| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,097,494 | T→A | intergenic (+665/+71) | ycdU → / ← serX | uncharacterized protein YcdU/tRNA‑Ser |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,097,494 | 0 | T | A | 91.7% | 161.0 / 8.7 | 64 | intergenic (+665/+71) | ycdU/serX | uncharacterized protein YcdU/tRNA‑Ser |
| Reads supporting (aligned to +/- strand): ref base T (5/0); new base A (48/7); total (56/8) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATT‑GACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCG‑CCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAGGGAAATCATGACCTGAGGTCAACAAACTTTTTGAAAAAATCGCGCGTTTATTCAAACTTCAATCAATGTGTGGTTTTAATAAGCGAAATCT > NC_000913/1097212‑1097784 | ggggggggTTGACTCGCTTCGCTCGCACTGCGGGCAGTCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAGTGTACGAAAAAAAAGCCCGTACTTTCGTACGAGCCCTTCTTTAAATATGGCGGTGAGGGAGGGATT‑GACTCCCCTCGCTCGCCCTACGGTCCACCCGCTTACTGCGTTCCCGTTCTATCCCCCTGGCCGTCGACCA‑TTGTGGAACCCCGGTCGGGGCATCTAATccacccattgt > 2:255859/1‑295 (MQ=11)gggggggATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTCCGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATT‑GACTCGCTTCGCTCGCCATGCGGGCAGCCCGTTCACTGCGTTCCCGGTCTGTCCCACTGGCTGTCG‑CAAGTTGTCGAACCCCTGTCGGGGCGTCTCATcccccaagtgt > 2:38295/1‑294 (MQ=11)gggggggATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTCAATATGGCGGTGAGGGGGGGATT‑GACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCG‑CCAGTTGTCGAACCCCGGTCGGGGCATCTCATCCCCCCGgtgt > 1:174386/1‑300 (MQ=17) cccTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATT‑GACTCGCTTCGCTCGCCCTGCGGGNAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCG‑CCAGTTGTCGAACCCCGGTCGGGGCATCTCATCCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCg > 1:652854/1‑300 (MQ=17) ccTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATT‑GACCCACTTCACCCGCCCTGCGGGCAGCCCGCTCCCTGCGTTCCCAGTCTGTCCAACTGGCTGTCA‑CCAACTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATCCGacaaaaacacccgt > 1:445904/1‑293 (MQ=11) gCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATT‑GACTCGCTTCGCTCGCCCTGCGGGCCGCCCGCTCACTGCGTTCCCGGTCTGTCCAACTGGCTGTCG‑ACAGTTGTCGAACCCCGGTCGGGGNGTCTCATCTCCCAGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTTGTAc > 2:680464/1‑300 (MQ=255) cTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCACGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATT‑GACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCCCGGTCTGTCCAACTGGCTGTCG‑ACAGTTGTCGAACCCCGGTCGGGGCTGCTCATCCACACGGTGTGTGCAATATATAAAAAAAAGGCCCGTACTTTCGTATGAgat > 2:174323/1‑298 (MQ=11) gCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATT‑GACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCG‑CCAGTTGTCGAACCCCGGTCGGGGCATCTCATCCACCCGGTGTGTGCAATATACGAAAAAAAAGACCGGACTTTCGTACGAGCTcttctt > 1:201406/1‑300 (MQ=12) gTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATT‑GACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCG‑CCAGTTGTCGAACCCCGGTCGGGGCATCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTa > 1:511/1‑300 (MQ=17) gTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATT‑GACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCG‑CCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTCCATATGGCGGt > 1:881473/1‑300 (MQ=17) gTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATT‑GACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCG‑CCAGTTGTCGAACCCCGGTCGGGGCATCTCATCCCCCAGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTATTTCAATATGGCGGt > 1:752344/1‑300 (MQ=12) gTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTAATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTCGAC‑CACTCCGCTCGCCCCACGAGCCGCCCCCTCACTGCGTTCACACTCCGTCCAGCTGACCACCAACCA‑TTGTCGAACCCCTGTCGGGGTGTCTCATACCCCAGGTGTGTGCAATATCCGACAAAGGCGCCCGCACTTTCGTACGAGCtcttccttccatctggccgt > 2:887171/1‑285 (MQ=2) tGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATT‑GACTCGCCTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGCCG‑ACAGTTGTCGAACCCCGGTCGGGGCATCTCATCCCCCAGGTGTGTGCAATATCCGACAAAAAAACCCATACTTTCGTACGAGCTCTTCCTTAACTATGGCGGTGAGGGGGGAAGTCGAAcccac > 2:887272/1‑298 (MQ=11) ccccGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTCCGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATT‑GACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCG‑CCAGTTGTCGAACCCCGGTCGGGGCATCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCACGTACTTTCGTACGAGATCTTCTTTCAATATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGt > 1:862478/1‑300 (MQ=255) ccccGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATT‑GACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCG‑CCAGTTGTCGAACCCCGGTCGGGGCATCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGt > 1:66729/1‑300 (MQ=37) gggCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTATGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATT‑GACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCG‑CCAGTTGTCGAACCCCGGTCGGGGCATCTCNTCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGtata > 1:674363/1‑300 (MQ=255) gggCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGG‑ATT‑GACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCG‑CCAGTTGTCGAACCCCGGTCGGGGCATCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTCAATATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATac > 1:777950/1‑300 (MQ=255) tctcATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATT‑GACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCG‑CCAGTTGTCGAACCCCGGTCGGGGCATCTCATCCACCCGGTGTGTGCAATCTACGAACAAAACGCCCGTACTTTCGTACGAGCTCTTCTTTCCCTATGGCGGTGAGGGGGGGATTCGACCCCCCGATACGTTGCCGTATacacac > 2:448961/1‑300 (MQ=14) tCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATT‑GACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCG‑CCAGTTGTCGAACCCCGGTCGGGGCATCTCATCCCCCCGGTGTGTGCAATATCCGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACACTTTcc > 1:394392/1‑300 (MQ=255) tCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATT‑GACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCG‑CCAGTTGTCGAACCCCGGTCGGGGCATCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTCGAACCCCCGCTACGTTGCCGTATACACACTTTcc > 1:396090/1‑300 (MQ=255) cccccGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATT‑GACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCG‑CCAGTTGTCGCACCCCGGTCGGGGCATCTCATCCACCCGGTGTGTGCAATATCCGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTACATATGGCGGTGAGGGGGGGATTCGAACCCCCAATCCGTTTCCGTATACACCCTTTCCAg > 2:550404/1‑300 (MQ=14) cccccGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATT‑GACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCG‑CCAGTTGTCGAACCCCGGTCGGGGCATCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACACTTTCCAg > 1:467867/1‑300 (MQ=255) cccccGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATT‑GACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCG‑CCAGTTGTCGAACCCCGGTCGGGGCATCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACACTTTCCAg > 1:919619/1‑300 (MQ=255) ctggtgggtgCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATT‑GACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCG‑CCAGTTGTCGAACCCCGGTCGGGGCATCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCg < 1:338698/298‑1 (MQ=255) gtgtgCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATT‑GACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCG‑CCAGTTGTCGAACCCCGGTCGGGGCATCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTc > 1:884748/1‑300 (MQ=255) gtgtgCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATT‑GACTCGCCTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCG‑CCAGTTGTCGAACCCCGGTCGGGGCATCTCATCCCCCCGGTGTGTGCAATATACGAACAAAAAACCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTCGCACCCCCGATACGTTGCCGTATACACACTCTCCAAGCGTgatc > 1:705293/1‑297 (MQ=14) gtgtgCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAAGGGGGGATT‑GACCCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCG‑CCAGTTGTCGAACCCCGGTCGGGGCATCTCATCCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCATACTTTCTTACCAACCTTTCTTTCAATGTGGCAGTGAGGGGGGGATTCGAACCCCCCATCCACTGCCACCTACCCACTTTCCAGGGGTGCTc > 2:180373/1‑300 (MQ=11) gtgCAATATACGAAAAAAAAGCCCGTACTTTNGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATT‑GACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTNCAACTGGCTGTCG‑CCAGTTGTCGAACCCCGGTCGGGGCATCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTCAATATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACCCCCTTTCCCGGCGTGCTCCt > 2:663756/1‑300 (MQ=255) tataCGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGTGGGGATT‑GACTCTCTTCGCTCGCCCTGCGGGCATCCCGCTCACTGCGTTCACGTTCTGTCCGATTGGCTGTCG‑CCAGTTGTCGAACCCCGTTCGGGGCATCTCAGCCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGcc < 1:538479/300‑1 (MQ=17) aaaaaaGCCCATACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATT‑GACTCGCTTCGCTCGCCCTTCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCG‑CCAGTTGTCGAACCCCGGTCGGGGCATCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGac < 1:76211/300‑1 (MQ=255) aaaaGCCCGTACTTTTGTACGGGCGCTTCTGTAGGTATGGTGGTGAGTGTTGTATT‑GGCTCGATTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCG‑CCAGTTGTCGAACCCCGTTCGGTGCATCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATACGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTAGACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGacac < 2:127331/300‑1 (MQ=17) aaaaGCCCCTACTTTCGGACAAGCTCTTTGTTAAATAGGTCGGTGAGGGGGGGATT‑GACTCGCTTCGCTCGCCTTACTGGCACCCCTTGCATTGCTTTCACGGTCTGTCTAACTTGTTTTCG‑CCGTTTTTCGACCCCCGTTCGTGGCGTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGacac < 2:42418/300‑1 (MQ=17) ctctTCTTTAAATATGGCGGTGAGGGGGGGATT‑GACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCG‑CCAGTTGTCGAACCCCGGTCGGGGCATCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTCGCCCCCCCAATCCGTCGCCGTATACACACTCTCCAGGCGTGCCCCTTCCGCCACTCTGACCCCTCACCaacttatcgcccctgtc > 1:865732/1‑285 (MQ=14) tcttTAAATATGGCGGTGAGGGGGGGATT‑GACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCG‑CCAGTTGTCGAACCCCGGTCGGGGCATCTCATCCCCCCGGTGTGTGCAATATCCGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCACCAAATTGTCGTTCCTGTCTTGc > 1:826488/1‑300 (MQ=255) tcttTAAATATGGCGGTGAGGGGGGGATT‑GACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCG‑CCAGTTGTCGAACCCCGGTCGGGGCATCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCACCAAATTGTCGTTCCTGTCTTGc > 1:687494/1‑300 (MQ=255) gggggggATT‑GACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCG‑CCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTa > 1:365919/1‑300 (MQ=255) gggggggATT‑GACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCG‑CCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCAGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAACTATGGCGGTGAGGGGGGGATTTGCACCCCCGATACGCTACCGTATCCACACTCTCCAGGCGTTCTCCTTCCGCCACCCGGACACCTCACCACCTTGTCGTTCCTGTCTTGCTGGAACGGtcgcccatttc > 1:589439/1‑293 (MQ=17) gggggggATT‑GACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCG‑CCAGTTGTCGAACCCCGGTCGGGGCATCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTa > 1:487782/1‑300 (MQ=255) ggATT‑GACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCG‑CCAGTTGTCGAACCCCGGTCGGGGCATCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTTTTCTTTAAATATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAGGGaa > 2:335091/1‑300 (MQ=255) gACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCG‑CCAGTTGTCGAACCCCGGTCGGGGCATCTCATCACCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACGCACTTTCCAGGCGTGCTCCTGCAGGCACTCGGACACCTCACAAAATTGTCGTTCATGTCCTGCTGGAATGGGCGCTCATTTAGAGAAATCAt > 2:156298/1‑300 (MQ=18) tgtgacgcgcgcCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCG‑CCAGTTGTCGAACCCCGGTCGGGGCATCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAGGGAAATCATGAcc < 2:440079/291‑1 (MQ=255) cgcttcgctCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCG‑CCAGTTGTCGAACCCCGGTCGGGGCATCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGAGCTAATTTAGGGAAATCATGAcc > 2:259141/1‑300 (MQ=255) cgctcgcCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCG‑CCAGTTGTCGAACCCCGGTCGGGGCATCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAGGGAAATCATGACCTGAgg > 2:710369/1‑300 (MQ=255) cgctcgcCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCG‑CCAGTTGTCGAACCCCGGTCGGGGCATCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGAGGGGGATTCGAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTGATTTAGGGAAATCATGACCGGAgg > 2:79585/1‑300 (MQ=255) ctcgcCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCG‑CCAGTTGTCGAACCCCGTTCGGGGCATCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAGGGAAATCATGACCTGAGGTc < 2:893688/300‑1 (MQ=255) gcCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCG‑CCAGTTGTCGAACCCCGGTCGGGGCATCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAGGGAAATCATGACCTGAGGTcaac > 1:156830/1‑300 (MQ=255) cccTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCG‑CCAGTTGTCGAACCCCGGTCGGGGCATCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGACCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAGGGAAATCATGAACTGAGGTcaaca > 2:18055/1‑300 (MQ=255) cccTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCG‑CCAGTTGTCGAACCCCGGTCGGGACATCTCATCCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTCNAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCACCAAATTGTTGTTCCTGTCTTGCTGGAACGGGCGCTGATTTAGGGAAATCATGACCTGAGGTaaaca > 2:230104/1‑300 (MQ=255) cacTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCG‑CCAGTTGTCGAACCCCGGTCGGGGCATCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAGGGAAATCATGACCTGAGTTcaaca > 1:139783/3‑300 (MQ=255) cAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCG‑CCAGTTGTCGAACCCCGGTCGGGGCATCTAATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAGGGAAATCATGACCTGAGGTCAACAAACTTTTTg > 1:706381/1‑300 (MQ=255) gCGTTCACGGTCTGTCCAACTGGCTGTCG‑CCAGTTGTCGAACCCCGGTCGGGGCATCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAGGGAAATCATGACCTGAGGTCAACAAACTTTTTGAAAAAATcgcgcg > 1:311594/1‑300 (MQ=255) gCGTTCACGGTCTGTCCAACTGGCTGTCG‑CCAGTTGTCGAACCCCGGTCGGGGCATCTAATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCACCAAATTGTCGTTCCTGTCTTGCTGGCACGGGCGCTAATTCAGGGAAATCATGACCTGAAGTCAACAAACTTTTTGAACACATcgcgcg > 2:377764/1‑300 (MQ=255) gTTCACGGTCTGTCCAACTGGCTGTCG‑CCAGTTGTCGAACCCCGGTCGGGGCATCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTCATTTAGGGAAATCATGACCTGAGGTCAACAAACTTTTTGAAAAAATCGCGCGtt > 2:458518/1‑300 (MQ=255) cGGTCTGTCCAACTGGCTGTCG‑CCAGTTGTCGAACCCCGGTCGGGGCATCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCAGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATCTNGGGAAATCATGACCTGAGGTCAACAAACTTTTTGAAAAAATCTCGCGNTTATTc > 2:744716/1‑300 (MQ=255) ggTCTGTCCAACTGGCTGTCG‑CCAGTTGTCGAACCCCGGTCGGGGCATCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTNAGGGGGGGATTCGAACCCCCGATACGNTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTAACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAGGGAAAGCATGACCTGAGGTCAACAAACTTTTTGAAAAAATCGCGCGTTTATTCa > 2:596235/1‑300 (MQ=255) cTGTCCAACTGGCTGTCG‑CCAGTTGTCGAACCCCGGTCGGGGCATCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAGGGAAATCATGACCTGAGGTCAACAAACTTTTTGAAAAAATCGCGCGTTTATTCAAAc > 1:174719/1‑300 (MQ=255) gTCCAACTGGCTGTCG‑CCAGTTGTCGAACCCCGGTCGGGGCATCTCATCCCCCCGGTGTGTGCAATATACGAAACAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTCTACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGNCACCTCACCAAATTGTCGTTCCTGTCTTGCTGGAAAGGGCGCTAATTTAGGGAAGTCATGAACTGAGGTCAACAGACTTTTTGAAAAAATCGCGCGTTTATTCAAACtt > 1:641235/1‑300 (MQ=255) gTCCAACTGGCTGTCG‑CCAGTTGTCGAACCCCGGTCGGGGCATCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTATGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAGGGAAATCATGACCTGAGGTCAACAAACTTTTTGAAAAAATCGCGCGTTTATTCAAACtt > 1:114126/1‑300 (MQ=255) gTCCAACTGGCTGTCG‑CCAGTTGTCGAACCCCGGTCGGGGCATCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGNCACCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAGGGAAATCATGACCTGAGGTCAACAAACTTTTTGAAAAAATCGCGCGTTTATTCAAACtt > 1:641217/1‑300 (MQ=255) gTCCAACTGGCTGTCG‑CCAGTTGTCGAACCCCGGTCGGGGCATCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAGGGAAATCATGACCTGAGGTCAACAAACTTTTTGAAAAAATCGCGCGTTTATTCAAACtt > 1:545298/1‑300 (MQ=255) cAGTTGTCGAACCCCGGTCGGGGCATCTCATCCCCCCGGTGTGTGCAATATACGCAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAGGGAAATCATGACCTGAGGTCAACAAACTTTTTGAAAAAATCGCGCGTTTATTCAAACTTCAATCAATGTGTGGttt < 2:859221/300‑1 (MQ=255) gTCGAACCCCGGTCGGGGCATCTAATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTCCGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATCCACACTTTCCAGGCGTGCTCCTTCCGCCACTCGGACACCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAGGGAAATCATGACCTGAGGTCAACAAACTTTTTGAAAAAATCGCGCGTTTATTCAAACTTCAATCAATGTGTGGTTTtaata > 1:284316/1‑300 (MQ=255) ggTCGGGGCATCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAGGGCAATCATGACCTGAGGTCAACAAACTTTTTGAAAAAATCGCGCGTTTATTCAAACTTCAATCAATGTGTGGTTTTAATAAGCGAAATCt > 1:843160/1‑300 (MQ=255) ggTCGGGGCATCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTATTTAAATATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAGGGAAATCATGACCTGAGGTCAACAAACTTTTTGAAAAAATCGCGCGTTTATTCAAACTTCAATCAATGTGTGGTTTTAATAAGCGAAATCt > 1:179030/1‑300 (MQ=255) | GGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATT‑GACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCG‑CCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAGGGAAATCATGACCTGAGGTCAACAAACTTTTTGAAAAAATCGCGCGTTTATTCAAACTTCAATCAATGTGTGGTTTTAATAAGCGAAATCT > NC_000913/1097212‑1097784 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |