Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,097,1180CA34.4% 22.9 / 14.2 32intergenic (+289/+447)ycdU/serXuncharacterized protein YcdU/tRNA‑Ser
Reads supporting (aligned to +/- strand):  ref base C (4/17);  new base A (7/4);  total (11/21)
Fisher's exact test for biased strand distribution p-value = 1.98e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

GTGATAGGAAGTGACCAGATAATACATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGT‑CGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGAT  >  NC_000913/1096834‑1097401
                                                                                                                                                                                                                                                                                             |                                                                                                                                                                                                                                                                                           
gTGATAGGAAGTGACCAGATAATACATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTTCGGGCATCCCGCTCCCTGCGCTCACGGTCTGCCCAACTGGCTGT‑CGCCAGTTGTCGACCCCCGATCGGGGCtt                                                                                                                                                                                                                                                                              >  2:259785/1‑300 (MQ=255)
gTGATAGGAAGTGACCAGATAATACATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGT‑CGCCAGTTGTCGACCCCCGGTCGGGGCtt                                                                                                                                                                                                                                                                              >  2:422153/1‑300 (MQ=255)
  gATAGGAAGTGACCAGATAATACATATATGTTTTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCACTCCACCCACCCCACAGCCCACCCGCTCACTACGCCCACAGCCTGTCCAACCGGCTGT‑CGCAAGTTGTCGACCCCCGGTAGGGGCTtct                                                                                                                                                                                                                                                                            >  1:262964/1‑300 (MQ=25)
   aTAGGAAGTGACCAGATAATACATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGT‑CGCCAGTTGTCGACCCCCGGTCGGGGCTtctc                                                                                                                                                                                                                                                                           <  1:4737/300‑1 (MQ=255)
        tgcgagatgtgtataagagacaggTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGT‑CGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATccc                                                                                                                                                                                                                                                                      <  2:245298/277‑1 (MQ=255)
               aaggtaagaCATATATGTTCTGTGCGCTCTTGTGTAGGTTGATTGTTGACTGATGAACCAGACAGTTGAGGTGCGCGATTTCTCCTCGCCCTAACGGACGGGTGCGGGGTCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGT‑CGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGgtg                                                                                                                                                                                                                                                               <  1:12885/292‑1 (MQ=14)
               aagataggatatatatGTTCTGTACTCCCTGTCGCAGGTTGATTGGCGACTGACNAACCAGACATTTGATGTGTACGATTTCTCCTCGCCCCAACAGACGTGGGCGTGGGCACCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGTTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGNCCAACTGGCTGT‑CGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGgtg                                                                                                                                                                                                                                                               <  2:717495/290‑1 (MQ=14)
                   taataCATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGT‑CGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGtgtgtg                                                                                                                                                                                                                                                           >  1:667415/1‑300 (MQ=255)
                        cATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGANAAAAAAGCCCGTACTTTCGTACGAGCNCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCACCTGGCTGT‑CGACAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCAGGTGTGTGCAATa                                                                                                                                                                                                                                                      >  2:510760/1‑300 (MQ=255)
                        cATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGANAAAAAAGCCCGTACTTTCGTACGAGCNCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGT‑CGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATa                                                                                                                                                                                                                                                      >  2:510905/1‑300 (MQ=255)
                               gTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGT‑CGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATcccctgtctcttatacacatctccga                                                                                                                                                                                                                                               >  1:246429/1‑278 (MQ=255)
                               gTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCCGCGGGCCTCCCGCTCCCTACGTTCACGGTCTGTCCCCCTGGCTGT‑CGACAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCAACTGGTGTGTGTAGTATACGaaa                                                                                                                                                                                                                                               >  1:333678/1‑300 (MQ=18)
                               gTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGATGATAAAGGGATCTACGCCCCCAAATCGCCCCTCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTACAACTGGTTGT‑AGACAGTTGTAGAACCCAGGTAGGGGCTTCTCATCCCCCAGGTGTGTGCAATATACGaaa                                                                                                                                                                                                                                               >  1:469891/1‑300 (MQ=18)
                                     tACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGT‑CGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAg                                                                                                                                                                                                                                         <  1:417836/300‑1 (MQ=255)
                                             tGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGT‑CGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACt                                                                                                                                                                                                                                 <  1:499756/300‑1 (MQ=255)
                                                             ctacgggtgaaCCAGACAGTTGATGGTCACGATTTCCCCTCTCCCTAACAGGCGTGGTTGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGGACTTTCGGACGAGCTCTTCTTTAAATATGTCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCATTGCGTTCACGGTCTGTCCAACTGGCTGT‑CGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCtcttc                                                                                                                                                                                                                 <  2:655960/291‑1 (MQ=14)
                                                                                   aggtgCACGATTTCCCCCCGCCCTAACCGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAATCCCGTACTTTCGGACGAGCTCTTCTTTAAGTATGACGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGNCCAACTGGCTGG‑CGCCAGTTGTCGACCCCCGTGCGGGGCTTCTCGGCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTANGAGCTCTTCTTTAAATATGGCGGTGAggggg                                                                                                                                                                                           <  2:550677/298‑1 (MQ=14)
                                                                                       gCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGT‑CGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGAt                                                                                                                                                                                       <  1:723234/300‑1 (MQ=255)
                                                                                            atccccccTCGCCCTAACCGACGTGGGCAGAGGCACCCGTTGTGTGCAATATACGAAAAGAAAGCCCGGACGTTCGGATGAGCTCTTCGTTAAATAGGGCGGTTAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGTTCACTACTTTTGCGTTCTGTCCACCTTGTTGT‑CGCTGGTTGTCGACCCCCGTTCGTGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACt                                                                                                                                                                                  <  2:453404/296‑1 (MQ=14)
                                                                                                 cccTCGCTCTAATAGACGGGGGCGGGGGCACCCGGTGTGTGCAAGATACGAAAAAAAAGCTTGTACGTTCTTACGAGCTCTTCGTTAAAGATGGCGGGGAGGGGGGGATTGACCCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGTTCTGTCCAACTTGTTGT‑CGCCATTTGTCTACCCCCGTTCGTGTCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACtcgctt                                                                                                                                                                             <  2:113034/300‑1 (MQ=14)
                                                                                                       cccTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCCTCGCTCGCCCTGCGGGCAGCCCGCCCACTGCGTTCACGGTCTGTCCAACTGGCTGT‑CGACAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGAttcacacccccgatacg                                                                                                                                                                       >  1:461168/1‑285 (MQ=11)
                                                                                                          tAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTANTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACCCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCCGTCCAACTGGCTGT‑CGCCAGTTGTCGACCCCCGATCGGGGCTTCTCATCCCACCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACGTTTGTANGAGCTTTTCTTTAAATATGGCGGTGAGGGGGGGAttcgaccccccgctacgttt                                                                                                                                                                    >  2:721773/1‑282 (MQ=11)
                                                                                                                          gggCACCCGGTGTGTGCAATATACGAAAAAAAGGCCCGTACTTTCGTATGAGCTCTTCGTTAAAGATGGCGGTGAGGGGGGGATCGACGCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTTGCTGT‑CGCCATTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTc                                                                                                                                                    <  2:229920/300‑1 (MQ=11)
                                                                                                                                cctggttgtgtgatatatggaaggaaagttcGTACTTTTGGATGAGCTCTTCGTTAAAGGTGGTGGGGAGGGGGGGATTGATGCGCTTTGCTCGCCCTGTTGGCAGTCCGTTTGCTGCGTCCACGGTCGGTACAAC‑GGGTGTACGACAGTTTTCGACCCCCGTTCGGGGTTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCg                                                                                                                                              <  1:679803/270‑1 (MQ=2)
                                                                                                                                     gtgtgCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGT‑CGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCAc                                                                                                                                         <  1:225272/300‑1 (MQ=34)
                                                                                                                                        tgCAAGATACGAAAAAAAAGCCCGTACTTTTGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTTGCTCGCCCTGCGGGCAGCCCGTTCACTGCGTTCACGGTCTGTCCAACTGGCTGT‑CGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGt                                                                                                                                      <  1:74729/300‑1 (MQ=19)
                                                                                                                                                 cGAAAAAAAAGCCCGGACGTTCGTACGAGCTCTTCGTTAAAGATGACGGTGAGGGGGGGATCGACTCGCTTCACGCGCCCTGCGGGAAGCCAGCTCGCGGCGTGAAAAGTAGGTCAAACGGGCGGG‑CGCCAGTTGTCGACCCCCATTCGGGGCTTCTTATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTGTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAAc                                                                                                                             <  2:136276/300‑1 (MQ=11)
                                                                                                                                                   aaaaaaaaGCCCGTACTTTCGGACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGT‑CGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTg                                                                                                                           <  1:147251/300‑1 (MQ=17)
                                                                                                                                                                       gTACGAGCTCTGCGTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGTGGGCATCCCGCTCGCTGCGTTCGCGGTCTGTCTAACTTGCTTT‑CGCCAGTTTTCGACCCCCGTGCGTGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAAc                                                                                                       <  2:447503/300‑1 (MQ=11)
                                                                                                                                                                         aCGAGCTCTTCTTTAAAAATGGCGTGGAGGGGGGGATTGACTTGCTTCTCTCTCCCTGCGGTCAGCCAGTTCACTTTTTTCATGTCCTGTCCACCTGG‑TGTTCGCCATTTTTCAACCCCCGTTTGGGGCTTCTCACCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCTTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTTTCGCCAGTTGTCGAAccc                                                                                                     <  1:782/300‑1 (MQ=11)
                                                                                                                                                                                                                                         gCCCGCTCGCTGCGTTCACGGTCTGGCCAACTGGCTGG‑CGCCAGTTGTCGACCCCCGTTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATTGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTAc                                     <  1:342997/300‑1 (MQ=12)
                                                                                                                                                                                                                                                                             ttgcGCCAGTTGTCGGCCCCCGTTCGTGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAATCCCGTACTTTCGTACGAGCTCTTCTTTAAATATTGCGGTGAGGGGGGGATCGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCAAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGAt  <  1:578494/297‑1 (MQ=11)
                                                                                                                                                                                                                                                                                             |                                                                                                                                                                                                                                                                                           
GTGATAGGAAGTGACCAGATAATACATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGT‑CGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGAT  >  NC_000913/1096834‑1097401

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑