| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,269,591 | G→A | intergenic (+202/+112) | rdlA → / ← ldrB | putative antisense regulatory RNA RdlA/small toxic polypeptide LdrB |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,269,591 | 0 | G | A | 97.4% | 111.6 / NA | 39 | intergenic (+202/+112) | rdlA/ldrB | putative antisense regulatory RNA RdlA/small toxic polypeptide LdrB |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base A (23/15); minor base C (1/0); total (24/15) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGCCCCCGTTCTGTTGTCAGGTTGTACCTCTCAACGTGCGGGGGTTTTCTCTTTCCAGCAACCAATGCCACCAGGGATAAAGCCCCCGCAACATTGCGCCTCACCGGATAACGCCGGCTTGGTGTGGATACTACGACTCAATTCATCTTCACTTCATCCC‑TGAAATGTTTGCAATGAAGAGTGCATTCCGGTTTTTCAACAGCTGTTACAGTCATTTCATGAGTGCTCTGGATGAGGCTTCCAGCTCGGGTTGCCAATATTTACTTGTGGAAGTGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTG‑ACGCCCGTTTTCACCTTACTTCCGGTTACGCCACCAGCCGACAATCGCTGCGGTAATAATTCCCGCCAGGATCGGTGCCGCCAGGTCGTGCCAGAAAGTCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAAGTGTCTGGTTTCAAGATTAGC > NC_000913/1269304‑1269876 | ttGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGCCCCCGTTCTGTTGTCAGGTTGTACCTCGCAACGTGCGGGGGTTTTCTCTTTCCAGCAACCAATGCCACCAGGGATAAAGCCCCCGCAACATTGCGCCTCACCGGATAACGCCGGCTTGGTGTGGATACTACGACTCAATTCATCTTCACTTCATCCC‑TGAAATGTTTGCAATGAAGAGTGCATTCCGGTTTTTCAACAGCTGTTACAGTCATTTCATGAGTGCTCTGGATGAGGCTTCCAGCTCGGGTTACCAATATTTACt < 1:138660/300‑1 (MQ=255) gCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGCCCCCGTTCTGTTGTCAGGTTGTACCTCTCAACGTGCGGGGGTTTTCTCTTTCCAGCAACCAATGCCACCAGGGATAAAGCCCCCGCAACATTGCGCCTCACCGGATAACGCCGGCTTGGTGTGGATACTACGACTCAATTCATCTTCACTTCATCCC‑TGAAATGTTTGCAATGAAGAGTGCATTCCGGTTTTTCAACAGCTGTTACAGTCATTTCATGAGTGCTCTGGATGAGGCTTCCAGCTCGGGTTACCAATATTTACTtg < 1:136377/300‑1 (MQ=255) ggCTATTCTTGAATTGTTCTGGTTCAAGATTAGCCCCCGTTCTGTTGTCAGGTTGTACCTCTCAACGTGCGGGGGTTTTCTCTTTCCAGCAACCAATGCCACCAGGGATAAAGCCCCCGCAACATTGCGCCTCACCGGATAACGCCGGCTTGGTGTGGATACTACGACTCAATTCATCTTCACTTCATCCC‑TGAAATGTTTGCAATGAAGAGTGCATTCCGGTTTTTCAACAGCTGTTACAGTCATTTCATGAGTTCTCTGGATGAGGCTTCCAGCTCGGGTTACCAATATTTACTtgtg < 2:311279/300‑1 (MQ=255) aTTCTTGAATTGTTCTGGTTCAAGATTAGCCCCCGTTCTGTTGTCAGGTTGTACCTCTCAACGTGCGGGGGTTTTCTCTTTCCAGCAACCAATGCCACCAGGGATAAAGCCCCCGCAACATTGCGCCTCACCGGATAACGCCGGCTTGGTGTGGATACTACGACTCAATTCATCTTCACTTCATCCC‑TGAAATGTTTGCAATGAAGAGTGCATTCCGGTTTTTCAACAGCTGTTACAGTCATTTCATGAGTGCTCTGGATGAGGCTTCCAGCTCGGGTTACCAATATTTACTTGTGGAAg < 1:430130/300‑1 (MQ=255) aTTGTTCTGGTTCAAGATTAGCCCCCGTTCTGTTGTCAGGTTGTACCTCTCAACGTGCGGGGGTTTTCTCTTTCCAGCAACCAATGCCACCAGGGATAAAGCCCCCGCAACATTGCGCCTCACCGGATAACGCCGGCTTGGTGTGGATACTACGACTCAATTCATCTTCACTTCATCCC‑TGAAATGTTTGCAATGAAGAGTGCATTCCGGTTTTTCAACAGCTGTTACAGTCATTTCATGAGTGCTCTGGATGAGGCTTCCAGCTCGGGTTACCAATATTTACTTGTGGAAGTGATAAAg < 2:42091/300‑1 (MQ=255) tGTTCTGGTTCAAGATTAGCCCCCGTTCTGTTGTCAGGTTGTACCTCTCAACGTGCGGGGGTTTTCTCTTTCCAGCAACCAATGCCACCAGGGATAAAGCCCCCGCAACATTGCGCCTCACCGGATAACGCCGGCTTGGTGTGGATACTACGACTCAATTCATCTTCACTTCATCCC‑TGAAATGTTTGCAATGAAGAGTGCATTCCGGTTTTTCAACAGCTGTTACAGTCATTTCATGAGTGCTCTGGATGAGGCTTCCAGCTCGGGTTACCAATATTTACTTGTGGAAGTGATAAAGAc < 1:74645/300‑1 (MQ=255) aGATTAGCCCCCGTTCTGTTGTCAGGTTGTACCTCTAAACGTGCGGGGGTTTTCTCTTTCCAGCAACCAATGCCACCAGGGATAAAGCCACCTCCACCCCACATCTCCACGCCCAACACAGTCTTATTATGGCTACTAAGACTCAATTCATCTTCACTTAATCCA‑TGAAATGTTTGCAATGAAGAGTGCGTTCCGGTTTTTCAACAGCTGTTACAGTCATTTAATGAGTGCTCTGGATGAGGCTTCCAGCTCGGGTTACCAATATTTACTTGTGGAAGTGATAAAGACAAAAATGGCCGc > 1:157717/1‑300 (MQ=14) ccGTTCTGTTGTCAGGTTGTACCTCTCAACGTGCGGGGGTTTTCTCTTTCCAGCAACCAATGCCACCAGGGATAAAGCCCCCGCAACATGGCGCCTCACCGGATAACGCCGGCTTGGTGTGGATACTACGACTCAATTCATCTTCACTTCATCCC‑TGAAATGTTTGCAATGAAGAGTGCATTCCGGTTTTTCAACAGCTGTTACAGTCACTTCATGAGTGCTCTGGATGAGGCTTCCAGCTCGGGTTACCAATGTTTACTTGTGGAAGTGATAAAGACAAAAACGGCCGCAGGCTGTTAc < 1:733629/300‑1 (MQ=255) tataagagacagaGGTTGTACCTCTCAACGTGCGGGGGTTTTCTCTTTCCAGCAACCAATGCCACCAGGGATAAAGCCCCCGCAACATTGCGCCTCACCGGATAACGCCGGCTTGGTGTGGATACTACGACTCAATTCATCTTCACTTCATCCC‑TGAAATGTTTGCAATGAAGAGTGCATTCCGGTTTTTCAACAGCTGTTACAGTCATTTCATGAGTGCTCTGGATGAGGCTTCCAGCTCGGGTTACCAATATTTACTTGTGGAAGTGAGAAAGACAAAAATGGCCGCAGGCTGTTAcc < 1:589482/288‑1 (MQ=255) gTTCTGTTGTCAGGTTGTACCTCTCAACGTGCGGGGGTTTTCTCTTTCCAGCAACCAATGCCACCAGGGATAAAGCCCCCGCAACATTGCGCCTCACCGGATAACGCCGGCTTGGTGTGGATACTACGACTCAATTCATCTTCACTTCATCCC‑TGAAATGTTTGCAATTAAGAGTGCATTCCGGTTTTTCAACAGCTGTTACAGTCATTTCATGAGTGCTCTGGATGAGGCTTCCAGCTCGGGTTACCAATATTTACTTGTGGAAGTGATAAAGACAAAAATGGCCGCAGGCTGTTAccc < 1:178573/300‑1 (MQ=255) aGGTTGTACCTCTCAACGTGCGGGGGTTTTCTCTTTCCAGCAACCAATGCCACCAGGGATAAAGCCCCCGCAACATTGCGCCTCACCGGATAACGCCGGCTTGGTGTGGATACTACGACTCAATTCATCTTCACTTCATCCC‑TGAAATGTTTGCAATGAAGAGTGCATTCCGGCTTTTCAACAGCTGTTACAGTCATTTCATGAGTGCTCTGGATGAGGCTTACAGCTCTGGCTAAACACATTTACTTGTTGAAGTGATAAAGACAAAAATGGCCGCAGGCTGTTACCAATGCGGCCGGt > 1:414586/1‑300 (MQ=14) aGGTTGTACCTCTCAACGTGCGGGGGTTTTCTCTTTCCAGCAACCAATGCCACCAGGGATAAAGCCCCCGCAACATTGCGCCTCACCGGATAACGCCGGCTTGGTGTGGATACTACGACTCAATNCATCTTCACTTCATCCC‑TGAAATGTTTGCAATGAAGAGTGCATTCCGGTTTTTCAACAGCTNTTACAGTCATTTCATGAGTGCTCTGGATGAGGCTTCCAGCTCGGGTTACCAATATTTACTTGTGGAAGTGATAAAGACAAAAATGGCCGCAGGCTGTTAccctgtctcttata > 2:577787/1‑289 (MQ=255) aCCTCTCAACGTGCGGGGGTTTTCTCTTTCCAGCAACCAATGCCACCAGGGATAAAGCCCCCGCAACATTGCGCCTCACCGGATAACGCCGGCTTGGTGTGGATACTACGACTCAATTCATCTTCACTTCATCCC‑TTAAATGTTTGCAATGAAGAGTGCATTCCGGTTTTTCAACAGCTGTTACAGTCATTTCATGAGTGCTCTGGATGAGGCTTCCAGCTCGGGTTACCAATATTTACTTGTGGAAGTGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGgc < 1:23205/300‑1 (MQ=255) ttCCAGCAACCAATGCCACCAGGGATAAAGCCCACGCAACATTGCGCCTCACCGGATAACGCCGGCTTGGTGTGGATACTACGACTCAATTCATCTTCACTTCATCCC‑TGAAATGTTTGCAATGAGGAGTGCATTCATGTTTTTCCACAGATGTTCCAGTCATTTCATGAGTGCTCTGGATGAGGCTTCCAGCTCGGGTTAAAAATATTTAATTGTGGAAGTGGTAAAGACAAAGATGGCCGCAGGCTGTTAACCCTGCGGCCGGTTTCGGGCGTATATTGCCATCACGGCAGCATG‑aag > 1:277993/1‑298 (MQ=14) gggATAAAGCCCCCGCAACATTGCGCCTCACCGGATAATGCCGGCTTGGTGTGGATACTACGACTCAATTCATCTTCACTTCATCCC‑TGAAATGTTTGCAATGAAGAGTGCATTCCGGTTTTTCAACAGCTGTTACAGTCATTTCATGAGTGCTCTGGATGAGGCTTCCAGCTCGGGTTACCAATATTTACTTGTGGAAGTGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTG‑ACGCCCGTTTTCACCTTACTTCCg > 1:562565/1‑300 (MQ=255) gggATAAAGCCCCCGCAACATTGCGCCTCACCGGATAACGCCGGCTTGGTGTGGATACTTATACCCCATCCACATTCACT‑CACCCCCTGAACTGTTCTCAATGGAGAGTGCATTCCGGTTTTTCAACAGCTGTTACAGTTATTTAATGAGTGCTCTGGATGAGGCTTCCAGCTCGGGTTACCAATATTTACTTGTGGAAGTGATAAAGACAAAAATGGCCGCAGGCTGTTAACCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGTCTG‑ACGCCCGTTTTCACCTTACTTCCg > 1:60169/1‑300 (MQ=14) ccGCAACATTGCGCCTCACCGGATAACGCCGGCTTGGTGTGGATACTACGACTCAATTCATCTTCACTTCATCCC‑TGAAATGTTTGCAATGAAGAGTACATTCCGGCTTTTCAACAGCTGTTACCGTCTCTTCCCAACCTCTCCGAACACAACCTCCCTCTCTAATTACCAATATTTACTTGTGGAAGTGATAAAGACAAAAATGGCAGAAGGCTGTTACCCATGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTG‑ACGCCCGTTTTCACCTTACTTCCGGTTATGccacca > 1:427324/1‑300 (MQ=11) aCATTGCGCCTCACCGGATAACGCCGGCTTGGTGTGGATACTACGCCTCAATTCATCTTCACTTCATCCC‑TGAAATGTTTGCAATGAAGAGTGCATTCCGGTTTTTCAACAGCTGTTACAGTCATTTCATGAGTGCTCTGGATGAGGCCTCTAATCCGAATTCCGAAGATTCCCGTGCGACAACGATACAGACAACAATCGCCGCATGCCGTTACCCCTGCTACCGGTTTCAGTCGCATATTGCCATCACGGCAGCCTG‑ACGACCGTTTTCACCTTACTTCCGGTTACGCCAACAGcaga > 2:209730/1‑297 (MQ=9) aCATTGCGCCTCACCGGATAACGCCGGCTTGGTGTGGATACTACGACTCAATTCATCTTCCCTTCATCCC‑TGAAATGTTTGCAATGAAGAGTGTATTCCGGTTTTTCAACAGCTGTTACAGTCATTTCATGAGTGCTCTGGATGAGGCTTCCAGCTCGGGTTACCAATATTTACTTGTGGAAGTGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTG‑ACGCCCGTTTTCACCTTACTTCCGGTTACGCCACCAGCCGa > 1:221036/1‑300 (MQ=255) aCATTGCGCCTCACCGGATAACGCCGGCTTGGTGTGGATACTACGACTCAATTCATCTTCACTTCATCCC‑TGAAATGTTTGCAATGAAGAGTGCATTCCGGTTTTTCAACAGCTGTTACAGTCATTTCATGAGTGCTCTGGATGAGGCTTCCAGCTCGGGTTACCAATATTTACTTGTGGAAGTGATAAAAACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTG‑ACGCCCGTTTTCACCTTACTTCCGGTTACGCCACCAGCCGa > 1:127999/1‑300 (MQ=255) ggATAACGCCGGCTTGGTGTGGATACTACGACTCAATTCATCTTCACTTCATCCC‑TGAAATGTTTGCAATGAAGAGTGCATTCCGGTTTTTCAACAGCTGTTACAGTCATTTCATGAGTGCTCTGGATGAGGCTTCCAGCTCGGGTTACCAATATTTACTTGTGGAAGTGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTG‑ACGCCCGTTTTCACCTTACTTCCGGTTACGCCACCAGCCGACAATCGCTGCGGtaa > 1:722791/1‑300 (MQ=255) gATAACGCCGGCTTGGTGTGGATACTACGACTCAATTCATCTTCACTTCATCCC‑TGAAATGTTTGCAATGAAGAGTGCATTCCGGTTTTTCAACAGCTGTTACAGTCATTTCATGAGTGCTCTGGATGAGGCTTCCAGCTCGGGTTACCAATATTTACTTGTGGAAGTGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTG‑ACGCCCGTTTTCACCTTACTTCCGGTTACGCCACCAGCCGACAATCGCTGCGGtaat > 1:563453/1‑300 (MQ=255) gtgGATACTACGACTCAATTCATCTTCACTTCATCCC‑TGAAATGTTTGCAATGAAGAGTGCATTCCGGTTTTTCAACAGCTGTTACAGTCATTTCATGAGTGCTCTGGATGAGGCTTCCAGCTCGGGTTACCAATATTTACTTGTGGAAGTGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTG‑ACGCCCGTTTTCACCTTACTTCCGGTTACGCCACCAGCCGACAATCGCTGCGGTAATAATTCCCGCCAGGATCg > 1:201027/1‑300 (MQ=255) cttcaTCCC‑TGAAATGTTTGCAATGAAGAGTGCATTCCGGTTTTTCAACAGCTGTTACAGTCATTTCATGAGTGCTCTGGATGAGGCTTCCAGCTCGGGTTACCAATATTTACTTGTGGAAGTGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTG‑ACGCCCGTTTTCACCTTACTTCCGGTTACGCCACCAGCCGACAATCGCTGCGGTAATAATTCCCGCCAGGATCGGTGCCGCCAGGTCGTGCCAGAAAGTCAt > 1:537534/1‑300 (MQ=255) caTCCC‑TTAGATGTTTGCAATTAAGAGTGCATTCCGGTTTTTCAACAGCTGTTACAGTCATTTCATGAGTGCTCTGGATTAGGCTTCCAGCTCGGGTTACCAATATTTATTTTTGGAAGTGATAAAGACAAAAATGGCCACATGCTGTTACCCCTTCGGCCGGTTTCGGGCACATATTGCCAGCACGGCAACCTG‑ACGCCCGTTTTCACCGTACTTCCGGTTACGCCACCAGCCGACAATCGCTTCGGTAATAATTCCCGCCAGGATCGGTGCCGCCAGGTCGTGCCAGAAAGTCATGGc < 2:90359/300‑1 (MQ=255) cc‑TGAAATATTTGCAATGAAGAGTGCATTCCGGTTTTTCAACAGCTGTTACAGTCATTTCATGAGTGCTCTGGATGAGGCTTCCAGCTCGGGTTACCAATATTTACTTGTGGAAGTGATAAAGACAAAAATGGCCGCAGGAGGTGACCCCTGCGGCCGGGGGCGGGCACATATGGCCAGCATGGTGGATTG‑ACGTCCGGTTGCACCCTACTGCCGGTTGCGCCACTAGACGACAATCGCTGCGGTAATAATTCCCGCCAGGATCGGTGCCGCCAGGTCGTGCCAGAAAGTCATGGCAAAc < 2:423383/300‑1 (MQ=14) gCAATGAAGAGTGCATTCCGGTTTTTCAACAGCTGTTACAGTCATTTCATGAGTGCTCTGGATGAGGCTTCCAGCTCGGGTTACCAATATTTACTTGTGGAAGTGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTG‑ACGCCCGTTTTCACCTTACTTCCGGTTACGCCACCAGCCGACAATCGCTGCGGTAATAATTCCCGCCAGGATCGGTGCCGCCAGGTCGTGCCAGAAAGTCATGGCAAACTGCGCGAGCGTc > 1:259622/1‑300 (MQ=255) tGAAGAGGGCATTCTGGGGTTGCAACAGCTGTTACAGTCAATTCATGGGTGCTTTGGAGGAGGCTTCCAGCTCGGGTGACTGATGTTTATTTGTGTAAGTGATAAAGACAAAAAGGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTG‑ACGCCCGTTTTCACCTTACTTCCGGTTACGCCACCAGCCGACAATCGCTGCGGTAATAATTCCCGCCAGGATCGGTGCCGCCAGGTCGTGCCAGAAAGTCATGGCAAACTGCGCGAGCGTCatat < 1:313390/300‑1 (MQ=14) gAAGAGTGTATTCCGGTTTTTCAACAGCTGTTACAGTCATTTCATGAGTGCTCTGGATGAGGCTTCCAGCTCGGGTTACCAATATTTACTTGTGGAAGTGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTG‑ACGCCCGTTTTCACCTTACTTCCGGTTACGCCACCAGCCGACAATCGCTGCGGTAATAATTCCCGCCAGGATCGGTGCCGCCAGGTCGTGCCAGAAAGTCATGGCAAACTGCGCGAGCGTCAtata > 2:649721/1‑300 (MQ=255) aaGAGTACATCCCGATTTTTCAACAACTTTCACAGGCACTTCATTATTGCTCCGGACTAGGCTTCCAACTCTTCTTACCAATGTCTACTTGTGTGAGTGATAAAGACAAAAAGGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTG‑ACGCCCGTTTTCACCTTACTTCCGGTTACGCCACCAGCCGACAATCGCTGCGGTAATAATTCCCGCCAGGATCGGTGCCGCCAGGTCGTGCCAGAAAGTCATGGCAAACTGCGCGAGCGTCATATAg < 1:212093/300‑1 (MQ=11) gTTTTTCAACAGCTGTTACAGTCATTTCATGAGTGCTCTGGATGAGGCTTCCAGCTCGGGTTACCAATATTTACTTGTGGAAGTGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTG‑ACGCCCGTTTTCACCTTACTTCCGGTTACGCCACCAGCCGACAATCGCTGCGGTAATAATTCCCGCCAGGATCGGTGCCGCCAGGTCGTGCCAGAAAGTCATGGCAAACTGCGAGAGCGTCATATAGCCGCCTTGTTGTaa < 1:552999/300‑1 (MQ=255) gTTACAGTCATTTCATGAGTGCTCTGGATGAGGCTTCCAGCTCGGGTTACCAATATTTACTTGTGGAAGTGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGTCCGGTCTCGGTCGCATATTACCATCGAGGCAGCCTG‑AAGCCCGTTTTCACCTTACTTCCGGTTACGCAACCAGCCGACAATCGCTGCGGTAATAATTCCCGACAGGATCGGTGCCGCCAGGTCGTGCCAGAAAGTCATGGCAAACTGCGCGAGCGTCATATAGCAGCCTTGTTGTAATGACAACATTTTGc > 1:426769/1‑300 (MQ=14) gTTACAGTCATTTCATGAGTGCTCTGGATGAGGCTTCCAGCTCGGGTTACCAATATTTACTTGTGGAAGTGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTG‑ACGCCCGTTTTCACCTTACTTCCGGTTACGCCACCAGCCGACACTTGCCTCAGTAATACTTCCAGACATAATCGGTGCAGCCAGGTCGTGCAAGAAAGTCATGGCAAACTGCGCGAGTGTAATGTAGCCGCAGTGTTGTAATGACAAAATTTTGc > 1:442996/1‑300 (MQ=14) gTCATTTCATGAGTGCTCTGGATGAGGCTTCCAGCTCGGGTTACCAATATTTACTTGTGGAAGTGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTG‑ACGCCCGTTTTCACCTTACTTCCGGTTACGCCACCAGCCGACAATCGCTGCGGTAATAATTCCCGCCAGGATCGGTGCCGCCAGGTCGTGCCAGAAAGTCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTAt > 1:718848/1‑300 (MQ=39) gTGCTCTGGATGAGGCTTCCAGCTCGGGTTACCAATATTTACTTGTGGAAGTGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTG‑ACGCCCGTTTTCACCTTACTTCCGGTTACGCCACCAGCCGACAATCGCTGCGGTAATAATTCCCGCCAGGATCGGTGCCGCCAGGTCGTGCCAGAAAGTCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAAGTGTc > 1:170692/1‑300 (MQ=37) gCTCTGGATGAGGCTTCCAGCTCGGGTTACCAATATTTACTTGTGGAAGTGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTG‑ACGCCCGTTTTCACCTTACTTCCGGTTACGCCACCAGCCGACAATCGCTGCGGTAATAATTCCCGCCAGGATCGGTGCCGCCAGGTCGTGCCAGAAAGTCATGGCAAACTGCGTGAGCGTCATATAGCAGCCTTGTTGTCATGACAACATTTTGCGGCTATTCTTGAAGTGTCTg > 1:206454/1‑300 (MQ=255) gCTCTGGATGAGGCTTCCAGCTCGGGTTACCAATATTTACTTGTGGAAGTGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTG‑ACGCCCGTTTTCACCTTACTTCCGGTTACGCCACCAGCCGACAATCGATGCGGTAACAATTCCCGCAAGGACCGGTGCCGCCAGGTCGTGCCAGAAAGTCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAAGTGTCTg > 1:318478/1‑300 (MQ=255) ctctGGATGAGGCTTCCAGCTCGGGTTACCAATATTTACTTGTGGAAGTGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGTGGCTGGTCTAGGGCGCATATTGCCCTCCCGGCCGCCTCCAC‑CCCATTTTCCCCCTACTTACAGCTATACACCCCGCCAACACTCGCTGCGGTAATAATTCCCGACAGGATCGGTGCCGACAGGTCGTGCCAGAAAGTCATGGCAAACTGCGCGAGCGTCATATAGCCGACTTGTTGTAATGAAAACATTTTGCGGCTATCCTTGAAGTGTCTgg > 2:133854/1‑300 (MQ=2) ttCCAGCTCGGGTTACCAATATTTACTTGTGGAAGTGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTG‑ACGCCCGTTTTCACCTTACTTCCGGTTACGCCACCAGCCGACAATCGCTGCAGTAACAATCCCCACAAGAACCAGCGCCGCAAAGTCGTGCCAGAAAGTCATGGCAAACTGCGCGAGCGTCATATAGCAGCATTGTTGTAATGAAAAAATTTTGCGGATATTCTTGAAGTGTCTGGTTTCAAGATTAGc > 1:694709/1‑300 (MQ=11) | TTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGCCCCCGTTCTGTTGTCAGGTTGTACCTCTCAACGTGCGGGGGTTTTCTCTTTCCAGCAACCAATGCCACCAGGGATAAAGCCCCCGCAACATTGCGCCTCACCGGATAACGCCGGCTTGGTGTGGATACTACGACTCAATTCATCTTCACTTCATCCC‑TGAAATGTTTGCAATGAAGAGTGCATTCCGGTTTTTCAACAGCTGTTACAGTCATTTCATGAGTGCTCTGGATGAGGCTTCCAGCTCGGGTTGCCAATATTTACTTGTGGAAGTGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTG‑ACGCCCGTTTTCACCTTACTTCCGGTTACGCCACCAGCCGACAATCGCTGCGGTAATAATTCCCGCCAGGATCGGTGCCGCCAGGTCGTGCCAGAAAGTCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAAGTGTCTGGTTTCAAGATTAGC > NC_000913/1269304‑1269876 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |