGCTTCATACTGTTCTGTTGGAAGGTGTTCGGGGGTCATGATGTATCCTGAAAAAt                                            <  1:237175/251‑1 (MQ=255)                                                                                                                                                                                                                      tCCACGCGGATGCGGCTTTTGGTTTGTTGATCGAAAATGATGTGATACAGGTCATCGCCATCGTGCCAGATGCGGAACTCCGCGCGCATCCGGTAATGACTGACCGGCGAGCGAAACACTTCCGGAACCAGGTCAGAAAACGGTGCCATCATACTTTGCAAACGTACCACTTTTTCGGCTAACTGCGCTTCATACTGTTCTGTTGGAAGGTGTTCGGGGGTCATGATGTATCCTGAAAAATTAAAGTAcgc                                  >  1:479505/1‑251 (MQ=255)                                                                                                                                                                                                                         aCGCGGATGCGGCTTTTGGTTTGTTGATCGAAAATGATGTGATACAGGTCATCGCCATCGTGCCAGATGCGGAACTCCGCGCGCATCCGGTAATGACTGACCGGCGAGCGAAACACTTCCGGAACCAGGTCAGAAAACGGTGCCATCATACTTTGCAAACGTACCACTTTTTCGGCTAACTGCGCTTCATACTGTTCTGTTGGAAGGTGTTCGGGGGTCATGATGTATCCTGAAAAATTAAAGTACgcggc                               <  1:434276/251‑1 (MQ=255)                                                                                                                                                                                                                             gatgtctggaaatataggggcaaatccaAATGATGTGATACAGGTCATCGCCATCGTGCCAGATGCGGAACTCCGCGCGCATCCGGTAATTACTGACCGGCGAGCGAAACACTTCCGGAACCAGGTCAGAAAACGGTGCCATCATACTTTGCAAACGTACCACTTTTTCGGCTAACTGCGCTTCATACTGTTCTGTTGGAAGGTGTTCGGGGGTCATGATGTATCCTGAAAAATTAAAGTACGCGGCGAtt                           >  1:225338‑M1/29‑251 (MQ=255)                                                                                                                                                                                                                              gattcGGCTTTTTGTTTGTTGATCGAAAATGATGTGATACAGGTCATCGCCATCGTGCCAGATGCGGAACTCCGCGCGCATCCGGTAATGACTGACCGGCGAGCGAAACACTTCCGGAACCAGGTCAGAAAACGGTGCCATCATACTGTGCAAACGTACCACTTTTTCGGCTAACTGCGCTTCATACTGTTCTGTTGGAAGGTGTTCGGGTGTCATGATGTATCCTGAAAAATTAAAGTACGCTGCGATTg                          <  2:422167/247‑1 (MQ=255)                                                                                                                                                                                                                               aTGCGGCTTTTGGTTTGTTGATCGAAAATGATGTGATACAGGTCATCGCCATCGTGCCAGATGCGGAACTCCGCGCGCATCCGGTAATGACTGACCGGCGAGCGAAACACTTCCGGAACCAGGTCAGAAAACGGTGCCATCATACTTTGCAAACGTACCACTTTTTCGGCTAACTGCGCTTCATACTGTTCTGTTGGAAGGTGTTCGGGGGTCATGATGTATCCTGAAAAATTAAAGTACGCGGCGATTGt                         <  2:370513/251‑1 (MQ=255)                                                                                                                                                                                                                                gtctggaaatataggggcaaatccaAATGATGTGATACAGGTCATCGCCATCGTGCCAGATGCGGAACTCCGCGCGCATCCGGTAATGACTGACCGGCGAGCGAAACACTTCCGGAACCAGGTCAGAAAACGGTGCCATCATACTTTGCAAACGTACCACTTTTTCGGCTAACTGCGCTTCATACTGTTCTGTTGGAAGGTGTTCGGGGGTCATGATGTATCCTGAAAAATTAAAGTACGCGGCGATTGt                         >  1:371909‑M1/26‑250 (MQ=255)                                                                                                                                                                                                                                                  gATCGAAAATGATGTGATACAGGTCATCGCCATCGTGCCAGATGCGGAACTCCGCGCGCATCCGGTAATGACTGACCGGCGAGCGAAACACTTCCGGAACCAGGTCAGAAAACGGTGCCATCATACTTTGCAAACGTACCACTTTTTCGGCTAACTGCGCTTCATACTGTTCTGTTGGAAGGTGTTCGGGGGTCATGATGTATCCTGAAAAATTAAAGTACGCGGCGATTTTAGGGATTGCTCATCAGAt       <  1:132045/250‑1 (MQ=255)                                                                                                                                                                                                                                                   aTCGAAAATGATGTGATACAGGTCATCGCCATCGTGCCAGATGCGGAACTCCGCGCGCATCCGGTAATGACTGACCGGCGAGCGAAACACTTCCGGAACCAGGTCAGAAAACGGTGCCATCATACTTTGCAAACGTACCACTTTTTCGGCTAACTGCGCTTCATACTGTTCTGTTGGAAGGTGTTCGGGGGTCATGATGTATCCTGAAAAATTAAAGTACGCGGCGATTGTAGGGATTGCTCATCAGATGt     <  1:241066/251‑1 (MQ=255)                                                                                                                                                                                                                                                      gAANATGATGTGATACAGGTCATCGCCATCGTGCCAGATGCGGAACTCCGCGCGCATCCGGTAATGACTGACCGGCGAGCGAAACACTTCCGGAACCAGGTCAGAAAACGGTGCCATCATACTTTGCAAACGTACCACTTTTTCGGCTAACTGCGCTTCATACTGTTCTGTTGGAAGGTGTTCGGGGGTCATGATGTATCCTGAAAAATTAAAGTACGCGGCGATTGTAGGGATTGCTCATCAGATGTCCa  <  2:443003/251‑1 (MQ=255)                                                                                                                                                                                                                                                         |                                                                                                                                                                                                                                                        TGCGCGCGCAGTGCATCGCGCAGGGCCTCCGCTTCCTGACGCCACTCATCATCCAGCTTCTTATGGTATAGCAGGGAAACCACCGCCTGATTACTCAGTGTAGTGAGGTAATCAATCTGGAACAACTTGTGGCGCAGAACGGGATTATTACGCACACCCGCAATCATCGCCGTCATCAACTGGTTGATAAGTTCACTGGCGGCGGGGAAGCTATCCACGCGGATGCGGCTTTTGGTTTGTTGATCGAAAATGATGTGATACAGGTCATCGCCATCGTGCCAGATGCGGAACTCCGCGCGCATCCGGTAATGACTGACCGGCGAGCGAAACACTTCCGGAACCAGGTCAGAAAACGGTGCCATCATACTTTGCAAACGTACCACTTTTTCGGCTAACTGCGCTTCATACTGTTCTGTTGGAAGGTGTTCGGGGGTCATGATGTATCCTGAAAAATTAAAGTACGCGGCGATTGTAGGGATTGCTCATCAGATGTCCA  >  NC_000913/4162834‑4163329

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.