New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	270541 =	NA (NA)	49 (0.460)	34/598	2.1	34.5%	noncoding (1/1221 nt)	IS30	repeat region
	?	NC_000913	= 971729	93 (0.870)					intergenic (+131/‑23)	kdsB/ycbJ	3‑deoxy‑manno‑octulosonate cytidylyltransferase/putative phosphotransferase YcbJ

TGCTCATTTTGGCTGACAAACCAGCTCGTATCTCCTCGCGCTCAGACAGTGTCAGGTGAGCTACAGCCCGCTTACGCTCATGGGGTTTTATGCCGCCAGTATCCCTTAACATAGTGAAGATCGTTCCGGGTTTTGAACCCAGGATATTCGCTATTTCACTGAAGCCTGTTCCGTTCTTCCATAGTTCAAAAACAGAGGCTTTTTCCTCTGCTGTAAATGTTCGTCTCATTCAAAAAACCTCCGCAACCCCATGTTTTCACATAACTGTTGCGTTGACCAATTGAATCTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/270831‑270541 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ACTGCTTTCATAATGAGCGCCAATATAAAAGATGTCACCTGAATGAGATCAATTGTTGAAAAGAAAAATTGAGGAAAATCGTAACGGTACGACACTCCTCCCAAAATTGGCTGAAGTGTCGTGAAGTGAAATTAGCGCATTTCAGCGCGAACGCGCTCAAGATCTTCAGGGGTATCCACACCTGTGCCAGGAACTTCCTGAGCAACAGCAACATGGATTTTTTCGCCGTACCACAGAACACGAAGCTGCTCTAACATTTCGATGTGTTCTAACGGACTTGGCTGCCAGTTGAC  <  NC_000913/971729‑971437                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          TGCTCATTTTGGCTGACAAACCAGCTCGTATCTCCTCGCGCTCAGACAGTGTCAGGTGAGCTACAGCCCGCTTACGCTCATGGGGTTTTATGCCGCCAGTATCCCTTAACATAGTGAAGATCGTTCCGGGTTTTGAACCCAGGATATTCGCTATTTCACTGAAGCCTGTTCCGTTCTTCCATAGTTCAAAAACAGAGGCTTTTTCCTCTGCTGTAAATGTTCGTCTCATTCAAAAAACCTCCGCAACCCCATGTTTTCACATAACTGTTGCGTTGACCAATTGAATCTACAACTGCTTTt                                                                                                                                                                                                                                                                                              >  1:396639/1‑299                   AACCAGCTCGTATCTCCTCGCGCTCAGACAGTGTCAGGTGAGCTACAGCCCGCTTACGCTCATGGGGTTTTATGCCGCCAGTATCCCTTAACATAGTGAAGATCGTTCCGGGTTTTGAACCCAGGATATTCGCTATTTCACTGAAGCCTGTTCCGTTCTTCCATAGTTCAAAAACAGAGGCTTTTTCCTCTGCTGTAAATGTTCGTCTCATTCAAAAAACCTCCGCAACCCCATGTTTTCACATANCTGTTGCGTTGACCAATTGAATCTACAACTGCTTTCATCATGAGCGCNAATATA                                                                                                                                                                                                                                                                            >  2:703552/1‑300                    ACCAGCTCGTATCTCCTCGCGCTCAGACAGTGTCAGGTGAGCTACAGCCCGCTTACGCTCATGGGGTTTTATGCCGCCAGTATCCCTTAACATAGTGAAGATCGTTCCGGGTTTTGAACCCAGGATATTCGCTATTTCACTGAAGCCTGTTCCGTTCTTCCATAGTTCAAAAACAGAGGCTTTTTCCTCTGCTGTAAATGTTCGTCTCATTCAAAAAACCTCCGCAACCCCATGTTTTCACATAACTGTTGCGTTGACCAATTGAATCTACAACTtcctgttttagatactatgttgtac                                                                                                                                                                                                                                                                           <  1:20186/300‑26                     CCAGCTCGTATCTCCTCGCGCTCAGACAGTGTCAGGTGAGCTACAGCCCGCTTACGCTCATGGGGTTTTATGCCGCCAGTATCCCTTAACATAGTGAAGATCGTTCCGGGTTTTGAACCCAGGATATTCGCTATTTCACTGAAGCCTGTTCCGTTCTTCCATAGTTCAAAAACAGAGGCTTTTTCCTCTGCTGTAAATGTTCGTCTCATTCAAAAAACCTCCGCAACCCCATGTTTTCACATAACTGTTGCGTTGACCAATTGAATCTACAACTGCcattcttaacccgtgcatctatat                                                                                                                                                                                                                                                                          <  1:120587/300‑25                       AGCTCGTATCTCCTCGCGCTCAGACAGTGTCAGGTGAGCTACAGCCCGCTTACGCTCATGGGGTTTTATGCCGCCAGTATCCCTTAACATAGTGAAGATCGTTCCGGGTTTTGAACCCAGGATATTCGCTATTTCACTGAAGCCTGTTCCGTTCTTCCATAGTTCAAAAACAGAGGCTTTTTCCTCTGCTGTAAATGTTCGTCTCATTCAAAAAACCTCCGCAACCCCATGTTTTCACATAACTGTTGCGTTGACCAATTGAATCTACAACTtcctgttttagatactatgttgtacaag                                                                                                                                                                                                                                                                        >  2:734508/1‑272                                         CTCAGACAGTGTCAGGTGAGCTACAGCCCGCTTACGCTCATGGGGTTTTATGCCGCCAGTATCCCTTAACATAGTGAAGATCGTTCCGGGTTTTGAACCCAGGATATTCGCTATTTCACTGAAGCCTGTTCCGTTCTTCCATAGTTCAAAAACAGAGGCTTTTTCCTCTGCTGTAAATGTTCGTCTAATTCAAAAAACCTCCGCAACCCCATGTTTTCACATAACTGTTGCGTTGACCAATTGAATCTACAACTGCTTTCATAATGAGCGCCAATATAAAAGATGTCACCTGAATGAGAT                                                                                                                                                                                                                                                      >  1:470827/1‑300                                                 GTGTCAGGTGAGCTACAGCCCGCTTACGCTCATGGGGTTTTATGCCGCCAGTATCCCTTAACATAGTGAAGATCGTTCCGGGTTTTGAACCCAGGATATTCGCTATTTCACTGAAGCCTGTTCCGTTCTTCCATAGTTCAAAAACAGAGGCTTTTTCCTCTGCTGTAAATGTTCGTCTCATTCAAAAAACCTCCGCAACCCCATGTTTTCACATAACTGTTGCGTTGACCAATTGAATCTACAACTGCTTTCATAATGAGCGCCAATATAAAAGATGTCACCTGAATGAGATCAATTGTT                                                                                                                                                                                                                                              >  2:429325/1‑300                                                 GTGTCAGGTGAGCTACAGCCCGCTTACGCTCATGGGGTTTTATGCCGCCAGTATCCCTTAACATAGTGAAGATCGTTCCGGGTTTTGAACCCAGGATATTCGCTATTTCACTGAAGCCTGTTCCGTTCTTCCATAGTTCAAAAACAGAGGCTTTTTCCTCTGCTGTAAATGTTCGTCTCATTCAAAAAACCTCCGCAACCCCATGTTTTCACATAACTGTTGCGTTGACCAATTGAATCTACAACTGCTTTCATAATGAGCGCCAATATAAAAGATGTCAACTGAATGAGATCAATTGTT                                                                                                                                                                                                                                              >  1:511224/1‑300                                                 GTGTCAGGTGAGCTACAGCCCGCTTACGCTCATGGGGTTTTATGCCGCCAGCATCCATTAACATAGTGAAGATCGTTCCGGGTTTTGAACCCAGGATATTCGCTATTTCAATGAAGCCTGTTCCGTTCTTCCATAGTTCAAAAACAGAGGCTTTTTCCTCTGCTGTAAATGTTCGTCTCATTCAAAAAACCTCCGCAACCCCATGTTTTCACATAACTGTTGCGTTGACCAATTGAATCTACAACTGCTTTCATAATGAGCGCCAATATAAAAGATGTCACCTGAATGAGATCAATTGTc                                                                                                                                                                                                                                              >  2:32391/1‑299                                                     CAGGTGAGCTACAGCCCGCTTACGCTCATGGGGTTTTATGCCGCCAGTATCCATTAACATAGTGAAGATCGTTCCGGGTTTTGAACCCAGGATATTCGCTATTTCACTGAAGCCTGTTCCGTTCTTCAATAGTTCAAAAACAGAGGCTTTTCCCTATGCTGTAAATGTTCGTCTAATTCAAAAAACCTCCGCAACCCCATGTTTTCAAATAACTGTTGCGTTGACCAATTGAATCTACAACTGCTTTCATAATGAGCGCAAATATAAAAGATGTCAACTGAATGAGATCAATTGTTGAAA                                                                                                                                                                                                                                          >  2:335137/1‑300                                                          gcGCTACAGCCCGCTTACGCTCCTGGGGTTTTATGCCGCCCGTCTCCCTTAACATAGTGACGATCGTTCCGGGTTTTGAACCCAGGATATTCGCTATTTCACTGAAGCCTGTTCCGTTCTTCCATAGTTCAAAAACCGAGGCTTTTTCCTCTGCTGTAAATGTTCGTCTCATTCAAAACACCTCCGCAACCCCATGTTTTCACATAACTGTTGCGTTGACCAATTGAATCTACAACTGCTTTCATAATGCGCGCCAATCTAAAAGATGTCACATGAATGAGATCCATTGTTGAAAAGAca                                                                                                                                                                                                                                     >  1:557073/3‑298                                                            GCTACAGCCCGCTTACGCTCATGGGGTTTTATGCCGCCAGTATCCCTTAACATAGTGAAGATCGTTCCGGGTTTTGAACCCAGGATATTCGCTATTTCACTGAAGCCTGTTCCGTTCTTCCATAGTTCAAAAACAGAGGCTTTTTCCTCTGCTGTAAATGTTCGTCTCATTCAAAAAACCTCCGCAACCCCATGTTTTCACATAACTGTTGCGTTGACCAATTGAATCTACAACTGCTTTCATAATGAGCGCCAATATAAAAGATGTCACCTGAATGAGATCAATTGTTGAAAAGAAAAA                                                                                                                                                                                                                                   >  1:371327/1‑300                                                            GCTACAGCCCGCTTACGCTCATGGGGTTTTATGCCGCCAGTATCCCTTAACATAGTGAAGATCGTTCCGGGTTTTGAACCCAGGATATTCGCTATTTCAATGAAGCCTGTTCCGTTCTTCCATAGTTCAAAAACAGAGGCTTTTTCCTATGCTGTAAATGTTCGTCTCATTCAAAAAACCTCCGCAACCCCATGTTTTCACATAACTGTTGCGTTGACCAATTGAATCTACAACTGCTTTCATAATGAGCGCCAATATAAAAGATGTCACCTGAATGAGATCAATTGTTGAAAAGAAAga                                                                                                                                                                                                                                   >  2:64929/1‑298                                                                                     GTTTTATGCCGCCAGTATCCCTTAACATAGTGAAGATCGTTCCGGGTTTTGAACCCAGGATATTCGCTATTTCACTGAAGCCTGTTCCGTTCTTCCATAGTTCAAAAACAGAGGCTTTTTCCTCTGCTGTAAATGTTCGTCTCATTCAAAAAACCTCCGCAACCCCATGTTTTCACATAACTGTTGCGTTGACCAATTGAATCTACAACTGCTTTCATAATGAGCGCCAATATAAAAGATGTCACCTGAATGAGATCAATTGTTGAAAAGAAAAATTGAGGAAAATCGTAACGGTACGAC                                                                                                                                                                                                          >  1:497764/1‑300                                                                                       TTTATGCCGCCAGTATCCCTTAACATAGTGAAGATCGTTCCGGGTTTTGAACCCAGGATATTCGCTATTTCACTGAAGCCTGTTCCGTTCTTCCATAGTTCAAAAACAGAGGCTTTTTCCTCTGCTGTAAATGTTCGTCTCATTCAAAAAACCTCCGCAACCCCATGTTTTCACATAACTGTTGCGTTGACCAATTGAATCTACAACTGCTTTCATAATGAGCGCCAATATAAAAGATGTCACCTGAATGAGATCAATTGTTGAAAAGAAAAATTGAGGAAAATCGTAACGGTACGACAC                                                                                                                                                                                                        <  1:496096/300‑1                                                                                         TATGCCGCCAGTATCCCTTAACATAGTGAAGATCGTTCCGGGTTTTGAACCCAGGATATTCGCTATTTCACTGAAGCCTGTTCCGTTCTTCCATAGTTCAAAAACAGAGGCTTTTTCCTCTGCTGTAAATGTTCGTCTCATTCAAAAAACCTCCGCAACCCCATGTTTTCACATAACTGTTGCGTTGACCAATTGAATCTACAACTGCTTTCATAATGAGCGCCAATATAAAAGATGTCACCTGAATGAGATCAATTGTTGAAAAGAAAAATTGAGGAAAATCGTAACGGTACGACACTC                                                                                                                                                                                                      <  1:10585/300‑1                                                                                                 CAGTATCCCTTAACATAGTGAAGATCGTTCCGGGTTTTGAACCCAGGATATTCGCTATTTCACTGAAGCCTGTTCCGTTCTTCCATAGTTCAAAAACAGAGGCTTTTTCCTCTGCTGTAAATGTTCGTCTCATTCAAAAAACCTCCGCAACCCCATGTTTTCACATAACTGTTGCGTTGACCAATTGAATCTACAACTGCTTTCATAATGAGCGCCAATATAAAAGATGTCACCTGAATGAGATCAATTGTTGAAAAGAAAAATTGAGGAGAATCGTAACGGTACGACACTCCTCACAAA                                                                                                                                                                                              >  2:90653/1‑300                                                                                                        CCTTAACATAGTGAAGATCGTTCCGGGTTTTNAACCCAGGATATTCGCTATTTCACTGAAGCCTGTTCCGTTCTTCCATAGTTCAAAAACAGAGGCTTTTTCCTCTGCTGTAAATGTTCGTCTANTTCAAAAAACCTCCGCAACCCCATGTTTTCACATAAATGTTGCGTTGACCAATTGAATCTACAACTGCTTTCATAATGAGCGCCAATATAGAAGATGTCACCTGAATGAGATCAATTGTTGAAAAGAAAAATTGAGGAAAATCGTAACGGTACGACACTCCTCCCAAAATTGGCT                                                                                                                                                                                       >  2:599526/1‑300                                                                                                        CCTTAACATAGTGAAGATCGTTCCGGGTTTTGAACCCAGGATATTCGCTATTTCACTGAAGCCTGTTCCGTTCTTCCATAGTTCAAAAACAGAGGCTTTTTCCTCTGCTGTAAATGTTCGTCTCATTCAAAAAACCTCCGCAACCCCATGTTTTCACATAACTGTTGCGTTGACCAATTGAATCTACAACTGCTTTCATAATGAGCGCCAATATAAAAGATGTCACCTGAATGAGATCAATTGTTGAAGAGAAAAATTGAGGAAAATCGTAACGGTACGACACTCCTCCCAAAATTGGCT                                                                                                                                                                                       >  1:87715/1‑300                                                                                                        CCTTAACATAGTGAAGATCGTTCCGGGTTTTGAACCCAGGATATTCGCTATTTCACTGAAGCCTGTTCCGTTCTTCCATAGTTCAAAAACAGAGGCTTTTTCCTCTGCTGTAAATGTTCGTCTCATTCAAAAAACCTCCGCAACCCCATGTTTTCACATAACTGTTGCGTTGACCAATTGAATCTACAACTGCTTTCATAATGAGCGCCAATATAAAAGATGTCACCTGAATGAGATCAATTGTTGAAAAGAAAAATTGAGGAAAATCGTAACGGTACGACACTCCTCCCAAAATTGGCT                                                                                                                                                                                       >  1:148936/1‑300                                                                                                                 AGTGAAGATCGTTCCGGGTTTTGAACCCAGGATATTCGCTATTTCACTGAAGCCTGTTCCGTTCTTCCATAGTTCAAAAACAGAGGCTTTTTCCTCTGCTGTAAATGTTCGTCTCATTCAAAAAACCTCCGCAACCCCATGTTTTCACATAACTGTTGCGTTGACCAATTGAATCTACAACTGCTTTCATAATGAGCGCCAATATAAAAGATGTCACCTGAATGAGATCAATTGTTGAAAAGAAAAATTGAGGAAAATCGTAACGGTACGACACTCCTCCCAAAATTGGCTGAAGTGTCG                                                                                                                                                                              >  1:417206/1‑300                                                                                                                 AGTGAAGATCGTTCCGGGTTTTGAACCCAGGATATTCGCTATTTCACTGAAGCCTGTTCCGTTCTTCCATAGTTCAAAAACAGAGGCTTTTTCCTATGCTGTAAATGTTCGTCTCATTCAAAAAACCTACGCAACCCCATGTTTTCACATAACTGTTGCGTTGACCAATTGAATCTACAACTGCTTTCATAATGAGCGCCAATATAAAAGATGTCACATGAATGAGATCAATTGTTGAGAAGAAAAATTGAGGAAAATCGTAACGGTACGAAACTCCTACCAAAATTGGCTGAAGTGTCG                                                                                                                                                                              >  2:262237/1‑300                                                                                                                  GTGAAGATCGTTCCGGGTTTTGAACCCAGGATATTCGCTATTTCACTGAAGCCTGTTCCGTTCTTCCATAGTTCAAAAACAGAGGCTTTTTCCTCTGCTGTAAATGTTCGTCTCATTCAAAAAACCTCCGCAACCCCATGTTTTCACATAACTGTTGCGTTGACCAATTGAATCTACAACTGCTTTCATAATGAGCGCCAATATAAAAGATGTCACCTGAATGAGATCAATTGTTGAAAAGAAAAATTGAGGAAAATCGTAACGGTACGACACTCCTCCCAAAATTGGCTGAAGTGTCGT                                                                                                                                                                             >  1:723343/1‑300                                                                                                                   TGAAGATCGTTCCGGGTTTTGAACCCAGGATATTCGCTATTTCACTGAAGCCTGTTCCGTTCTTCCATAGTTCAAAAACAGAGGCTTTTTCCTCTGCTGTAAATGTTCGTCTCATTCAAAAAACCTCCGCAACCCCATGTTTTCACATAACTGTTGCGTTGACCAATTGAATCTACAACTGCTTTCATAATGAGCGCCAATATAAAAGATGTCACCTGAATGAGATCAATTGTTGAAAAGAAAAATTGAGGAAAATCGTAACGGTACGACACTCCTCCCAAAATTGGCTGAAGTGTCGTG                                                                                                                                                                            <  1:368699/300‑1                                                                                                                                              GGATATTCGCTATTTCACTGAAGCCTGTTCCGTTCTTCCATAGTTCAAAAACAGAGGCTTTTTCCTCTGCTGTAAATGTTCGTCTCATTCAAAAAACCTCCGCAACCCCATGTTTTCACATAACTGTTGCGTTGACCAATTGAATCTACAACTGCTTTCATAATGAGCGCCAATATAAAAGATGTCACCTGAATGAGATCAATTGTTGAAAAGAAAAATTGAGGAAAATCGTAACGGTACGACACTCCTCCCAAAATTGGCTGAAGTGTCGTGAAGTGAAATTAGCGCATTTCAGCGCGA                                                                                                                                                 >  1:716227/1‑300                                                                                                                                                                    GCCTGTTCCGTTCTTCCATAGTTCAAAAACAGAGGCTTTTTCCTCTGCTGTAAATGTTCGTCTCATTCAAAAAACCTCCGCAACCCCATGTTTTCACATAACTGTTGCGTTGACCAATTGAATCTACAACTGCTTTCATAATGAGCGCCAATATAAAAGATGTCACCTGAATGAGATCAATTGTTGAAAAGAAAAATTGAGGAAAATCGTAACGGTACGACACTCCTCCCAAAATTGGCTGAAGTGTCGTGAAGTGAAATTAGCGCATTTCAGCGCGAACGCGCTCAAGATCTTCAGGGG                                                                                                                           <  1:667077/300‑1                                                                                                                                                                         TTCCGTTCTTCCATAGTTCAAAAACAGAGGCTTTTTCCTCTGCTGTAAATGTTCGTCTCATTCAAAAAACCTCCGCAACCCCATGTTTTCACATAACTGTTGCGTTGACCAATTGAATCTACAACTGCTTTCATAATGAGCGCCAATATAAAAGATGTCACCTGAATGAGATCAATTGTTGAAAAGAAAAATTGAGGAAAATCGTAACGGTACGACACTCCTCCCAAAATTGGCTGAAGTGTCGTGAAGTGAAATTAGCGCATTTCAGCGCGAACGCGCTCAAGATCTTCAGGGGTATCC                                                                                                                      <  1:385819/300‑1                                                                                                                                                                             GTTCTTCCATAGTTCAAAAACAGAGGCTTTTTCCTCTGCTGTAAATGTTCGTCTCATTCAAAAAACCTCCGCAACCCCATGTTTTCACATAACTGTTGCGTTGACCAATTGAATCTACAACTGCTTTCATAATGAGCGCAAATATAAAAGATGTCACCTGAATGAGATCAATTGTTGAAAAGAAAAATTGAGGAAAATCGTAACGGTACGACACTCCTCCCAAAATTGGCTGAAGTGTCGTGAAGTGAAATTTACGCATTTCAGTGCGAACGCGCTCAAGGTCCTCAGGGGTATCCCCAC                                                                                                                  >  2:277212/1‑300                                                                                                                                                                                CTTCCATAGTTCAAAAACAGAGGCTTTTTCCTCTGCTGTAAATGTTCGTCTCATTCAAAAAACCTCCGCAACCCCATGTTTTCACATAACTGTTGCGTTGACCAATTGACTCTACCACTGCTTTCATAATGAGCGCCAATATAAAAGATGTCACCTGAATGAGATCAATTGTTGAAAAGAAAAATTGAGAAAAATCGTAACGGTACGACACTCCTCCCAAAATTGGCTGAAGTGTCGTGAAGTGAAACTAGCGCATTTCAGCGCGAACGCGCTCCAGGTCTTCAGGGGTATTCACACCcg                                                                                                               >  2:403481/1‑298                                                                                                                                                                                        GTTCAAAAACAGAGGCTTTTTCCTCTGCTGTNAATGTTCGTCTCATTCAAAAAACCTCCGCAACCCCATGTTTTCACATAACTGTTGCGTTGACCAATTGAATCTACAACTGCTTTCATAATGANCGCCAATATAAAAGATGTCACCTGAATGAGATCAATTGTTGAAAAGAAAAATTGAGGAAAATCGTAACGGTACGACACTCCTCCCAAAATTGGCTGAAGTGTCGTGAAGTGAAATTAGCGCATTTCAGCGCGAACGCGCTCAAGATCTTCAGGGGTATCCACACCTGTGCCAGGA                                                                                                       >  2:612424/1‑300                                                                                                                                                                                        GTTCAAAAACAGAGGCTTTTTCCTATGCTGTAAATGTTCGTCTCATTCAAAAAACCTCCGCAACCCCATGTTTTCACATAACTGTTGCGTTGACCAATTGAATCTACAACTGCTTTCATAATGANCGCCAATATAAAAGATGTCAACTGAANGAGATCAATTGTTGAAAAGAAAAACTGAGGAAAATCGTAACGGTACGACACTCCTCCCAAAATTGGCTGAAGTGTCGTGAAGTGAAATTAGCGCATTTCCGCGTGAACGTGCTCAAGACCTTTAGGGGTCTCCACACCTGTGCCAGGA                                                                                                       >  2:592680/1‑300                                                                                                                                                                                                      GCTTTTTCCTCTGCTGTAAATGTTCGTCTAATTCAAAAAACCTCCGCAACCCCATGTTTTCACATAACTGTTGCGTTGACCAATTGAATCTACAACTGCTTTCATAATGAGCGCCAATATAAAAGATGTCACCTGAATGAGATCAATTGTTGAAAAGAAAAATTGAGGAAAATCGTAACGGTACGACACTCCTCCCAAAATTGGCTGAAGTGTCGTGAAGTGAAATTAGCGCATTTCAGCGCGAACGCGCTCAAGATCTTCAGGGGTATCCACACCTGTGCCAGGAACTTCCTGAGCAAC                                                                                         >  1:457441/1‑300                                                                                                                                                                                                       CTTTTTCCTCTGCTGTAAATGTTCGTCTCATTCAAAAAACCTCCGCAACCCCATGTTTTCACATAACTGTTGCGTTGACCAATTGAATCTACAACTGCTTTCATAATGAGCGCCAATATAAAAGATGTCACCTGAATGAGATCAATTGTTGAAAAGAAAAATTGAGGAAAATCGTAACGGTACGACACTCCTCCCAAAATTGGCTGAAGTGTCGTGAAGTGAAATTAGCGCATTTCAGCGCGAACGCGCTCAAGATCTTCAGGGGTATCCACACCTGTGCCAGGAACTTCCTGAGCAACA                                                                                        >  1:690515/1‑300                                                                                                                                                                                                                  GCTGTAAATGTTCGTCTCATTCAAAAAACCTCCGCAACCCCATGTTTTCACATAACTGTTGCGTTGACCAATTGAATCTACAACTGCTTTCATAATGAGCGCCAATATAAAAGATGTCACCTGAATGAGATCAATTGTTGAAAAGAAAAATTGAGGAAAATCGTAACGGTACGACACTCCTCCCAAAATTGGCTGAAGTGTCGTGAAGTGAAATTAGCGCATTTCAGCGCGAACGCGCTCAAGATCTTCAGGGGTATCCACACCTGTGCCAGGAACTTCCTGAGCAACAGCAAAATGGAT                                                                             >  1:279692/1‑300                                                                                                                                                                                                                                    ATTCAAAAAACCTCCGCAACCCCATGTTTTCACATAACTGTTGCGTTGACCAATTGAATCTACAACTGCTTTCATAATGAGCGCCAATATAAAAGATGTCACCTGAATGAGATCAATTGTTGAAAAGAAAAATTGAGGAAAATCGTAACGGTACGACACTCCTCCCAAAATTGGCTGAAGTGTCGTGAAGNGAAATTAGCGCATTTCAGCGCGAACGCGCTCAAGATCTTCAGGGGTATCCACACCTGTGCCAGGAACTTCCTGAGCAACAGCAACATGGATTTTTTCGCCGTACCACAG                                                           >  1:579603/1‑300                                                                                                                                                                                                                                       CAAAAAACCTCCGCAACCCCATGTTTTCACATAACTGTTGCGTTGACCAATTGAATCTACAACTGCTTTCATAATGAGCGCCAATATAAAAGATGTCACCTGAATGAGANCAATTGTTGAAAAGAAAAATTGAGGAAAATCGTAACGGTACGACACTCCTCCCAAAATTGGCTGAAGTGTCGTGAAGTGAAATTAGCGCATTTCAGCGCGAACGCGCTCAAGATCTTCAGGGGTATCCACACCTGTGCCAGGAACTTCCTGAGCAACAGCAACATGGATTTTTTCGCCGTACCACAGAAC                                                        <  1:598830/300‑1                                                                                                                                                                                                                                              CCTCCGCAACACCATGTTTTCACATAACTGTTGCGTTGACCAATTGAATCTACAACTGCTTTCATAATGAGCGCCAATATAAAAGATGTCACCTGAATGAGATCAATTGTTGAAAAGAAAAATTGAGGAAAATCGTAACGGTACGACACTCCTCCCAAAATTGGCTGAAGTGTCGTGAAGTGAAATTAGCGCATTTCAGCGCGAACGCGCTCAAGATCTTCAGGGGTATCCACACCTGTGCCAGGAACTTCCTGAGCAACAGCAACATGGATTTTTTCGCCGTACCACAGAACACGAAGC                                                 <  1:336167/300‑1                                                                                                                                                                                                                                                      ACCCCATGTTTTCACATAACTGTTGCGTTGACCAATTGAATCTACAACTGCTTTCATAATGAGCGCCAATATAAAAGATGTCACCTGAATGAGATCAATTGTTGAAAAGAAAAATTGAGGAAAATCGTAACGGTACGACACTCCTCCCAAAATTGGCTGAAGTGTCGTGAAGTGAAATTAGCGCATTTCAGCGCGAACGCGCTCAAGATCTTCAGGGGTATCCACACCTGTGCCAGGAACTTCCTGAGCAAAAGCAAAATGGATTTTTTCGCCGTACCACAGAACACGAAGCTGCTCTAA                                         >  1:560182/1‑300                                                                                                                                                                                                                                                        CCCATGTTTTCACATAACTGTTGCGTTGACCAATTGAATCTACAACTGCTTTCATAATGAGCGCCAATATAAAAGATGTCACCTGAATGAGATCAATTGTTGAAAAGAAAAATTGAGGAAAATCGTAACGGTACGACACTCCTCCCAAAATTGGCTGAAGTGTCGTGAAGTGAAATTAGCGCATTTCAGCGCGAACGCGCTCAAGATCTTCAGGGGTATCCACACCTGTGCCAGGAACTTCCTGAGCAACAGCAACATGGATTTTTTCGCCGTACCACAGAACACGAAGCTGCTCTAACA                                       <  1:144669/300‑1                                                                                                                                                                                                                                                             GTTTTCACATAACTGTTGCGTTGACCAATTGAATCTACACCTGCTTTCATAATGAGCGCCAATATAAAAGATGTCACCTGAATGAGATCAATTGTTGAAAAGAAAAATTGAGGAAAATCGTAACGGTACGACACTCCTACCAAAATTGGCTGAAGTGTCGTGAAGTGAAATTAGCGCATTTCAGCGCGAACGCGTTAAAGGTCTTCAGGGGTATCCACACCTGTGCCAGGAACTTCCTGAGCAACAGCAACATGGGTTTTTTCGCAGTACCACAGAACACGAAGCTGCTCTAACATTTag                                  >  2:242384/1‑298                                                                                                                                                                                                                                                                        ACTGTTGCGTTGACCAATTGAATCTACAACTGCTTTCATAATGAGCGCCAATATAAAAGATGTCACCTGAATGAGATCAATTGTTGAAAAGAAAAATTGAGGAAAATCGTAACGGTACGACACTCCTCCCAAAATTGGCTGAAGTGTCGTGAAGTGAAATTAGCGCATTTCAGCGCGAACGCGCTCAAGATCTTCAGGGGTATCCACACCTGTGCCAGGAACTTCCTGAGCAACAGCAACATGGATTTTTTCGCCGTACCACAGAACACGAAGCTGCTCTAACATTTCGATGTGTTCTAA                       >  1:750635/1‑300                                                                                                                                                                                                                                                                         gTGTTGCATTGACAGATTGAATCTACAACTGCTTTCATAATGAGCGCCAATATAAAAGATGTCACCTGAATGAGATCAATTGTTGAAAAGAAAAATTGAGGAAAATCGTAACGGTACGACACTCCTCCCAAAATTGGCTGAAGTGTCGTGAAGTGAAATTAGCGCATTTCAGCGCGAACGCGCTCAAGATCTTCAGGGGTATCCACACCTGTGCCAGGAACTTCCTGAGCAACAGCAACATGGATTTTTTCGCCGTACCACAGAACACGAAGCTGCTCTAACATTTCGATGTGTTCTAAC                      >  1:378304/2‑300                                                                                                                                                                                                                                                                         CTGTTGCGTTGACCAATTGAATCTACAACTGCTTTCATAATGAGCGCCAATATAAAAGATGTCACCTGAATGAGATCAATTGTTGAAAAGAAAAATTGAGGAAAATCGTAACGGTACGACACTCCTCCCAAAATTGGCTGAAGTGTCGTGAAGTGAAATTCGCGCATTTCAGCGCGAACGCGCTCAAGATCTTCAGGGGTATCCACACCTGTGCCAGGAACTTCCTGAGCAACAGCAACATGGATTTTTTCGCCGTACCACAGAACACGAAGCTGCTCTAACATTTCGATGTGTTCTAAa                      >  1:319916/1‑299                                                                                                                                                                                                                                                                          TGTTGCGTTGACCAATTGAATCTACAATTGCTTTCATAAGGGGCGCCAATATAAAAGATTTCACCTGAATGAGATCAATTGTTGAAAAGAAAAATTGAGGAAAATCGTAACGGTACGACACTCCTCCCAAAATTGGCTGAAGTGTCGTGAAGTGAAATTAGCGCATTTCAGCGCGAACGCGCTCAAGATCTTCAGGGGTATCCACACCTGTGCCAGGAACTTCCTGAGCAACAGCAACAGGGATTTTTTCGCCGTACCACAGAACACGAAGCTACTCTAACATTTCGATGTGTTCTAACG                     <  2:305058/300‑1                                                                                                                                                                                                                                                                          TGTTGCGTTGACCAATTGAATCTACAACTGCTTTCATAATGAGCGCCAATATAAAAGATGTCACCTGAATGAGATCAATTGTTGAAAAGAAAAATTGAGGAAAATCGTAACGGTACGACACTCCTCCCAAAATTGGCTGAAGTGTCGTGAAGTGAAATTAGCGCATTTCAGCGCGAACGCGCTCAAGATCTTCAGGGGTATCCACACCTGTGCCAGGAACTTCCTGAGCAACAGCAACATGGATTTTTTCGCCGTACCACAGAACACGAAGCTGCTCTAACATTTCGATGTGTTCTAACG                     <  2:462673/300‑1                                                                                                                                                                                                                                                                          TGTTGCGTTGACCAATTGAATCTACAACTGCTTTCATAATGAGCGCCAATAGAAAAGATGTCACCTGAATGAGATCAATTGGTGAAAAGAAAAATTGAGGAAAATCGTAACGGTACGACACTCCTCCCAAAATTGGCTGAAGTGTCTTGAAGTGAAATTAGCGCATTTCAGCGCGAACGCGCTCAAGATCTTCAGGGGTATCCACACCTGTGCCAGGAACTTCCTGAGCAACAGCAACATGGATTTTTTCGCCGTACCACAGAACACGAAGCTGCTCTAACATTTCGATGTGGTCTAACG                     <  2:45314/300‑1                                                                                                                                                                                                                                                                                   GACCAATTGAATCTACAACTGCTTTCATAATGAGCGCCAATATAAAAGATGTCACCTGAATGAGATCAATTGTTGAAAAGAAAAATTGAGGAAAATCGTAACGGTACGACACTCCTCCCAAAATTGGCTGAAGTGTCGTGAAGTGAAATTAGCGCATTTCAGCGCGAACGCGCTCAAGATCTTCAGGGGTCTCCCCCCCTGTGCCAGGAACCTCCTGAGCAACAACAACATGGATTTTTTCGCCGTACCACAGAACACGAAGCTGCTCTAACATTTCTATGTGTTCTAACGGACTTGGCT            >  1:146874/1‑300                                                                                                                                                                                                                                                                                             ATCTACAACTGCTTTCATAATGAGCGCCAATATAAAAGATGTCACCTGAATGAGATCAATTGTTGAAAAGAAAAATTGAGGAAAATCGTAACGGTACGACACTCCTCCCAAAATTGGCTGAAGTGTCGTGAAGTGAAATTAGCGCATTTCAGCGCGAACGCGCTCAAGATCTTCAGGGGTATCCACACCTGTGCCAGGAACTTCCTGAGCAACAGCAACATGGATTTTTTCGCCGTACCACAGAACACGAAGCTGCTCTAACATTTCGATGTGTTCTAACGGACTTGGCTGCCAGTTGAC  >  1:188510/1‑300                                                                                                                                                                                                                                                                                             ATCTACAACTGCTTTCATAATGAGCGCCAATATAAAAGATGTCACCTGAATGAGATCAATTGTTGAAAAGAAAAATTGAGGAAAATCGTAACGGTACGACACTCCTCCCAAAATTGGCTGAAGTGTCGTGAAGTGAAATTAGCGCATTTCAGCGCGAACGCGCTCAAGATCTTCAGGGGTATCCACACCTGTGCCAGGAACTTCCTGAGCAACAGCAAAATAGATTTTTTCGCCGTACCCAAGAACACGAAGCTGCTCTAACATTTCGATGTGTTCTAACGGACTTGGCTGCCAGTTGAa  >  1:187116/1‑299                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          TGCTCATTTTGGCTGACAAACCAGCTCGTATCTCCTCGCGCTCAGACAGTGTCAGGTGAGCTACAGCCCGCTTACGCTCATGGGGTTTTATGCCGCCAGTATCCCTTAACATAGTGAAGATCGTTCCGGGTTTTGAACCCAGGATATTCGCTATTTCACTGAAGCCTGTTCCGTTCTTCCATAGTTCAAAAACAGAGGCTTTTTCCTCTGCTGTAAATGTTCGTCTCATTCAAAAAACCTCCGCAACCCCATGTTTTCACATAACTGTTGCGTTGACCAATTGAATCTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/270831‑270541 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ACTGCTTTCATAATGAGCGCCAATATAAAAGATGTCACCTGAATGAGATCAATTGTTGAAAAGAAAAATTGAGGAAAATCGTAACGGTACGACACTCCTCCCAAAATTGGCTGAAGTGTCGTGAAGTGAAATTAGCGCATTTCAGCGCGAACGCGCTCAAGATCTTCAGGGGTATCCACACCTGTGCCAGGAACTTCCTGAGCAACAGCAACATGGATTTTTTCGCCGTACCACAGAACACGAAGCTGCTCTAACATTTCGATGTGTTCTAACGGACTTGGCTGCCAGTTGAC  <  NC_000913/971729‑971437

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.