New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1287084	43 (0.490)	3 (0.040)	3/558	7.4	7.0%	noncoding (153/171 nt)	rttR	small RNA RttR
	?	NC_000913	1287557 =	40 (0.490)					noncoding (66/85 nt)	tyrT	tRNA‑Tyr
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GCGCTCAAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCTTGGGCAGAATATTTGATTGCGGATTCGTTTGAGAATTCCGGGGCTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTG‑CGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTT‑GGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCA‑GGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTGGGG  >  NC_000913/1286787‑1287373                                                                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                                                                     gcgatCAAGCCGAACCTTGTTCGAAGCTTCGCACCCTTCCCCGCTTGGGCAGAATATTTGATTGCGGATTCGTTTGAGAATTCCGGGGCTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGTGCGCTTCGCCCTTCGGGTTGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTATTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTTAGAGTTCAGGGACTTTTGAAAGTGATGGTGGGGGGGGAAGGATTAc                                                                                                                                                                                                                                                                                                    <  2:56011/296‑1 (MQ=17)   gcTCAAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCTTGGGCAGAATATTTGATTGCGGATTCGTTTGAGAATTCCGGGGCTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTc                                                                                                                                                                                                                                                                                                  >  1:585762/1‑300 (MQ=255)   gatCAAGTCGAACTTGGGGCGAAGTTTCGCATCCTTACCCGTGTGGGCGGAATATGTAATTACGGATTCGTTGTAGAGTTCCGTTGTTTGGGGAAGTGATGGTGGTGGGGGAANGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTNACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTc                                                                                                                                                                                                                                                                                                  <  2:555379/298‑1 (MQ=14)      cAAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCTTGGGCAGAATATTTGATTGCGGATTCGTTTGAGAATTCCGGGGCTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAgc                                                                                                                                                                                                                                                                                               <  1:659179/300‑1 (MQ=255)        aGTCGAACCTTGTTCGAAGCTTCTCATCCTTCCCCGCTTGGGCAGAATATTTGATTGCGGATTCGTTTGAGAATTCCGGGGCTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAgcgc                                                                                                                                                                                                                                                                                             <  1:313537/300‑1 (MQ=255)             acctttGGTCGGAGCTTCTCATCCTTCCCCGCTTGGGCAGAATATGTGATTGCGGATTCGTTTGAGACTTCCGGGGCTTGTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTg‑cgc                                                                                                                                                                                                                                                                                       <  2:393657/296‑1 (MQ=255)                         aGCTTCTCATCCTTCCCCGCTTGGGCAGAATATTTGATTGCGGATTCGTTTGAGAATTCCGGGGCTTTTGAAAGTGATGGTGGTGGGGTAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTcctgtctcttatacacatctcgc                                                                                                                                                                                                                                                                            <  1:547261/300‑23 (MQ=255)                                            cTTGGGCAGAATATTTGATTGCGGATTCGTTTGAGAATTCCGGGGCTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTG‑CGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCaa                                                                                                                                                                                                                                                        <  1:78876/300‑1 (MQ=255)                                                                          ttGAGAATTCCGGTGCTTTTGAAAGTAATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTG‑CGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCt                                                                                                                                                                                                                          <  1:246165/300‑1 (MQ=255)                                                                                          ttttGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTAATCCTTCCCCGCATGGGCAGAATATTTGATTTCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTAATCAGCGCTG‑CGCGCTTCGCCCTTAGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGTTCGAAGCCTCTCa                                                                                                                                                                                                          >  1:62729/1‑300 (MQ=255)                                                                                            gtGAAAGTGATGTTGGTGGGGGAAGGACTACCCAACGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTG‑CGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATc                                                                                                                                                                                                        <  1:554606/299‑1 (MQ=255)                                                                                            gcgAAATTGATGTTGTTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCTGTTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCGTGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTG‑CGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATc                                                                                                                                                                                                        <  1:554757/298‑1 (MQ=255)                                                                                                  gTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACCCAACGCTA‑CGCGCGTCGCCCTTCGGGTCGTTGCCTACAGCCCCGCCCTCTCGCTGGCGCCCGCGTCGAACCTTGGTCGAAGCTTCTAATCCTTccc                                                                                                                                                                                                  >  2:588828/1‑300 (MQ=17)                                                                                                       ggtggtggGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGACACTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTG‑CGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCAt                                                                                                                                                                                             <  1:336124/300‑1 (MQ=255)                                                                                                                gtaaGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCCTAGTCGAAGCTTCTCATCCTTCCCCGCATGGTCAGAATATTGGATTGCGGATTCGCTTGAGAGTTCAGGGACTTGTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTG‑CGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAat                                                                                                                                                                                    <  1:235883/298‑1 (MQ=255)                                                                                                                              gcgcTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTG‑CGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGAt                                                                                                                                                                      >  1:263044/1‑300 (MQ=255)                                                                                                                              gcgcTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTG‑CGCGCTTCGCCCTTAGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGAAGAATATTTAATTGCGGAt                                                                                                                                                                      >  1:262346/1‑300 (MQ=255)                                                                                                                                                                cGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTG‑CGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGGCGAAGCTTCTCATCCTTCCCCGCATGGNCAGAATATTTAATTGCGGATTCGTT‑GGGAAGTTCAGGGACTTTTGAAAGTGAtg                                                                                                                                   >  2:503533/1‑300 (MQ=255)                                                                                                                                                                            ctcGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCCGCGCTG‑CGCGCTTCGCCCTTCGGGTCGCTGCCTACGGCAACGCTCTCTCGCTGACGCTCGAGTCGAACATTGGTCGACGGTTCTCACCCTTCCCCTCATAGGGAGAATACTTACTCGCGGACTCGTG‑GGGCCGCTCAAGTACTTTTGACAGTGGTGGTGGTgggggca                                                                                                                       >  2:90233/1‑298 (MQ=17)                                                                                                                                                                               gCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACCCCGTGCGA‑CGCTCCTCACCATCAGGGTCGGGGCCTACAACCCCGCCCTCTCGCTAACACCCAAGTCGAGCCTTGGTCGAGGCTTCTACTCCTTCCCCTCATGGGGATAATCTTTATCTGCGGATCTGCT‑GGGCCGTTCAGGGACTTTTGCAAGTGATGGTGGTGGaggaagga                                                                                                                    >  2:395916/1‑300 (MQ=9)                                                                                                                                                                                    cGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTG‑CGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTT‑GGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGa                                                                                                               >  1:248096/1‑300 (MQ=255)                                                                                                                                                                                         gAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTG‑CGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTT‑GGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCtt                                                                                                          >  2:288342/1‑300 (MQ=255)                                                                                                                                                                                                                   aTCCTTCCCCGCATGTGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTG‑CGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTT‑GGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAg                                                                                <  1:513793/300‑1 (MQ=255)                                                                                                                                                                                                                                    cAGAATATTTGATTGCGGATTCGCTTGAGAGTTCATGGACTGTTGAAAGTGATGGTGGGGGGGGAAGGATTACTCAGCGCTG‑CGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTT‑GGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCg                                                               <  1:601614/300‑1 (MQ=255)                                                                                                                                                                                                                                        atatTTGATTGCGGATTCGCTTGAGAGTTCANGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTG‑CGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTNGCGCTCGAGTCGAACCTTGGTCGAAGGTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTT‑GGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGACGTCGATGACGGCAGATTTCCAGTCTGCTCCCTTTGGGCGCTCg                                                           >  2:482962/1‑300 (MQ=255)                                                                                                                                                                                                                                        atatTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTG‑CGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTT‑GGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCg                                                           >  2:117939/1‑300 (MQ=255)                                                                                                                                                                                                                                                        ttgCTTGAGAGTTTATGGGCTTTTGAGAGGGATGGTGGGGGGGGAAGGATTACTCAGCGCTG‑CGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTT‑GGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCA‑gggg                                          <  2:311812/298‑1 (MQ=255)                                                                                                                                                                                                                                                        tCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTG‑CGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTT‑GGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCA‑gggg                                          <  1:431231/300‑1 (MQ=255)                                                                                                                                                                                                                                                        gagtaacaggttttggttatttaaggaagcgATGGTGGTGGGGGAAGGATTACTCAGCGCTG‑CGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCAAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCTTGGGCAGAATATTTGATTGCGGATTCGTTTGAGAA‑TTCCGGGGCTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCA‑gggg                                          <  2:383992/270‑1 (MQ=11)                                                                                                                                                                                                                                                        gagtaacaggttttgattatttaaggaagcgATGGTGGTGGGGGAAGGATTACTCAGCGCTG‑CGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCAAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTT‑GGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCA‑gggg                                          >  2:588559/31‑300 (MQ=17)                                                                                                                                                                                                                                                          gCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTG‑CGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTT‑GGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCA‑GGGGTa                                        >  1:580934/1‑300 (MQ=255)                                                                                                                                                                                                                                                               agagTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGTAAGGATTACTCAGCGCTG‑CGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGAAGAATATTTAATTGCGGATTCGTT‑GGGAAGTTTAGGGACTTTTGAAGGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGCCGATGACAGCAGATTTACCGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACAA‑GGGGTGATTcc                                   >  1:529722/1‑299 (MQ=21)                                                                                                                                                                                                                                                                                  caGTGATGGTGGGGGGGGAAGGATTACTCAGCGCTA‑CGCTCTTCGCCCTTCGGGTTGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTT‑GGGAAGTTCAGGGACTTTTGAAAGTGATGTTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCA‑CGGGttaatgctttttactggcctgctccc                <  2:422256/299‑26 (MQ=21)                                                                                                                                                                                                                                                                                    gcgATGGTGGTGGGGGAAGGATTACTCAGCGCTG‑CGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTT‑GGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCA‑GGGGTAATTCAAATTTTGAGGTAATGCTTgag              <  1:553514/298‑1 (MQ=255)                                                                                                                                                                                                                                                                                     tGATGGTGGTGGGGGAAGGATTACTCAGCGCTG‑CGCTCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTT‑GGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAAGGGGTAAtgctttttactggcctgctcccctg              >  1:430267/1‑276 (MQ=21)                                                                                                                                                                                                                                                                                      gATGGTGGTGGGTGAAGGATTACTCAGCGCTG‑CGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTT‑GGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCA‑GGGGTAATTCAAATTTTGAGGTAATGCTTGAGAt            <  1:77836/300‑1 (MQ=255)                                                                                                                                                                                                                                                                                        tggtggtggGGGGAGGATTGCTCGGCG‑TGACGCGCTTCGCCCGTCGGGTCGTTGCCTGCGGCGACGCTCTCTCGCTGGCGCTCGGGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTT‑GGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCA‑GGGGTAATTCAAATTTTGAGGTAATGCTTGAGAtgg          <  2:212091/300‑1 (MQ=25)                                                                                                                                                                                                                                                                                         ggtggtggGGGAAGGATTACTCAGCGCTG‑CGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGTT‑GGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCA‑GGGGTAATTCAAATTTTGAGGTAATGCTTGAGAtggt         >  2:669367/1‑300 (MQ=255)                                                                                                                                                                                                                                                                                           tggtggGGGAAGGATTACTCAGCGCTG‑CGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGTT‑GGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCA‑GGGGTAATTCAAATTTTGAGGTAATGCTTGAGAtggtgg       <  1:685987/300‑1 (MQ=255)                                                                                                                                                                                                                                                                                                gggtgaGGATTACTCAGCGCTG‑CTCACTTCGTCCTTCGGGTCGTTGCCTGCGGCAGCGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTT‑GGGAAGTTCAGGGACTTTTGAAAGTGAGGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCTACCA‑GGGGTAATTCAAATTTTGAGGTAATGCTGGAGATGGTGGTgggg  <  2:19661/295‑1 (MQ=25)                                                                                                                                                                                                                                                                                                ggggAAGGATTACTCAGCGCTG‑CGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTT‑GGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCA‑GGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTgggg  <  1:668911/300‑1 (MQ=255)                                                                                                                                                                                                                                                                                                ggggAAGGATTACTCAGCGCTG‑CGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCAAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTT‑GGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCA‑GGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTgggg  <  1:601343/300‑1 (MQ=255)                                                                                                                                                                                                                                                                                                ggggAAGAAGTACTCAGCGCTG‑CGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTT‑GGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCA‑GGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTgggg  <  2:301139/300‑1 (MQ=255)                                                                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                                                                     GCGCTCAAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCTTGGGCAGAATATTTGATTGCGGATTCGTTTGAGAATTCCGGGGCTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTG‑CGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTT‑GGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCA‑GGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTGGGG  >  NC_000913/1286787‑1287373

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.