| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 271761 | NA (NA) | 14 (0.140) | 14/596 | 5.6 | 13.6% | noncoding (1221/1221 nt) | IS30 | repeat region |
| ? | NC_000913 | = 1034135 | 89 (0.870) | coding (882/1794 nt) | hyaB | hydrogenase 1 large subunit | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
ATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAa‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/271591‑271761‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AGTGCCGATTTCGCTCCACGGTTTGTTGAACTGACCGATGGCTAAGGCGTCGGGGATCATCACGTTGTTAATGAAGTCCGCCGTGCGGGTGATAATTGACTGCACCAGGTTCAGGCGTTCCATATTGACTGCCCCGACCGCGCCGCTTTCGTCAATGTTGATGGCGCAAGGCATCCCGCCGACAATCCAGTTTGGATGCGGGTTTTTACCGCCAAAGACCGCGTGGATTTTGACAATTTCACGCTGGAAATCGAGAGCTTCGAGATAGTGGGCAAAGCCCATCAGGTTAGCTTCTGG < NC_000913/1034135‑1033839 ATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAAGTGCCGATTTCGCTCCACGGTTTGTTGAACTGACCGATGGCTAAGGCGTCGGGGATCATCACGTTGTTAATGAAGTCCGCCGTGCGGGTGATAATTGACTGCACCAGGTTCAGGCGTTCCATATTGAC < 1:553634/300‑1 AGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTANACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAAGTGCCGATTTCGCTCCACGGTTTGTTGAACTGACCGATGGCTAAGGCGTCGGGGATCATCACGTTGTTAATGAAGTCCGCCGTGCGGGTGATAATTGAATGCANCAGGTTCAGGCGTTCCATATTGACTGCCCCGACCGCGCCGCTTTCGTCAATGTT > 2:762343/1‑300 aaAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAAGTGCCGATTTCGCTCCACGGTTTGTTGAACTGACCGATGGCTAAGGCGTCGGGGATCATCACGTTGTTAATGAAGTCCGCCGTGCGGGTGATAATTGACTGCACCAGGTTCAGGCGTTCCATATTGACTGCCCCGACCGCGCCGCTTTCGTCAATGTTGATGGCGCAAGGC < 1:681189/298‑1 GCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGNAAGGGGTGTTGCATTGACAGATTGAATCTACAAGTGCCGATTTCGCTCCACGGTTTGTTGAACTGACCGATGGCTAAGGCGTCGGGGATCATCACGTTGTTAATGAAGTCCGCCGTGCGGGTGATAATTGACTGCACCAGGTTCAGGCGTTCCATATTGACTGCCCCGACCGCGCCGCTTTCGTCAATNTTGATGGCGCAAGGCATCCCGCCGACAATCCAGTTTGGATGCGGGTTTTTACCG > 2:778011/1‑300 GACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAAGTGCCGATTTCGCTCCACGGTTTGTTGAACTGACCGATGGCTAAGGCGTCGGGGATCATCACGTTGTTAATGAAGTCCGCCGTGCGGGTGATAATTGACTGCACCAGGTTCAGGCGTTCCATATTGACTGCCCCGACCGCGCCGCTTTCGTCAATGTTGATGGCGCAAGGCATCCCGCCGACAATCCAGTTTGGATGCGGGTTTTTACCGCCAAAGACCGC > 1:726937/1‑300 AGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAAGTGCCGATTTCGCTCCACGGTTTGTTGAACTGACCGATGGCTAAGGCGTCGGGGATCATCACGTTGTTAATGAAGTCCGCCGTGCGGGTGATAATTGACTGCACCAGGTTCAGGCGTTCCATATTGACTGCCCCGACCGCGCCGCTTTCGTCAATGTTGATGGCGCAAGGCATCCCGCCGACAATCCAGTTTGGATGCGGGTTTTTACCGCCAAAGACCGCGTGGATTTT > 1:512827/1‑300 CCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAAGTGCCGATTTCGCTCCACGGTTTGTTGAACTGACCGATGGCTAAGGCGTCGGGGATCATCACGTTGTTAATGAAGTCCGCCGTGCGGGTGATAATTGACTGCACCAGGTTCAGGCGTTCCATATTGACTGCCCCGACCGCGCCGCTTTCGTCAATGTTGATGGCGCAAGGCATCCCGCCGACAATCCAGTTTGGATGCGGGTTTTTACCGCCAAAGACCGCGTGGATTTTGACAATTTCACGCTGGAAAT > 2:164608/1‑300 GAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAAGTGCCGATTTCGGTCCACGGTTTGTTGAACTGACCGATGGCTAAGGCGTCGGGGATCATCACGTTGTTAATGAAGTCCGCCGTGCGGGTGATAATTGACTGCACCAGGTTCAGGCGTTCCATATTGACTGCCCCGACCGCGCCGCTTTCGTCAATATTGATGGCGCAAGGCATCCCGCCGACAATCCAGTTTGGATGCGGGTTTTTACCGCCAAAGACCGCGTGGATTTTGACAATTTCACGCTGGAAATCGAGAG > 2:525411/1‑300 GAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAAGTGCCGATTTCGCTCCACGGTTTGTTGAACTGACCGATGGCTAAGGCGTCGGGGATCATCACGTTGTTAATGAAGTCCGCCGTGCGGGTGATAATTGACTGCACCAGGTTCAGGCGTTCCATATTGACTGCCCCGACCGCGCCGCTTTCGTCAATGTTGATGGCGCAAGGCATCCCGCCGACAATCCAGTTTGGATGCGGGTTTTTACCGCAAAAGACCGCGTGGATTTTGACAATTTCACGCTGGAAATCGAGAG < 1:545790/300‑1 GGGTGTTGCATTGACAGATTGAATCTACAAGTGCCGATTTCGCTCCACGGTTTGTTGAACTGACCGATGGCTAAGGCGTCGGGGATCATCACGTTGTTAATGAAGTCCGCCGTGCGGGTGATAATTGACTGCACCAGGTTCAGGCGTTCCATATTGACTGCCCCGACCGCGCCGCTTTCGTCAATGTTGATGGCGCAAGGCATCCCGCCGACAATCCAGTTTGGATGCGGGTTTTTACCGCCAAAGACCGCGTGGATTTTGACAATTTCACGCTGGAAATCGAGAGCTTCGAGATAGTGG > 1:711873/1‑300 GTGTTGCATTGACAGATTGAATCTACAAGTGCCGATTTCGCTCCACGGTTTGTTGAACTGACCGATGGCTAAGGCGTCGGGGATCATCACGTTGTTAATGAAGTCCGCCGTGCGGGTGATAATTGACTGCACCAGGTTCAGGCGTTCCATATTGACTGCCCCGACCGCGCCGCTTTCGTCAATGTTGATGGCGCAAGGCATCCCTCCGACAATCCAGTTTGGATGCGGGTTTTTACCGCCAAAGACCGCGTGGATTTTGACAATTTCACGCTGGAAATCGAGAGCTTCGAGATAGTGGGC > 1:404220/1‑300 GCATTGACAGATTGAATCTACAAGTGCCGATTTCGCTCCACGGTTTGTTGAACTGACCGATGGCTAAGGCGTCGGGGATCATCACGTTGTTAATGAAGTCCGCCGTGCGGGTGATAATTGACTGCACCAGGTTCAGGCGTTCCATATTGACTGCCCCGACCGCGCCGCTTTCGTCAATGTTGATGGCGCAAGGCATCCCGCCGACAATCCAGTTTGGATGCGGGTTTTTACCGCCAAAGACCGCGTGGATTTTGACAATTTCACGCTGGAAATCGAGAGCTTCGAGATAGTGGGCAAAGC > 2:474712/1‑300 ATCTACAAGTGCCGATTTCGCTCCACGGTTTGTTGAACTGACCGATGGCTAAGGCGTCGGGGATCATCACGTTGTTAATGAAGTCCGCCGTGCGGGTGATAATTGACTGCACCAGGTTCAGGCGTTCCATATTGACTGCCCCGACCGCGCCGCTTTCGTCAATGTTGATGGCGCAAGGCATCCCGCCGACAATCCAGTTTGGATGCGGGTTTTTACCGCCAAAGACCGCGTGGATTTTGACAATTTCACGCTGGAAATCGAGAGCTTCGAGATAGTGGGCAAAGCCCATCAGGTTAGCTT > 1:475752/1‑300 ACAAGTGCCGATTTCGCTCCACGGTTTGTTGAACTGACCGATGGCTAAGGCGTCGGGGATCATCACGTTGTTAATGAAGTCCGCCGTGCGGGTGATAATTGACTGCACCAGGTTCAGGCGTTCCATATTGACTGCCCCGACCGCGCCGCTTTCGTCAATGTTGATGGCGCAAGGCATCCCGCCGACAATCCAGTTTGGATGCGGGTTTTTACCGCCAAAGACCGCGTGGATTTTGACAATTTCACGCTGGAAATCGAGAGCTTCGAGATAGTGGGCAAAGCCCATCAGGTTAGCTTCTGG < 1:480304/300‑1 ATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAa‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/271591‑271761‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AGTGCCGATTTCGCTCCACGGTTTGTTGAACTGACCGATGGCTAAGGCGTCGGGGATCATCACGTTGTTAATGAAGTCCGCCGTGCGGGTGATAATTGACTGCACCAGGTTCAGGCGTTCCATATTGACTGCCCCGACCGCGCCGCTTTCGTCAATGTTGATGGCGCAAGGCATCCCGCCGACAATCCAGTTTGGATGCGGGTTTTTACCGCCAAAGACCGCGTGGATTTTGACAATTTCACGCTGGAAATCGAGAGCTTCGAGATAGTGGGCAAAGCCCATCAGGTTAGCTTCTGG < NC_000913/1034135‑1033839 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |