New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 78144644 (0.490)6 (0.090) 6/442 5.1 14.2% intergenic (+2/‑131) lysZ/lysQ tRNA‑Lys/tRNA‑Lys
?NC_000913 781655 = 40 (0.610)intergenic (+3/‑430) lysQ/nadA tRNA‑Lys/quinolinate synthase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACA  >  NC_000913/781163‑781744
                                                                                                                                                                                                                                                                                           |                                                                                                                                                                                                                                                                                                              
tGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAACCTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAACTCTTTAAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGCCTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTg                                                                                                                                                                                                                                                                                               >  2:242785/1‑300 (MQ=255)
     gagCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCCTACAGATTGACCCAGAGTAAACATCTTTACGGTACCACCCGTCTGGGTCGTTCGCTCAGTTGGTCGAGCAATTGACTCTTAAGCAATTGGTAGCAGGTTCGAATCCGGCACGAAACGCCAATGTAAAGGGAGTTACTGGCaga                                                                                                                                                                                                                                                                                          >  2:308928/1‑300 (MQ=18)
      agcaatcgACTTTTAATCAATTGGTCGCATTTTCGAACCCTGCACTACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTTAAGGATAACGTTGCGCCAGCAACGGCCCTTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCCTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTagag                                                                                                                                                                                                                                                                                         <  2:542730/293‑1 (MQ=38)
      agCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTagag                                                                                                                                                                                                                                                                                         <  1:543704/300‑1 (MQ=255)
        cggTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGGCAGATGTTAAGCGGGTAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGaa                                                                                                                                                                                                                                                                                       <  1:187342/298‑1 (MQ=255)
        cAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCCTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGaa                                                                                                                                                                                                                                                                                       <  1:187246/300‑1 (MQ=255)
               cTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTTCACGCCCCCCCAATCTTAAAGATTGGCACAGAGTAAAAATCTTTCAGGTAACACCCGTCTGGGTCGTTAGCTCAGTTGGTAGCGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATTCTGCACGACCCACCAATGTAAAgaagcgcaataagggcgcttttttgc                                                                                                                                                                                                                                                                                >  2:109748/1‑275 (MQ=25)
                     aTCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAAc                                                                                                                                                                                                                                                                          <  1:172709/300‑1 (MQ=255)
                                            cctacACGACCCACCAGCTTTAACATCAAACCCAAATGTTAAGCGTTAAGGATAACGTTGCTTCAGTGACTGCCCGTAGTGCAAGCGGAGCGAGGCATCCTGTATGACCCGCCGATCGTAAAGATTGGCTCCTCGTGGAAATCTTTTAATCAACACCCGCCCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAg                                                                                                                                                                                                                                                   <  2:373845/296‑1 (MQ=16)
                                                    aCCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCACGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCACTCTTACAGATTGGCCCCNAGTAAAAATCTTTCAGGTAACACCCGNATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACGTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGAACCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCACGAAGGGCGAGAc                                                                                                                                                                                                                                           >  2:455283/1‑300 (MQ=255)
                                                     cccACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGACAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCGTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAAACg                                                                                                                                                                                                                                          <  1:648551/300‑1 (MQ=255)
                                                                   cATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCNAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACGGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATcc                                                                                                                                                                                                                           <  1:463264/300‑1 (MQ=255)
                                                                   cATCAAACGCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCTAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTTAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATcc                                                                                                                                                                                                                           <  1:263923/300‑1 (MQ=255)
                                                                        atctcagacattagtctttaaGGATAACGGTGCGCCAGCAACGCCCCTTAGTGTGAGCTAAGCGATTCATCCTGTACGACCCCCCACTCCTAAAAATTGGCCCCGAGTACAAATCCTTCAGTCACCACCCGCCTTGGTCGTTAGCTCATTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCGGCAAGATCCACCAATTTAAAGGTGGTTACTGGGAGGGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCAc                                                                                                                                                                                                                      <  2:238892/281‑1 (MQ=16)
                                                                                  ttAAGCGTGGAGTATAACGTTGCGCCAGTAACGGCCCGGAGGGCGAGCGAAGCGAGTCATCTTGTACGACCCACCAATCTTAAAGATTGGACCCGAGTAAAAAGCTTGCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCAt                                                                                                                                                                                                           <  2:445799/300‑1 (MQ=25)
                                                                                         tGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAAt                                                                                                                                                                                                    <  1:244080/300‑1 (MQ=255)
                                                                                             ggATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAACATCTTTCAGGTAACACCCGTATGAGTCGTTAGCTCAGTTAGTAGAGCAGTTGACTTTTCCTCAATTGGTCGCAGGTTCGAATCCTGCACGAACCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCGACGGTCAGAAGGGCGAGACGAAGTCGAGTAGTCCTGCACGGACCGCCATCCTGAATgctt                                                                                                                                                                                                >  2:89344/1‑297 (MQ=255)
                                                                                             ggATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGAtt                                                                                                                                                                                               >  1:350562/1‑300 (MQ=255)
                                                                                                  aCGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCAGAGTAAAAATCTTTCAGGTAACAACCGTATGGGTCGTTGGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGAACCACCAATTTAAAGGCGTTTACTGATAGAGAACGTGTAAGATAAAGTTGCATTAGAGATGGCCCGAAGGGAGAGATGGAGTCGGGTAATCATGCACGaacaaacctactgagtgattaagga                                                                                                                                                                                            >  2:2850/1‑276 (MQ=25)
                                                                                                       gcgtcAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACCGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCAAGACGACGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCAt                                                                                                                                                                                     >  2:675432/5‑300 (MQ=255)
                                                                                                            aGCAACGGCCCGGAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAACCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTTGTATAGCAGTTGACTTTTAATCAATTGTTCGCAGGTTCGAATCCTGTACGATTCACTAAGGTGAATGTGGTGACTGGTAGAGAACGTGGAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATcc                                                                                                                                                                                <  1:215818/300‑1 (MQ=37)
                                                                                                                    cccGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAggg                                                                                                                                                                        >  1:183070/1‑300 (MQ=255)
                                                                                                                          aatcggtcgaaggggcgaaTCCTGCACGACCCACCGATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGtt                                                                                                                                                                  <  2:83458/282‑1 (MQ=255)
                                                                                                                                        attCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGACTAAAAATCTTTCAGGTAACACCCGCATGGTTCGTTAGCTCATTCGGTATAGCAGTTTACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCACTTTAACAGCGGCTACTGGTAGAGAACGTGGAGGATAACGCTGCTTTGGTAACGGTCCGGAGGTCTAGGCGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTag                                                                                                                                                    <  1:309506/298‑1 (MQ=255)
                                                                                                                                            aTCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATACTCCCGCAAGAAATCGTTAGTTCAGTTGGTAGAGcc                                                                                                                                                >  2:9920/1‑299 (MQ=255)
                                                                                                                                            aTCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCACGAAGGGCGAGACGCAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCAGCAAGAGGTCGTTAGCTCAGTTGGTAGAGCa                                                                                                                                                >  1:46787/1‑300 (MQ=255)
                                                                                                                                            aTCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTAGTAGCGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGACGGGTGAGACGAAGTCGATTCATCCTGCACGACCCACCATCCTGAATGATTAAGACAGCATAATCCCGCAAGGGGTCGTTAGTTCAGTTGGTagcgaa                                                                                                                                                >  2:442421/1‑296 (MQ=37)
                                                                                                                                               cTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAACTCTTTCCGGTAACACCCATATGGGTCATTAGCTCAGTTGGTAGAGCAGTTGAATTTTCATCCCTTGGTCGCAGGTTCGAATCCTGCACGCCTCACCAATTTAAAGGTGTTTACTAGTAGAGAACGTGCAGGATAACATTGCGTTAGCACTGGCCAGCAGGGCGAGACGAAGTCGAGTCATCCCGCACACACCACCATCCTTACTGCTCAAATCAGCATAATCCCTCAAAGGGtagctctctcaggtcgtcaggcagtc                                                                                                                                             >  2:95167/1‑275 (MQ=255)
                                                                                                                                                      aCCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACtttt                                                                                                                                      >  1:326167/1‑300 (MQ=255)
                                                                                                                                                              aTCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCACGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAAtt                                                                                                                              >  1:311099/1‑300 (MQ=255)
                                                                                                                                                                                        aTCTTTCAGGTAACACCCGTATTGTTCGTTAGCTCAGTTGGTAGAGCATTTGACTTTTAATCAATTAGTCGCAGTTTCGAACCCTACACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTTAAGGATAATGGTGTGTTAGTAGATGTTTGGAGGGTGAGGCGGAGTGGATTAATAATGCGAGACATATGATCCGAGGGAAGGAAGGCAGTGTAACACCACAATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGAc                                                                                                    <  1:332547/300‑1 (MQ=9)
                                                                                                                                                                                        aTCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGAc                                                                                                    <  1:688614/300‑1 (MQ=255)
                                                                                                                                                                                            ccgtcatcacccaccaccgggTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCCATTTCACAATTGTCCACGTCCGCGAACAGGACGGATAACTTTGAGTTAGCAACGGCCCGGCGGGAGAGGCGAAGTGGGGTCGTCTTGCATGACCCACCATCCTGAATGATTGAGGCAGTATAATCACGCAAGGGGTCGTTAGCTCAGTTGGTCGAGCAGTTGATTTTTAATCAATTGGCCGCCGGTTCGAATCCTGcgtgacctat                                                                                                >  1:114252/19‑291 (MQ=9)
                                                                                                                                                                                                ggTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCAACCATCCTGAATGATTAAGGCAGCATAATCCCGCCAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGAACCACCAAt                                                                                            >  1:630201/1‑300 (MQ=255)
                                                                                                                                                                                                     cacCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTaaa                                                                                       >  1:65227/1‑300 (MQ=255)
                                                                                                                                                                                                           tATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAgcg                                                                                 >  1:447850/1‑300 (MQ=255)
                                                                                                                                                                                                                   gTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAAGTGGTTACTGGTAGCGACCGTGCAAGATACCGTCGCATTAGCAACGGCCCGACGGACGAGACGAAATCGAGTCATCCTGCACGAACCANCCTGCTGACTGATCAAGACAGCATAATCCCGTACGGGGTCATTCGTTCAGTTGGTAGCGCAGTTAACCTTTAATCCATTGGTAGTCGGTTCGCATCCTGCCCGACCAAACAATATAAAGAAACGCCCTacgg                                                                         >  2:149929/1‑297 (MQ=16)
                                                                                                                                                                                                                    tcaGCTNAGTTGGTAGAGCCATTGACTTTTACTCAATTGGTCGCAGGTTCGAATNCGGCACGACCCACAAATTTAAAGGCGGTGGATGGGAGAGAATGTGAAGGAGGAAGTTGCGTTAGCAGCGGACCGAAGGGTAAGCCGAGAGAGAATCACCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAgg                                                                        <  2:570138/298‑1 (MQ=21)
                                                                                                                                                                                                                            gTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGACCGTGCAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGNAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTACTCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCATAAAGGCGCttttt                                                                >  1:463629/1‑300 (MQ=255)
                                                                                                                                                                                                                            gTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCACGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGCTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCttttt                                                                >  1:594610/1‑300 (MQ=255)
                                                                                                                                                                                                                              tGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAACGGCGCTTTTTTg                                                              >  1:115524/1‑300 (MQ=255)
                                                                                                                                                                                                                                                                 ggTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGCAGGATAACGTTGCGTTAGCAACGGCACGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGAACCACCCTCCTAAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGNTCAGTTGATAGAGCCGTTGACTTTTACTCAATTGGTCGCCGGTTCGAATCCTGCACGCCCCACCCCTGTCCCAAAGCGCCATCAAGGTGTTCTTTTGTTATCTTCGATGCTCACATATTTGAACCTgcatcg                           >  2:160662/1‑297 (MQ=255)
                                                                                                                                                                                                                                                                        aTCCTGCACGACCCACCAATTTAAAAGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCAGAAAGGGGTCGTTAGCTCAGTTGGTAGGGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGACCTGAAGGCGCTTTTCTGCTATCTGCGATACTCAAAGATTCGAAcactcaacagggttga                    >  2:282503/1‑285 (MQ=37)
                                                                                                                                                                                                                                                                            tgcacaatccccaactttAAATGTGGTGATTTGTAGAGAACGTGAAGGATAGCGTTGCGTTAGCAACGGTCCGAAGGTCTAGACGAAGGCGAGTCACCCTGCACGACCCATTATCCTGAATGAGTGAGACAGCATAATCCCGCAATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTttgagttg                <  1:94408/285‑1 (MQ=18)
                                                                                                                                                                                                                                                                                          aTTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCACGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGGTTCGAACCTGCAGCAGGTTTGAGTTGAGCGTAGCGAaaca  >  2:597256/1‑300 (MQ=255)
                                                                                                                                                                                                                                                                                           |                                                                                                                                                                                                                                                                                                              
TGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACA  >  NC_000913/781163‑781744

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.